data_5WLM # _entry.id 5WLM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5WLM pdb_00005wlm 10.2210/pdb5wlm/pdb WWPDB D_1000229234 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5WLM _pdbx_database_status.recvd_initial_deposition_date 2017-07-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, S.-Q.' 1 ? 'Liu, L.' 2 ? 'DeGrado, W.F.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 140 _citation.language ? _citation.page_first 1294 _citation.page_last 1304 _citation.title 'De Novo Design of Tetranuclear Transition Metal Clusters Stabilized by Hydrogen-Bonded Networks in Helical Bundles.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.7b08261 _citation.pdbx_database_id_PubMed 29249157 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, S.Q.' 1 ? primary 'Chino, M.' 2 ? primary 'Liu, L.' 3 ? primary 'Tang, Y.' 4 ? primary 'Hu, X.' 5 ? primary 'DeGrado, W.F.' 6 ? primary 'Lombardi, A.' 7 ? # _cell.entry_id 5WLM _cell.length_a 81.156 _cell.length_b 81.156 _cell.length_c 66.331 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WLM _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Helical Bundle 4DH2' 3247.740 4 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 5 ? ? ? ? 3 water nat water 18.015 20 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)IEELLRKIIEDDVRHIAELEDIEKWL(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XIEELLRKIIEDDVRHIAELEDIEKWLX _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 ILE n 1 3 GLU n 1 4 GLU n 1 5 LEU n 1 6 LEU n 1 7 ARG n 1 8 LYS n 1 9 ILE n 1 10 ILE n 1 11 GLU n 1 12 ASP n 1 13 ASP n 1 14 VAL n 1 15 ARG n 1 16 HIS n 1 17 ILE n 1 18 ALA n 1 19 GLU n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 ILE n 1 24 GLU n 1 25 LYS n 1 26 TRP n 1 27 LEU n 1 28 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 28 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5WLM _struct_ref.pdbx_db_accession 5WLM _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5WLM A 1 ? 28 ? 5WLM 0 ? 101 ? 0 101 2 1 5WLM B 1 ? 28 ? 5WLM 0 ? 101 ? 0 101 3 1 5WLM C 1 ? 28 ? 5WLM 0 ? 101 ? 0 101 4 1 5WLM D 1 ? 28 ? 5WLM 0 ? 101 ? 0 101 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5WLM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.74 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 74.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.01 M NiCl2, 1.0 M Li2SO4 and 0.1 M Tris pH 8.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-03-31 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Double-Mirror _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11587 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.11587 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5WLM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 48.24 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17954 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.5 _reflns.pdbx_Rmerge_I_obs 0.179 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.06 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2867 _reflns_shell.percent_possible_all 99.2 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.848 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5WLM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17954 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.24 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 99.68 _refine.ls_R_factor_obs 0.17228 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17159 _refine.ls_R_factor_R_free 0.18747 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 474 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 41.046 _refine.aniso_B[1][1] -10.65 _refine.aniso_B[2][2] -10.65 _refine.aniso_B[3][3] 21.31 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 4EH1 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.019 _refine.pdbx_overall_ESU_R_Free 0.018 _refine.overall_SU_ML 0.054 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.695 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 916 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 20 _refine_hist.number_atoms_total 945 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 48.24 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.019 ? 928 'X-RAY DIFFRACTION' ? r_bond_other_d 0.004 0.020 ? 940 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.117 2.006 ? 1248 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.930 3.000 ? 2156 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.726 5.000 ? 100 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.418 23.929 ? 56 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.996 15.000 ? 200 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.622 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.067 0.200 ? 