data_5X6J # _entry.id 5X6J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5X6J pdb_00005x6j 10.2210/pdb5x6j/pdb WWPDB D_1300002708 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5X6I PDB . unspecified 5X6K PDB . unspecified 5X6L PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5X6J _pdbx_database_status.recvd_initial_deposition_date 2017-02-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Moon, S.' 1 ? 'Bae, E.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Struct Dyn.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2329-7778 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 6 _citation.language ? _citation.page_first 024702 _citation.page_last 024702 _citation.title ;Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1063/1.5089707 _citation.pdbx_database_id_PubMed 31111079 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Moon, S.' 1 ? primary 'Kim, J.' 2 ? primary 'Koo, J.' 3 ? primary 'Bae, E.' 4 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5X6J _cell.details ? _cell.formula_units_Z ? _cell.length_a 65.106 _cell.length_a_esd ? _cell.length_b 65.106 _cell.length_b_esd ? _cell.length_c 94.565 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Adenylate kinase' 23928.262 1 2.7.4.3 ? T26I ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn "BIS(ADENOSINE)-5'-PENTAPHOSPHATE" 916.367 1 ? ? ? ? 4 water nat water 18.015 89 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'AK,ATP-AMP transphosphorylase,ATP:AMP phosphotransferase,Adenylate monophosphate kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNIVLMGLPGAGKGTQADRIVEKYGIPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPDEVTIGIVRERLSKSDCDNG FLLDGFPRTVPQAEALDQLLADMGRKIEHVLNIQVEKEELIARLTGRRICKVCGTSYHLLFNPPQVEGKCDKDGGELYQR ADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIKDVFKDLDVILQGNGQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MNIVLMGLPGAGKGTQADRIVEKYGIPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPDEVTIGIVRERLSKSDCDNG FLLDGFPRTVPQAEALDQLLADMGRKIEHVLNIQVEKEELIARLTGRRICKVCGTSYHLLFNPPQVEGKCDKDGGELYQR ADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIKDVFKDLDVILQGNGQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 ILE n 1 4 VAL n 1 5 LEU n 1 6 MET n 1 7 GLY n 1 8 LEU n 1 9 PRO n 1 10 GLY n 1 11 ALA n 1 12 GLY n 1 13 LYS n 1 14 GLY n 1 15 THR n 1 16 GLN n 1 17 ALA n 1 18 ASP n 1 19 ARG n 1 20 ILE n 1 21 VAL n 1 22 GLU n 1 23 LYS n 1 24 TYR n 1 25 GLY n 1 26 ILE n 1 27 PRO n 1 28 HIS n 1 29 ILE n 1 30 SER n 1 31 THR n 1 32 GLY n 1 33 ASP n 1 34 MET n 1 35 PHE n 1 36 ARG n 1 37 ALA n 1 38 ALA n 1 39 ILE n 1 40 GLN n 1 41 GLU n 1 42 GLY n 1 43 THR n 1 44 GLU n 1 45 LEU n 1 46 GLY n 1 47 VAL n 1 48 LYS n 1 49 ALA n 1 50 LYS n 1 51 SER n 1 52 PHE n 1 53 MET n 1 54 ASP n 1 55 GLN n 1 56 GLY n 1 57 ALA n 1 58 LEU n 1 59 VAL n 1 60 PRO n 1 61 ASP n 1 62 GLU n 1 63 VAL n 1 64 THR n 1 65 ILE n 1 66 GLY n 1 67 ILE n 1 68 VAL n 1 69 ARG n 1 70 GLU n 1 71 ARG n 1 72 LEU n 1 73 SER n 1 74 LYS n 1 75 SER n 1 76 ASP n 1 77 CYS n 1 78 ASP n 1 79 ASN n 1 80 GLY n 1 81 PHE n 1 82 LEU n 1 83 LEU n 1 84 ASP n 1 85 GLY n 1 86 PHE n 1 87 PRO n 1 88 ARG n 1 89 THR n 1 90 VAL n 1 91 PRO n 1 92 GLN n 1 93 ALA n 1 94 GLU n 1 95 ALA n 1 96 LEU n 1 97 ASP n 1 98 GLN n 1 99 LEU n 1 100 LEU n 1 101 ALA n 1 102 ASP n 1 103 MET n 1 104 GLY n 1 105 ARG n 1 106 LYS n 1 107 ILE n 1 108 GLU n 1 109 HIS n 1 110 VAL n 1 111 LEU n 1 112 ASN n 1 113 ILE n 1 114 GLN n 1 115 VAL n 1 116 GLU n 1 117 LYS n 1 118 GLU n 1 119 GLU n 1 120 LEU n 1 121 ILE n 1 122 ALA n 1 123 ARG n 1 124 LEU n 1 125 THR n 1 126 GLY n 1 127 ARG n 1 128 ARG n 1 129 ILE n 1 130 CYS n 1 131 LYS n 1 132 VAL n 1 133 CYS n 1 134 GLY n 1 135 THR n 1 136 SER n 1 137 TYR n 1 138 HIS n 1 139 LEU n 1 140 LEU n 1 141 PHE n 1 142 ASN n 1 143 PRO n 1 144 PRO n 1 145 GLN n 1 146 VAL n 1 147 GLU n 1 148 GLY n 1 149 LYS n 1 150 CYS n 1 151 ASP n 1 152 LYS n 1 153 ASP n 1 154 GLY n 1 155 GLY n 1 156 GLU n 1 157 LEU n 1 158 TYR n 1 159 GLN n 1 160 ARG n 1 161 ALA n 1 162 ASP n 1 163 ASP n 1 164 ASN n 1 165 PRO n 1 166 ASP n 1 167 THR n 1 168 VAL n 1 169 THR n 1 170 ASN n 1 171 ARG n 1 172 LEU n 1 173 GLU n 1 174 VAL n 1 175 ASN n 1 176 MET n 1 177 ASN n 1 178 GLN n 1 179 THR n 1 180 ALA n 1 181 PRO n 1 182 LEU n 1 183 LEU n 1 184 ALA n 1 185 PHE n 1 186 TYR n 1 187 ASP n 1 188 SER n 1 189 LYS n 1 190 GLU n 1 191 VAL n 1 192 LEU n 1 193 VAL n 1 194 ASN n 1 195 ILE n 1 196 ASN n 1 197 GLY n 1 198 GLN n 1 199 LYS n 1 200 ASP n 1 201 ILE n 1 202 LYS n 1 203 ASP n 1 204 VAL n 1 205 PHE n 1 206 LYS n 1 207 ASP n 1 208 LEU n 1 209 ASP n 1 210 VAL n 1 211 ILE n 1 212 LEU n 1 213 GLN n 1 214 GLY n 1 215 ASN n 1 216 GLY n 1 217 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 217 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene adk _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sporosarcina globispora' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1459 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KAD_SPOGL _struct_ref.pdbx_db_accession P84139 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNIVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPDEVTIGIVRERLSKSDCDNG FLLDGFPRTVPQAEALDQLLADMGRKIEHVLNIQVEKEELIARLTGRRICKVCGTSYHLLFNPPQVEGKCDKDGGELYQR ADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIKDVFKDLDVILQGNGQ ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5X6J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 217 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P84139 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 217 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 217 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5X6J _struct_ref_seq_dif.mon_id ILE _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 26 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P84139 _struct_ref_seq_dif.db_mon_id THR _struct_ref_seq_dif.pdbx_seq_db_seq_num 26 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 26 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AP5 non-polymer . "BIS(ADENOSINE)-5'-PENTAPHOSPHATE" ? 'C20 H29 N10 O22 P5' 916.367 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5X6J _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.5M ammonium sulfate, 1% polyethylene glycol 1000, 0.1% Sodium azide, 50mM HEPES pH 7.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2011-07-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5X6J _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13990 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 21.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 53.98 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.50800 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 21.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.16 _refine.aniso_B[1][2] -0.08 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.16 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.53 _refine.B_iso_max ? _refine.B_iso_mean 49.319 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.923 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5X6J _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.10 _refine.ls_d_res_low 50.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13143 _refine.ls_number_reflns_R_free 683 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.79 _refine.ls_percent_reflns_R_free 4.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19679 _refine.ls_R_factor_R_free 0.27611 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19310 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1S3G _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.227 _refine.pdbx_overall_ESU_R_Free 0.219 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 10.546 _refine.overall_SU_ML 0.164 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1648 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 1795 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 0.019 1732 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 1662 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.043 2.024 2350 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.881 3.000 3832 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.077 5.000 212 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.414 25.443 79 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.244 15.000 309 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.465 15.000 11 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.098 0.200 265 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 1927 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 364 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 3.244 3.796 851 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.235 3.793 850 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.299 5.671 1062 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.299 5.675 1063 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.840 4.143 881 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.838 4.143 882 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.698 6.052 1289 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 7.312 30.562 2023 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 7.313 30.390 1995 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.101 _refine_ls_shell.d_res_low 2.156 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.number_reflns_R_work 951 _refine_ls_shell.percent_reflns_obs 99.90 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.280 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.261 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5X6J _struct.title 'Crystal structure of B. globisporus adenylate kinase variant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5X6J _struct_keywords.text 'ATP binding, phosphotransferase activity, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 12 ? GLY A 25 ? GLY A 12 GLY A 25 1 ? 