HEADER PROTEIN TRANSPORT 19-JUL-17 5WIC TITLE TRAE PROTEIN IN COMPLEX WITH 2-FUROIC ACID (FOA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONJUGAL TRANSFER PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 70-232; COMPND 5 SYNONYM: CONJUGAL TRANSFER PROTEIN TRAE,TRAE,TRAE PROTEIN,INNER COMPND 6 MEMBRANE PROTEIN FORMS CHANNEL FOR TYPE IV SECRETION OF T-DNA COMPND 7 COMPLEX,VIRB8,TYPE IV SECRETION OF T-DNA VIRB8,TYPE IV SECRETION COMPND 8 SYSTEM PROTEIN VIRB8; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: TRAE, B634_00049, BE957_00530, ECONIH1_27615, PEC386IL_00125, SOURCE 5 PECNDM0_00049, PHKU1_33, PKC394-028, PKC396-021, PMUR050_041, SOURCE 6 PN3_023; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: BL21(DE3)STAR; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHT KEYWDS TYPE IV SECRETION SYSTEM, FRAGMENT-BASED DRUG DESIGN, COMPLEX, KEYWDS 2 INHIBITOR, ANTIMICROBIAL RESISTANCE, BACTERIAL SECRETION, VIRB, KEYWDS 3 PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR B.CASU,T.ARYA,B.BESSETTE,C.BARON REVDAT 3 04-OCT-23 5WIC 1 REMARK REVDAT 2 08-JAN-20 5WIC 1 REMARK REVDAT 1 15-NOV-17 5WIC 0 JRNL AUTH B.CASU,T.ARYA,B.BESSETTE,C.BARON JRNL TITL FRAGMENT-BASED SCREENING IDENTIFIES NOVEL TARGETS FOR JRNL TITL 2 INHIBITORS OF CONJUGATIVE TRANSFER OF ANTIMICROBIAL JRNL TITL 3 RESISTANCE BY PLASMID PKM101. JRNL REF SCI REP V. 7 14907 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 29097752 JRNL DOI 10.1038/S41598-017-14953-1 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 24153 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1255 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7755 - 5.3003 1.00 2721 150 0.2032 0.2650 REMARK 3 2 5.3003 - 4.2086 1.00 2629 144 0.1778 0.2215 REMARK 3 3 4.2086 - 3.6771 1.00 2591 142 0.2082 0.2776 REMARK 3 4 3.6771 - 3.3411 1.00 2580 142 0.2422 0.2902 REMARK 3 5 3.3411 - 3.1017 0.99 2535 141 0.2702 0.3464 REMARK 3 6 3.1017 - 2.9189 0.98 2553 139 0.2787 0.3380 REMARK 3 7 2.9189 - 2.7728 0.97 2474 135 0.2802 0.2944 REMARK 3 8 2.7728 - 2.6521 0.95 2450 137 0.2724 0.3215 REMARK 3 9 2.6521 - 2.5500 0.92 2365 125 0.2693 0.3092 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4689 REMARK 3 ANGLE : 0.684 6356 REMARK 3 CHIRALITY : 0.028 682 REMARK 3 PLANARITY : 0.003 825 REMARK 3 DIHEDRAL : 12.594 1752 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000229079. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24153 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 38.771 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15200 REMARK 200 FOR THE DATA SET : 5.7800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.9_1692 REMARK 200 STARTING MODEL: 5I97 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% (W/V) PEG 10,000, 50 MM BIS-TRIS REMARK 280 (PH 5.5), 100 MM AMMONIUM ACETATE, PH 7.4, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.03800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.03800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 55.65900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.88300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 55.65900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.88300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.03800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 55.65900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.88300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.03800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 55.65900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 61.88300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 70 REMARK 465 HIS A 71 REMARK 465 LEU A 72 REMARK 465 LEU A 73 REMARK 465 THR A 74 REMARK 465 LEU A 75 REMARK 465 ASN A 76 REMARK 465 GLU A 77 REMARK 465 ALA A 78 REMARK 465 THR A 79 REMARK 465 HIS A 80 REMARK 465 GLU A 81 REMARK 465 VAL A 82 REMARK 465 GLN A 83 REMARK 465 GLN A 84 REMARK 465 VAL A 85 REMARK 465 LYS A 86 REMARK 465 LEU A 87 REMARK 465 VAL A 231 REMARK 465 ASN A 232 REMARK 465 ALA B 70 REMARK 465 HIS B 71 REMARK 465 LEU B 72 REMARK 465 LEU B 73 REMARK 465 THR B 74 REMARK 465 LEU B 75 REMARK 465 ASN B 76 REMARK 465 GLU B 77 REMARK 465 ALA B 78 REMARK 465 THR B 79 REMARK 465 HIS B 80 REMARK 465 GLU B 81 REMARK 465 VAL B 82 REMARK 465 GLN B 83 REMARK 465 GLN B 84 REMARK 465 VAL B 85 REMARK 465 LYS B 86 REMARK 465 LEU B 87 REMARK 465 THR B 88 REMARK 465 VAL B 231 REMARK 465 ASN B 232 REMARK 465 ALA C 70 REMARK 465 HIS C 71 REMARK 465 LEU C 72 REMARK 465 LEU C 73 REMARK 465 THR C 74 REMARK 465 LEU C 75 REMARK 465 ASN C 76 REMARK 465 GLU C 77 REMARK 465 ALA C 78 REMARK 465 THR C 79 REMARK 465 HIS C 80 REMARK 465 GLU C 81 REMARK 465 VAL C 82 REMARK 465 GLN C 83 REMARK 465 GLN C 84 REMARK 465 VAL C 85 REMARK 465 LYS C 86 REMARK 465 LEU C 87 REMARK 465 THR C 88 REMARK 465 ARG C 89 REMARK 465 ASP C 90 REMARK 465 GLN C 91 REMARK 465 THR C 92 REMARK 465 SER C 93 REMARK 465 VAL C 231 REMARK 465 ASN C 232 REMARK 465 ALA D 70 REMARK 465 HIS D 71 REMARK 465 LEU D 72 REMARK 465 LEU D 73 REMARK 465 THR D 74 REMARK 465 LEU D 75 REMARK 465 ASN D 76 REMARK 465 GLU D 77 REMARK 465 ALA D 78 REMARK 465 THR D 79 REMARK 465 HIS D 80 REMARK 465 GLU D 81 REMARK 465 VAL D 82 REMARK 465 GLN D 83 REMARK 465 GLN D 84 REMARK 465 VAL D 85 REMARK 465 LYS D 86 REMARK 465 LEU D 87 REMARK 465 THR D 88 REMARK 465 ARG D 89 REMARK 465 ASP D 90 REMARK 465 GLN D 91 REMARK 465 THR D 92 REMARK 465 SER D 93 REMARK 465 VAL D 231 