HEADER OXIDOREDUCTASE 30-JAN-17 5X23 TITLE CRYSTAL STRUCTURE OF CYP2C9 GENETIC VARIANT A477T (*30) IN COMPLEX TITLE 2 WITH MULTIPLE LOSARTAN MOLECULES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 2C9; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 24-490; COMPND 5 SYNONYM: (R)-LIMONENE 6-MONOOXYGENASE,(S)-LIMONENE 6-MONOOXYGENASE, COMPND 6 (S)-LIMONENE 7-MONOOXYGENASE,CYPIIC9,CHOLESTEROL 25-HYDROXYLASE, COMPND 7 CYTOCHROME P-450MP,CYTOCHROME P450 MP-4,CYTOCHROME P450 MP-8, COMPND 8 CYTOCHROME P450 PB-1,S-MEPHENYTOIN 4-HYDROXYLASE; COMPND 9 EC: 1.14.13.-,1.14.13.80,1.14.13.48,1.14.13.49,1.14.99.38; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CYP2C9, CYP2C10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2 KEYWDS OXIDOREDUCTASE, CYP2C9 POLYMORPHIC MUTANT, SINGLE NUCLEOTIDE KEYWDS 2 POLYMORPHISM, P450 2C9 GENETIC VARIANT EXPDTA X-RAY DIFFRACTION AUTHOR K.MAEKAWA,M.ADACHI,M.B.SHAH REVDAT 3 22-NOV-23 5X23 1 REMARK REVDAT 2 01-NOV-17 5X23 1 JRNL REVDAT 1 25-OCT-17 5X23 0 JRNL AUTH K.MAEKAWA,M.ADACHI,Y.MATSUZAWA,Q.ZHANG,R.KUROKI,Y.SAITO, JRNL AUTH 2 M.B.SHAH JRNL TITL STRUCTURAL BASIS OF SINGLE-NUCLEOTIDE POLYMORPHISMS IN JRNL TITL 2 CYTOCHROME P450 2C9 JRNL REF BIOCHEMISTRY V. 56 5476 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 28972767 JRNL DOI 10.1021/ACS.BIOCHEM.7B00795 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 55512 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2964 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3984 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.4780 REMARK 3 BIN FREE R VALUE SET COUNT : 237 REMARK 3 BIN FREE R VALUE : 0.4940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3660 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 139 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.68000 REMARK 3 B22 (A**2) : 0.78000 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.141 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.126 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.858 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3898 ; 0.025 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5297 ; 2.501 ; 2.026 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 462 ; 7.844 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 169 ;37.435 ;24.320 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 664 ;17.820 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;22.929 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 591 ; 0.333 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3051 ; 0.015 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2322 ; 1.375 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3784 ; 2.503 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1576 ; 3.541 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1513 ; 5.642 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5X23 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1300002710. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58476 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 45.