14 HELX_P HELX_P2 AA2 THR A 31 ? GLY A 42 ? THR A 31 GLY A 42 1 ? 12 HELX_P HELX_P3 AA3 THR A 43 ? GLY A 56 ? THR A 43 GLY A 56 1 ? 14 HELX_P HELX_P4 AA4 PRO A 60 ? LYS A 74 ? PRO A 60 LYS A 74 1 ? 15 HELX_P HELX_P5 AA5 SER A 75 ? ASP A 78 ? SER A 75 ASP A 78 5 ? 4 HELX_P HELX_P6 AA6 THR A 89 ? ASP A 102 ? THR A 89 ASP A 102 1 ? 14 HELX_P HELX_P7 AA7 GLU A 116 ? LEU A 124 ? GLU A 116 LEU A 124 1 ? 9 HELX_P HELX_P8 AA8 ASN A 164 ? GLN A 178 ? ASN A 164 GLN A 178 1 ? 15 HELX_P HELX_P9 AA9 GLN A 178 ? SER A 188 ? GLN A 178 SER A 188 1 ? 11 HELX_P HELX_P10 AB1 ASP A 200 ? GLN A 213 ? ASP A 200 GLN A 213 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 130 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 130 A ZN 301 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc2 metalc ? ? A CYS 133 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 133 A ZN 301 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc3 metalc ? ? A CYS 150 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 150 A ZN 301 1_555 ? ? ? ? ? ? ? 2.393 ? ? metalc4 metalc ? ? A ASP 153 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 153 A ZN 301 1_555 ? ? ? ? ? ? ? 2.329 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 86 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 86 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 87 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 87 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.61 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 28 ? SER A 30 ? HIS A 28 SER A 30 AA1 2 PHE A 81 ? ASP A 84 ? PHE A 81 ASP A 84 AA1 3 ASN A 2 ? GLY A 7 ? ASN A 2 GLY A 7 AA1 4 HIS A 109 ? GLN A 114 ? HIS A 109 GLN A 114 AA1 5 LEU A 192 ? ASN A 196 ? LEU A 192 ASN A 196 AA2 1 SER A 136 ? HIS A 138 ? SER A 136 HIS A 138 AA2 2 ARG A 127 ? CYS A 130 ? ARG A 127 CYS A 130 AA2 3 LEU A 157 ? TYR A 158 ? LEU A 157 TYR A 158 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 29 ? N ILE A 29 O LEU A 82 ? O LEU A 82 AA1 2 3 O PHE A 81 ? O PHE A 81 N ILE A 3 ? N ILE A 3 AA1 3 4 N VAL A 4 ? N VAL A 4 O LEU A 111 ? O LEU A 111 AA1 4 5 N GLN A 114 ? N GLN A 114 O ILE A 195 ? O ILE A 195 AA2 1 2 O TYR A 137 ? O TYR A 137 N ARG A 128 ? N ARG A 128 AA2 2 3 N ILE A 129 ? N ILE A 129 O TYR A 158 ? O TYR A 158 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 301 ? 4 'binding site for residue ZN A 301' AC2 Software A AP5 302 ? 39 'binding site for residue AP5 A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 130 ? CYS A 130 . ? 1_555 ? 2 AC1 4 CYS A 133 ? CYS A 133 . ? 1_555 ? 3 AC1 4 CYS A 150 ? CYS A 150 . ? 1_555 ? 4 AC1 4 ASP A 153 ? ASP A 153 . ? 1_555 ? 5 AC2 39 PRO A 9 ? PRO A 9 . ? 1_555 ? 6 AC2 39 GLY A 10 ? GLY A 10 . ? 1_555 ? 7 AC2 39 ALA A 11 ? ALA A 11 . ? 1_555 ? 8 AC2 39 GLY A 12 ? GLY A 12 . ? 1_555 ? 9 AC2 39 LYS A 13 ? LYS A 13 . ? 1_555 ? 10 AC2 39 GLY A 14 ? GLY A 14 . ? 1_555 ? 11 AC2 39 THR A 15 ? THR A 15 . ? 1_555 ? 12 AC2 39 THR A 31 ? THR A 31 . ? 1_555 ? 13 AC2 39 GLY A 32 ? GLY A 32 . ? 1_555 ? 14 AC2 39 PHE A 35 ? PHE A 35 . ? 1_555 ? 15 AC2 39 ARG A 36 ? ARG A 36 . ? 1_555 ? 16 AC2 39 MET A 53 ? MET A 53 . ? 1_555 ? 17 AC2 39 ALA A 57 ? ALA A 57 . ? 1_555 ? 18 AC2 39 VAL A 59 ? VAL A 59 . ? 1_555 ? 19 AC2 39 THR A 64 ? THR A 64 . ? 1_555 ? 20 AC2 39 GLY A 85 ? GLY A 85 . ? 1_555 ? 21 AC2 39 PHE A 86 ? PHE A 86 . ? 1_555 ? 22 AC2 39 ARG A 88 ? ARG A 88 . ? 1_555 ? 23 AC2 39 GLN A 92 ? GLN A 92 . ? 1_555 ? 24 AC2 39 ARG A 123 ? ARG A 123 . ? 1_555 ? 25 AC2 39 ARG A 127 ? ARG A 127 . ? 1_555 ? 26 AC2 39 SER A 136 ? SER A 136 . ? 1_555 ? 27 AC2 39 TYR A 137 ? TYR A 137 . ? 1_555 ? 28 AC2 39 HIS A 138 ? HIS A 138 . ? 1_555 ? 29 AC2 39 PHE A 141 ? PHE A 141 . ? 1_555 ? 30 AC2 39 ARG A 160 ? ARG A 160 . ? 1_555 ? 31 AC2 39 ARG A 171 ? ARG A 171 . ? 1_555 ? 32 AC2 39 GLY A 197 ? GLY A 197 . ? 1_555 ? 33 AC2 39 LYS A 199 ? LYS A 199 . ? 1_555 ? 34 AC2 39 ILE A 201 ? ILE A 201 . ? 1_555 ? 35 AC2 39 HOH D . ? HOH A 406 . ? 1_555 ? 36 AC2 39 HOH D . ? HOH A 409 . ? 1_555 ? 37 AC2 39 HOH D . ? HOH A 411 . ? 1_555 ? 38 AC2 39 HOH D . ? HOH A 413 . ? 1_555 ? 39 AC2 39 HOH D . ? HOH A 415 . ? 1_555 ? 40 AC2 39 HOH D . ? HOH A 419 . ? 1_555 ? 41 AC2 39 HOH D . ? HOH A 421 . ? 1_555 ? 42 AC2 39 HOH D . ? HOH A 425 . ? 1_555 ? 43 AC2 39 HOH D . ? HOH A 446 . ? 