144 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 976 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 168 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.191 1.590 ? 424 'X-RAY DIFFRACTION' ? r_mcbond_other 0.191 1.590 ? 422 'X-RAY DIFFRACTION' ? r_mcangle_it 0.254 2.383 ? 524 'X-RAY DIFFRACTION' ? r_mcangle_other 0.254 2.383 ? 524 'X-RAY DIFFRACTION' ? r_scbond_it 0.165 1.611 ? 504 'X-RAY DIFFRACTION' ? r_scbond_other 0.165 1.611 ? 505 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 0.251 2.412 ? 725 'X-RAY DIFFRACTION' ? r_long_range_B_refined 1.390 29.433 ? 3561 'X-RAY DIFFRACTION' ? r_long_range_B_other 1.388 29.372 ? 3558 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.946 _refine_ls_shell.d_res_low 1.996 _refine_ls_shell.number_reflns_R_work 1260 _refine_ls_shell.R_factor_R_work 0.238 _refine_ls_shell.percent_reflns_obs 97.50 _refine_ls_shell.R_factor_R_free 0.193 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 67 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5WLM _struct.title 'De Novo Design of Polynuclear Transition Metal Clusters in Helix Bundles-4DH2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5WLM _struct_keywords.text 'Protein Design, Helical Bundle, Metal Binding, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 2 ? LEU A 27 ? ILE A 1 LEU A 26 1 ? 26 HELX_P HELX_P2 AA2 ILE B 2 ? LEU B 27 ? ILE B 1 LEU B 26 1 ? 26 HELX_P HELX_P3 AA3 ILE C 2 ? LEU C 27 ? ILE C 1 LEU C 26 1 ? 26 HELX_P HELX_P4 AA4 ILE D 2 ? LEU D 27 ? ILE D 1 LEU D 26 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A ILE 2 N ? ? A ACE 0 A ILE 1 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A LEU 27 C ? ? ? 1_555 A NH2 28 N ? ? A LEU 26 A NH2 101 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale3 covale both ? B ACE 1 C ? ? ? 1_555 B ILE 2 N ? ? B ACE 0 B ILE 1 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale4 covale both ? B LEU 27 C ? ? ? 1_555 B NH2 28 N ? ? B LEU 26 B NH2 101 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale5 covale both ? C ACE 1 C ? ? ? 1_555 C ILE 2 N ? ? C ACE 0 C ILE 1 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale6 covale both ? C LEU 27 C ? ? ? 1_555 C NH2 28 N ? ? C LEU 26 C NH2 101 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale7 covale both ? D ACE 1 C ? ? ? 1_555 D ILE 2 N ? ? D ACE 0 D ILE 1 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale8 covale both ? D LEU 27 C ? ? ? 1_555 D NH2 28 N ? ? D LEU 26 D NH2 101 1_555 ? ? ? ? ? ? ? 1.344 ? ? metalc1 metalc ? ? A ASP 13 OD1 ? ? ? 1_555 E ZN . ZN ? ? A ASP 12 A ZN 201 1_555 ? ? ? ? ? ? ? 2.650 ? ? metalc2 metalc ? ? A ASP 13 OD2 ? ? ? 1_555 G ZN . ZN ? ? A ASP 12 B ZN 201 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc3 metalc ? ? A HIS 16 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 15 A ZN 201 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc4 metalc ? ? A ASP 22 OD2 ? ? ? 1_555 F ZN . ZN ? ? A ASP 21 A ZN 202 1_555 ? ? ? ? ? ? ? 2.232 ? ? metalc5 metalc ? ? E ZN . ZN ? ? ? 1_555 B ASP 13 OD2 ? ? A ZN 201 B ASP 12 1_555 ? ? ? ? ? ? ? 2.008 ? ? metalc6 metalc ? ? E ZN . ZN ? ? ? 1_555 K HOH . O ? ? A ZN 201 B HOH 304 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc7 metalc ? ? E ZN . ZN ? ? ? 1_555 K HOH . O ? ? A ZN 201 B HOH 304 4_555 ? ? ? ? ? ? ? 2.280 ? ? metalc8 metalc ? ? F ZN . ZN ? ? ? 1_555 J HOH . O ? ? A ZN 202 A HOH 306 1_555 ? ? ? ? ? ? ? 2.212 ? ? metalc9 metalc ? ? F ZN . ZN ? ? ? 5_554 B ASP 22 OD1 ? ? A ZN 202 B ASP 21 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc10 metalc ? ? F ZN . ZN ? ? ? 1_555 K HOH . O ? ? A ZN 202 B HOH 303 5_554 ? ? ? ? ? ? ? 2.463 ? ? metalc11 metalc ? ? J HOH . O ? ? ? 1_555 G ZN . ZN ? ? A HOH 307 B ZN 201 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc12 metalc ? ? J HOH . O ? ? ? 4_555 G ZN . ZN ? ? A HOH 307 B ZN 201 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc13 metalc ? ? B HIS 16 ND1 ? ? ? 1_555 G ZN . ZN ? ? B HIS 15 B ZN 201 1_555 ? ? ? ? ? ? ? 2.177 ? ? metalc14 metalc ? ? C ASP 13 OD2 ? ? ? 1_555 I ZN . ZN ? ? C ASP 12 D ZN 201 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc15 metalc ? ? C HIS 16 ND1 ? ? ? 1_555 H ZN . ZN ? ? C HIS 15 C ZN 201 1_555 ? ? ? ? ? ? ? 2.203 ? ? metalc16 metalc ? ? H ZN . ZN ? ? ? 1_555 D ASP 13 OD2 ? ? C ZN 201 D ASP 12 1_555 ? ? ? ? ? ? ? 1.940 ? ? metalc17 metalc ? ? H ZN . ZN ? ? ? 1_555 M HOH . O ? ? C ZN 201 D HOH 304 1_555 ? ? ? ? ? ? ? 2.263 ? ? metalc18 metalc ? ? H ZN . ZN ? ? ? 1_555 M HOH . O ? ? C ZN 201 D HOH 304 4_555 ? ? ? ? ? ? ? 2.263 ? ? metalc19 metalc ? ? L HOH . O ? ? ? 1_555 I ZN . ZN ? ? C HOH 303 D ZN 201 1_555 ? ? ? ? ? ? ? 2.222 ? ? metalc20 metalc ? ? L HOH . O ? ? ? 4_555 I ZN . ZN ? ? C HOH 303 D ZN 201 1_555 ? ? ? ? ? ? ? 2.222 ? ? metalc21 metalc ? ? D HIS 16 ND1 ? ? ? 1_555 I ZN . ZN ? ? D HIS 15 D ZN 201 1_555 ? ? ? ? ? ? ? 