HEADER TRANSFERASE/RNA 04-JAN-17 5WWR TITLE CRYSTAL STRUCTURE OF HUMAN NSUN6/TRNA/SFG COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE METHYLTRANSFERASE NSUN6; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NOL1/NOP2/SUN AND PUA DOMAIN-CONTAINING PROTEIN 1, COMPND 5 NOL1/NOP2/SUN DOMAIN FAMILY MEMBER 6; COMPND 6 EC: 2.1.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TRNA; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NSUN6, NOPD1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI-PICHIA PASTORIS SHUTTLE VECTOR SOURCE 7 PPPARG4; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 1182032; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606 KEYWDS RNA MODIFICATION, M5C METHYLTRANSFERASE, NSUN, TRANSFERASE-RNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.J.LIU,T.LONG,E.D.WANG REVDAT 4 22-NOV-23 5WWR 1 REMARK REVDAT 3 20-SEP-17 5WWR 1 JRNL REVDAT 2 30-AUG-17 5WWR 1 REMARK REVDAT 1 28-JUN-17 5WWR 0 JRNL AUTH R.J.LIU,T.LONG,J.LI,H.LI,E.D.WANG JRNL TITL STRUCTURAL BASIS FOR SUBSTRATE BINDING AND CATALYTIC JRNL TITL 2 MECHANISM OF A HUMAN RNA:M5C METHYLTRANSFERASE NSUN6 JRNL REF NUCLEIC ACIDS RES. V. 45 6684 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 28531330 JRNL DOI 10.1093/NAR/GKX473 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 78.7 REMARK 3 NUMBER OF REFLECTIONS : 36230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 1793 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8958 - 7.2685 0.99 3386 201 0.1695 0.1908 REMARK 3 2 7.2685 - 5.7737 1.00 3372 173 0.1887 0.2182 REMARK 3 3 5.7737 - 5.0452 1.00 3374 170 0.1744 0.2334 REMARK 3 4 5.0452 - 4.5845 1.00 3370 162 0.1661 0.2050 REMARK 3 5 4.5845 - 4.2562 1.00 3366 184 0.1683 0.2073 REMARK 3 6 4.2562 - 4.0054 1.00 3366 181 0.1912 0.2268 REMARK 3 7 4.0054 - 3.8050 0.94 3156 170 0.2171 0.2472 REMARK 3 8 3.8050 - 3.6394 0.81 2723 133 0.2268 0.2728 REMARK 3 9 3.6394 - 3.4994 0.70 2328 137 0.2403 0.3031 REMARK 3 10 3.4994 - 3.3787 0.61 2039 105 0.2656 0.3057 REMARK 3 11 3.3787 - 3.2731 0.50 1682 91 0.2662 0.3781 REMARK 3 12 3.2731 - 3.1795 0.38 1294 50 0.2992 0.4471 REMARK 3 13 3.1795 - 3.0959 0.29 981 36 0.3154 0.4637 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 10721 REMARK 3 ANGLE : 0.593 15196 REMARK 3 CHIRALITY : 0.024 1844 REMARK 3 PLANARITY : 0.003 1415 REMARK 3 DIHEDRAL : 13.230 4472 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND SEGID A REMARK 3 SELECTION : CHAIN B AND SEGID B REMARK 3 ATOM PAIRS NUMBER : 4407 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN C AND SEGID C REMARK 3 SELECTION : CHAIN D AND SEGID D REMARK 3 ATOM PAIRS NUMBER : 1716 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WWR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1300002518. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97776 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALEPACK, HKL REMARK 200 DATA SCALING SOFTWARE : HKL-3000, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45890 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.096 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5WWQ, 2DU3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SPG, 25% (W/V) PEG 1500, 50 MM REMARK 280 NAF, PH 8.5, VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 103.45400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 85.23900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 103.45400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 85.23900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 304 REMARK 465 ASP A 305 REMARK 465 THR A 306 REMARK 465 GLU A 307 REMARK 465 LYS A 467 REMARK 465 SER A 468 REMARK 465 THR A 469 REMARK 465 LEU A 470 REMARK 465 GLU A 471 REMARK 465 HIS A 472 REMARK 465 HIS A 473 REMARK 465 HIS A 474 REMARK 465 HIS A 475 REMARK 465 HIS A 476 REMARK 465 HIS A 477 REMARK 465 MET B 1 REMARK 465 ASP B 301 REMARK 465 MET B 302 REMARK 465 VAL B 303 REMARK 465 GLU B 304 REMARK 465 ASP B 305 REMARK 465 THR B 306 REMARK 465 GLU B 307 REMARK 465 GLY B 308 REMARK 465 LYS B 467 REMARK 465 SER B 468 REMARK 465 THR B 469 REMARK 465 LEU B 470 REMARK 465 GLU B 471 REMARK 465 HIS B 472 REMARK 465 HIS B 473 REMARK 465 HIS B 474 REMARK 465 HIS B 475 REMARK 465 HIS B 476 REMARK 465 HIS B 477 REMARK 465 G C 1 REMARK 465 G C 34 REMARK 465 C C 35 REMARK 465 G D 1 REMARK 465 G D 34 REMARK 465 C D 35 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 440 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 441 CG CD OE1 OE2 REMARK 470 ARG B 440 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 441 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2' A D 7 OP2 C D 49 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 8 97.29 -69.47 REMARK 500 LEU A 30 -33.76 -147.58 REMARK 500 LEU A 188 58.39 -147.83 REMARK 500 PHE A 208 54.95 -109.72 REMARK 500 ASP A 209 -79.89 -85.35 REMARK 500 PHE A 217 108.75 -160.36 REMARK 500 ASP A 301 -164.34 -78.36 REMARK 500 THR A 338 52.30 -90.95 REMARK 500 ASN A 380 -98.27 -118.51 REMARK 500 ILE A 403 -50.71 -123.11 REMARK 