1_555 ? # _atom_sites.entry_id 5X6J _atom_sites.fract_transf_matrix[1][1] 0.015360 _atom_sites.fract_transf_matrix[1][2] 0.008868 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017736 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010575 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 MET 6 6 6 MET MET A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 HIS 28 28 28 HIS HIS A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 MET 53 53 53 MET MET A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 MET 103 103 103 MET MET A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 HIS 109 109 109 HIS HIS A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 CYS 130 130 130 CYS CYS A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 CYS 133 133 133 CYS CYS A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 HIS 138 138 138 HIS HIS A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 CYS 150 150 150 CYS CYS A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 ARG 171 171 171 ARG ARG A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 MET 176 176 176 MET MET A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 TYR 186 186 186 TYR TYR A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 LYS 189 189 189 LYS LYS A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 ASN 196 196 196 ASN ASN A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 LYS 199 199 199 LYS LYS A . n A 1 200 ASP 200 200 200 ASP ASP A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 ASP 203 203 203 ASP ASP A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 PHE 205 205 205 PHE PHE A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 ASP 207 207 207 ASP ASP A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 GLY 214 214 ? ? ? A . n A 1 215 ASN 215 215 ? ? ? A . n A 1 216 GLY 216 216 ? ? ? A . n A 1 217 GLN 217 217 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 301 219 ZN ZN A . C 3 AP5 1 302 218 AP5 AP5 A . D 4 HOH 1 401 169 HOH HOH A . D 4 HOH 2 402 28 HOH HOH A . D 4 HOH 3 403 178 HOH HOH A . D 4 HOH 4 404 17 HOH HOH A . D 4 HOH 5 405 83 HOH HOH A . D 4 HOH 6 406 30 HOH HOH A . D 4 HOH 7 407 66 HOH HOH A . D 4 HOH 8 408 49 HOH HOH A . D 4 HOH 9 409 65 HOH HOH A . D 4 HOH 10 410 50 HOH HOH A . D 4 HOH 11 411 42 HOH HOH A . D 4 HOH 12 412 160 HOH HOH A . D 4 HOH 13 413 7 HOH HOH A . D 4 HOH 14 414 46 HOH HOH A . D 4 HOH 15 415 67 HOH HOH A . D 4 HOH 16 416 48 HOH HOH A . D 4 HOH 17 417 174 HOH HOH A . D 4 HOH 18 418 10 HOH HOH A . D 4 HOH 19 419 123 HOH HOH A . D 4 HOH 20 420 168 HOH HOH A . D 4 HOH 21 421 39 HOH HOH A . D 4 HOH 22 422 35 HOH HOH A . D 4 HOH 23 423 37 HOH HOH A . D 4 HOH 24 424 186 HOH HOH A . D 4 HOH 25 425 44 HOH HOH A . D 4 HOH 26 426 16 HOH HOH A . D 4 HOH 27 427 64 HOH HOH A . D 4 HOH 28 428 33 HOH HOH A . D 4 HOH 29 429 51 HOH HOH A . D 4 HOH 30 430 72 HOH HOH A . D 4 HOH 31 431 25 HOH HOH A . D 4 HOH 32 432 59 HOH HOH A . D 4 HOH 33 433 14 HOH HOH A . D 4 HOH 34 434 43 HOH HOH A . D 4 HOH 35 435 8 HOH HOH A . D 4 HOH 36 436 88 HOH HOH A . D 4 HOH 37 437 27 HOH HOH A . D 4 HOH 38 438 91 HOH HOH A . D 4 HOH 39 439 5 HOH HOH A . D 4 HOH 40 440 21 HOH HOH A . D 4 HOH 41 441 53 HOH HOH A . D 4 HOH 42 442 9 HOH HOH A . D 4 HOH 43 443 24 HOH HOH A . D 4 HOH 44 444 12 HOH HOH A . D 4 HOH 45 445 6 HOH HOH A . D 4 HOH 46 446 23 HOH HOH A . D 4 HOH 47 447 38 HOH HOH A . D 4 HOH 48 448 165 HOH HOH A . D 4 HOH 49 449 29 HOH HOH A . D 4 HOH 50 450 58 HOH HOH A . D 4 HOH 51 451 77 HOH HOH A . D 4 HOH 52 452 177 HOH HOH A . D 4 HOH 53 453 184 HOH HOH A . D 4 HOH 54 454 36 HOH HOH A . D 4 HOH 55 455 1 HOH HOH A . D 4 HOH 56 456 60 HOH HOH A . D 4 HOH 57 457 2 HOH HOH A . D 4 HOH 58 458 86 HOH HOH A . D 4 HOH 59 459 40 HOH HOH A . D 4 HOH 60 460 20 HOH HOH A . D 4 HOH 61 461 173 HOH HOH A . D 4 HOH 62 462 32 HOH HOH A . D 4 HOH 63 463 55 HOH HOH A . D 4 HOH 64 464 22 HOH HOH A . D 4 HOH 65 465 18 HOH HOH A . D 4 HOH 66 466 180 HOH HOH A . D 4 HOH 67 467 157 HOH HOH A . D 4 HOH 68 468 129 HOH HOH A . D 4 HOH 69 469 200 HOH HOH A . D 4 HOH 70 470 161 HOH HOH A . D 4 HOH 71 471 156 HOH HOH A . D 4 HOH 72 472 104 HOH HOH A . D 4 HOH 73 473 97 HOH HOH A . D 4 HOH 74 474 192 HOH HOH A . D 4 HOH 75 475 153 HOH HOH A . D 4 HOH 76 476 68 HOH HOH A . D 4 HOH 77 477 70 HOH HOH A . D 4 HOH 78 478 182 HOH HOH A . D 4 HOH 79 479 111 HOH HOH A . D 4 HOH 80 480 63 HOH HOH A . D 4 HOH 81 481 79 HOH HOH A . D 4 HOH 82 482 76 HOH HOH A . D 4 HOH 83 483 124 HOH HOH A . D 4 HOH 84 484 162 HOH HOH A . D 4 HOH 85 485 52 HOH HOH A . D 4 HOH 86 486 98 HOH HOH A . D 4 HOH 87 487 87 HOH HOH A . D 4 HOH 88 488 130 HOH HOH A . D 4 HOH 89 489 149 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1510 ? 1 MORE -1 ? 1 'SSA (A^2)' 10290 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 130 ? A CYS 130 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 SG ? A CYS 133 ? A CYS 133 ? 1_555 111.2 ? 2 SG ? A CYS 130 ? A CYS 130 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 SG ? A CYS 150 ? A CYS 150 ? 1_555 106.9 ? 