HEADER CHAPERONE 27-FEB-17 5X7V TITLE CRYSTAL STRUCTURE OF NUCLEOSOME ASSEMBLY PROTEIN S (PFNAPS) FROM TITLE 2 PLASMODIUM FALCIPARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSOME ASSEMBLY PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: UNP RESIDUES 29-221; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 5833; SOURCE 4 GENE: B7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOSOME ASSEMBLY PROTEIN, HISTONE RECOGNITION, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR J.GILL,M.YOGAVEL,A.SHARMA REVDAT 2 27-MAR-24 5X7V 1 REMARK REVDAT 1 15-MAR-17 5X7V 0 SPRSDE 15-MAR-17 5X7V 3KYP JRNL AUTH J.GILL,A.KUMAR,M.YOGAVEL,H.BELRHALI,S.K.JAIN,M.RUG,M.BROWN, JRNL AUTH 2 A.G.MAIER,A.SHARMA JRNL TITL STRUCTURE, LOCALIZATION AND HISTONE BINDING PROPERTIES OF JRNL TITL 2 NUCLEAR-ASSOCIATED NUCLEOSOME ASSEMBLY PROTEIN FROM JRNL TITL 3 PLASMODIUM FALCIPARUM. JRNL REF MALAR. J. V. 9 90 2010 JRNL REFN ESSN 1475-2875 JRNL PMID 20377878 JRNL DOI 10.1186/1475-2875-9-90 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.1 REMARK 3 NUMBER OF REFLECTIONS : 34206 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.312 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1697 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2452 - 6.3947 0.99 3181 167 0.2182 0.3026 REMARK 3 2 6.3947 - 5.0843 0.99 3076 161 0.2478 0.2797 REMARK 3 3 5.0843 - 4.4442 0.99 3010 160 0.1966 0.2612 REMARK 3 4 4.4442 - 4.0390 0.98 2972 155 0.2080 0.2705 REMARK 3 5 4.0390 - 3.7501 0.97 2930 148 0.2271 0.3038 REMARK 3 6 3.7501 - 3.5294 0.96 2893 153 0.2298 0.3411 REMARK 3 7 3.5294 - 3.3529 0.95 2856 151 0.2604 0.2973 REMARK 3 8 3.3529 - 3.2072 0.92 2753 145 0.2984 0.3577 REMARK 3 9 3.2072 - 3.0838 0.85 2542 137 0.3071 0.3856 REMARK 3 10 3.0838 - 2.9775 0.77 2307 122 0.3045 0.3317 REMARK 3 11 2.9775 - 2.8845 0.71 2117 109 0.3396 0.4971 REMARK 3 12 2.8845 - 2.8021 0.62 1872 89 0.3679 0.4529 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 44.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 8832 REMARK 3 ANGLE : 1.452 11893 REMARK 3 CHIRALITY : 0.058 1263 REMARK 3 PLANARITY : 0.007 1509 REMARK 3 DIHEDRAL : 17.626 3377 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5X7V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1300003058. