HEADER RIBOSOMAL PROTEIN/NUCLEAR PROTEIN 13-JAN-17 5WYL TITLE CRYSTAL STRUCTURE OF CHAETOMIUM THERMOPHILUM UTP10 N-TERMINAL DOMAIN TITLE 2 IN COMPLEX WITH UTP17 C-TERMINAL HELICES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, UNP RESIDUES 1-471; COMPND 5 SYNONYM: UTP10; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: C-TERMINAL DOMAIN, UNP RESIDUES 907-960; COMPND 11 SYNONYM: UTP17; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM VAR. THERMOPHILUM DSM SOURCE 3 1495; SOURCE 4 ORGANISM_TAXID: 759272; SOURCE 5 STRAIN: DSM 1495; SOURCE 6 GENE: CTHT_0024640; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM VAR. THERMOPHILUM DSM SOURCE 11 1495; SOURCE 12 ORGANISM_TAXID: 759272; SOURCE 13 STRAIN: DSM 1495; SOURCE 14 GENE: CTHT_0058290; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOLAR PROTEIN, PROTEIN COMPLEX, COMPONENTS OF 90S PRERIBOSOME, KEYWDS 2 RIBOSOMAL PROTEIN-NUCLEAR PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.CHEN,X.ZHU,K.YE REVDAT 2 22-NOV-23 5WYL 1 REMARK REVDAT 1 28-JUN-17 5WYL 0 JRNL AUTH Q.SUN,X.ZHU,J.QI,W.AN,P.LAN,D.TAN,R.CHEN,B.WANG,S.ZHENG, JRNL AUTH 2 C.ZHANG,X.CHEN,W.ZHANG,J.CHEN,M.Q.DONG,K.YE JRNL TITL MOLECULAR ARCHITECTURE OF THE 90S SMALL SUBUNIT PRE-RIBOSOME JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28244370 JRNL DOI 10.7554/ELIFE.22086 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11RC1_2513: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 34910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.720 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0142 - 6.3485 0.99 2544 154 0.1904 0.2094 REMARK 3 2 6.3485 - 5.0424 1.00 2422 148 0.1983 0.2352 REMARK 3 3 5.0424 - 4.4060 1.00 2383 145 0.1705 0.2126 REMARK 3 4 4.4060 - 4.0036 1.00 2371 143 0.1812 0.2545 REMARK 3 5 4.0036 - 3.7169 1.00 2347 143 0.2049 0.2889 REMARK 3 6 3.7169 - 3.4979 1.00 2321 141 0.2280 0.2829 REMARK 3 7 3.4979 - 3.3228 1.00 2340 141 0.2423 0.2947 REMARK 3 8 3.3228 - 3.1782 1.00 2323 142 0.2521 0.3142 REMARK 3 9 3.1782 - 3.0559 1.00 2331 141 0.2588 0.3354 REMARK 3 10 3.0559 - 2.9505 1.00 2314 141 0.2692 0.3499 REMARK 3 11 2.9505 - 2.8583 1.00 2315 140 0.2634 0.3396 REMARK 3 12 2.8583 - 2.7766 1.00 2296 139 0.2563 0.3049 REMARK 3 13 2.7766 - 2.7035 1.00 2315 141 0.2615 0.3499 REMARK 3 14 2.7035 - 2.6376 1.00 2290 139 0.2772 0.3926 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7163 REMARK 3 ANGLE : 1.029 9726 REMARK 3 CHIRALITY : 0.052 1156 REMARK 3 PLANARITY : 0.006 1239 REMARK 3 DIHEDRAL : 3.168 4373 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WYL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1300002574. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34951 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 49.154 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 26.99 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.18500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 15.87 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5WY4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES-NA, 20% W/V PEG 8000, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 117.82650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.15450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.15450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.91325 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.15450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.15450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 176.73975 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.15450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.15450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 58.91325 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.15450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.15450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 176.73975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 117.82650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 LEU A 5 REMARK 465 ALA A 6 REMARK 465 GLN A 7 REMARK 465 GLN A 8 REMARK 465 LEU A 9 REMARK 465 ALA A 10 REMARK 465 GLN A 11 REMARK 465 ILE A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 ASN A 15 REMARK 465 SER A 16 REMARK 465 ARG A 17 REMARK 465 SER A 18 REMARK 465 SER A 19 REMARK 465 PHE A 20 REMARK 465 ASN A 21 REMARK 465 VAL A 22 REMARK 465 LYS A 23 REMARK 465 ALA A 24 REMARK 465 LEU A 25 REMARK 465 LYS A 26 REMARK 465 SER A 234 REMARK 465 GLY A 235 REMARK 465 ARG A 236 REMARK 465 ARG A 237 REMARK 465 ALA A 238 REMARK 465 ILE A 239 REMARK 465 GLN A 240 REMARK 465 LEU A 241 REMARK 465 GLU A 242 REMARK 465 ASN A 243 REMARK 465 ASP A 244 REMARK 465 HIS A 245 REMARK 465 LEU A 246 REMARK 465 LEU A 247 REMARK 465 ASP A 408 REMARK 465 ASN A 409 REMARK 465 VAL A 410 REMARK 465 ASP A 411 REMARK 465 ALA A 412 REMARK 465 ASP A 413 REMARK 465 GLY A 414 REMARK 465 ALA A 459 REMARK 465 ILE A 460 REMARK 465 ARG A 461 REMARK 465 PRO A 462 REMARK 465 LYS A 463 REMARK 465 LEU A 464 REMARK 465 ALA A 465 REMARK 465 ILE A 466 REMARK 465 GLU A 467 REMARK 465 GLU A 468 REMARK 465 ALA A 469 REMARK 465 PRO A 470 REMARK 465 GLU A 471 REMARK 465 ASP B 907 REMARK 465 LEU B 908 REMARK 465 ASP B 909 REMARK 465 MET B 910 REMARK 465 GLU B 911 REMARK 465 ASP B 912 REMARK 465 ASN B 913 REMARK 465 GLU B 914 REMARK 465 ASP B 915 REMARK 465 THR B 916 REMARK 465 PRO B 956 REMARK 465 VAL B 957 REMARK 465 ILE B 958 REMARK 465 ASN B 959 REMARK 465 ALA B 960 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 SER C 4 REMARK 465 LEU C 5 REMARK 465 ALA C 6 REMARK 465 GLN C 7 REMARK 465 GLN C 8 REMARK 465 LEU C 9 REMARK 465 ALA C 10 REMARK 465 GLN C 11 