2.071 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NH2 101 ? 4 'binding site for residue NH2 A 101' AC2 Software A ZN 201 ? 8 'binding site for residue ZN A 201' AC3 Software A ZN 202 ? 4 'binding site for residue ZN A 202' AC4 Software B ZN 201 ? 8 'binding site for residue ZN B 201' AC5 Software C ZN 201 ? 8 'binding site for residue ZN C 201' AC6 Software D ZN 201 ? 8 'binding site for residue ZN D 201' AC7 Software B ACE 0 ? 6 'binding site for Di-peptide ACE B 0 and ILE B 1' AC8 Software B NH2 101 ? 6 'binding site for Di-peptide NH2 B 101 and LEU B 26' AC9 Software C ACE 0 ? 7 'binding site for Di-peptide ACE C 0 and ILE C 1' AD1 Software C NH2 101 ? 6 'binding site for Di-peptide NH2 C 101 and LEU C 26' AD2 Software D ACE 0 ? 6 'binding site for Di-peptide ACE D 0 and ILE D 1' AD3 Software D NH2 101 ? 6 'binding site for Di-peptide NH2 D 101 and LEU D 26' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLU A 24 ? GLU A 23 . ? 1_555 ? 2 AC1 4 LYS A 25 ? LYS A 24 . ? 1_555 ? 3 AC1 4 TRP A 26 ? TRP A 25 . ? 1_555 ? 4 AC1 4 LEU A 27 ? LEU A 26 . ? 1_555 ? 5 AC2 8 ASP A 13 ? ASP A 12 . ? 1_555 ? 6 AC2 8 HIS A 16 ? HIS A 15 . ? 1_555 ? 7 AC2 8 ZN G . ? ZN B 201 . ? 1_555 ? 8 AC2 8 ZN G . ? ZN B 201 . ? 4_555 ? 9 AC2 8 ASP B 13 ? ASP B 12 . ? 1_555 ? 10 AC2 8 ASP B 13 ? ASP B 12 . ? 4_555 ? 11 AC2 8 HOH K . ? HOH B 304 . ? 4_555 ? 12 AC2 8 HOH K . ? HOH B 304 . ? 1_555 ? 13 AC3 4 ASP A 22 ? ASP A 21 . ? 1_555 ? 14 AC3 4 HOH J . ? HOH A 306 . ? 1_555 ? 15 AC3 4 ASP B 22 ? ASP B 21 . ? 5_554 ? 16 AC3 4 HOH K . ? HOH B 303 . ? 5_554 ? 17 AC4 8 ASP A 13 ? ASP A 12 . ? 1_555 ? 18 AC4 8 ASP A 13 ? ASP A 12 . ? 4_555 ? 19 AC4 8 ZN E . ? ZN A 201 . ? 1_555 ? 20 AC4 8 ZN E . ? ZN A 201 . ? 4_555 ? 21 AC4 8 HOH J . ? HOH A 307 . ? 4_555 ? 22 AC4 8 HOH J . ? HOH A 307 . ? 1_555 ? 23 AC4 8 ASP B 13 ? ASP B 12 . ? 1_555 ? 24 AC4 8 HIS B 16 ? HIS B 15 . ? 1_555 ? 25 AC5 8 ASP C 13 ? ASP C 12 . ? 1_555 ? 26 AC5 8 HIS C 16 ? HIS C 15 . ? 1_555 ? 27 AC5 8 ZN I . ? ZN D 201 . ? 1_555 ? 28 AC5 8 ZN I . ? ZN D 201 . ? 4_555 ? 29 AC5 8 ASP D 13 ? ASP D 12 . ? 4_555 ? 30 AC5 8 ASP D 13 ? ASP D 12 . ? 1_555 ? 31 AC5 8 HOH M . ? HOH D 304 . ? 4_555 ? 32 AC5 8 HOH M . ? HOH D 304 . ? 1_555 ? 33 AC6 8 ASP C 13 ? ASP C 12 . ? 1_555 ? 34 AC6 8 ASP C 13 ? ASP C 12 . ? 4_555 ? 35 AC6 8 ZN H . ? ZN C 201 . ? 1_555 ? 36 AC6 8 ZN H . ? ZN C 201 . ? 4_555 ? 37 AC6 8 HOH L . ? HOH C 303 . ? 1_555 ? 38 AC6 8 HOH L . ? HOH C 303 . ? 4_555 ? 39 AC6 8 ASP D 13 ? ASP D 12 . ? 1_555 ? 40 AC6 8 HIS D 16 ? HIS D 15 . ? 1_555 ? 41 AC7 6 GLU B 3 ? GLU B 2 . ? 1_555 ? 42 AC7 6 GLU B 4 ? GLU B 3 . ? 1_555 ? 43 AC7 6 LEU B 5 ? LEU B 4 . ? 1_555 ? 44 AC7 6 LEU B 6 ? LEU B 5 . ? 1_555 ? 45 AC7 6 TRP D 26 ? TRP D 25 . ? 1_555 ? 46 AC7 6 LEU D 27 ? LEU D 26 . ? 1_555 ? 47 AC8 6 ILE B 23 ? ILE B 22 . ? 1_555 ? 48 AC8 6 GLU B 24 ? GLU B 23 . ? 1_555 ? 49 AC8 6 LYS B 25 ? LYS B 24 . ? 1_555 ? 50 AC8 6 TRP B 26 ? TRP B 25 . ? 1_555 ? 51 AC8 6 ILE D 2 ? ILE D 1 . ? 4_665 ? 52 AC8 6 GLU D 3 ? GLU D 2 . ? 4_665 ? 53 AC9 7 TRP A 26 ? TRP A 25 . ? 1_555 ? 54 AC9 7 LEU A 27 ? LEU A 26 . ? 1_555 ? 55 AC9 7 GLU C 3 ? GLU C 2 . ? 1_555 ? 56 AC9 7 GLU C 4 ? GLU C 3 . ? 1_555 ? 57 AC9 7 LEU C 5 ? LEU C 4 . ? 1_555 ? 58 AC9 7 LEU C 6 ? LEU C 5 . ? 1_555 ? 59 AC9 7 HOH L . ? HOH C 302 . ? 1_555 ? 60 AD1 6 ILE A 2 ? ILE A 1 . ? 4_445 ? 61 AD1 6 GLU A 3 ? GLU A 2 . ? 4_445 ? 62 AD1 6 ILE C 23 ? ILE C 22 . ? 1_555 ? 63 AD1 6 GLU C 24 ? GLU C 23 . ? 1_555 ? 64 AD1 6 LYS C 25 ? LYS C 24 . ? 1_555 ? 65 AD1 6 TRP C 26 ? TRP C 25 . ? 1_555 ? 66 AD2 6 TRP B 26 ? TRP B 25 . ? 4_445 ? 67 AD2 6 LEU B 27 ? LEU B 26 . ? 4_445 ? 68 AD2 6 GLU D 3 ? GLU D 2 . ? 1_555 ? 69 AD2 6 GLU D 4 ? GLU D 3 . ? 1_555 ? 70 AD2 6 LEU D 5 ? LEU D 4 . ? 1_555 ? 71 AD2 6 LEU D 6 ? LEU D 5 . ? 1_555 ? 72 AD3 6 ILE B 2 ? ILE B 1 . ? 1_555 ? 73 AD3 6 GLU B 3 ? GLU B 2 . ? 1_555 ? 74 AD3 6 ILE D 23 ? ILE D 22 . ? 1_555 ? 75 AD3 6 GLU D 24 ? GLU D 23 . ? 1_555 ? 76 AD3 6 LYS D 25 ? LYS D 24 . ? 1_555 ? 77 AD3 6 TRP D 26 ? TRP D 25 . ? 1_555 ? # _atom_sites.entry_id 5WLM _atom_sites.fract_transf_matrix[1][1] 0.012322 _atom_sites.fract_transf_matrix[1][2] 0.007114 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014228 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015076 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 ILE 2 1 1 ILE ILE A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 ARG 7 6 6 ARG ARG A . n A 1 8 LYS 8 7 7 LYS LYS A . n A 1 9 ILE 9 8 8 ILE ILE A . n A 1 10 ILE 10 9 9 ILE ILE A . n A 1 11 GLU 11 10 10 GLU GLU A . n A 1 12 ASP 12 11 11 ASP ASP A . n A 1 13 ASP 13 12 12 ASP ASP A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 HIS 16 15 15 HIS HIS A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 GLU 19 18 18 GLU GLU