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35024 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M DI-AMMONUIUM REMARK 280 TATRATE, VAPOR DIFFUSION, HANGING DROP, PH 5, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 47.89500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.55000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.55000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.89500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 169 REMARK 465 THR A 170 REMARK 465 HIS A 171 REMARK 465 ASN A 172 REMARK 465 ARG A 173 REMARK 465 SER A 174 REMARK 465 ASP A 175 REMARK 465 LEU A 176 REMARK 465 ASP A 177 REMARK 465 ASN A 178 REMARK 465 GLU A 179 REMARK 465 ILE A 180 REMARK 465 GLY A 218 REMARK 465 LEU A 219 REMARK 465 GLU A 220 REMARK 465 GLU A 221 REMARK 465 GLU B 153 REMARK 465 CYS B 154 REMARK 465 THR B 155 REMARK 465 ARG B 156 REMARK 465 ASN B 164 REMARK 465 PRO B 165 REMARK 465 ILE B 166 REMARK 465 ALA B 167 REMARK 465 ALA B 168 REMARK 465 VAL B 169 REMARK 465 THR B 170 REMARK 465 HIS B 171 REMARK 465 ASN B 172 REMARK 465 ARG B 173 REMARK 465 SER B 174 REMARK 465 ASP B 175 REMARK 465 LEU B 176 REMARK 465 ASP B 177 REMARK 465 ASN B 178 REMARK 465 GLU B 179 REMARK 465 ILE B 180 REMARK 465 PRO B 181 REMARK 465 LYS B 182 REMARK 465 ASP B 192 REMARK 465 GLU B 193 REMARK 465 LEU B 194 REMARK 465 GLN B 195 REMARK 465 ASP B 196 REMARK 465 LYS B 197 REMARK 465 GLY B 218 REMARK 465 LEU B 219 REMARK 465 GLU B 220 REMARK 465 GLU B 221 REMARK 465 THR C 170 REMARK 465 HIS C 171 REMARK 465 ASN C 172 REMARK 465 ARG C 173 REMARK 465 SER C 174 REMARK 465 ASP C 175 REMARK 465 LEU C 176 REMARK 465 ASP C 177 REMARK 465 ASN C 178 REMARK 465 GLU C 179 REMARK 465 GLY C 218 REMARK 465 LEU C 219 REMARK 465 GLU C 220 REMARK 465 GLU C 221 REMARK 465 ASP D 145 REMARK 465 ASN D 146 REMARK 465 ASN D 147 REMARK 465 GLN D 148 REMARK 465 GLU D 149 REMARK 465 LYS D 150 REMARK 465 THR D 170 REMARK 465 HIS D 171 REMARK 465 ASN D 172 REMARK 465 ARG D 173 REMARK 465 SER D 174 REMARK 465 ASP D 175 REMARK 465 LEU D 176 REMARK 465 ASP D 177 REMARK 465 ASN D 178 REMARK 465 GLU D 179 REMARK 465 ILE D 180 REMARK 465 GLY D 218 REMARK 465 LEU D 219 REMARK 465 GLU D 220 REMARK 465 GLU D 221 REMARK 465 PHE E 144 REMARK 465 ASP E 145 REMARK 465 ASN E 146 REMARK 465 ASN E 147 REMARK 465 GLN E 148 REMARK 465 THR E 170 REMARK 465 HIS E 171 REMARK 465 ASN E 172 REMARK 465 ARG E 173 REMARK 465 SER E 174 REMARK 465 ASP E 175 REMARK 465 LEU E 176 REMARK 465 