3 SG ? A CYS 133 ? A CYS 133 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 SG ? A CYS 150 ? A CYS 150 ? 1_555 114.2 ? 4 SG ? A CYS 130 ? A CYS 130 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 153 ? A ASP 153 ? 1_555 122.2 ? 5 SG ? A CYS 133 ? A CYS 133 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 153 ? A ASP 153 ? 1_555 95.9 ? 6 SG ? A CYS 150 ? A CYS 150 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 153 ? A ASP 153 ? 1_555 106.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-02-28 2 'Structure model' 1 1 2019-09-11 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -13.7413 12.3222 -5.3963 0.1076 0.0684 0.0558 -0.0128 0.0137 -0.0040 0.5291 1.2161 2.0315 -0.3156 -0.1592 0.5089 0.0448 0.0273 0.1664 0.1780 0.0135 -0.1290 0.3203 0.1608 -0.0583 'X-RAY DIFFRACTION' 2 ? refined -20.3896 23.8746 -18.2612 0.0990 0.0527 0.0381 -0.0283 -0.0044 0.0148 1.6923 3.3700 2.0870 0.4344 1.2905 -0.1956 -0.1145 0.0960 0.1647 -0.1265 0.0006 -0.1457 -0.1962 -0.0729 0.1138 'X-RAY DIFFRACTION' 3 ? refined -25.1434 28.8260 1.5032 0.0959 0.0949 0.0278 -0.0604 0.0402 -0.0172 0.2988 1.6424 2.1028 -0.3489 0.0329 1.5695 0.0109 0.0501 0.0099 0.0436 -0.1518 0.0801 0.0064 -0.1566 0.1410 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 30 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 61 ? ? A 126 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 165 ? ? A 213 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 A 31 ? ? A 60 ? ? ? ? 'X-RAY DIFFRACTION' 5 3 A 127 ? ? A 164 ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 24 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASP _pdbx_validate_close_contact.auth_seq_id_2 209 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 88 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 88 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 88 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.27 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.03 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 142 ? ? -159.55 63.46 2 1 GLN A 198 ? ? -93.28 59.79 3 1 LYS A 199 ? ? -163.73 -167.11 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 214 ? A GLY 214 2 1 Y 1 A ASN 215 ? A ASN 215 3 1 Y 1 A GLY 216 ? A GLY 216 4 1 Y 1 A GLN 217 ? A GLN 217 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 AP5 PA P N S 14 AP5 O1A O N N 15 AP5 O2A O N N 16 AP5 O3A O N N 17 AP5 PB P N S 18 AP5 O1B O N N 19 AP5 O2B O N N 20 AP5 O3B O N N 21 AP5 PG P N N 22 AP5 O1G O N N 23 AP5 O2G O N N 24 AP5 O3G O N N 25 AP5 PD P N S 26 AP5 O1D O N N 27 AP5 O2D O N N 28 AP5 O3D O N N 29 AP5 PE P N S 30 AP5 O1E O N N 31 AP5 O2E O N N 32 AP5 O5F O N N 33 AP5 C5F C N N 34 AP5 C4F C N R 35 AP5 O4F O N N 36 AP5 C3F C N S 37 AP5 O3F O N N 38 AP5 C2F C N R 39 AP5 O2F O N N 40 AP5 C1F C N R 41 AP5 N9A N Y N 42 AP5 C8A C Y N 43 AP5 N7A N Y N 44 AP5 C5A C Y N 45 AP5 C6A C Y N 46 AP5 N6A N N N 47 AP5 N1A N Y N 48 AP5 C2A C Y N 49 AP5 N3A N Y N 50 AP5 C4A C Y N 51 AP5 O5J O N N 52 AP5 C5J C N N 53 AP5 C4J C N R 54 AP5 O4J O N N 55 AP5 C3J C N S 56 AP5 O3J O N N 57 AP5 C2J C N R 58 AP5 O2J O N N 59 AP5 C1J C N R 60 AP5 N9B N Y N 61 AP5 C8B C Y N 62 AP5 N7B N Y N 63 AP5 C5B C Y N 64 AP5 C6B C Y N 65 AP5 N6B N N N 66 AP5 N1B N Y N 67 AP5 C2B C Y N 68 AP5 N3B N Y N 69 AP5 C4B C Y N 70 AP5 HOA2 H N N 71 AP5 HOB2 H N N 72 AP5 HOG2 H N N 73 AP5 HOD2 H N N 74 AP5 HOE2 H N N 75 AP5 H51A H N N 76 AP5 H52A H N N 77 AP5 H4F H N N 78 AP5 H3F H N N 79 AP5 HO3A H N N 80 AP5 H2F H N N 81 AP5 HO2A H N N 82 AP5 H1F H N N 83 AP5 H8A H N N 84 AP5 H61A H N N 85 AP5 H62A H N N 86 AP5 H2A H N N 87 AP5 H51B H N N 88 AP5 H52B H N N 89 AP5 H4J H N N 90 AP5 H3J H N N 91 AP5 HO3B H N N 92 AP5 H2J H N N 93 AP5 HO2B H N N 94 AP5 H1J H N N 95 AP5 H8B H N N 96 AP5 H61B H N N 97 AP5 H62B H N N 98 AP5 H2B H N N 99 ARG N N N N 100 ARG CA C N S 101 ARG C C N N 102 ARG O O N N 103 ARG CB C N N 104 ARG CG C N N 105 ARG CD C N N 106 ARG NE N N N 107 ARG CZ C N N 108 ARG NH1 N N N 109 ARG NH2 N N N 110 ARG OXT O N N 111 ARG H H N N 112 ARG H2 H N N 113 ARG HA H N N 114 ARG HB2 H N N 115 ARG HB3 H N N 116 ARG HG2 H N N 117 ARG HG3 H N N 118 ARG HD2 H N N 119 ARG HD3 H N N 120 ARG HE H N N 121 ARG HH11 H N N 122 ARG HH12 H N N 123 ARG HH21 H N N 124 ARG HH22 H N N 125 ARG HXT H N N 126 ASN N N N N 127 ASN CA C N S 128 ASN C C N N 129 ASN O O N N 130 ASN CB C N N 131 ASN CG C N N 132 ASN OD1 O N N 133 ASN ND2 N N N 134 ASN OXT O N N 135 ASN H H N N 136 ASN H2 H N N 137 ASN HA H N N 138 ASN HB2 H N N 139 ASN HB3 H N N 140 ASN HD21 H N N 141 ASN HD22 H N N 142 ASN HXT H N N 143 ASP N N N N 144 ASP CA C N S 145 ASP C C N N 146 ASP O O N N 147 ASP CB C N N 148 ASP CG C N N 149 ASP OD1 O N N 150 ASP OD2 O N N 151 ASP OXT O N N 152 ASP H H N N 153 ASP H2 H N N 154 ASP HA H N N 155 ASP HB2 H N N 156 ASP