A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 GLU 21 20 20 GLU GLU A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 ILE 23 22 22 ILE ILE A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 TRP 26 25 25 TRP TRP A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 NH2 28 101 27 NH2 NH2 A . n B 1 1 ACE 1 0 0 ACE ACE B . n B 1 2 ILE 2 1 1 ILE ILE B . n B 1 3 GLU 3 2 2 GLU GLU B . n B 1 4 GLU 4 3 3 GLU GLU B . n B 1 5 LEU 5 4 4 LEU LEU B . n B 1 6 LEU 6 5 5 LEU LEU B . n B 1 7 ARG 7 6 6 ARG ARG B . n B 1 8 LYS 8 7 7 LYS LYS B . n B 1 9 ILE 9 8 8 ILE ILE B . n B 1 10 ILE 10 9 9 ILE ILE B . n B 1 11 GLU 11 10 10 GLU GLU B . n B 1 12 ASP 12 11 11 ASP ASP B . n B 1 13 ASP 13 12 12 ASP ASP B . n B 1 14 VAL 14 13 13 VAL VAL B . n B 1 15 ARG 15 14 14 ARG ARG B . n B 1 16 HIS 16 15 15 HIS HIS B . n B 1 17 ILE 17 16 16 ILE ILE B . n B 1 18 ALA 18 17 17 ALA ALA B . n B 1 19 GLU 19 18 18 GLU GLU B . n B 1 20 LEU 20 19 19 LEU LEU B . n B 1 21 GLU 21 20 20 GLU GLU B . n B 1 22 ASP 22 21 21 ASP ASP B . n B 1 23 ILE 23 22 22 ILE ILE B . n B 1 24 GLU 24 23 23 GLU GLU B . n B 1 25 LYS 25 24 24 LYS LYS B . n B 1 26 TRP 26 25 25 TRP TRP B . n B 1 27 LEU 27 26 26 LEU LEU B . n B 1 28 NH2 28 101 27 NH2 NH2 B . n C 1 1 ACE 1 0 0 ACE ACE C . n C 1 2 ILE 2 1 1 ILE ILE C . n C 1 3 GLU 3 2 2 GLU GLU C . n C 1 4 GLU 4 3 3 GLU GLU C . n C 1 5 LEU 5 4 4 LEU LEU C . n C 1 6 LEU 6 5 5 LEU LEU C . n C 1 7 ARG 7 6 6 ARG ARG C . n C 1 8 LYS 8 7 7 LYS LYS C . n C 1 9 ILE 9 8 8 ILE ILE C . n C 1 10 ILE 10 9 9 ILE ILE C . n C 1 11 GLU 11 10 10 GLU GLU C . n C 1 12 ASP 12 11 11 ASP ASP C . n C 1 13 ASP 13 12 12 ASP ASP C . n C 1 14 VAL 14 13 13 VAL VAL C . n C 1 15 ARG 15 14 14 ARG ARG C . n C 1 16 HIS 16 15 15 HIS HIS C . n C 1 17 ILE 17 16 16 ILE ILE C . n C 1 18 ALA 18 17 17 ALA ALA C . n C 1 19 GLU 19 18 18 GLU GLU C . n C 1 20 LEU 20 19 19 LEU LEU C . n C 1 21 GLU 21 20 20 GLU GLU C . n C 1 22 ASP 22 21 21 ASP ASP C . n C 1 23 ILE 23 22 22 ILE ILE C . n C 1 24 GLU 24 23 23 GLU GLU C . n C 1 25 LYS 25 24 24 LYS LYS C . n C 1 26 TRP 26 25 25 TRP TRP C . n C 1 27 LEU 27 26 26 LEU LEU C . n C 1 28 NH2 28 101 27 NH2 NH2 C . n D 1 1 ACE 1 0 0 ACE ACE D . n D 1 2 ILE 2 1 1 ILE ILE D . n D 1 3 GLU 3 2 2 GLU GLU D . n D 1 4 GLU 4 3 3 GLU GLU D . n D 1 5 LEU 5 4 4 LEU LEU D . n D 1 6 LEU 6 5 5 LEU LEU D . n D 1 7 ARG 7 6 6 ARG ARG D . n D 1 8 LYS 8 7 7 LYS LYS D . n D 1 9 ILE 9 8 8 ILE ILE D . n D 1 10 ILE 10 9 9 ILE ILE D . n D 1 11 GLU 11 10 10 GLU GLU D . n D 1 12 ASP 12 11 11 ASP ASP D . n D 1 13 ASP 13 12 12 ASP ASP D . n D 1 14 VAL 14 13 13 VAL VAL D . n D 1 15 ARG 15 14 14 ARG ARG D . n D 1 16 HIS 16 15 15 HIS HIS D . n D 1 17 ILE 17 16 16 ILE ILE D . n D 1 18 ALA 18 17 17 ALA ALA D . n D 1 19 GLU 19 18 18 GLU GLU D . n D 1 20 LEU 20 19 19 LEU LEU D . n D 1 21 GLU 21 20 20 GLU GLU D . n D 1 22 ASP 22 21 21 ASP ASP D . n D 1 23 ILE 23 22 22 ILE ILE D . n D 1 24 GLU 24 23 23 GLU GLU D . n D 1 25 LYS 25 24 24 LYS LYS D . n D 1 26 TRP 26 25 25 TRP TRP D . n D 1 27 LEU 27 26 26 LEU LEU D . n D 1 28 NH2 28 101 27 NH2 NH2 D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN 1 201 102 ZN ZN A . F 2 ZN 1 202 103 ZN ZN A . G 2 ZN 1 201 101 ZN ZN B . H 2 ZN 1 201 102 ZN ZN C . I 2 ZN 1 201 101 ZN ZN D . J 3 HOH 1 301 15 HOH HOH A . J 3 HOH 2 302 7 HOH HOH A . J 3 HOH 3 303 12 HOH HOH A . J 3 HOH 4 304 11 HOH HOH A . J 3 HOH 5 305 5 HOH HOH A . J 3 HOH 6 306 13 HOH HOH A . J 3 HOH 7 307 1 HOH HOH A . J 3 HOH 8 308 8 HOH HOH A . J 3 HOH 9 309 20 HOH HOH A . K 3 HOH 1 301 6 HOH HOH B . K 3 HOH 2 302 17 HOH HOH B . K 3 HOH 3 303 18 HOH HOH B . K 3 HOH 4 304 2 HOH HOH B . L 3 HOH 1 301 16 HOH HOH C . L 3 HOH 2 302 10 HOH HOH C . L 3 HOH 3 303 3 HOH HOH C . M 3 HOH 1 301 9 HOH HOH D . M 3 HOH 2 302 19 HOH HOH D . M 3 HOH 3 303 14 HOH HOH D . M 3 HOH 4 304 4 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,E,F,G,J,K 2 1,2 C,D,H,I,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6520 ? 1 MORE -253 ? 1 'SSA (A^2)' 6340 ? 2 'ABSA (A^2)' 6780 ? 2 MORE -252 ? 2 'SSA (A^2)' 6210 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 307 ? J HOH . 2 1 B HOH 304 ? K HOH . 3 1 C HOH 303 ? L HOH . 4 1 D HOH 304 ? M HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 13 ? A ASP 12 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 16 ? A HIS 15 ? 1_555 97.1 ? 2 OD1 ? A ASP 13 ? A ASP 12 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 OD2 ? B ASP 13 ? B ASP 12 ? 1_555 88.0 ? 3 ND1 ? A HIS 16 ? A HIS 15 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 OD2 ? B ASP 13 ? B ASP 12 ? 1_555 107.0 ? 4 OD1 ? A ASP 13 ? A ASP 12 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 O ? K HOH . ? B HOH 304 ? 1_555 160.3 ? 5 ND1 ? A HIS 16 ? A HIS 15 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 O ? K HOH . ? B HOH 304 ? 1_555 97.0 ? 