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1R9O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULFATE, 0.1 M TRIS REMARK 280 PH8.5, 12% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.47600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 71.13650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 80.91550 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.47600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 71.13650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 80.91550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.47600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 71.13650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.91550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.47600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 71.13650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 80.91550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 19 REMARK 465 ALA A 20 REMARK 465 LYS A 21 REMARK 465 LYS A 22 REMARK 465 THR A 23 REMARK 465 SER A 24 REMARK 465 GLY A 25 REMARK 465 ARG A 26 REMARK 465 GLY A 27 REMARK 465 HIS A 491 REMARK 465 HIS A 492 REMARK 465 HIS A 493 REMARK 465 HIS A 494 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 ILE A 47 CG1 CG2 CD1 REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 LYS A 121 CE NZ REMARK 470 LYS A 138 CG CD CE NZ REMARK 470 LYS A 190 CE NZ REMARK 470 ILE A 222 CG1 CG2 CD1 REMARK 470 LYS A 235 CE NZ REMARK 470 GLU A 253 CG CD OE1 OE2 REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 ARG A 333 NE CZ NH1 NH2 REMARK 470 LYS A 375 CG CD CE NZ REMARK 470 LYS A 465 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 785 O HOH A 786 1.80 REMARK 500 O HOH A 775 O HOH A 793 1.97 REMARK 500 NH2 ARG A 150 O HOH A 601 2.02 REMARK 500 OE1 GLU A 274 OG SER A 280 2.02 REMARK 500 O LYS A 59 O HOH A 602 2.04 REMARK 500 OG SER A 220 O ILE A 223 2.04 REMARK 500 ND2 ASN A 418 O HOH A 603 2.05 REMARK 500 O HOH A 670 O HOH A 781 2.06 REMARK 500 OD2 ASP A 224 O HOH A 604 2.14 REMARK 500 NE ARG A 108 O LSN A 502 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 279 C - N - CD ANGL. DEV. = 15.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 38 -49.94 73.04 REMARK 500 ILE A 88 -63.42 -98.20 REMARK 500 HIS A 184 -12.17 76.69 REMARK 500 ILE A 215 -78.73 -97.77 REMARK 500 SER A 254 34.59 -88.19 REMARK 500 ASN A 277 32.13 -154.68 REMARK 500 SER A 365 -126.53 52.50 REMARK 500 ARG A 377 -127.60 62.94 REMARK 500 ASP A 408 103.65 -163.88 REMARK 500 SER A 429 -160.04 78.93 REMARK 500 PRO A 464 -12.15 -42.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 435 SG REMARK 620 2 HEM A 501 NA 96.5 REMARK 620 3 HEM A 501 NB 81.7 87.9 REMARK 620 4 HEM A 501 NC 78.0 173.5 87.8 REMARK 620 5 HEM A 501 ND 90.3 92.8 172.0 90.7 REMARK 620 6 HOH A 662 O 161.5 95.9 85.1 88.6 102.