HB3 H N N 157 ASP HD2 H N N 158 ASP HXT H N N 159 CYS N N N N 160 CYS CA C N R 161 CYS C C N N 162 CYS O O N N 163 CYS CB C N N 164 CYS SG S N N 165 CYS OXT O N N 166 CYS H H N N 167 CYS H2 H N N 168 CYS HA H N N 169 CYS HB2 H N N 170 CYS HB3 H N N 171 CYS HG H N N 172 CYS HXT H N N 173 GLN N N N N 174 GLN CA C N S 175 GLN C C N N 176 GLN O O N N 177 GLN CB C N N 178 GLN CG C N N 179 GLN CD C N N 180 GLN OE1 O N N 181 GLN NE2 N N N 182 GLN OXT O N N 183 GLN H H N N 184 GLN H2 H N N 185 GLN HA H N N 186 GLN HB2 H N N 187 GLN HB3 H N N 188 GLN HG2 H N N 189 GLN HG3 H N N 190 GLN HE21 H N N 191 GLN HE22 H N N 192 GLN HXT H N N 193 GLU N N N N 194 GLU CA C N S 195 GLU C C N N 196 GLU O O N N 197 GLU CB C N N 198 GLU CG C N N 199 GLU CD C N N 200 GLU OE1 O N N 201 GLU OE2 O N N 202 GLU OXT O N N 203 GLU H H N N 204 GLU H2 H N N 205 GLU HA H N N 206 GLU HB2 H N N 207 GLU HB3 H N N 208 GLU HG2 H N N 209 GLU HG3 H N N 210 GLU HE2 H N N 211 GLU HXT H N N 212 GLY N N N N 213 GLY CA C N N 214 GLY C C N N 215 GLY O O N N 216 GLY OXT O N N 217 GLY H H N N 218 GLY H2 H N N 219 GLY HA2 H N N 220 GLY HA3 H N N 221 GLY HXT H N N 222 HIS N N N N 223 HIS CA C N S 224 HIS C C N N 225 HIS O O N N 226 HIS CB C N N 227 HIS CG C Y N 228 HIS ND1 N Y N 229 HIS CD2 C Y N 230 HIS CE1 C Y N 231 HIS NE2 N Y N 232 HIS OXT O N N 233 HIS H H N N 234 HIS H2 H N N 235 HIS HA H N N 236 HIS HB2 H N N 237 HIS HB3 H N N 238 HIS HD1 H N N 239 HIS HD2 H N N 240 HIS HE1 H N N 241 HIS HE2 H N N 242 HIS HXT H N N 243 HOH O O N N 244 HOH H1 H N N 245 HOH H2 H N N 246 ILE N N N N 247 ILE CA C N S 248 ILE C C N N 249 ILE O O N N 250 ILE CB C N S 251 ILE CG1 C N N 252 ILE CG2 C N N 253 ILE CD1 C N N 254 ILE OXT O N N 255 ILE H H N N 256 ILE H2 H N N 257 ILE HA H N N 258 ILE HB H N N 259 ILE HG12 H N N 260 ILE HG13 H N N 261 ILE HG21 H N N 262 ILE HG22 H N N 263 ILE HG23 H N N 264 ILE HD11 H N N 265 ILE HD12 H N N 266 ILE HD13 H N N 267 ILE HXT H N N 268 LEU N N N N 269 LEU CA C N S 270 LEU C C N N 271 LEU O O N N 272 LEU CB C N N 273 LEU CG C N N 274 LEU CD1 C N N 275 LEU CD2 C N N 276 LEU OXT O N N 277 LEU H H N N 278 LEU H2 H N N 279 LEU HA H N N 280 LEU HB2 H N N 281 LEU HB3 H N N 282 LEU HG H N N 283 LEU HD11 H N N 284 LEU HD12 H N N 285 LEU HD13 H N N 286 LEU HD21 H N N 287 LEU HD22 H N N 288 LEU HD23 H N N 289 LEU HXT H N N 290 LYS N N N N 291 LYS CA C N S 292 LYS C C N N 293 LYS O O N N 294 LYS CB C N N 295 LYS CG C N N 296 LYS CD C N N 297 LYS CE C N N 298 LYS NZ N N N 299 LYS OXT O N N 300 LYS H H N N 301 LYS H2 H N N 302 LYS HA H N N 303 LYS HB2 H N N 304 LYS HB3 H N N 305 LYS HG2 H N N 306 LYS HG3 H N N 307 LYS HD2 H N N 308 LYS HD3 H N N 309 LYS HE2 H N N 310 LYS HE3 H N N 311 LYS HZ1 H N N 312 LYS HZ2 H N N 313 LYS HZ3 H N N 314 LYS HXT H N N 315 MET N N N N 316 MET CA C N S 317 MET C C N N 318 MET O O N N 319 MET CB C N N 320 MET CG C N N 321 MET SD S N N 322 MET CE C N N 323 MET OXT O N N 324 MET H H N N 325 MET H2 H N N 326 MET HA H N N 327 MET HB2 H N N 328 MET HB3 H N N 329 MET HG2 H N N 330 MET HG3 H N N 331 MET HE1 H N N 332 MET HE2 H N N 333 MET HE3 H N N 334 MET HXT H N N 335 PHE N N N N 336 PHE CA C N S 337 PHE C C N N 338 PHE O O N N 339 PHE CB C N N 340 PHE CG C Y N 341 PHE CD1 C Y N 342 PHE CD2 C Y N 343 PHE CE1 C Y N 344 PHE CE2 C Y N 345 PHE CZ C Y N 346 PHE OXT O N N 347 PHE H H N N 348 PHE H2 H N N 349 PHE HA H N N 350 PHE HB2 H N N 351 PHE HB3 H N N 352 PHE HD1 H N N 353 PHE HD2 H N N 354 PHE HE1 H N N 355 PHE HE2 H N N 356 PHE HZ H N N 357 PHE HXT H N N 358 PRO N N N N 359 PRO CA C N S 360 PRO C C N N 361 PRO O O N N 362 PRO CB C N N 363 PRO CG C N N 364 PRO CD C N N 365 PRO OXT O N N 366 PRO H H N N 367 PRO HA H N N 368 PRO HB2 H N N 369 PRO HB3 H N N 370 PRO HG2 H N N 371 PRO HG3 H N N 372 PRO HD2 H N N 373 PRO HD3 H N N 374 PRO HXT H N N 375 SER N N N N 376 SER CA C N S 377 SER C C N N 378 SER O O N N 379 SER CB C N N 380 SER OG O N N 381 SER OXT O N N 382 SER H H N N 383 SER H2 H N N 384 SER HA H N N 385 SER HB2 H N N 386 SER HB3 H N N 387 SER HG H N N 388 SER HXT H N N 389 THR N N N N 390 THR CA C N S 391 THR C C N N 392 THR O O N N 393 THR CB C N R 394 THR OG1 O N N 395 THR CG2 C N N 396 THR OXT O N N 397 THR H H N N 398 THR H2 H N N 399 THR HA H N N 400 THR HB H N N 401 THR HG1 H N N 402 THR HG21 H N N 403 THR HG22 H N N 404 THR HG23 H N N 405 THR HXT H N N 406 TYR N N N N 407 TYR CA C N S 408 TYR C C N N 409 TYR O O N N 410 TYR CB C N N 411 TYR CG C Y N 412 TYR CD1 C Y N 413 TYR CD2 C Y N 414 TYR CE1 C Y N 415 TYR CE2 C Y N 416 TYR CZ C Y N 417 TYR OH O N N 418 TYR OXT O N N 419 TYR H H N N 420 TYR H2 H N N 421 TYR HA H N N 422 TYR HB2 H N N 423 TYR HB3 H N N 424 TYR HD1 H N N 425 TYR HD2 H N N 426 TYR HE1 H N N 427 TYR HE2 H N N 428 TYR HH H N N 429 TYR HXT H N N 430 VAL N N N N 431 VAL CA C N S 432 VAL