6 OD2 ? B ASP 13 ? B ASP 12 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 O ? K HOH . ? B HOH 304 ? 1_555 101.0 ? 7 OD1 ? A ASP 13 ? A ASP 12 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 O ? K HOH . ? B HOH 304 ? 4_555 160.3 ? 8 ND1 ? A HIS 16 ? A HIS 15 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 O ? K HOH . ? B HOH 304 ? 4_555 97.0 ? 9 OD2 ? B ASP 13 ? B ASP 12 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 O ? K HOH . ? B HOH 304 ? 4_555 101.0 ? 10 O ? K HOH . ? B HOH 304 ? 1_555 ZN ? E ZN . ? A ZN 201 ? 1_555 O ? K HOH . ? B HOH 304 ? 4_555 0.0 ? 11 OD2 ? A ASP 13 ? A ASP 12 ? 1_555 ZN ? G ZN . ? B ZN 201 ? 1_555 O ? J HOH . ? A HOH 307 ? 1_555 93.5 ? 12 OD2 ? A ASP 13 ? A ASP 12 ? 1_555 ZN ? G ZN . ? B ZN 201 ? 1_555 O ? J HOH . ? A HOH 307 ? 4_555 93.5 ? 13 O ? J HOH . ? A HOH 307 ? 1_555 ZN ? G ZN . ? B ZN 201 ? 1_555 O ? J HOH . ? A HOH 307 ? 4_555 0.0 ? 14 OD2 ? A ASP 13 ? A ASP 12 ? 1_555 ZN ? G ZN . ? B ZN 201 ? 1_555 ND1 ? B HIS 16 ? B HIS 15 ? 1_555 106.9 ? 15 O ? J HOH . ? A HOH 307 ? 1_555 ZN ? G ZN . ? B ZN 201 ? 1_555 ND1 ? B HIS 16 ? B HIS 15 ? 1_555 99.8 ? 16 O ? J HOH . ? A HOH 307 ? 4_555 ZN ? G ZN . ? B ZN 201 ? 1_555 ND1 ? B HIS 16 ? B HIS 15 ? 1_555 99.8 ? 17 OD2 ? A ASP 22 ? A ASP 21 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 O ? J HOH . ? A HOH 306 ? 1_555 116.7 ? 18 OD2 ? A ASP 22 ? A ASP 21 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 OD1 ? B ASP 22 ? B ASP 21 ? 1_555 74.6 ? 19 O ? J HOH . ? A HOH 306 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 OD1 ? B ASP 22 ? B ASP 21 ? 1_555 120.9 ? 20 OD2 ? A ASP 22 ? A ASP 21 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 O ? K HOH . ? B HOH 303 ? 5_554 110.3 ? 21 O ? J HOH . ? A HOH 306 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 O ? K HOH . ? B HOH 303 ? 5_554 125.0 ? 22 OD1 ? B ASP 22 ? B ASP 21 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 O ? K HOH . ? B HOH 303 ? 5_554 97.4 ? 23 OD2 ? C ASP 13 ? C ASP 12 ? 1_555 ZN ? I ZN . ? D ZN 201 ? 1_555 O ? L HOH . ? C HOH 303 ? 1_555 97.2 ? 24 OD2 ? C ASP 13 ? C ASP 12 ? 1_555 ZN ? I ZN . ? D ZN 201 ? 1_555 O ? L HOH . ? C HOH 303 ? 4_555 97.2 ? 25 O ? L HOH . ? C HOH 303 ? 1_555 ZN ? I ZN . ? D ZN 201 ? 1_555 O ? L HOH . ? C HOH 303 ? 4_555 0.0 ? 26 OD2 ? C ASP 13 ? C ASP 12 ? 1_555 ZN ? I ZN . ? D ZN 201 ? 1_555 ND1 ? D HIS 16 ? D HIS 15 ? 1_555 101.6 ? 27 O ? L HOH . ? C HOH 303 ? 1_555 ZN ? I ZN . ? D ZN 201 ? 1_555 ND1 ? D HIS 16 ? D HIS 15 ? 1_555 102.8 ? 28 O ? L HOH . ? C HOH 303 ? 4_555 ZN ? I ZN . ? D ZN 201 ? 1_555 ND1 ? D HIS 16 ? D HIS 15 ? 1_555 102.8 ? 29 ND1 ? C HIS 16 ? C HIS 15 ? 1_555 ZN ? H ZN . ? C ZN 201 ? 1_555 OD2 ? D ASP 13 ? D ASP 12 ? 1_555 111.3 ? 30 ND1 ? C HIS 16 ? C HIS 15 ? 1_555 ZN ? H ZN . ? C ZN 201 ? 1_555 O ? M HOH . ? D HOH 304 ? 1_555 97.9 ? 31 OD2 ? D ASP 13 ? D ASP 12 ? 1_555 ZN ? H ZN . ? C ZN 201 ? 1_555 O ? M HOH . ? D HOH 304 ? 1_555 96.9 ? 32 ND1 ? C HIS 16 ? C HIS 15 ? 1_555 ZN ? H ZN . ? C ZN 201 ? 1_555 O ? M HOH . ? D HOH 304 ? 4_555 97.9 ? 33 OD2 ? D ASP 13 ? D ASP 12 ? 1_555 ZN ? H ZN . ? C ZN 201 ? 1_555 O ? M HOH . ? D HOH 304 ? 4_555 96.9 ? 34 O ? M HOH . ? D HOH 304 ? 1_555 ZN ? H ZN . ? C ZN 201 ? 1_555 O ? M HOH . ? D HOH 304 ? 4_555 0.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-01-03 2 'Structure model' 1 1 2018-01-31 3 'Structure model' 1 2 2018-02-07 4 'Structure model' 1 3 2018-05-30 5 'Structure model' 1 4 2020-01-01 6 'Structure model' 2 0 2022-04-13 7 'Structure model' 2 1 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Author supporting evidence' 6 6 'Structure model' Advisory 7 6 'Structure model' 'Atomic model' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' 11 6 'Structure model' 'Structure summary' 12 7 'Structure model' 'Data collection' 13 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' pdbx_struct_assembly_prop 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' pdbx_audit_support 6 6 'Structure model' atom_site 7 6 'Structure model' atom_site_anisotrop 8 6 'Structure model' database_2 9 6 'Structure model' entity 10 6 'Structure model' pdbx_entity_nonpoly 11 6 'Structure model' pdbx_nonpoly_scheme 12 6 'Structure model' pdbx_poly_seq_scheme 13 6 'Structure model' pdbx_struct_assembly_gen 14 6 'Structure model' pdbx_struct_conn_angle 15 6 'Structure model' pdbx_struct_special_symmetry 16 6 'Structure model' pdbx_unobs_or_zero_occ_residues 17 6 'Structure model' struct_asym 18 6 'Structure model' struct_conn 19 6 'Structure model' struct_ref_seq 20 6 'Structure model' struct_site 21 6 'Structure model' struct_site_gen 22 7 'Structure model' chem_comp_atom 23 7 'Structure model' chem_comp_bond 24 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.year' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 4 