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LSN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LSN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LSN A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5X24 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE N-TERMINAL TRANSMEMBRANE ANCHOR DOMAIN (RESIDUES 1-23 IN P11712) REMARK 999 WAS REPLACED WITH MAKKT. DBREF 5X23 A 24 490 UNP P11712 CP2C9_HUMAN 24 490 SEQADV 5X23 MET A 19 UNP P11712 SEE SEQUENCE DETAILS SEQADV 5X23 ALA A 20 UNP P11712 SEE SEQUENCE DETAILS SEQADV 5X23 LYS A 21 UNP P11712 SEE SEQUENCE DETAILS SEQADV 5X23 LYS A 22 UNP P11712 SEE SEQUENCE DETAILS SEQADV 5X23 THR A 23 UNP P11712 SEE SEQUENCE DETAILS SEQADV 5X23 THR A 477 UNP P11712 ALA 477 ENGINEERED MUTATION SEQADV 5X23 ILE A 490 UNP P11712 VAL 490 ENGINEERED MUTATION SEQADV 5X23 HIS A 491 UNP P11712 EXPRESSION TAG SEQADV 5X23 HIS A 492 UNP P11712 EXPRESSION TAG SEQADV 5X23 HIS A 493 UNP P11712 EXPRESSION TAG SEQADV 5X23 HIS A 494 UNP P11712 EXPRESSION TAG SEQRES 1 A 476 MET ALA LYS LYS THR SER GLY ARG GLY LYS LEU PRO PRO SEQRES 2 A 476 GLY PRO THR PRO LEU PRO VAL ILE GLY ASN ILE LEU GLN SEQRES 3 A 476 ILE GLY ILE LYS ASP ILE SER LYS SER LEU THR ASN LEU SEQRES 4 A 476 SER LYS VAL TYR GLY PRO VAL PHE THR LEU TYR PHE GLY SEQRES 5 A 476 LEU LYS PRO ILE VAL VAL LEU HIS GLY TYR GLU ALA VAL SEQRES 6 A 476 LYS GLU ALA LEU ILE ASP LEU GLY GLU GLU PHE SER GLY SEQRES 7 A 476 ARG GLY ILE PHE PRO LEU ALA GLU ARG ALA ASN ARG GLY SEQRES 8 A 476 PHE GLY ILE VAL PHE SER ASN GLY LYS LYS TRP LYS GLU SEQRES 9 A 476 ILE ARG ARG PHE SER LEU MET THR LEU ARG ASN PHE GLY SEQRES 10 A 476 MET GLY LYS ARG SER ILE GLU ASP ARG VAL GLN GLU GLU SEQRES 11 A 476 ALA ARG CYS LEU VAL GLU GLU LEU ARG LYS THR LYS ALA SEQRES 12 A 476 SER PRO CYS ASP PRO THR PHE ILE LEU GLY CYS ALA PRO SEQRES 13 A 476 CYS ASN VAL ILE CYS SER ILE ILE PHE HIS LYS ARG PHE SEQRES 14 A 476 ASP TYR LYS ASP GLN GLN PHE LEU ASN LEU MET GLU LYS SEQRES 15 A 476 LEU ASN GLU ASN ILE LYS ILE LEU SER SER PRO TRP ILE SEQRES 16 A 476 GLN ILE CYS ASN ASN PHE SER PRO ILE ILE ASP TYR PHE SEQRES 17 A 476 PRO GLY THR HIS ASN LYS LEU LEU LYS ASN VAL ALA PHE SEQRES 18 A 476 MET LYS SER TYR ILE LEU GLU LYS VAL LYS GLU HIS GLN SEQRES 19 A 476 GLU SER MET ASP MET ASN ASN PRO GLN ASP PHE ILE ASP SEQRES 20 A 476 CYS PHE LEU MET LYS MET GLU LYS GLU LYS HIS ASN GLN SEQRES 21 A 476 PRO SER GLU PHE THR ILE GLU SER LEU GLU ASN THR ALA SEQRES 22 A 476 VAL ASP LEU PHE GLY ALA GLY THR GLU THR THR SER THR SEQRES 23 A 476 THR LEU ARG TYR ALA LEU LEU LEU LEU LEU LYS HIS PRO SEQRES 24 A 476 GLU VAL THR ALA LYS VAL GLN GLU GLU ILE GLU ARG VAL SEQRES 25 A 476 ILE GLY ARG ASN ARG SER PRO CYS MET GLN ASP ARG SER SEQRES 26 A 476 HIS MET PRO TYR THR ASP ALA VAL VAL HIS GLU VAL GLN SEQRES 27 A 476 ARG TYR ILE ASP LEU LEU PRO THR SER LEU PRO HIS ALA SEQRES 28 A 476 VAL THR CYS ASP ILE LYS PHE ARG ASN TYR LEU ILE PRO SEQRES 29 A 476 LYS GLY THR THR ILE LEU ILE SER LEU THR SER VAL LEU SEQRES 30 A 476 HIS ASP ASN LYS GLU PHE PRO ASN PRO GLU MET PHE ASP SEQRES 31 A 476 PRO HIS HIS PHE LEU ASP GLU GLY GLY ASN PHE LYS LYS SEQRES 32 A 476 SER LYS TYR PHE MET PRO PHE SER ALA GLY LYS ARG ILE SEQRES 33 A 476 CYS VAL GLY GLU ALA LEU ALA GLY MET GLU LEU PHE LEU SEQRES 34 A 476 PHE LEU THR SER ILE LEU GLN ASN PHE ASN LEU LYS SER