REMARK 465 ILE C 12 REMARK 465 ALA C 13 REMARK 465 ALA C 14 REMARK 465 ASN C 15 REMARK 465 SER C 16 REMARK 465 ARG C 17 REMARK 465 SER C 18 REMARK 465 SER C 19 REMARK 465 PHE C 20 REMARK 465 ASN C 21 REMARK 465 VAL C 22 REMARK 465 LYS C 23 REMARK 465 ALA C 24 REMARK 465 LEU C 25 REMARK 465 LYS C 26 REMARK 465 ALA C 27 REMARK 465 SER C 28 REMARK 465 PHE C 447 REMARK 465 ASN C 448 REMARK 465 ILE C 449 REMARK 465 GLU C 450 REMARK 465 GLU C 451 REMARK 465 LEU C 452 REMARK 465 GLU C 453 REMARK 465 LEU C 454 REMARK 465 LYS C 455 REMARK 465 LEU C 456 REMARK 465 GLY C 457 REMARK 465 ALA C 458 REMARK 465 ALA C 459 REMARK 465 ILE C 460 REMARK 465 ARG C 461 REMARK 465 PRO C 462 REMARK 465 LYS C 463 REMARK 465 LEU C 464 REMARK 465 ALA C 465 REMARK 465 ILE C 466 REMARK 465 GLU C 467 REMARK 465 GLU C 468 REMARK 465 ALA C 469 REMARK 465 PRO C 470 REMARK 465 GLU C 471 REMARK 465 ASP D 907 REMARK 465 LEU D 908 REMARK 465 ASP D 909 REMARK 465 MET D 910 REMARK 465 GLU D 911 REMARK 465 ASP D 912 REMARK 465 ASN D 913 REMARK 465 GLU D 914 REMARK 465 PRO D 956 REMARK 465 VAL D 957 REMARK 465 ILE D 958 REMARK 465 ASN D 959 REMARK 465 ALA D 960 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 38 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 96 CG CD CE NZ REMARK 470 ARG A 417 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 418 CG CD CE NZ REMARK 470 ARG A 426 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 431 CG CD OE1 OE2 REMARK 470 ASP A 446 CG OD1 OD2 REMARK 470 ARG B 925 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 89 CG CD OE1 OE2 REMARK 470 ASP C 411 CG OD1 OD2 REMARK 470 ARG C 417 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 418 CG CD CE NZ REMARK 470 GLU C 431 CG CD OE1 OE2 REMARK 470 GLN C 443 CG CD OE1 NE2 REMARK 470 GLU C 444 CG CD OE1 OE2 REMARK 470 GLN D 924 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 517 O HOH A 529 2.03 REMARK 500 O PRO A 336 O HOH A 501 2.04 REMARK 500 OE1 GLU A 163 O HOH A 502 2.10 REMARK 500 NH2 ARG C 83 OD1 ASP C 95 2.11 REMARK 500 NH2 ARG A 83 OD1 ASP A 95 2.12 REMARK 500 O PRO C 190 O HOH C 501 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 63 105.17 -163.40 REMARK 500 THR A 72 -88.69 -119.96 REMARK 500 THR A 87 -176.60 -67.60 REMARK 500 ASN A 131 31.20 -144.19 REMARK 500 MET A 232 33.36 -89.20 REMARK 500 ASP A 337 74.96 47.37 REMARK 500 ALA B 918 175.44 50.54 REMARK 500 THR C 72 -91.41 -120.35 REMARK 500 THR C 87 -165.04 -60.85 REMARK 500 HIS C 143 0.83 -64.91 REMARK 500 LYS C 281 36.49 -97.33 REMARK 500 ASP C 337 70.16 56.72 REMARK 500 ASP C 408 87.45 -57.79 REMARK 500 ASN C 409 -65.05 -91.14 REMARK 500 THR D 954 64.12 -101.04 REMARK 500 REMARK 500 REMARK: NULL DBREF 5WYL A 1 471 UNP G0S5L1 G0S5L1_CHATD 1 471 DBREF 5WYL B 907 960 UNP G0SCS8 G0SCS8_CHATD 907 960 DBREF 5WYL C 1 471 UNP