'Structure model' '_pdbx_struct_assembly_prop.value' 6 4 'Structure model' '_pdbx_struct_oper_list.matrix[1][2]' 7 4 'Structure model' '_pdbx_struct_oper_list.matrix[2][1]' 8 4 'Structure model' '_pdbx_struct_oper_list.name' 9 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 10 4 'Structure model' '_pdbx_struct_oper_list.vector[1]' 11 4 'Structure model' '_pdbx_struct_oper_list.vector[2]' 12 4 'Structure model' '_pdbx_struct_oper_list.vector[3]' 13 5 'Structure model' '_pdbx_audit_support.funding_organization' 14 6 'Structure model' '_atom_site.B_iso_or_equiv' 15 6 'Structure model' '_atom_site.Cartn_x' 16 6 'Structure model' '_atom_site.Cartn_y' 17 6 'Structure model' '_atom_site.Cartn_z' 18 6 'Structure model' '_atom_site.auth_asym_id' 19 6 'Structure model' '_atom_site.auth_atom_id' 20 6 'Structure model' '_atom_site.auth_comp_id' 21 6 'Structure model' '_atom_site.auth_seq_id' 22 6 'Structure model' '_atom_site.group_PDB' 23 6 'Structure model' '_atom_site.label_alt_id' 24 6 'Structure model' '_atom_site.label_asym_id' 25 6 'Structure model' '_atom_site.label_atom_id' 26 6 'Structure model' '_atom_site.label_comp_id' 27 6 'Structure model' '_atom_site.label_entity_id' 28 6 'Structure model' '_atom_site.label_seq_id' 29 6 'Structure model' '_atom_site.occupancy' 30 6 'Structure model' '_atom_site.type_symbol' 31 6 'Structure model' '_atom_site_anisotrop.U[1][1]' 32 6 'Structure model' '_atom_site_anisotrop.U[1][2]' 33 6 'Structure model' '_atom_site_anisotrop.U[1][3]' 34 6 'Structure model' '_atom_site_anisotrop.U[2][2]' 35 6 'Structure model' '_atom_site_anisotrop.U[2][3]' 36 6 'Structure model' '_atom_site_anisotrop.U[3][3]' 37 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 38 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 39 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 40 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 41 6 'Structure model' '_atom_site_anisotrop.pdbx_label_alt_id' 42 6 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 43 6 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 44 6 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 45 6 'Structure model' '_atom_site_anisotrop.pdbx_label_seq_id' 46 6 'Structure model' '_atom_site_anisotrop.type_symbol' 47 6 'Structure model' '_database_2.pdbx_DOI' 48 6 'Structure model' '_database_2.pdbx_database_accession' 49 6 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 50 6 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 51 6 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 52 6 'Structure model' '_pdbx_poly_seq_scheme.pdb_seq_num' 53 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 54 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 55 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 56 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 57 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 58 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 59 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 60 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 61 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 62 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 63 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 64 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 65 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 66 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 67 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 68 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 69 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 70 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 71 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 72 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 73 6 'Structure model' '_pdbx_struct_conn_angle.value' 74 6 'Structure model' '_pdbx_struct_special_symmetry.auth_seq_id' 75 6 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 76 6 'Structure model' '_struct_conn.conn_type_id' 77 6 'Structure model' '_struct_conn.id' 78 6 'Structure model' '_struct_conn.pdbx_dist_value' 79 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 80 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 81 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 82 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 83 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 84 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 85 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 86 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 87 6 'Structure model' '_struct_conn.ptnr1_symmetry' 88 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 89 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 90 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 91 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 