ASP E 177 REMARK 465 ASN E 178 REMARK 465 GLU E 179 REMARK 465 ILE E 180 REMARK 465 ASP E 192 REMARK 465 GLU E 193 REMARK 465 LEU E 194 REMARK 465 GLN E 195 REMARK 465 ASP E 196 REMARK 465 LYS E 197 REMARK 465 GLY E 218 REMARK 465 LEU E 219 REMARK 465 GLU E 220 REMARK 465 GLU E 221 REMARK 465 ASN F 147 REMARK 465 GLN F 148 REMARK 465 THR F 170 REMARK 465 HIS F 171 REMARK 465 ASN F 172 REMARK 465 ARG F 173 REMARK 465 SER F 174 REMARK 465 ASP F 175 REMARK 465 LEU F 176 REMARK 465 ASP F 177 REMARK 465 ASN F 178 REMARK 465 GLU F 179 REMARK 465 ILE F 180 REMARK 465 THR F 190 REMARK 465 THR F 191 REMARK 465 ASP F 192 REMARK 465 GLU F 193 REMARK 465 LEU F 194 REMARK 465 GLN F 195 REMARK 465 ASP F 196 REMARK 465 LYS F 197 REMARK 465 GLY F 218 REMARK 465 LEU F 219 REMARK 465 GLU F 220 REMARK 465 GLU F 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 134 OE1 OE2 REMARK 470 ASN A 147 CG OD1 ND2 REMARK 470 LYS A 150 CE NZ REMARK 470 ARG A 156 CZ NH1 NH2 REMARK 470 GLU A 193 CG CD OE1 OE2 REMARK 470 GLN A 195 CG CD OE1 NE2 REMARK 470 PHE B 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 94 CG1 CG2 REMARK 470 LYS B 110 CG CD CE NZ REMARK 470 LYS B 140 CE NZ REMARK 470 GLN B 148 OE1 NE2 REMARK 470 GLU B 149 CG CD OE1 OE2 REMARK 470 LYS B 150 CG CD CE NZ REMARK 470 GLU B 187 CG CD OE1 OE2 REMARK 470 PHE C 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP C 114 CG OD1 OD2 REMARK 470 ASN C 115 CG OD1 ND2 REMARK 470 ASN C 116 CG OD1 ND2 REMARK 470 GLU C 134 CG CD OE1 OE2 REMARK 470 ASN C 146 CG OD1 ND2 REMARK 470 ASN C 147 CG OD1 ND2 REMARK 470 GLN C 148 CG CD OE1 NE2 REMARK 470 GLU C 149 CG CD OE1 OE2 REMARK 470 ASP C 192 CG OD1 OD2 REMARK 470 GLU C 193 CG CD OE1 OE2 REMARK 470 LEU C 194 CG CD1 CD2 REMARK 470 GLN C 195 CG CD OE1 NE2 REMARK 470 ASP C 196 CG OD1 OD2 REMARK 470 ARG C 206 CG CD NE CZ NH1 NH2 REMARK 470 PHE D 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER D 91 OG REMARK 470 ASP D 92 CG OD1 OD2 REMARK 470 PHE E 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS E 61 CG CD CE NZ REMARK 470 ASP E 114 CG OD1 OD2 REMARK 470 LYS E 150 CG CD CE NZ REMARK 470 ASN E 164 CG OD1 ND2 REMARK 470 ARG E 206 CG CD NE CZ NH1 NH2 REMARK 470 PHE F 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS F 87 CG ND1 CD2 CE1 NE2 REMARK 470 LYS F 110 CG CD CE NZ REMARK 470 ASP F 111 CG OD1 OD2 REMARK 470 ASN F 115 CG OD1 ND2 REMARK 470 