500 GLU A 441 45.79 -98.40 REMARK 500 THR B 59 1.30 -66.76 REMARK 500 PRO B 133 2.79 -69.51 REMARK 500 LYS B 192 -168.21 -112.75 REMARK 500 GLU B 200 77.20 -152.21 REMARK 500 PHE B 208 54.92 -111.05 REMARK 500 ASP B 209 -79.89 -85.35 REMARK 500 ASN B 231 71.83 55.47 REMARK 500 PRO B 245 30.52 -88.48 REMARK 500 THR B 338 49.49 -86.22 REMARK 500 ASN B 380 -101.74 -111.93 REMARK 500 ILE B 403 -52.52 -123.04 REMARK 500 ASP B 435 -150.12 -124.50 REMARK 500 GLU B 441 51.52 -118.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SFG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SFG B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5WWQ RELATED DB: PDB REMARK 900 RELATED ID: 5WWS RELATED DB: PDB REMARK 900 RELATED ID: 5WWT RELATED DB: PDB DBREF 5WWR A 1 469 UNP Q8TEA1 NSUN6_HUMAN 1 469 DBREF 5WWR B 1 469 UNP Q8TEA1 NSUN6_HUMAN 1 469 DBREF 5WWR C 1 76 PDB 5WWR 5WWR 1 76 DBREF 5WWR D 1 76 PDB 5WWR 5WWR 1 76 SEQADV 5WWR LEU A 470 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR GLU A 471 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS A 472 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS A 473 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS A 474 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS A 475 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS A 476 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS A 477 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR LEU B 470 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR GLU B 471 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS B 472 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS B 473 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS B 474 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS B 475 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS B 476 UNP Q8TEA1 EXPRESSION TAG SEQADV 5WWR HIS B 477 UNP Q8TEA1 EXPRESSION TAG SEQRES 1 A 477 MET SER ILE PHE PRO LYS ILE SER LEU ARG PRO GLU VAL SEQRES 2 A 477 GLU ASN TYR LEU LYS GLU GLY PHE MET ASN LYS GLU ILE SEQRES 3 A 477 VAL THR ALA LEU GLY LYS GLN GLU ALA GLU ARG LYS PHE SEQRES 4 A 477 GLU THR LEU LEU LYS HIS LEU SER HIS PRO PRO SER PHE SEQRES 5 A 477 THR THR VAL ARG VAL ASN THR HIS LEU ALA SER VAL GLN SEQRES 6 A 477 HIS VAL LYS ASN LEU LEU LEU ASP GLU LEU GLN LYS GLN SEQRES 7 A 477 PHE ASN GLY LEU SER VAL PRO ILE LEU GLN HIS PRO ASP SEQRES 8 A 477 LEU GLN ASP VAL LEU LEU ILE PRO VAL ILE GLY PRO ARG SEQRES 9 A 477 LYS ASN ILE LYS LYS GLN GLN CYS GLU ALA ILE VAL GLY SEQRES 10 A 477 