92 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 93 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 94 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 95 6 'Structure model' '_struct_conn.ptnr2_symmetry' 96 6 'Structure model' '_struct_ref_seq.db_align_end' 97 6 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' 98 6 'Structure model' '_struct_site.details' 99 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 100 6 'Structure model' '_struct_site.pdbx_auth_seq_id' 101 6 'Structure model' '_struct_site_gen.auth_asym_id' 102 6 'Structure model' '_struct_site_gen.auth_seq_id' 103 6 'Structure model' '_struct_site_gen.label_asym_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 1.5271 -4.6897 -5.4902 0.2122 0.1471 0.0174 0.0262 -0.0004 0.0329 7.1383 12.3023 3.2750 6.5156 1.2098 2.6351 -0.0174 -0.1792 -0.1532 0.1027 -0.0449 0.0840 0.1080 -0.1214 0.0623 'X-RAY DIFFRACTION' 2 ? refined -4.4660 1.6246 -4.2965 0.1674 0.1456 0.0060 0.0048 -0.0162 -0.0226 8.9220 14.2750 2.6911 8.0381 -1.5454 -2.5195 -0.0205 0.0121 0.0937 -0.0762 0.0234 0.1105 0.0237 -0.0686 -0.0029 'X-RAY DIFFRACTION' 3 ? refined -26.7275 -35.2790 -3.7256 0.4311 0.2827 0.3585 -0.1067 -0.0171 0.0327 8.1512 9.7089 1.6356 7.8748 -2.3222 -1.5747 -0.1010 0.2069 0.6505 0.0271 0.3879 0.7494 -0.0886 0.0202 -0.2869 'X-RAY DIFFRACTION' 4 ? refined -24.5630 -33.6178 4.6687 0.3817 0.2688 0.3196 -0.1275 0.0628 -0.0162 2.6868 13.7190 1.1918 4.4197 0.0483 -0.5306 0.0535 0.0375 0.2910 0.3488 0.1012 0.6753 0.0710 -0.0569 -0.1547 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 0 ? ? A 26 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 0 ? ? B 26 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 0 ? ? C 26 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 0 ? ? D 26 ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASP N N N N 48 ASP CA C N S 49 ASP C C N N 50 ASP O O N N 51 ASP CB C N N 52 ASP CG C N N 53 ASP OD1 O N N 54 ASP OD2 O N N 55 ASP OXT O N N 56 ASP H H N N 57 ASP H2 H N N 58 ASP HA H N N 59 ASP HB2 H N N 60 ASP HB3 H N N 61 ASP HD2 H N N 62 ASP HXT H N N 63 GLU N N N N 64 GLU CA C N S 65 GLU C C N N 66 GLU O O N N 67 GLU CB C N N 68 GLU CG C N N 69 GLU CD C N N 70 GLU OE1 O N N 71 GLU OE2 O N N 72 GLU OXT O N N 73 GLU H H N N 74 GLU H2 H N N 75 GLU HA H N N 76 GLU HB2 H N N 77 GLU HB3 H N N 78 GLU HG2 H N N 79 GLU HG3 H N N 80 GLU HE2 H N N 81 GLU HXT H N N 82 HIS N N N N 83 HIS CA C N S 84 HIS C C N N 85 HIS O O N N 86 HIS CB C N N 87 HIS CG C Y N 88 HIS ND1 N Y N 89 HIS CD2 C Y N 90 HIS CE1 C Y N 91 HIS NE2 N Y N 92 HIS OXT O N N 93 HIS H H N N 94 HIS H2 H N N 95 HIS HA H N N 96 HIS HB2 H N N 97 HIS HB3 H N N 98 HIS HD1 H N N 99 HIS HD2 H N N 100 HIS HE1 H N N 101 HIS HE2 H N N 102 HIS HXT H N N 103 HOH O O N N 104 HOH H1 H N N 105 HOH H2 H N N 106 ILE N N N N 107 ILE CA C N S 108 ILE C C N N 109 ILE O O N N 110 ILE CB C N S 111 ILE CG1 C N N 112 ILE CG2 C N N 113 ILE CD1 C N N 114 ILE OXT O N N 115 ILE H H N N 116 ILE H2 H N N 117 ILE HA H N N 118 ILE HB H N N 119 ILE HG12 H N N 120 ILE HG13 H N N 121 ILE HG21 H N N 122 ILE HG22 H N N 123 ILE HG23 H N N 124 ILE HD11 H N N 125 ILE HD12 H N N 126 ILE HD13 H N N 127 ILE HXT H N N 128 LEU N N N N 129 LEU CA C N S 130 LEU C C N N 131 LEU O O N N 132 LEU CB C N N 133 LEU CG C N N 134 LEU CD1 C N N 135 LEU CD2 C N N 136 LEU OXT O N N 137 LEU H H N N 138 LEU H2 H N N 139 LEU HA H N N 140 LEU HB2 H N N 141 LEU HB3 H N N 142 LEU HG H N N 143 LEU HD11 H N N 144 LEU HD12 H N N 145 LEU HD13 H N N 146 LEU HD21 H N N 147 LEU HD22 H N N 148 LEU HD23 H N N 149 LEU HXT H N N 150 LYS N N N N 151 LYS CA C N S 152 LYS C C N N 153 LYS O O N N 154 LYS CB C N N 155 LYS CG C N N 156 LYS CD C N N 157 LYS CE C N N 158 LYS NZ N N N 159 LYS OXT O N N 160 LYS H H N N 161 LYS H2 H N N 162 LYS HA H N N 163 LYS HB2 H N N 164 LYS HB3 H N N 165 LYS HG2 H N N 166 LYS HG3 H N N 167 LYS HD2 H N N 168 LYS HD3 H N N 169 LYS HE2 H N N 170 LYS HE3 H N N 171 LYS HZ1 H N N 172 LYS HZ2 H N N 173 LYS HZ3 H N N 174 LYS HXT H N N 175 NH2 N N N N 176 NH2 HN1 H N N 177 NH2 HN2 H N N 178 TRP N N N N 179 TRP CA C N S 180 TRP C C N N 181 TRP O O N N 182 TRP CB C N N 183 TRP CG C Y N 184 TRP CD1 C Y N 185 TRP CD2 C Y N 186 TRP NE1 N Y N 187 TRP CE2 C Y N 188 TRP CE3 C Y N 189 TRP CZ2 C Y N 190 TRP CZ3 C Y N 191 TRP CH2 C Y N 192 TRP OXT O N N 193 TRP H H N N 194 TRP H2 H N N 195 TRP HA H N N 196 TRP HB2 H N N 197 TRP HB3 H N N 198 TRP HD1 H N N 199 TRP HE1 H N N 200 TRP HE3 H N N 201 TRP HZ2 H N N 202 TRP HZ3 H N N 203 TRP HH2 H N N 204 TRP HXT H N N 205 VAL N N N N 206 VAL CA C N S 207 VAL C C N N 208 VAL O O N N 209 VAL CB C N N 210 VAL CG1 C N N 211 VAL CG2 C N N 212 VAL OXT O N N 213 VAL H H N N 214 VAL H2 H N N 215 VAL HA H N N 216 VAL HB H N N 217 VAL HG11 H N N 218 VAL HG12 H N N 219 