GLU F 134 CG CD OE1 OE2 REMARK 470 LYS F 150 CE NZ REMARK 470 VAL F 151 CG1 CG2 REMARK 470 GLU F 153 CD OE1 OE2 REMARK 470 LYS F 158 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 51 NE2 GLN B 51 2.01 REMARK 500 O ARG C 69 N GLU C 71 2.16 REMARK 500 CE MET F 133 CZ3 TRP F 159 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 95 C - N - CA ANGL. DEV. = 9.7 DEGREES REMARK 500 PRO F 64 C - N - CA ANGL. DEV. = -10.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 92 54.33 -105.79 REMARK 500 ASN A 115 38.17 -90.01 REMARK 500 ASP A 145 -81.13 -113.10 REMARK 500 ASN A 146 61.48 -116.60 REMARK 500 ASN A 147 7.70 56.81 REMARK 500 ALA A 167 62.15 -106.48 REMARK 500 LEU A 194 77.01 -112.39 REMARK 500 SER B 91 3.18 -64.96 REMARK 500 ASN B 112 67.05 38.67 REMARK 500 ASN B 147 -64.87 -140.06 REMARK 500 PHE B 189 39.42 -81.94 REMARK 500 ASN B 211 87.24 -153.83 REMARK 500 ASP C 70 -23.24 -37.73 REMARK 500 ASP C 114 -31.72 -150.30 REMARK 500 ALA C 129 3.67 -65.24 REMARK 500 ASN C 146 -136.95 56.34 REMARK 500 GLN C 148 2.70 -158.01 REMARK 500 ALA C 167 96.86 -69.43 REMARK 500 THR C 190 170.37 176.59 REMARK 500 ASP C 192 22.45 39.71 REMARK 500 GLN C 195 -28.82 -148.75 REMARK 500 TRP C 209 -40.74 77.63 REMARK 500 ASN C 211 47.71 -152.41 REMARK 500 VAL D 94 134.53 -38.33 REMARK 500 ASN D 102 -9.72 -55.72 REMARK 500 ASN D 115 5.76 -67.51 REMARK 500 ASN D 164 108.51 -59.54 REMARK 500 THR D 190 -156.15 -136.68 REMARK 500 ASP D 199 59.64 77.76 REMARK 500 ASP E 92 51.50 -93.97 REMARK 500 ASP E 114 -117.19 56.53 REMARK 500 GLU E 153 49.59 -141.29 REMARK 500 CYS E 154 176.51 -53.45 REMARK 500 THR E 190 -166.20 -127.81 REMARK 500 LYS F 110 -20.64 -32.61 REMARK 500 GLU F 207 -38.18 -141.55 REMARK 500 REMARK 500 REMARK: NULL DBREF 5X7V A 29 221 UNP Q9Y010 Q9Y010_PLAFA 29 221 DBREF 5X7V B 29 221 UNP Q9Y010 Q9Y010_PLAFA 29 221 DBREF 5X7V C 29 221 UNP Q9Y010 Q9Y010_PLAFA 29 221 DBREF 5X7V D 29 221 UNP Q9Y010 Q9Y010_PLAFA 29 221 DBREF 5X7V E 29 221 UNP Q9Y010 Q9Y010_PLAFA 29 221 DBREF 5X7V F 29 221 UNP Q9Y010 Q9Y010_PLAFA 29 221 SEQRES 1 A 193 PHE MET GLN ASP PHE GLU ASP ILE GLN LYS ASP ILE GLU SEQRES 2 A 193 GLN LEU ASP ILE LYS CYS ALA HIS GLU GLN MET ASN ILE SEQRES 3 A 193 GLN LYS GLN TYR ASP GLU LYS LYS LYS PRO LEU PHE GLU SEQRES 4 A 193 LYS ARG ASP GLU ILE ILE GLN LYS ILE PRO GLY PHE TRP SEQRES 5 A 193 ALA ASN THR LEU ARG LYS HIS PRO ALA LEU SER ASP