REMARK 465 ASN D 232 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS D 170 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLY D 95 HZ1 LYS D 168 1.28 REMARK 500 HH TYR D 137 O HOH D 301 1.29 REMARK 500 OD1 ASP C 153 HH21 ARG C 184 1.38 REMARK 500 H VAL B 159 O HOH B 405 1.43 REMARK 500 OE2 GLU B 202 HE ARG B 221 1.45 REMARK 500 HH22 ARG A 89 O HOH A 303 1.45 REMARK 500 H LEU C 218 O HOH C 302 1.48 REMARK 500 OE2 GLU A 202 HE ARG A 221 1.52 REMARK 500 HD21 ASN D 216 O PHE D 220 1.54 REMARK 500 HH TYR C 113 O GLY C 152 1.59 REMARK 500 O LEU C 151 OG SER C 154 1.76 REMARK 500 O HOH B 431 O HOH B 440 1.82 REMARK 500 O HOH A 320 O HOH A 341 1.97 REMARK 500 O HOH A 318 O HOH A 326 1.97 REMARK 500 O HOH B 436 O HOH B 441 1.98 REMARK 500 OG1 THR C 104 O HOH C 301 1.99 REMARK 500 OH TYR D 137 O HOH D 301 2.02 REMARK 500 O HOH A 328 O HOH A 344 2.03 REMARK 500 O HOH B 433 O HOH B 435 2.03 REMARK 500 O VAL B 150 O HOH B 401 2.06 REMARK 500 O HOH B 413 O HOH B 428 2.08 REMARK 500 OD1 ASP A 190 O HOH A 301 2.11 REMARK 500 O HOH A 315 O HOH A 342 2.11 REMARK 500 O HOH A 333 O HOH A 343 2.11 REMARK 500 O HOH B 421 O HOH B 429 2.13 REMARK 500 OD1 ASP C 153 NH2 ARG C 184 2.14 REMARK 500 O HOH B 437 O HOH B 439 2.14 REMARK 500 OE1 GLU B 230 O HOH B 402 2.16 REMARK 500 OD2 ASP D 96 O HOH D 302 2.17 REMARK 500 NH2 ARG D 213 O PRO D 217 2.18 REMARK 500 O TYR B 203 O HOH B 403 2.18 REMARK 500 OH TYR A 137 O HOH A 302 2.19 REMARK 500 O HOH A 327 O HOH A 340 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 109 NE2 HIS A 109 CD2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 229 C - N - CD ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 209 -162.88 -76.63 REMARK 500 SER B 117 16.13 -142.16 REMARK 500 PHE C 141 73.32 -112.56 REMARK 500 ALA C 207 -174.10 -68.78 REMARK 500 GLU C 211 -47.58 -165.75 REMARK 500 VAL C 215 -60.73 -132.03 REMARK 500 VAL D 150 -61.80 -93.92 REMARK 500 LYS D 204 88.41 -150.00 REMARK 500 LEU D 206 -118.58 -99.57 REMARK 500 ALA D 207 91.67 -63.36 REMARK 500 VAL D 215 -56.38 -121.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FOA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FOA B 302 DBREF 5WIC A 70 232 UNP Q17U16 Q17U16_ECOLX 70 232 DBREF 5WIC B 70 232 UNP Q17U16 Q17U16_ECOLX 70 232 DBREF 5WIC C 70 232 UNP Q17U16 Q17U16_ECOLX 70 232 DBREF 5WIC D 70 232 UNP Q17U16 Q17U16_ECOLX 70 232 SEQRES 1 A 163 ALA HIS LEU LEU THR LEU ASN GLU ALA THR HIS GLU VAL SEQRES 2 A 163 GLN GLN VAL LYS LEU THR ARG ASP GLN THR SER TYR GLY SEQRES 3 A 163 ASP GLU ILE ASP LYS PHE TRP LEU THR GLN TYR VAL ILE SEQRES 4 A 163 HIS ARG GLU SER TYR ASP PHE TYR SER VAL GLN VAL ASP SEQRES 5 A 163 TYR THR ALA VAL GLY LEU MET SER THR PRO ASN VAL ALA SEQRES 6 A 163 