G0S5L1 G0S5L1_CHATD 1 471 DBREF 5WYL D 907 960 UNP G0SCS8 G0SCS8_CHATD 907 960 SEQRES 1 A 471 MET ALA SER SER LEU ALA GLN GLN LEU ALA GLN ILE ALA SEQRES 2 A 471 ALA ASN SER ARG SER SER PHE ASN VAL LYS ALA LEU LYS SEQRES 3 A 471 ALA SER HIS SER LYS SER LEU ILE TRP GLU PRO ARG VAL SEQRES 4 A 471 ALA VAL SER GLN THR PHE ALA GLU ILE TYR SER GLN CYS SEQRES 5 A 471 TYR GLU GLY PHE LYS GLU LEU CYS HIS LEU ASP SER ARG SEQRES 6 A 471 PHE VAL PRO PHE ASP ALA THR LEU PHE SER ALA GLN SER SEQRES 7 A 471 GLN GLU VAL ASP ARG THR GLN MET THR ALA GLU GLU ASN SEQRES 8 A 471 ALA ALA LEU ASP LYS ARG VAL ASP SER PHE LEU HIS LEU SEQRES 9 A 471 VAL GLY SER ARG LEU ARG LEU MET PRO ALA ILE LYS ALA SEQRES 10 A 471 VAL GLU TRP LEU ILE ARG ARG PHE ARG ILE HIS GLU PHE SEQRES 11 A 471 ASN THR GLY THR LEU LEU ALA THR PHE LEU PRO TYR HIS SEQRES 12 A 471 THR ILE PRO ALA PHE VAL THR LEU LEU SER ILE LEU PRO SEQRES 13 A 471 VAL GLN ARG ILE PRO ILE GLU TYR ARG PHE LEU ASP PRO SEQRES 14 A 471 TYR ILE LYS SER LEU THR PRO PRO PRO ARG ALA ALA ILE SEQRES 15 A 471 VAL GLN GLN ALA THR ASN ARG PRO ASP LEU LEU SER ALA SEQRES 16 A 471 ILE SER ARG TYR THR LEU ASP SER CYS ARG ALA LYS GLN SEQRES 17 A 471 GLU TYR PRO GLY LEU ILE SER PHE TRP GLY GLY ILE MET SEQRES 18 A 471 ALA GLU ALA VAL ASN GLY MET ILE ASP LYS MET ARG SER SEQRES 19 A 471 GLY ARG ARG ALA ILE GLN LEU GLU ASN ASP HIS LEU LEU SEQRES 20 A 471 LEU GLN GLN ILE GLY PRO VAL LEU SER GLU ALA MET VAL SEQRES 21 A 471 MET LYS ASP VAL PRO GLY ILE GLN ILE ALA SER TYR MET SEQRES 22 A 471 VAL VAL ALA ILE LEU ALA ALA LYS GLY SER LEU ASN ASP SEQRES 23 A 471 ASN ILE LEU THR ALA PHE MET GLU GLN LEU VAL HIS GLY SEQRES 24 A 471 TRP THR VAL ASP THR LEU ARG PRO GLY LEU VAL CYS LEU SEQRES 25 A 471 THR MET LEU ALA GLN HIS ARG SER ALA LYS GLN LEU SER SEQRES 26 A 471 GLY ARG VAL ALA LYS ALA VAL ILE LYS VAL PRO ASP LEU SEQRES 27 A 471 VAL SER SER LEU ARG ASP ILE SER LYS GLU HIS GLN VAL SEQRES 28 A 471 ASP LYS LEU ALA ASN GLY LEU VAL LEU ALA PHE VAL ASP SEQRES 29 A 471 ARG LEU ALA LYS LYS GLY ASP ILE ARG THR LEU PRO VAL SEQRES 30 A 471 ILE ASN SER LEU LEU LEU SER GLU LEU LEU GLN GLU LYS SEQRES 31 A 471 GLN ALA LYS VAL ALA TYR LYS ALA LEU LEU LEU ALA ALA SEQRES 32 A 471 HIS LYS ILE ASP ASP ASN VAL ASP ALA ASP GLY ASN ILE SEQRES 33 A 471 ARG LYS GLN VAL GLY SER ALA LEU VAL ARG LEU SER GLN SEQRES 34 A 471 ALA GLU GLY ASP VAL GLY ASP ALA ILE ARG THR ALA ILE SEQRES 35 A 471 GLN GLU VAL ASP PHE ASN ILE GLU GLU LEU GLU LEU LYS SEQRES 36 A 471 LEU GLY ALA ALA ILE ARG PRO LYS LEU ALA ILE GLU GLU SEQRES 37 A 471 ALA PRO GLU SEQRES 1 B 54 ASP LEU ASP MET GLU ASP ASN GLU ASP THR HIS ALA VAL SEQRES 2 B 54 VAL VAL ALA PRO GLN ARG LEU ALA GLU ILE PHE ASN ALA SEQRES 3 B 54 ALA PRO ALA PHE ALA MET PRO PRO ILE GLU ASP VAL PHE SEQRES 4 B 54 TYR GLN VAL ALA SER LEU PHE SER THR LYS PRO VAL