ILE SEQRES 6 A 193 VAL PRO GLU ASP ILE ASP ILE LEU ASN HIS LEU VAL LYS SEQRES 7 A 193 LEU ASP LEU LYS ASP ASN MET ASP ASN ASN GLY SER TYR SEQRES 8 A 193 LYS ILE THR PHE ILE PHE GLY GLU LYS ALA LYS GLU PHE SEQRES 9 A 193 MET GLU PRO LEU THR LEU VAL LYS HIS VAL THR PHE ASP SEQRES 10 A 193 ASN ASN GLN GLU LYS VAL VAL GLU CYS THR ARG ILE LYS SEQRES 11 A 193 TRP LYS GLU GLY LYS ASN PRO ILE ALA ALA VAL THR HIS SEQRES 12 A 193 ASN ARG SER ASP LEU ASP ASN GLU ILE PRO LYS TRP SER SEQRES 13 A 193 ILE PHE GLU TRP PHE THR THR ASP GLU LEU GLN ASP LYS SEQRES 14 A 193 PRO ASP VAL GLY GLU LEU ILE ARG ARG GLU ILE TRP HIS SEQRES 15 A 193 ASN PRO LEU SER TYR TYR LEU GLY LEU GLU GLU SEQRES 1 B 193 PHE MET GLN ASP PHE GLU ASP ILE GLN LYS ASP ILE GLU SEQRES 2 B 193 GLN LEU ASP ILE LYS CYS ALA HIS GLU GLN MET ASN ILE SEQRES 3 B 193 GLN LYS GLN TYR ASP GLU LYS LYS LYS PRO LEU PHE GLU SEQRES 4 B 193 LYS ARG ASP GLU ILE ILE GLN LYS ILE PRO GLY PHE TRP SEQRES 5 B 193 ALA ASN THR LEU ARG LYS HIS PRO ALA LEU SER ASP ILE SEQRES 6 B 193 VAL PRO GLU ASP ILE ASP ILE LEU ASN HIS LEU VAL LYS SEQRES 7 B 193 LEU ASP LEU LYS ASP ASN MET ASP ASN ASN GLY SER TYR SEQRES 8 B 193 LYS ILE THR PHE ILE PHE GLY GLU LYS ALA LYS GLU PHE SEQRES 9 B 193 MET GLU PRO LEU THR LEU VAL LYS HIS VAL THR PHE ASP SEQRES 10 B 193 ASN ASN GLN GLU LYS VAL VAL GLU CYS THR ARG ILE LYS SEQRES 11 B 193 TRP LYS GLU GLY LYS ASN PRO ILE ALA ALA VAL THR HIS SEQRES 12 B 193 ASN ARG SER ASP LEU ASP ASN GLU ILE PRO LYS TRP SER SEQRES 13 B 193 ILE PHE GLU TRP PHE THR THR ASP GLU LEU GLN ASP LYS SEQRES 14 B 193 PRO ASP VAL GLY GLU LEU ILE ARG ARG GLU ILE TRP HIS SEQRES 15 B 193 ASN PRO LEU SER TYR TYR LEU GLY LEU GLU GLU SEQRES 1 C 193 PHE MET GLN ASP PHE GLU ASP ILE GLN LYS ASP ILE GLU SEQRES 2 C 193 GLN LEU ASP ILE LYS CYS ALA HIS GLU GLN MET ASN ILE SEQRES 3 C 193 GLN LYS GLN TYR ASP GLU LYS LYS LYS PRO LEU PHE GLU SEQRES 4 C 193 LYS ARG ASP GLU ILE ILE GLN LYS ILE PRO GLY PHE TRP SEQRES 5 C 193 ALA ASN THR LEU ARG LYS HIS PRO ALA LEU SER ASP ILE SEQRES 6 C 193 VAL PRO GLU ASP ILE ASP ILE LEU ASN HIS LEU VAL LYS SEQRES 7 C 193 LEU ASP LEU LYS ASP ASN MET ASP ASN ASN GLY SER TYR SEQRES 8 C 193 LYS ILE THR PHE ILE PHE GLY GLU LYS ALA LYS GLU PHE SEQRES 9 C 193 MET GLU PRO LEU THR LEU VAL LYS HIS VAL THR PHE ASP SEQRES 10 C 193 ASN ASN GLN GLU LYS VAL VAL GLU CYS THR ARG ILE LYS SEQRES 11 C 193 TRP LYS GLU