VAL HG13 H N N 220 VAL HG21 H N N 221 VAL HG22 H N N 222 VAL HG23 H N N 223 VAL HXT H N N 224 ZN ZN ZN N N 225 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASP N CA sing N N 45 ASP N H sing N N 46 ASP N H2 sing N N 47 ASP CA C sing N N 48 ASP CA CB sing N N 49 ASP CA HA sing N N 50 ASP C O doub N N 51 ASP C OXT sing N N 52 ASP CB CG sing N N 53 ASP CB HB2 sing N N 54 ASP CB HB3 sing N N 55 ASP CG OD1 doub N N 56 ASP CG OD2 sing N N 57 ASP OD2 HD2 sing N N 58 ASP OXT HXT sing N N 59 GLU N CA sing N N 60 GLU N H sing N N 61 GLU N H2 sing N N 62 GLU CA C sing N N 63 GLU CA CB sing N N 64 GLU CA HA sing N N 65 GLU C O doub N N 66 GLU C OXT sing N N 67 GLU CB CG sing N N 68 GLU CB HB2 sing N N 69 GLU CB HB3 sing N N 70 GLU CG CD sing N N 71 GLU CG HG2 sing N N 72 GLU CG HG3 sing N N 73 GLU CD OE1 doub N N 74 GLU CD OE2 sing N N 75 GLU OE2 HE2 sing N N 76 GLU OXT HXT sing N N 77 HIS N CA sing N N 78 HIS N H sing N N 79 HIS N H2 sing N N 80 HIS CA C sing N N 81 HIS CA CB sing N N 82 HIS CA HA sing N N 83 HIS C O doub N N 84 HIS C OXT sing N N 85 HIS CB CG sing N N 86 HIS CB HB2 sing N N 87 HIS CB HB3 sing N N 88 HIS CG ND1 sing Y N 89 HIS CG CD2 doub Y N 90 HIS ND1 CE1 doub Y N 91 HIS ND1 HD1 sing N N 92 HIS CD2 NE2 sing Y N 93 HIS CD2 HD2 sing N N 94 HIS CE1 NE2 sing Y N 95 HIS CE1 HE1 sing N N 96 HIS NE2 HE2 sing N N 97 HIS OXT HXT sing N N 98 HOH O H1 sing N N 99 HOH O H2 sing N N 100 ILE N CA sing N N 101 ILE N H sing N N 102 ILE N H2 sing N N 103 ILE CA C sing N N 104 ILE CA CB sing N N 105 ILE CA HA sing N N 106 ILE C O doub N N 107 ILE C OXT sing N N 108 ILE CB CG1 sing N N 109 ILE CB CG2 sing N N 110 ILE CB HB sing N N 111 ILE CG1 CD1 sing N N 112 ILE CG1 HG12 sing N N 113 ILE CG1 HG13 sing N N 114 ILE CG2 HG21 sing N N 115 ILE CG2 HG22 sing N N 116 ILE CG2 HG23 sing N N 117 ILE CD1 HD11 sing N N 118 ILE CD1 HD12 sing N N 119 ILE CD1 HD13 sing N N 120 ILE OXT HXT sing N N 121 LEU N CA sing N N 122 LEU N H sing N N 123 LEU N H2 sing N N 124 LEU CA C sing N N 125 LEU CA CB sing N N 126 LEU CA HA sing N N 127 LEU C O doub N N 128 LEU C OXT sing N N 129 LEU CB CG sing N N 130 LEU CB HB2 sing N N 131 LEU CB HB3 sing N N 132 LEU CG CD1 sing N N 133 LEU CG CD2 sing N N 134 LEU CG HG sing N N 135 LEU CD1 HD11 sing N N 136 LEU CD1 HD12 sing N N 137 LEU CD1 HD13 sing N N 138 LEU CD2 HD21 sing N N 139 LEU CD2 HD22 sing N N 140 LEU CD2 HD23 sing N N 141 LEU OXT HXT sing N N 142 LYS N CA sing N N 143 LYS N H sing N N 144 LYS N H2 sing N N 145 LYS CA C sing N N 146 LYS CA CB sing N N 147 LYS CA HA sing N N 148 LYS C O doub N N 149 LYS C OXT sing N N 150 LYS CB CG sing N N 151 LYS CB HB2 sing N N 152 LYS CB HB3 sing N N 153 LYS CG CD sing N N 154 LYS CG HG2 sing N N 155 LYS CG HG3 sing N N 156 LYS CD CE sing N N 157 LYS CD HD2 sing N N 158 LYS CD HD3 sing N N 159 LYS CE NZ sing N N 160 LYS CE HE2 sing N N 161 LYS CE HE3 sing N N 162 LYS NZ HZ1 sing N N 163 LYS NZ HZ2 sing N N 164 LYS NZ HZ3 sing N N 165 LYS OXT HXT sing N N 166 NH2 N HN1 sing N N 167 NH2 N HN2 sing N N 168 TRP N CA sing N N 169 TRP N H sing N N 170 TRP N H2 sing N N 171 TRP CA C sing N N 172 TRP CA CB sing N N 173 TRP CA HA sing N N 174 TRP C O doub N N 175 TRP C OXT sing N N 176 TRP CB CG sing N N 177 TRP CB HB2 sing N N 178 TRP CB HB3 sing N N 179 TRP CG CD1 doub Y N 180 TRP CG CD2 sing Y N 181 TRP CD1 NE1 sing Y N 182 TRP CD1 HD1 sing N N 183 TRP CD2 CE2 doub Y N 184 TRP CD2 CE3 sing Y N 185 TRP NE1 CE2 sing Y N 186 TRP NE1 HE1 sing N N 187 TRP CE2 CZ2 sing Y N 188 TRP CE3 CZ3 doub Y N 189 TRP CE3 HE3 sing N N 190 TRP CZ2 CH2 doub Y N 191 TRP CZ2 HZ2 sing N N 192 TRP CZ3 CH2 sing Y N 193 TRP CZ3 HZ3 sing N N 194 TRP CH2 HH2 sing N N 195 TRP OXT HXT sing N N 196 VAL N CA sing N N 197 VAL N H sing N N 198 VAL N H2 sing N N 199 VAL CA C sing N N 200 VAL CA CB sing N N 201 VAL CA HA sing N N 202 VAL C O doub N N 203 VAL C OXT sing N N 204 VAL CB CG1 sing N N 205 VAL CB CG2 sing N N 206 VAL CB HB sing N N 207 VAL CG1 HG11 sing N N 208 VAL CG1 HG12 sing N N 209 VAL CG1 HG13 sing N N 210 VAL CG2 HG21 sing N N 211 VAL CG2 HG22 sing N N 212 VAL CG2 HG23 sing N N 213 VAL OXT HXT sing N N 214 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM54616 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4EH1 _pdbx_initial_refinement_model.details ? # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.fraction _pdbx_reflns_twin.operator _pdbx_reflns_twin.type _pdbx_reflns_twin.mean_F_square_over_mean_F2 _pdbx_reflns_twin.mean_I2_over_mean_I_square 1 1 1 0.674 'H, K, L' ? ? ? 2 1 1 0.326 -h,-k,l ? ? ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'equilibrium centrifugation' _pdbx_struct_assembly_auth_evidence.details 'A-B chains paired with its closest symmetry-related equivalent A*-B* to form a 4-helix bundle; so do C-D in the same way.' #