ALA GLN CYS GLY ASN ALA VAL LEU ARG GLY ALA HIS VAL SEQRES 11 A 477 TYR ALA PRO GLY ILE VAL SER ALA SER GLN PHE MET LYS SEQRES 12 A 477 ALA GLY ASP VAL ILE SER VAL TYR SER ASP ILE LYS GLY SEQRES 13 A 477 LYS CYS LYS LYS GLY ALA LYS GLU PHE ASP GLY THR LYS SEQRES 14 A 477 VAL PHE LEU GLY ASN GLY ILE SER GLU LEU SER ARG LYS SEQRES 15 A 477 GLU ILE PHE SER GLY LEU PRO GLU LEU LYS GLY MET GLY SEQRES 16 A 477 ILE ARG MET THR GLU PRO VAL TYR LEU SER PRO SER PHE SEQRES 17 A 477 ASP SER VAL LEU PRO ARG TYR LEU PHE LEU GLN ASN LEU SEQRES 18 A 477 PRO SER ALA LEU VAL SER HIS VAL LEU ASN PRO GLN PRO SEQRES 19 A 477 GLY GLU LYS ILE LEU ASP LEU CYS ALA ALA PRO GLY GLY SEQRES 20 A 477 LYS THR THR HIS ILE ALA ALA LEU MET HIS ASP GLN GLY SEQRES 21 A 477 GLU VAL ILE ALA LEU ASP LYS ILE PHE ASN LYS VAL GLU SEQRES 22 A 477 LYS ILE LYS GLN ASN ALA LEU LEU LEU GLY LEU ASN SER SEQRES 23 A 477 ILE ARG ALA PHE CYS PHE ASP GLY THR LYS ALA VAL LYS SEQRES 24 A 477 LEU ASP MET VAL GLU ASP THR GLU GLY GLU PRO PRO PHE SEQRES 25 A 477 LEU PRO GLU SER PHE ASP ARG ILE LEU LEU ASP ALA PRO SEQRES 26 A 477 CYS SER GLY MET GLY GLN ARG PRO ASN MET ALA CYS THR SEQRES 27 A 477 TRP SER VAL LYS GLU VAL ALA SER TYR GLN PRO LEU GLN SEQRES 28 A 477 ARG LYS LEU PHE THR ALA ALA VAL GLN LEU LEU LYS PRO SEQRES 29 A 477 GLU GLY VAL LEU VAL TYR SER THR CYS THR ILE THR LEU SEQRES 30 A 477 ALA GLU ASN GLU GLU GLN VAL ALA TRP ALA LEU THR LYS SEQRES 31 A 477 PHE PRO CYS LEU GLN LEU GLN PRO GLN GLU PRO GLN ILE SEQRES 32 A 477 GLY GLY GLU GLY MET ARG GLY ALA GLY LEU SER CYS GLU SEQRES 33 A 477 GLN LEU LYS GLN LEU GLN ARG PHE ASP PRO SER ALA VAL SEQRES 34 A 477 PRO LEU PRO ASP THR ASP MET ASP SER LEU ARG GLU ALA SEQRES 35 A 477 ARG ARG GLU ASP MET LEU ARG LEU ALA ASN LYS ASP SER SEQRES 36 A 477 ILE GLY PHE PHE ILE ALA LYS PHE VAL LYS CYS LYS SER SEQRES 37 A 477 THR LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 477 MET SER ILE PHE PRO LYS ILE SER LEU ARG PRO GLU VAL SEQRES 2 B 477 GLU ASN TYR LEU LYS GLU GLY PHE MET ASN LYS GLU ILE SEQRES 3 B 477 VAL THR ALA LEU GLY LYS GLN GLU ALA GLU ARG LYS PHE SEQRES 4 B 477 GLU THR LEU LEU LYS HIS LEU SER HIS PRO PRO SER PHE SEQRES 5 B 477 THR THR VAL ARG VAL ASN THR HIS LEU ALA SER VAL GLN SEQRES 6 B 477 HIS VAL LYS ASN LEU LEU LEU ASP GLU LEU GLN LYS GLN SEQRES 7 B 477 PHE ASN GLY LEU SER VAL PRO ILE LEU GLN HIS PRO ASP SEQRES 8 B 477 LEU GLN ASP VAL LEU LEU ILE PRO VAL ILE GLY PRO ARG SEQRES 9 B 477 LYS ASN ILE LYS LYS GLN GLN CYS GLU ALA ILE VAL GLY SEQRES 10 B 477 