GLY LYS ASN PRO ILE ALA ALA VAL THR HIS SEQRES 12 C 193 ASN ARG SER ASP LEU ASP ASN GLU ILE PRO LYS TRP SER SEQRES 13 C 193 ILE PHE GLU TRP PHE THR THR ASP GLU LEU GLN ASP LYS SEQRES 14 C 193 PRO ASP VAL GLY GLU LEU ILE ARG ARG GLU ILE TRP HIS SEQRES 15 C 193 ASN PRO LEU SER TYR TYR LEU GLY LEU GLU GLU SEQRES 1 D 193 PHE MET GLN ASP PHE GLU ASP ILE GLN LYS ASP ILE GLU SEQRES 2 D 193 GLN LEU ASP ILE LYS CYS ALA HIS GLU GLN MET ASN ILE SEQRES 3 D 193 GLN LYS GLN TYR ASP GLU LYS LYS LYS PRO LEU PHE GLU SEQRES 4 D 193 LYS ARG ASP GLU ILE ILE GLN LYS ILE PRO GLY PHE TRP SEQRES 5 D 193 ALA ASN THR LEU ARG LYS HIS PRO ALA LEU SER ASP ILE SEQRES 6 D 193 VAL PRO GLU ASP ILE ASP ILE LEU ASN HIS LEU VAL LYS SEQRES 7 D 193 LEU ASP LEU LYS ASP ASN MET ASP ASN ASN GLY SER TYR SEQRES 8 D 193 LYS ILE THR PHE ILE PHE GLY GLU LYS ALA LYS GLU PHE SEQRES 9 D 193 MET GLU PRO LEU THR LEU VAL LYS HIS VAL THR PHE ASP SEQRES 10 D 193 ASN ASN GLN GLU LYS VAL VAL GLU CYS THR ARG ILE LYS SEQRES 11 D 193 TRP LYS GLU GLY LYS ASN PRO ILE ALA ALA VAL THR HIS SEQRES 12 D 193 ASN ARG SER ASP LEU ASP ASN GLU ILE PRO LYS TRP SER SEQRES 13 D 193 ILE PHE GLU TRP PHE THR THR ASP GLU LEU GLN ASP LYS SEQRES 14 D 193 PRO ASP VAL GLY GLU LEU ILE ARG ARG GLU ILE TRP HIS SEQRES 15 D 193 ASN PRO LEU SER TYR TYR LEU GLY LEU GLU GLU SEQRES 1 E 193 PHE MET GLN ASP PHE GLU ASP ILE GLN LYS ASP ILE GLU SEQRES 2 E 193 GLN LEU ASP ILE LYS CYS ALA HIS GLU GLN MET ASN ILE SEQRES 3 E 193 GLN LYS GLN TYR ASP GLU LYS LYS LYS PRO LEU PHE GLU SEQRES 4 E 193 LYS ARG ASP GLU ILE ILE GLN LYS ILE PRO GLY PHE TRP SEQRES 5 E 193 ALA ASN THR LEU ARG LYS HIS PRO ALA LEU SER ASP ILE SEQRES 6 E 193 VAL PRO GLU ASP ILE ASP ILE LEU ASN HIS LEU VAL LYS SEQRES 7 E 193 LEU ASP LEU LYS ASP ASN MET ASP ASN ASN GLY SER TYR SEQRES 8 E 193 LYS ILE THR PHE ILE PHE GLY GLU LYS ALA LYS GLU PHE SEQRES 9 E 193 MET GLU PRO LEU THR LEU VAL LYS HIS VAL THR PHE ASP SEQRES 10 E 193 ASN ASN GLN GLU LYS VAL VAL GLU CYS THR ARG ILE LYS SEQRES 11 E 193 TRP LYS GLU GLY LYS ASN PRO ILE ALA ALA VAL THR HIS SEQRES 12 E 193 ASN ARG SER ASP LEU ASP ASN GLU ILE PRO LYS TRP SER SEQRES 13 E 193 ILE PHE GLU TRP PHE THR THR ASP GLU LEU GLN ASP LYS SEQRES 14 E 193 PRO ASP VAL GLY GLU LEU ILE ARG ARG GLU ILE TRP HIS SEQRES 15 E 193 ASN PRO LEU SER TYR TYR LEU GLY LEU GLU GLU SEQRES 1 F 193 PHE MET GLN ASP PHE GLU ASP ILE GLN LYS ASP ILE GLU