C C N N 433 VAL O O N N 434 VAL CB C N N 435 VAL CG1 C N N 436 VAL CG2 C N N 437 VAL OXT O N N 438 VAL H H N N 439 VAL H2 H N N 440 VAL HA H N N 441 VAL HB H N N 442 VAL HG11 H N N 443 VAL HG12 H N N 444 VAL HG13 H N N 445 VAL HG21 H N N 446 VAL HG22 H N N 447 VAL HG23 H N N 448 VAL HXT H N N 449 ZN ZN ZN N N 450 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 AP5 PA O1A doub N N 13 AP5 PA O2A sing N N 14 AP5 PA O3A sing N N 15 AP5 PA O5F sing N N 16 AP5 O2A HOA2 sing N N 17 AP5 O3A PB sing N N 18 AP5 PB O1B doub N N 19 AP5 PB O2B sing N N 20 AP5 PB O3B sing N N 21 AP5 O2B HOB2 sing N N 22 AP5 O3B PG sing N N 23 AP5 PG O1G doub N N 24 AP5 PG O2G sing N N 25 AP5 PG O3G sing N N 26 AP5 O2G HOG2 sing N N 27 AP5 O3G PD sing N N 28 AP5 PD O1D doub N N 29 AP5 PD O2D sing N N 30 AP5 PD O3D sing N N 31 AP5 O2D HOD2 sing N N 32 AP5 O3D PE sing N N 33 AP5 PE O1E doub N N 34 AP5 PE O2E sing N N 35 AP5 PE O5J sing N N 36 AP5 O2E HOE2 sing N N 37 AP5 O5F C5F sing N N 38 AP5 C5F C4F sing N N 39 AP5 C5F H51A sing N N 40 AP5 C5F H52A sing N N 41 AP5 C4F O4F sing N N 42 AP5 C4F C3F sing N N 43 AP5 C4F H4F sing N N 44 AP5 O4F C1F sing N N 45 AP5 C3F O3F sing N N 46 AP5 C3F C2F sing N N 47 AP5 C3F H3F sing N N 48 AP5 O3F HO3A sing N N 49 AP5 C2F O2F sing N N 50 AP5 C2F C1F sing N N 51 AP5 C2F H2F sing N N 52 AP5 O2F HO2A sing N N 53 AP5 C1F N9A sing N N 54 AP5 C1F H1F sing N N 55 AP5 N9A C8A sing Y N 56 AP5 N9A C4A sing Y N 57 AP5 C8A N7A doub Y N 58 AP5 C8A H8A sing N N 59 AP5 N7A C5A sing Y N 60 AP5 C5A C6A sing Y N 61 AP5 C5A C4A doub Y N 62 AP5 C6A N6A sing N N 63 AP5 C6A N1A doub Y N 64 AP5 N6A H61A sing N N 65 AP5 N6A H62A sing N N 66 AP5 N1A C2A sing Y N 67 AP5 C2A N3A doub Y N 68 AP5 C2A H2A sing N N 69 AP5 N3A C4A sing Y N 70 AP5 O5J C5J sing N N 71 AP5 C5J C4J sing N N 72 AP5 C5J H51B sing N N 73 AP5 C5J H52B sing N N 74 AP5 C4J O4J sing N N 75 AP5 C4J C3J sing N N 76 AP5 C4J H4J sing N N 77 AP5 O4J C1J sing N N 78 AP5 C3J O3J sing N N 79 AP5 C3J C2J sing N N 80 AP5 C3J H3J sing N N 81 AP5 O3J HO3B sing N N 82 AP5 C2J O2J sing N N 83 AP5 C2J C1J sing N N 84 AP5 C2J H2J sing N N 85 AP5 O2J HO2B sing N N 86 AP5 C1J N9B sing N N 87 AP5 C1J H1J sing N N 88 AP5 N9B C8B sing Y N 89 AP5 N9B C4B sing Y N 90 AP5 C8B N7B doub Y N 91 AP5 C8B H8B sing N N 92 AP5 N7B C5B sing Y N 93 AP5 C5B C6B sing Y N 94 AP5 C5B C4B doub Y N 95 AP5 C6B N6B sing N N 96 AP5 C6B N1B doub Y N 97 AP5 N6B H61B sing N N 98 AP5 N6B H62B sing N N 99 AP5 N1B C2B sing Y N 100 AP5 C2B N3B doub Y N 101 AP5 C2B H2B sing N N 102 AP5 N3B C4B sing Y N 103 ARG N CA sing N N 104 ARG N H sing N N 105 ARG N H2 sing N N 106 ARG CA C sing N N 107 ARG CA CB sing N N 108 ARG CA HA sing N N 109 ARG C O doub N N 110 ARG C OXT sing N N 111 ARG CB CG sing N N 112 ARG CB HB2 sing N N 113 ARG CB HB3 sing N N 114 ARG CG CD sing N N 115 ARG CG HG2 sing N N 116 ARG CG HG3 sing N N 117 ARG CD NE sing N N 118 ARG CD HD2 sing N N 119 ARG CD HD3 sing N N 120 ARG NE CZ sing N N 121 ARG NE HE sing N N 122 ARG CZ NH1 sing N N 123 ARG CZ NH2 doub N N 124 ARG NH1 HH11 sing N N 125 ARG NH1 HH12 sing N N 126 ARG NH2 HH21 sing N N 127 ARG NH2 HH22 sing N N 128 ARG OXT HXT sing N N 129 ASN N CA sing N N 130 ASN N H sing N N 131 ASN N H2 sing N N 132 ASN CA C sing N N 133 ASN CA CB sing N N 134 ASN CA HA sing N N 135 ASN C O doub N N 136 ASN C OXT sing N N 137 ASN CB CG sing N N 138 ASN CB HB2 sing N N 139 ASN CB HB3 sing N N 140 ASN CG OD1 doub N N 141 ASN CG ND2 sing N N 142 ASN ND2 HD21 sing N N 143 ASN ND2 HD22 sing N N 144 ASN OXT HXT sing N N 145 ASP N CA sing N N 146 ASP N H sing N N 147 ASP N H2 sing N N 148 ASP CA C sing N N 149 ASP CA CB sing N N 150 ASP CA HA sing N N 151 ASP C O doub N N 152 ASP C OXT sing N N 153 ASP CB CG sing N N 154 ASP CB HB2 sing N N 155 ASP CB HB3 sing N N 156 ASP CG OD1 doub N N 157 ASP CG OD2 sing N N 158 ASP OD2 HD2 sing N N 159 ASP OXT HXT sing N N 160 CYS N CA sing N N 161 CYS N H sing N N 162 CYS N H2 sing N N 163 CYS CA C sing N N 164 CYS CA CB sing N N 165 CYS CA HA sing N N 166 CYS C O doub N N 167 CYS C OXT sing N N 168 CYS CB SG sing N N 169 CYS CB HB2 sing N N 170 CYS CB HB3 sing N N 171 CYS SG HG sing N N 172 CYS OXT HXT sing N N 173 GLN N CA sing N N 174 GLN N H sing N N 175 GLN N H2 sing N N 176 GLN CA C sing N N 177 GLN CA CB sing N N 178 GLN CA HA sing N N 179 GLN C O doub N N 180 GLN C OXT sing N N 181 GLN CB CG sing N N 182 GLN CB HB2 sing N N 183 GLN CB HB3 sing N N 184 GLN CG CD sing N N 185 GLN CG HG2 sing N N 186 GLN CG HG3 sing N N 187 GLN CD OE1 doub N N 188 GLN CD NE2 sing N N 189 GLN NE2 HE21 sing N N 190 GLN NE2 HE22 sing N N 191 GLN OXT HXT sing N N 192 GLU N CA sing N N 193 GLU N H sing N N 194 GLU N H2 sing N N 195 GLU CA C sing N N 196 GLU CA CB sing N N 197 GLU CA HA sing N N 198 GLU C O doub N N 199 GLU