ALA GLN CYS GLY ASN ALA VAL LEU ARG GLY ALA HIS VAL SEQRES 11 B 477 TYR ALA PRO GLY ILE VAL SER ALA SER GLN PHE MET LYS SEQRES 12 B 477 ALA GLY ASP VAL ILE SER VAL TYR SER ASP ILE LYS GLY SEQRES 13 B 477 LYS CYS LYS LYS GLY ALA LYS GLU PHE ASP GLY THR LYS SEQRES 14 B 477 VAL PHE LEU GLY ASN GLY ILE SER GLU LEU SER ARG LYS SEQRES 15 B 477 GLU ILE PHE SER GLY LEU PRO GLU LEU LYS GLY MET GLY SEQRES 16 B 477 ILE ARG MET THR GLU PRO VAL TYR LEU SER PRO SER PHE SEQRES 17 B 477 ASP SER VAL LEU PRO ARG TYR LEU PHE LEU GLN ASN LEU SEQRES 18 B 477 PRO SER ALA LEU VAL SER HIS VAL LEU ASN PRO GLN PRO SEQRES 19 B 477 GLY GLU LYS ILE LEU ASP LEU CYS ALA ALA PRO GLY GLY SEQRES 20 B 477 LYS THR THR HIS ILE ALA ALA LEU MET HIS ASP GLN GLY SEQRES 21 B 477 GLU VAL ILE ALA LEU ASP LYS ILE PHE ASN LYS VAL GLU SEQRES 22 B 477 LYS ILE LYS GLN ASN ALA LEU LEU LEU GLY LEU ASN SER SEQRES 23 B 477 ILE ARG ALA PHE CYS PHE ASP GLY THR LYS ALA VAL LYS SEQRES 24 B 477 LEU ASP MET VAL GLU ASP THR GLU GLY GLU PRO PRO PHE SEQRES 25 B 477 LEU PRO GLU SER PHE ASP ARG ILE LEU LEU ASP ALA PRO SEQRES 26 B 477 CYS SER GLY MET GLY GLN ARG PRO ASN MET ALA CYS THR SEQRES 27 B 477 TRP SER VAL LYS GLU VAL ALA SER TYR GLN PRO LEU GLN SEQRES 28 B 477 ARG LYS LEU PHE THR ALA ALA VAL GLN LEU LEU LYS PRO SEQRES 29 B 477 GLU GLY VAL LEU VAL TYR SER THR CYS THR ILE THR LEU SEQRES 30 B 477 ALA GLU ASN GLU GLU GLN VAL ALA TRP ALA LEU THR LYS SEQRES 31 B 477 PHE PRO CYS LEU GLN LEU GLN PRO GLN GLU PRO GLN ILE SEQRES 32 B 477 GLY GLY GLU GLY MET ARG GLY ALA GLY LEU SER CYS GLU SEQRES 33 B 477 GLN LEU LYS GLN LEU GLN ARG PHE ASP PRO SER ALA VAL SEQRES 34 B 477 PRO LEU PRO ASP THR ASP MET ASP SER LEU ARG GLU ALA SEQRES 35 B 477 ARG ARG GLU ASP MET LEU ARG LEU ALA ASN LYS ASP SER SEQRES 36 B 477 ILE GLY PHE PHE ILE ALA LYS PHE VAL LYS CYS LYS SER SEQRES 37 B 477 THR LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 75 G A G G G U A U A G C U C SEQRES 2 C 75 A G G G G U A G A G C A U SEQRES 3 C 75 U U G A C U G C A G A U C SEQRES 4 C 75 A A G A G G U C C C U G G SEQRES 5 C 75 U U C A A A U C C A G G U SEQRES 6 C 75 G C C C U C U C C A SEQRES 1 D 75 G A G G G U A U A G C U C SEQRES 2 D 75 A G G G G U A G A G C A U SEQRES 3 D 75 U U G A C U G C A G A U C SEQRES 4 D 75 A A G A G G U C C C U G G SEQRES 5 D 75 U U C A A A U C C A G G U SEQRES 6 D 75 G C C C U C U C C A HET SFG A 501 27 HET SFG B 501 27 HETNAM SFG SINEFUNGIN HETSYN SFG ADENOSYL-ORNITHINE FORMUL 5 SFG 2(C15 H23 N7 O5) HELIX 1 AA1 ARG A 10 MET A 22 1 13 