SEQRES 2 F 193 GLN LEU ASP ILE LYS CYS ALA HIS GLU GLN MET ASN ILE SEQRES 3 F 193 GLN LYS GLN TYR ASP GLU LYS LYS LYS PRO LEU PHE GLU SEQRES 4 F 193 LYS ARG ASP GLU ILE ILE GLN LYS ILE PRO GLY PHE TRP SEQRES 5 F 193 ALA ASN THR LEU ARG LYS HIS PRO ALA LEU SER ASP ILE SEQRES 6 F 193 VAL PRO GLU ASP ILE ASP ILE LEU ASN HIS LEU VAL LYS SEQRES 7 F 193 LEU ASP LEU LYS ASP ASN MET ASP ASN ASN GLY SER TYR SEQRES 8 F 193 LYS ILE THR PHE ILE PHE GLY GLU LYS ALA LYS GLU PHE SEQRES 9 F 193 MET GLU PRO LEU THR LEU VAL LYS HIS VAL THR PHE ASP SEQRES 10 F 193 ASN ASN GLN GLU LYS VAL VAL GLU CYS THR ARG ILE LYS SEQRES 11 F 193 TRP LYS GLU GLY LYS ASN PRO ILE ALA ALA VAL THR HIS SEQRES 12 F 193 ASN ARG SER ASP LEU ASP ASN GLU ILE PRO LYS TRP SER SEQRES 13 F 193 ILE PHE GLU TRP PHE THR THR ASP GLU LEU GLN ASP LYS SEQRES 14 F 193 PRO ASP VAL GLY GLU LEU ILE ARG ARG GLU ILE TRP HIS SEQRES 15 F 193 ASN PRO LEU SER TYR TYR LEU GLY LEU GLU GLU HELIX 1 AA1 PHE A 29 GLN A 74 1 46 HELIX 2 AA2 GLY A 78 ARG A 85 1 8 HELIX 3 AA3 LYS A 86 SER A 91 5 6 HELIX 4 AA4 PRO A 95 ASN A 102 1 8 HELIX 5 AA5 GLU A 127 PHE A 132 5 6 HELIX 6 AA6 SER A 184 PHE A 189 5 6 HELIX 7 AA7 ASP A 199 ILE A 208 1 10 HELIX 8 AA8 PRO A 212 LEU A 217 1 6 HELIX 9 AA9 MET B 30 GLN B 74 1 45 HELIX 10 AB1 GLY B 78 ARG B 85 1 8 HELIX 11 AB2 HIS B 87 SER B 91 5 5 HELIX 12 AB3 VAL B 94 ASN B 102 1 9 HELIX 13 AB4 GLU B 127 LYS B 130 5 4 HELIX 14 AB5 SER B 184 PHE B 189 5 6 HELIX 15 AB6 ASP B 199 ILE B 208 1 10 HELIX 16 AB7 PRO B 212 LEU B 217 1 6 HELIX 17 AB8 MET C 30 GLN C 74 1 45 HELIX 18 AB9 GLY C 78 ARG C 85 1 8 HELIX 19 AC1 LYS C 86 SER C 91 5 6 HELIX 20 AC2 PRO C 95 ASN C 102 1 8 HELIX 21 AC3 GLU C 127 PHE C 132 5 6 HELIX 22 AC4 SER C 184 PHE C 189 5 6 HELIX 23 AC5 ASP C 199 GLU C 207 1 9 HELIX 24 AC6 ASN C 211 LEU C 217 1 7 HELIX 25 AC7 MET D 30 GLN D 74 1 45 HELIX 26 AC8 GLY D 78 ARG D 85 1 8 HELIX 27 AC9 LYS D 86 SER D 91 5 6 HELIX 28 AD1 VAL D 94 ASN D 102 1 9 HELIX 29 AD2 GLU D 127 GLU D 131 5 5 HELIX 30 AD3 ASN D 164 VAL D 169 5 6 HELIX 31 AD4 SER D 184 PHE D 189 5 6 HELIX 32 AD5 ASP D 199 ILE D 208 1 10 HELIX 33 AD6 ASN D 211 LEU D 217 1 7 HELIX 34 AD7 MET E 30 GLN E 74 1 45 HELIX 35 AD8 GLY E 78 ARG E 85 1 8 HELIX 36 AD9 LYS E 86 SER E 91 5 6 HELIX 37 AE1 VAL E 94 ASN E 102 1 9 HELIX 38 AE2 GLU E 127 GLU E 131 5 5 HELIX 39 AE3 SER E 184 PHE E 189 5 6 HELIX 40 AE4 ASP E 199 GLU E 207 