ILE SEQRES 5 B 54 ASN ALA SEQRES 1 C 471 MET ALA SER SER LEU ALA GLN GLN LEU ALA GLN ILE ALA SEQRES 2 C 471 ALA ASN SER ARG SER SER PHE ASN VAL LYS ALA LEU LYS SEQRES 3 C 471 ALA SER HIS SER LYS SER LEU ILE TRP GLU PRO ARG VAL SEQRES 4 C 471 ALA VAL SER GLN THR PHE ALA GLU ILE TYR SER GLN CYS SEQRES 5 C 471 TYR GLU GLY PHE LYS GLU LEU CYS HIS LEU ASP SER ARG SEQRES 6 C 471 PHE VAL PRO PHE ASP ALA THR LEU PHE SER ALA GLN SER SEQRES 7 C 471 GLN GLU VAL ASP ARG THR GLN MET THR ALA GLU GLU ASN SEQRES 8 C 471 ALA ALA LEU ASP LYS ARG VAL ASP SER PHE LEU HIS LEU SEQRES 9 C 471 VAL GLY SER ARG LEU ARG LEU MET PRO ALA ILE LYS ALA SEQRES 10 C 471 VAL GLU TRP LEU ILE ARG ARG PHE ARG ILE HIS GLU PHE SEQRES 11 C 471 ASN THR GLY THR LEU LEU ALA THR PHE LEU PRO TYR HIS SEQRES 12 C 471 THR ILE PRO ALA PHE VAL THR LEU LEU SER ILE LEU PRO SEQRES 13 C 471 VAL GLN ARG ILE PRO ILE GLU TYR ARG PHE LEU ASP PRO SEQRES 14 C 471 TYR ILE LYS SER LEU THR PRO PRO PRO ARG ALA ALA ILE SEQRES 15 C 471 VAL GLN GLN ALA THR ASN ARG PRO ASP LEU LEU SER ALA SEQRES 16 C 471 ILE SER ARG TYR THR LEU ASP SER CYS ARG ALA LYS GLN SEQRES 17 C 471 GLU TYR PRO GLY LEU ILE SER PHE TRP GLY GLY ILE MET SEQRES 18 C 471 ALA GLU ALA VAL ASN GLY MET ILE ASP LYS MET ARG SER SEQRES 19 C 471 GLY ARG ARG ALA ILE GLN LEU GLU ASN ASP HIS LEU LEU SEQRES 20 C 471 LEU GLN GLN ILE GLY PRO VAL LEU SER GLU ALA MET VAL SEQRES 21 C 471 MET LYS ASP VAL PRO GLY ILE GLN ILE ALA SER TYR MET SEQRES 22 C 471 VAL VAL ALA ILE LEU ALA ALA LYS GLY SER LEU ASN ASP SEQRES 23 C 471 ASN ILE LEU THR ALA PHE MET GLU GLN LEU VAL HIS GLY SEQRES 24 C 471 TRP THR VAL ASP THR LEU ARG PRO GLY LEU VAL CYS LEU SEQRES 25 C 471 THR MET LEU ALA GLN HIS ARG SER ALA LYS GLN LEU SER SEQRES 26 C 471 GLY ARG VAL ALA LYS ALA VAL ILE LYS VAL PRO ASP LEU SEQRES 27 C 471 VAL SER SER LEU ARG ASP ILE SER LYS GLU HIS GLN VAL SEQRES 28 C 471 ASP LYS LEU ALA ASN GLY LEU VAL LEU ALA PHE VAL ASP SEQRES 29 C 471 ARG LEU ALA LYS LYS GLY ASP ILE ARG THR LEU PRO VAL SEQRES 30 C 471 ILE ASN SER LEU LEU LEU SER GLU LEU LEU GLN GLU LYS SEQRES 31 C 471 GLN ALA LYS VAL ALA TYR LYS ALA LEU LEU LEU ALA ALA SEQRES 32 C 471 HIS LYS ILE ASP ASP ASN VAL ASP ALA ASP GLY ASN ILE SEQRES 33 C 471 ARG LYS GLN VAL GLY SER ALA LEU VAL ARG LEU SER GLN SEQRES 34 C 471 ALA GLU GLY ASP VAL GLY ASP ALA ILE ARG THR ALA ILE SEQRES 35 C 471 GLN GLU VAL ASP PHE ASN ILE GLU GLU LEU GLU LEU LYS SEQRES 36 C 471 LEU GLY ALA ALA ILE ARG PRO LYS LEU ALA ILE GLU GLU SEQRES 37 C 471 ALA PRO GLU SEQRES 1 D 54 ASP LEU ASP MET GLU ASP ASN GLU ASP THR HIS ALA VAL SEQRES 2 D 54 VAL VAL ALA PRO GLN ARG LEU ALA GLU ILE PHE ASN ALA SEQRES 3 D 54 ALA PRO ALA PHE ALA MET PRO PRO ILE GLU ASP VAL PHE SEQRES 4 D 54 TYR GLN VAL ALA SER LEU PHE SER THR LYS PRO VAL ILE SEQRES 5 D 54 ASN ALA FORMUL 5 HOH *55(H2 O) HELIX 