HELIX 2 AA2 ASN A 23 GLY A 31 1 9 HELIX 3 AA3 GLY A 31 LEU A 46 1 16 HELIX 4 AA4 SER A 63 PHE A 79 1 17 HELIX 5 AA5 ALA A 118 ARG A 126 1 9 HELIX 6 AA6 SER A 180 SER A 186 1 7 HELIX 7 AA7 ASN A 220 ASN A 231 1 12 HELIX 8 AA8 GLY A 246 MET A 256 1 11 HELIX 9 AA9 ILE A 268 GLY A 283 1 16 HELIX 10 AB1 ASP A 293 ALA A 297 5 5 HELIX 11 AB2 SER A 340 ALA A 345 1 6 HELIX 12 AB3 TYR A 347 LEU A 361 1 15 HELIX 13 AB4 ASN A 380 PHE A 391 1 12 HELIX 14 AB5 SER A 414 LYS A 419 1 6 HELIX 15 AB6 ASP A 435 GLU A 441 1 7 HELIX 16 AB7 ARG A 443 ASP A 454 1 12 HELIX 17 AB8 ARG B 10 MET B 22 1 13 HELIX 18 AB9 ASN B 23 GLY B 31 1 9 HELIX 19 AC1 GLY B 31 LEU B 46 1 16 HELIX 20 AC2 SER B 63 PHE B 79 1 17 HELIX 21 AC3 GLY B 117 ARG B 126 1 10 HELIX 22 AC4 SER B 180 SER B 186 1 7 HELIX 23 AC5 ASN B 220 ASN B 231 1 12 HELIX 24 AC6 GLY B 246 MET B 256 1 11 HELIX 25 AC7 ILE B 268 GLY B 283 1 16 HELIX 26 AC8 ASP B 293 ALA B 297 5 5 HELIX 27 AC9 SER B 340 ALA B 345 1 6 HELIX 28 AD1 TYR B 347 LEU B 361 1 15 HELIX 29 AD2 ASN B 380 PHE B 391 1 12 HELIX 30 AD3 SER B 414 GLN B 420 1 7 HELIX 31 AD4 ASP B 425 VAL B 429 5 5 HELIX 32 AD5 ASP B 435 GLU B 441 1 7 HELIX 33 AD6 ARG B 443 ASP B 454 1 12 SHEET 1 AA1 2 SER A 8 LEU A 9 0 SHEET 2 AA1 2 ALA A 336 CYS A 337 1 O CYS A 337 N SER A 8 SHEET 1 AA2 4 LEU A 87 GLN A 88 0 SHEET 2 AA2 4 VAL A 95 PRO A 99 -1 O LEU A 97 N LEU A 87 SHEET 3 AA2 4 PHE A 52 VAL A 57 -1 N THR A 53 O ILE A 98 SHEET 4 AA2 4 LEU A 216 LEU A 218 -1 O PHE A 217 N ARG A 56 SHEET 1 AA3 6 VAL A 130 TYR A 131 0 SHEET 2 AA3 6 MET A 194 PRO A 201 -1 O ILE A 196 N VAL A 130 SHEET 3 AA3 6 PHE A 171 SER A 177 -1 N ILE A 176 O ARG A 197 SHEET 4 AA3 6 VAL A 147 ASP A 153 -1 N VAL A 150 O LEU A 172 SHEET 5 AA3 6 GLU A 113 GLY A 117 1 N ALA A 114 O TYR A 151 SHEET 6 AA3 6 ILE A 135 ALA A 138 -1 O SER A 137 N ILE A 115 SHEET 1 AA4 7 ILE A 287 CYS A 291 0 SHEET 2 AA4 7 GLU A 261 ASP A 266 1 N VAL A 262 O ARG A 288 SHEET 3 AA4 7 LYS A 237 ASP A 240 1 N ILE A 238 O ILE A 263 SHEET 4 AA4 7 PHE A 317 LEU A 322 1 O ARG A 319 N LYS A 237 SHEET 5 AA4 7 LEU A 362 THR A 372 1 O VAL A 367 N ILE A 320 SHEET 6 AA4 7 PHE A 458 VAL A 464 -1 O PHE A 459 N THR A 372 SHEET 7 AA4 7 GLN A 395 LEU A 396 -1 N GLN A 395 O VAL A 464 SHEET 1 AA5 7 ILE A 287 CYS A 291 0 SHEET 2 AA5 7 GLU A 261 ASP A 266 1 N VAL A 262 O ARG A 288 SHEET 3 AA5 7 LYS A 237 ASP A 240 1 N ILE A 238 O ILE A 263 SHEET 4 AA5 7 PHE A 317 LEU A 322 1 O ARG A 319 N LYS A 237 SHEET 5 AA5 7 LEU A 362 THR A 372 1 O VAL A 367 N ILE A 320 SHEET 6 AA5 7 