SEQRES 35 A 476 LEU VAL ASP PRO LYS ASN LEU ASP THR THR PRO VAL VAL SEQRES 36 A 476 ASN GLY PHE THR SER VAL PRO PRO PHE TYR GLN LEU CYS SEQRES 37 A 476 PHE ILE PRO ILE HIS HIS HIS HIS HET HEM A 501 43 HET LSN A 502 30 HET LSN A 503 30 HET LSN A 504 60 HET PO4 A 505 5 HET K A 506 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM LSN [2-BUTYL-5-CHLORANYL-3-[[4-[2-(2H-1,2,3,4-TETRAZOL-5- HETNAM 2 LSN YL)PHENYL]PHENYL]METHYL]IMIDAZOL-4-YL]METHANOL HETNAM PO4 PHOSPHATE ION HETNAM K POTASSIUM ION HETSYN HEM HEME HETSYN LSN LOSARTAN FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 LSN 3(C22 H23 CL N6 O) FORMUL 6 PO4 O4 P 3- FORMUL 7 K K 1+ FORMUL 8 HOH *197(H2 O) HELIX 1 AA1 ASN A 41 ILE A 45 5 5 HELIX 2 AA2 ASP A 49 GLY A 62 1 14 HELIX 3 AA3 GLY A 79 ILE A 88 1 10 HELIX 4 AA4 PHE A 100 ALA A 106 1 7 HELIX 5 AA5 ASN A 116 LEU A 131 1 16 HELIX 6 AA6 SER A 140 LYS A 158 1 19 HELIX 7 AA7 PRO A 166 HIS A 184 1 19 HELIX 8 AA8 ASP A 191 SER A 209 1 19 HELIX 9 AA9 SER A 210 ILE A 215 1 6 HELIX 10 AB1 CYS A 216 PHE A 219 5 4 HELIX 11 AB2 PHE A 226 SER A 254 1 29 HELIX 12 AB3 ASP A 262 LYS A 275 1 14 HELIX 13 AB4 THR A 283 HIS A 316 1 34 HELIX 14 AB5 HIS A 316 ILE A 331 1 16 HELIX 15 AB6 CYS A 338 HIS A 344 5 7 HELIX 16 AB7 MET A 345 ASP A 360 1 16 HELIX 17 AB8 SER A 390 HIS A 396 1 7 HELIX 18 AB9 ASP A 408 LEU A 413 5 6 HELIX 19 AC1 ALA A 430 ILE A 434 5 5 HELIX 20 AC2 GLY A 437 ASN A 455 1 19 SHEET 1 AA1 5 VAL A 64 PHE A 69 0 SHEET 2 AA1 5 LYS A 72 LEU A 77 -1 O ILE A 74 N LEU A 67 SHEET 3 AA1 5 THR A 386 ILE A 389 1 O LEU A 388 N VAL A 75 SHEET 4 AA1 5 HIS A 368 ALA A 369 -1 N HIS A 368 O ILE A 387 SHEET 5 AA1 5 GLY A 96 ARG A 97 -1 N GLY A 96 O ALA A 369 SHEET 1 AA2 2 ILE A 374 PHE A 376 0 SHEET 2 AA2 2 TYR A 379 ILE A 381 -1 O ILE A 381 N ILE A 374 SHEET 1 AA3 2 PHE A 456 SER A 460 0 SHEET 2 AA3 2 LEU A 485 PRO A 489 -1 O ILE A 488 N ASN A 457 SHEET 1 AA4 2 VAL A 472 ASN A 474 0 SHEET 2 AA4 2 THR A 477 VAL A 479 -1 O VAL A 479 N VAL A 472 LINK SG CYS A 435 FE HEM A 501 1555 1555 2.50 LINK FE HEM A 501 O HOH A 662 1555 1555 1.99 CISPEP 1 GLN A 278 PRO A 279 0 0.08 SITE 1 AC1 21 ARG A 97 ILE A 112 VAL A 113 TRP A 120 SITE 2 AC1 21 ARG A 124 ALA A 297 GLY A 298 THR A 301 SITE 3 AC1 21 THR A 302 THR A 305 SER A 365 HIS A 368 SITE 4 AC1 21 PRO A 427 PHE A 428 SER A 429 ARG A 433 SITE 5 AC1 21 CYS A 435 VAL A 436 GLY A 437 ALA A 441 SITE 6 AC1 21 HOH A 662 SITE 1 AC2 13 ALA A 106 ARG A 108 LEU A 201 ASN A 204 SITE 2 AC2 13 LEU A 208 ASN A 236 VAL A 237 MET A 240 SITE 3 AC2 13 VAL A 292 ASP A 293 GLY A 296 ALA A 297 SITE 4 AC2 13 LSN A 504 SITE 1 AC3 9 SER A 210 TRP A 212 PHE A 226 PRO A 227 SITE 2 AC3 9 GLY A 228 THR A 229 ASN A 231 LYS A 232 SITE 3 AC3 9 HOH A 761 SITE 1 AC4 11 PHE A 69 PHE A 100 GLN A 214 ASN A 218 SITE 2 AC4 11 PRO A 363 THR A 364 SER A 365 PRO A 367 SITE 3 AC4 11 PHE A 476 LSN A 502 HOH A 792 SITE 1 AC5 4 LEU A 413 ASP A 414 GLU A 415 LYS A 420 CRYST1 74.952 142.273 161.831 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013342 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006179 0.00000