GLU SER TYR GLN SER LYS PHE LYS GLY ARG ASN GLY LEU SEQRES 7 A 163 ASP LYS VAL LEU GLY ASP SER GLU THR THR ARG VAL LYS SEQRES 8 A 163 ILE ASN SER VAL ILE LEU ASP LYS PRO HIS GLY VAL ALA SEQRES 9 A 163 THR ILE ARG PHE THR THR VAL ARG ARG VAL ARG SER ASN SEQRES 10 A 163 PRO VAL ASP ASP GLN PRO GLN ARG TRP ILE ALA ILE MET SEQRES 11 A 163 GLY TYR GLU TYR LYS SER LEU ALA MET ASN ALA GLU GLN SEQRES 12 A 163 ARG TYR VAL ASN PRO LEU GLY PHE ARG VAL THR SER TYR SEQRES 13 A 163 ARG VAL ASN PRO GLU VAL ASN SEQRES 1 B 163 ALA HIS LEU LEU THR LEU ASN GLU ALA THR HIS GLU VAL SEQRES 2 B 163 GLN GLN VAL LYS LEU THR ARG ASP GLN THR SER TYR GLY SEQRES 3 B 163 ASP GLU ILE ASP LYS PHE TRP LEU THR GLN TYR VAL ILE SEQRES 4 B 163 HIS ARG GLU SER TYR ASP PHE TYR SER VAL GLN VAL ASP SEQRES 5 B 163 TYR THR ALA VAL GLY LEU MET SER THR PRO ASN VAL ALA SEQRES 6 B 163 GLU SER TYR GLN SER LYS PHE LYS GLY ARG ASN GLY LEU SEQRES 7 B 163 ASP LYS VAL LEU GLY ASP SER GLU THR THR ARG VAL LYS SEQRES 8 B 163 ILE ASN SER VAL ILE LEU ASP LYS PRO HIS GLY VAL ALA SEQRES 9 B 163 THR ILE ARG PHE THR THR VAL ARG ARG VAL ARG SER ASN SEQRES 10 B 163 PRO VAL ASP ASP GLN PRO GLN ARG TRP ILE ALA ILE MET SEQRES 11 B 163 GLY TYR GLU TYR LYS SER LEU ALA MET ASN ALA GLU GLN SEQRES 12 B 163 ARG TYR VAL ASN PRO LEU GLY PHE ARG VAL THR SER TYR SEQRES 13 B 163 ARG VAL ASN PRO GLU VAL ASN SEQRES 1 C 163 ALA HIS LEU LEU THR LEU ASN GLU ALA THR HIS GLU VAL SEQRES 2 C 163 GLN GLN VAL LYS LEU THR ARG ASP GLN THR SER TYR GLY SEQRES 3 C 163 ASP GLU ILE ASP LYS PHE TRP LEU THR GLN TYR VAL ILE SEQRES 4 C 163 HIS ARG GLU SER TYR ASP PHE TYR SER VAL GLN VAL ASP SEQRES 5 C 163 TYR THR ALA VAL GLY LEU MET SER THR PRO ASN VAL ALA SEQRES 6 C 163 GLU SER TYR GLN SER LYS PHE LYS GLY ARG ASN GLY LEU SEQRES 7 C 163 ASP LYS VAL LEU GLY ASP SER GLU THR THR ARG VAL LYS SEQRES 8 C 163 ILE ASN SER VAL ILE LEU ASP LYS PRO HIS GLY VAL ALA SEQRES 9 C 163 THR ILE ARG PHE THR THR VAL ARG ARG VAL ARG SER ASN SEQRES 10 C 163 PRO VAL ASP ASP GLN PRO GLN ARG TRP ILE ALA ILE MET SEQRES 11 C 163 GLY TYR GLU TYR LYS SER LEU ALA MET ASN ALA GLU GLN SEQRES 12 C 163 ARG TYR VAL ASN PRO LEU GLY PHE ARG VAL THR SER TYR SEQRES 13 C 163 ARG VAL ASN PRO GLU VAL ASN SEQRES 1 D 163 ALA HIS LEU LEU THR LEU ASN GLU ALA THR HIS GLU VAL SEQRES 2 D 163 GLN GLN VAL LYS LEU THR ARG ASP GLN THR SER TYR GLY SEQRES 3 D 163 ASP GLU ILE ASP LYS PHE TRP LEU THR GLN TYR VAL ILE SEQRES 4 D 163 HIS ARG GLU SER TYR ASP PHE TYR SER VAL GLN VAL ASP SEQRES 5 D 163 TYR THR ALA VAL GLY LEU MET SER THR PRO ASN VAL ALA SEQRES 6 D 163 GLU SER TYR GLN SER LYS PHE LYS GLY ARG ASN GLY LEU SEQRES 7 D 163 ASP LYS VAL LEU GLY ASP SER GLU THR THR ARG VAL LYS SEQRES 8 D 163 ILE ASN SER VAL ILE LEU ASP