PHE A 458 VAL A 464 -1 O PHE A 459 N THR A 372 SHEET 7 AA5 7 GLN A 422 PHE A 424 -1 N PHE A 424 O PHE A 458 SHEET 1 AA6 2 SER B 8 LEU B 9 0 SHEET 2 AA6 2 ALA B 336 CYS B 337 1 O CYS B 337 N SER B 8 SHEET 1 AA7 4 LEU B 87 GLN B 88 0 SHEET 2 AA7 4 VAL B 95 PRO B 99 -1 O LEU B 97 N LEU B 87 SHEET 3 AA7 4 PHE B 52 VAL B 57 -1 N THR B 53 O ILE B 98 SHEET 4 AA7 4 LEU B 216 LEU B 218 -1 O PHE B 217 N ARG B 56 SHEET 1 AA8 6 VAL B 130 TYR B 131 0 SHEET 2 AA8 6 MET B 194 PRO B 201 -1 O ILE B 196 N VAL B 130 SHEET 3 AA8 6 LYS B 169 SER B 177 -1 N ASN B 174 O GLU B 200 SHEET 4 AA8 6 VAL B 147 ASP B 153 -1 N VAL B 150 O LEU B 172 SHEET 5 AA8 6 GLU B 113 VAL B 116 1 N ALA B 114 O TYR B 151 SHEET 6 AA8 6 ILE B 135 ALA B 138 -1 O SER B 137 N ILE B 115 SHEET 1 AA9 7 ILE B 287 CYS B 291 0 SHEET 2 AA9 7 GLU B 261 ASP B 266 1 N VAL B 262 O ARG B 288 SHEET 3 AA9 7 LYS B 237 ASP B 240 1 N ILE B 238 O ILE B 263 SHEET 4 AA9 7 PHE B 317 LEU B 322 1 O ARG B 319 N LEU B 239 SHEET 5 AA9 7 LEU B 362 THR B 372 1 O LYS B 363 N PHE B 317 SHEET 6 AA9 7 PHE B 458 LYS B 465 -1 O PHE B 463 N LEU B 368 SHEET 7 AA9 7 LEU B 394 LEU B 396 -1 N GLN B 395 O VAL B 464 SHEET 1 AB1 7 ILE B 287 CYS B 291 0 SHEET 2 AB1 7 GLU B 261 ASP B 266 1 N VAL B 262 O ARG B 288 SHEET 3 AB1 7 LYS B 237 ASP B 240 1 N ILE B 238 O ILE B 263 SHEET 4 AB1 7 PHE B 317 LEU B 322 1 O ARG B 319 N LEU B 239 SHEET 5 AB1 7 LEU B 362 THR B 372 1 O LYS B 363 N PHE B 317 SHEET 6 AB1 7 PHE B 458 LYS B 465 -1 O PHE B 463 N LEU B 368 SHEET 7 AB1 7 GLN B 422 PHE B 424 -1 N GLN B 422 O ILE B 460 CISPEP 1 GLY A 102 PRO A 103 0 0.78 CISPEP 2 ALA A 244 PRO A 245 0 2.07 CISPEP 3 PRO A 310 PRO A 311 0 -0.01 CISPEP 4 ARG A 332 PRO A 333 0 3.16 CISPEP 5 GLU A 400 PRO A 401 0 -1.29 CISPEP 6 GLY B 102 PRO B 103 0 -0.09 CISPEP 7 ALA B 244 PRO B 245 0 1.45 CISPEP 8 PRO B 310 PRO B 311 0 0.36 CISPEP 9 ARG B 332 PRO B 333 0 2.89 CISPEP 10 GLU B 400 PRO B 401 0 0.69 SITE 1 AC1 13 LEU A 241 CYS A 242 ALA A 243 ALA A 244 SITE 2 AC1 13 PRO A 245 GLY A 247 LYS A 248 ASP A 266 SITE 3 AC1 13 LYS A 271 ASP A 293 GLY A 294 ASP A 323 SITE 4 AC1 13 C C 72 SITE 1 AC2 14 CYS B 242 ALA B 243 ALA B 244 PRO B 245 SITE 2 AC2 14 GLY B 247 LYS B 248 ASP B 266 LYS B 267 SITE 3 AC2 14 LYS B 271 PHE B 292 ASP B 293 GLY B 294 SITE 4 AC2 14 ASP B 323 C D 72 CRYST1 206.908 170.478 76.999 90.00 108.55 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004833 0.000000 0.001622 0.00000 SCALE2 0.000000 0.005866 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013699 0.00000