1 AA1 ALA A 27 LYS A 31 5 5 HELIX 2 AA2 GLU A 36 VAL A 41 1 6 HELIX 3 AA3 THR A 44 ASP A 63 1 20 HELIX 4 AA4 SER A 64 THR A 72 5 9 HELIX 5 AA5 SER A 75 VAL A 81 5 7 HELIX 6 AA6 ASP A 82 MET A 86 5 5 HELIX 7 AA7 THR A 87 GLY A 106 1 20 HELIX 8 AA8 SER A 107 LEU A 109 5 3 HELIX 9 AA9 LEU A 111 ARG A 126 1 16 HELIX 10 AB1 ARG A 126 ASN A 131 1 6 HELIX 11 AB2 ASN A 131 LEU A 140 1 10 HELIX 12 AB3 PRO A 141 HIS A 143 5 3 HELIX 13 AB4 ILE A 145 SER A 153 1 9 HELIX 14 AB5 ILE A 154 LEU A 155 5 2 HELIX 15 AB6 PRO A 156 ILE A 160 5 5 HELIX 16 AB7 PRO A 161 PHE A 166 5 6 HELIX 17 AB8 LEU A 167 LEU A 174 1 8 HELIX 18 AB9 PRO A 178 ARG A 189 1 12 HELIX 19 AC1 ARG A 189 ALA A 206 1 18 HELIX 20 AC2 TYR A 210 MET A 232 1 23 HELIX 21 AC3 ILE A 251 MET A 259 1 9 HELIX 22 AC4 VAL A 264 LYS A 281 1 18 HELIX 23 AC5 ASN A 285 TRP A 300 1 16 HELIX 24 AC6 THR A 301 ASP A 303 5 3 HELIX 25 AC7 THR A 304 HIS A 318 1 15 HELIX 26 AC8 SER A 325 ILE A 333 1 9 HELIX 27 AC9 ASP A 337 SER A 346 1 10 HELIX 28 AD1 VAL A 351 GLY A 370 1 20 HELIX 29 AD2 ARG A 373 LEU A 383 1 11 HELIX 30 AD3 GLN A 388 LYS A 405 1 18 HELIX 31 AD4 ILE A 416 GLN A 429 1 14 HELIX 32 AD5 GLY A 432 VAL A 445 1 14 HELIX 33 AD6 ASN A 448 ALA A 458 1 11 HELIX 34 AD7 ALA B 922 PHE B 930 1 9 HELIX 35 AD8 PRO B 934 MET B 938 5 5 HELIX 36 AD9 PRO B 940 PHE B 952 1 13 HELIX 37 AE1 GLU C 36 VAL C 41 1 6 HELIX 38 AE2 THR C 44 ASP C 63 1 20 HELIX 39 AE3 SER C 64 THR C 72 5 9 HELIX 40 AE4 SER C 75 GLU C 80 5 6 HELIX 41 AE5 ASP C 82 MET C 86 5 5 HELIX 42 AE6 ALA C 88 GLY C 106 1 19 HELIX 43 AE7 SER C 107 LEU C 109 5 3 HELIX 44 AE8 LEU C 111 ARG C 126 1 16 HELIX 45 AE9 ARG C 126 ASN C 131 1 6 HELIX 46 AF1 ASN C 131 LEU C 140 1 10 HELIX 47 AF2 PRO C 141 HIS C 143 5 3 HELIX 48 AF3 ILE C 145 SER C 153 1 9 HELIX 49 AF4 ILE C 154 LEU C 155 5 2 HELIX 50 AF5 PRO C 156 ILE C 160 5 5 HELIX 51 AF6 PRO C 161 PHE C 166 5 6 HELIX 52 AF7 LEU C 167 LEU C 174 1 8 HELIX 53 AF8 PRO C 178 ARG C 189 1 12 HELIX 54 AF9 ARG C 189 ALA C 206 1 18 HELIX 55 AG1 TYR C 210 ARG C 233 1 24 HELIX 56 AG2 ARG C 236 VAL C 260 1 25 HELIX 57 AG3 VAL C 264 LYS C 281 1 18 HELIX 58 AG4 ASN C 285 TRP C 300 1 16 HELIX 59 AG5 THR C 301 ASP C 303 5 3 HELIX 60 AG6 THR C 304 HIS C 318 1 15 HELIX 61 AG7 SER C 325 ILE C 333 1 9 HELIX 62 AG8 ASP C 337 SER C 346 1 10 HELIX 63 AG9 VAL C 351 GLY C 370 1 20 HELIX 64 AH1 ARG C 373 LEU C 383 1 11 HELIX 65 AH2 GLN C 388 ILE C 406 1 19 HELIX 66 AH3 ALA C 412 GLN C 429 1 18 HELIX 67 AH4 GLY C 432 ASP C 446 1 15 HELIX 68 AH5 ALA D 922 ASN D 931 1 10 HELIX 69 AH6 PRO D 934 MET D 938 5 5 HELIX 70 AH7 PRO D 940 PHE D 952 1 13 CRYST1 98.309 98.309 235.653 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010172 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010172 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004244 0.00000