LYS PRO HIS GLY VAL ALA SEQRES 9 D 163 THR ILE ARG PHE THR THR VAL ARG ARG VAL ARG SER ASN SEQRES 10 D 163 PRO VAL ASP ASP GLN PRO GLN ARG TRP ILE ALA ILE MET SEQRES 11 D 163 GLY TYR GLU TYR LYS SER LEU ALA MET ASN ALA GLU GLN SEQRES 12 D 163 ARG TYR VAL ASN PRO LEU GLY PHE ARG VAL THR SER TYR SEQRES 13 D 163 ARG VAL ASN PRO GLU VAL ASN HET FOA B 301 11 HET FOA B 302 11 HETNAM FOA 2-FUROIC ACID FORMUL 5 FOA 2(C5 H4 O3) FORMUL 7 HOH *103(H2 O) HELIX 1 AA1 GLY A 95 SER A 112 1 18 HELIX 2 AA2 SER A 117 MET A 128 1 12 HELIX 3 AA3 THR A 130 SER A 139 1 10 HELIX 4 AA4 LYS A 140 LYS A 142 5 3 HELIX 5 AA5 GLY A 146 LEU A 151 1 6 HELIX 6 AA6 LYS A 168 HIS A 170 5 3 HELIX 7 AA7 ASN A 209 TYR A 214 1 6 HELIX 8 AA8 GLY B 95 SER B 112 1 18 HELIX 9 AA9 SER B 117 MET B 128 1 12 HELIX 10 AB1 THR B 130 SER B 139 1 10 HELIX 11 AB2 LYS B 140 LYS B 142 5 3 HELIX 12 AB3 GLY B 146 GLY B 152 1 7 HELIX 13 AB4 LYS B 168 HIS B 170 5 3 HELIX 14 AB5 ASN B 209 ASN B 216 1 8 HELIX 15 AB6 GLY C 95 GLU C 111 1 17 HELIX 16 AB7 SER C 117 MET C 128 1 12 HELIX 17 AB8 THR C 130 SER C 139 1 10 HELIX 18 AB9 LYS C 140 PHE C 141 5 2 HELIX 19 AC1 LYS C 142 ASN C 145 5 4 HELIX 20 AC2 GLY C 146 GLY C 152 1 7 HELIX 21 AC3 LYS C 168 HIS C 170 5 3 HELIX 22 AC4 GLU C 211 VAL C 215 5 5 HELIX 23 AC5 GLY D 95 SER D 112 1 18 HELIX 24 AC6 ASP D 114 TYR D 116 5 3 HELIX 25 AC7 SER D 117 MET D 128 1 12 HELIX 26 AC8 THR D 130 GLN D 138 1 9 HELIX 27 AC9 SER D 139 LYS D 142 5 4 HELIX 28 AD1 GLY D 146 GLY D 152 1 7 SHEET 1 AA1 4 GLU A 155 ASP A 167 0 SHEET 2 AA1 4 VAL A 172 VAL A 183 -1 O ARG A 182 N THR A 156 SHEET 3 AA1 4 GLN A 193 TYR A 203 -1 O ALA A 197 N ILE A 175 SHEET 4 AA1 4 PHE A 220 PRO A 229 -1 O ASN A 228 N ILE A 196 SHEET 1 AA2 4 GLU B 155 ASP B 167 0 SHEET 2 AA2 4 VAL B 172 VAL B 183 -1 O ARG B 182 N THR B 156 SHEET 3 AA2 4 GLN B 193 TYR B 203 -1 O ALA B 197 N ILE B 175 SHEET 4 AA2 4 PHE B 220 PRO B 229 -1 O ASN B 228 N ILE B 196 SHEET 1 AA3 4 GLU C 155 ASP C 167 0 SHEET 2 AA3 4 VAL C 172 VAL C 183 -1 O VAL C 172 N ASP C 167 SHEET 3 AA3 4 GLN C 193 TYR C 203 -1 O ALA C 197 N ILE C 175 SHEET 4 AA3 4 PHE C 220 PRO C 229 -1 O ASN C 228 N ILE C 196 SHEET 1 AA4 4 GLU D 155 ASP D 167 0 SHEET 2 AA4 4 VAL D 172 VAL D 183 -1 O ARG D 182 N THR D 156 SHEET 3 AA4 4 GLN D 193 TYR D 203 -1 O TRP D 195 N PHE D 177 SHEET 4 AA4 4 PHE D 220 PRO D 229 -1 O ASN D 228 N ILE D 196 SITE 1 AC1 4 GLN B 119 TYR B 122 PHE B 141 ASP B 148 SITE 1 AC2 6 HIS B 109 ARG B 110 SER B 112 TYR B 113 SITE 2 AC2 6 TYR B 137 LYS B 140 CRYST1 111.318 123.766 108.076 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008983 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008080 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009253 0.00000