1 9 HELIX 41 AE5 ASN E 211 LEU E 217 1 7 HELIX 42 AE6 MET F 30 GLN F 74 1 45 HELIX 43 AE7 GLY F 78 ARG F 85 1 8 HELIX 44 AE8 VAL F 94 ASN F 102 1 9 HELIX 45 AE9 GLU F 127 GLU F 131 5 5 HELIX 46 AF1 SER F 184 PHE F 189 5 6 HELIX 47 AF2 ASP F 199 GLU F 207 1 9 HELIX 48 AF3 ASN F 211 LEU F 217 1 7 SHEET 1 AA1 4 LEU A 104 LYS A 110 0 SHEET 2 AA1 4 TYR A 119 PHE A 125 -1 O ILE A 124 N LYS A 106 SHEET 3 AA1 4 THR A 137 PHE A 144 -1 O VAL A 142 N TYR A 119 SHEET 4 AA1 4 GLU A 149 CYS A 154 -1 O LYS A 150 N THR A 143 SHEET 1 AA2 4 LEU B 104 LYS B 110 0 SHEET 2 AA2 4 TYR B 119 PHE B 125 -1 O ILE B 124 N LYS B 106 SHEET 3 AA2 4 THR B 137 PHE B 144 -1 O LEU B 138 N PHE B 123 SHEET 4 AA2 4 GLU B 149 VAL B 152 -1 O LYS B 150 N THR B 143 SHEET 1 AA3 2 MET B 133 GLU B 134 0 SHEET 2 AA3 2 LYS B 158 TRP B 159 -1 O LYS B 158 N GLU B 134 SHEET 1 AA4 4 LEU C 104 ASP C 111 0 SHEET 2 AA4 4 TYR C 119 PHE C 125 -1 O THR C 122 N ASP C 108 SHEET 3 AA4 4 THR C 137 VAL C 142 -1 O LEU C 138 N PHE C 123 SHEET 4 AA4 4 VAL C 152 CYS C 154 -1 O GLU C 153 N HIS C 141 SHEET 1 AA5 4 LEU D 104 ASP D 114 0 SHEET 2 AA5 4 SER D 118 PHE D 125 -1 O LYS D 120 N LYS D 110 SHEET 3 AA5 4 THR D 137 VAL D 142 -1 O LEU D 138 N PHE D 123 SHEET 4 AA5 4 VAL D 152 CYS D 154 -1 O GLU D 153 N HIS D 141 SHEET 1 AA6 2 MET D 133 GLU D 134 0 SHEET 2 AA6 2 LYS D 158 TRP D 159 -1 O LYS D 158 N GLU D 134 SHEET 1 AA7 3 LEU E 104 MET E 113 0 SHEET 2 AA7 3 SER E 118 PHE E 125 -1 O LYS E 120 N LYS E 110 SHEET 3 AA7 3 THR E 137 VAL E 142 -1 O VAL E 142 N TYR E 119 SHEET 1 AA8 2 MET E 133 GLU E 134 0 SHEET 2 AA8 2 LYS E 158 TRP E 159 -1 O LYS E 158 N GLU E 134 SHEET 1 AA9 4 LEU F 104 ASN F 115 0 SHEET 2 AA9 4 SER F 118 PHE F 125 -1 O ILE F 124 N LYS F 106 SHEET 3 AA9 4 THR F 137 VAL F 142 -1 O LEU F 138 N PHE F 123 SHEET 4 AA9 4 GLU F 153 CYS F 154 -1 O GLU F 153 N HIS F 141 SHEET 1 AB1 2 MET F 133 GLU F 134 0 SHEET 2 AB1 2 LYS F 158 TRP F 159 -1 O LYS F 158 N GLU F 134 CISPEP 1 GLU A 134 PRO A 135 0 -5.10 CISPEP 2 GLU B 134 PRO B 135 0 -6.15 CISPEP 3 GLU C 134 PRO C 135 0 -0.29 CISPEP 4 GLU D 134 PRO D 135 0 -2.77 CISPEP 5 GLU E 134 PRO E 135 0 3.60 CISPEP 6 GLU F 134 PRO F 135 0 22.76 CRYST1 95.790 114.900 139.100 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010440 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008703 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007189 0.00000