C OXT sing N N 200 GLU CB CG sing N N 201 GLU CB HB2 sing N N 202 GLU CB HB3 sing N N 203 GLU CG CD sing N N 204 GLU CG HG2 sing N N 205 GLU CG HG3 sing N N 206 GLU CD OE1 doub N N 207 GLU CD OE2 sing N N 208 GLU OE2 HE2 sing N N 209 GLU OXT HXT sing N N 210 GLY N CA sing N N 211 GLY N H sing N N 212 GLY N H2 sing N N 213 GLY CA C sing N N 214 GLY CA HA2 sing N N 215 GLY CA HA3 sing N N 216 GLY C O doub N N 217 GLY C OXT sing N N 218 GLY OXT HXT sing N N 219 HIS N CA sing N N 220 HIS N H sing N N 221 HIS N H2 sing N N 222 HIS CA C sing N N 223 HIS CA CB sing N N 224 HIS CA HA sing N N 225 HIS C O doub N N 226 HIS C OXT sing N N 227 HIS CB CG sing N N 228 HIS CB HB2 sing N N 229 HIS CB HB3 sing N N 230 HIS CG ND1 sing Y N 231 HIS CG CD2 doub Y N 232 HIS ND1 CE1 doub Y N 233 HIS ND1 HD1 sing N N 234 HIS CD2 NE2 sing Y N 235 HIS CD2 HD2 sing N N 236 HIS CE1 NE2 sing Y N 237 HIS CE1 HE1 sing N N 238 HIS NE2 HE2 sing N N 239 HIS OXT HXT sing N N 240 HOH O H1 sing N N 241 HOH O H2 sing N N 242 ILE N CA sing N N 243 ILE N H sing N N 244 ILE N H2 sing N N 245 ILE CA C sing N N 246 ILE CA CB sing N N 247 ILE CA HA sing N N 248 ILE C O doub N N 249 ILE C OXT sing N N 250 ILE CB CG1 sing N N 251 ILE CB CG2 sing N N 252 ILE CB HB sing N N 253 ILE CG1 CD1 sing N N 254 ILE CG1 HG12 sing N N 255 ILE CG1 HG13 sing N N 256 ILE CG2 HG21 sing N N 257 ILE CG2 HG22 sing N N 258 ILE CG2 HG23 sing N N 259 ILE CD1 HD11 sing N N 260 ILE CD1 HD12 sing N N 261 ILE CD1 HD13 sing N N 262 ILE OXT HXT sing N N 263 LEU N CA sing N N 264 LEU N H sing N N 265 LEU N H2 sing N N 266 LEU CA C sing N N 267 LEU CA CB sing N N 268 LEU CA HA sing N N 269 LEU C O doub N N 270 LEU C OXT sing N N 271 LEU CB CG sing N N 272 LEU CB HB2 sing N N 273 LEU CB HB3 sing N N 274 LEU CG CD1 sing N N 275 LEU CG CD2 sing N N 276 LEU CG HG sing N N 277 LEU CD1 HD11 sing N N 278 LEU CD1 HD12 sing N N 279 LEU CD1 HD13 sing N N 280 LEU CD2 HD21 sing N N 281 LEU CD2 HD22 sing N N 282 LEU CD2 HD23 sing N N 283 LEU OXT HXT sing N N 284 LYS N CA sing N N 285 LYS N H sing N N 286 LYS N H2 sing N N 287 LYS CA C sing N N 288 LYS CA CB sing N N 289 LYS CA HA sing N N 290 LYS C O doub N N 291 LYS C OXT sing N N 292 LYS CB CG sing N N 293 LYS CB HB2 sing N N 294 LYS CB HB3 sing N N 295 LYS CG CD sing N N 296 LYS CG HG2 sing N N 297 LYS CG HG3 sing N N 298 LYS CD CE sing N N 299 LYS CD HD2 sing N N 300 LYS CD HD3 sing N N 301 LYS CE NZ sing N N 302 LYS CE HE2 sing N N 303 LYS CE HE3 sing N N 304 LYS NZ HZ1 sing N N 305 LYS NZ HZ2 sing N N 306 LYS NZ HZ3 sing N N 307 LYS OXT HXT sing N N 308 MET N CA sing N N 309 MET N H sing N N 310 MET N H2 sing N N 311 MET CA C sing N N 312 MET CA CB sing N N 313 MET CA HA sing N N 314 MET C O doub N N 315 MET C OXT sing N N 316 MET CB CG sing N N 317 MET CB HB2 sing N N 318 MET CB HB3 sing N N 319 MET CG SD sing N N 320 MET CG HG2 sing N N 321 MET CG HG3 sing N N 322 MET SD CE sing N N 323 MET CE HE1 sing N N 324 MET CE HE2 sing N N 325 MET CE HE3 sing N N 326 MET OXT HXT sing N N 327 PHE N CA sing N N 328 PHE N H sing N N 329 PHE N H2 sing N N 330 PHE CA C sing N N 331 PHE CA CB sing N N 332 PHE CA HA sing N N 333 PHE C O doub N N 334 PHE C OXT sing N N 335 PHE CB CG sing N N 336 PHE CB HB2 sing N N 337 PHE CB HB3 sing N N 338 PHE CG CD1 doub Y N 339 PHE CG CD2 sing Y N 340 PHE CD1 CE1 sing Y N 341 PHE CD1 HD1 sing N N 342 PHE CD2 CE2 doub Y N 343 PHE CD2 HD2 sing N N 344 PHE CE1 CZ doub Y N 345 PHE CE1 HE1 sing N N 346 PHE CE2 CZ sing Y N 347 PHE CE2 HE2 sing N N 348 PHE CZ HZ sing N N 349 PHE OXT HXT sing N N 350 PRO N CA sing N N 351 PRO N CD sing N N 352 PRO N H sing N N 353 PRO CA C sing N N 354 PRO CA CB sing N N 355 PRO CA HA sing N N 356 PRO C O doub N N 357 PRO C OXT sing N N 358 PRO CB CG sing N N 359 PRO CB HB2 sing N N 360 PRO CB HB3 sing N N 361 PRO CG CD sing N N 362 PRO CG HG2 sing N N 363 PRO CG HG3 sing N N 364 PRO CD HD2 sing N N 365 PRO CD HD3 sing N N 366 PRO OXT HXT sing N N 367 SER N CA sing N N 368 SER N H sing N N 369 SER N H2 sing N N 370 SER CA C sing N N 371 SER CA CB sing N N 372 SER CA HA sing N N 373 SER C O doub N N 374 SER C OXT sing N N 375 SER CB OG sing N N 376 SER CB HB2 sing N N 377 SER CB HB3 sing N N 378 SER OG HG sing N N 379 SER OXT HXT sing N N 380 THR N CA sing N N 381 THR N H sing N N 382 THR N H2 sing N N 383 THR CA C sing N N 384 THR CA CB sing N N 385 THR CA HA sing N N 386 THR C O doub N N 387 THR C OXT sing N N 388 THR CB OG1 sing N N 389 THR CB CG2 sing N N 390 THR CB HB sing N N 391 THR OG1 HG1 sing N N 392 THR CG2 HG21 sing N N 393 THR CG2 HG22 sing N N 394 THR CG2 HG23 sing N N 395 THR OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 "BIS(ADENOSINE)-5'-PENTAPHOSPHATE" AP5 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1S3G _pdbx_initial_refinement_model.details ? #