data_5XG4
#
_entry.id 5XG4
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 5XG4 pdb_00005xg4 10.2210/pdb5xg4/pdb
WWPDB D_1300003454 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2017-07-26
2 'Structure model' 1 1 2017-08-02
3 'Structure model' 1 2 2023-11-22
4 'Structure model' 1 3 2024-11-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Refinement description'
5 4 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 3 'Structure model' chem_comp_atom
3 3 'Structure model' chem_comp_bond
4 3 'Structure model' database_2
5 3 'Structure model' pdbx_initial_refinement_model
6 4 'Structure model' pdbx_entry_details
7 4 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_volume'
2 2 'Structure model' '_citation.page_first'
3 2 'Structure model' '_citation.page_last'
4 3 'Structure model' '_database_2.pdbx_DOI'
5 3 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 5XG4
_pdbx_database_status.recvd_initial_deposition_date 2017-04-11
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBJ
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Jiang, L.' 1 ?
'Huang, M.' 2 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country ?
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Food Funct'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 2042-650X
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 8
_citation.language ?
_citation.page_first 2437
_citation.page_last 2443
_citation.title 'A structural mechanism of flavonoids in inhibiting serine proteases'
_citation.year 2017
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1039/c6fo01825d
_citation.pdbx_database_id_PubMed 28644504
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Xue, G.' 1 ?
primary 'Gong, L.' 2 ?
primary 'Yuan, C.' 3 ?
primary 'Xu, M.' 4 ?
primary 'Wang, X.' 5 ?
primary 'Jiang, L.' 6 ?
primary 'Huang, M.' 7 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'Urokinase-type plasminogen activator' 27715.600 1 3.4.21.73 ? 'UNP residues 179-424'
?
2 non-polymer syn "3,5,7,3',4'-PENTAHYDROXYFLAVONE" 302.236 1 ? ? ?
?
3 non-polymer syn '1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE' 266.331 1 ? ? ?
?
4 water nat water 18.015 17 ? ? ?
?
#
_entity_name_com.entity_id 1
_entity_name_com.name uPA
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN
LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTIALPSMYNDPQFGTSCEITGFGKEQSTDYLYPEQLKMTVVK
LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW
IRSHTK
;
_entity_poly.pdbx_seq_one_letter_code_can
;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN
LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTIALPSMYNDPQFGTSCEITGFGKEQSTDYLYPEQLKMTVVK
LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW
IRSHTK
;
_entity_poly.pdbx_strand_id U
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 "3,5,7,3',4'-PENTAHYDROXYFLAVONE" QUE
3 '1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE' PG6
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ILE n
1 2 ILE n
1 3 GLY n
1 4 GLY n
1 5 GLU n
1 6 PHE n
1 7 THR n
1 8 THR n
1 9 ILE n
1 10 GLU n
1 11 ASN n
1 12 GLN n
1 13 PRO n
1 14 TRP n
1 15 PHE n
1 16 ALA n
1 17 ALA n
1 18 ILE n
1 19 TYR n
1 20 ARG n
1 21 ARG n
1 22 HIS n
1 23 ARG n
1 24 GLY n
1 25 GLY n
1 26 SER n
1 27 VAL n
1 28 THR n
1 29 TYR n
1 30 VAL n
1 31 CYS n
1 32 GLY n
1 33 GLY n
1 34 SER n
1 35 LEU n
1 36 ILE n
1 37 SER n
1 38 PRO n
1 39 CYS n
1 40 TRP n
1 41 VAL n
1 42 ILE n
1 43 SER n
1 44 ALA n
1 45 THR n
1 46 HIS n
1 47 CYS n
1 48 PHE n
1 49 ILE n
1 50 ASP n
1 51 TYR n
1 52 PRO n
1 53 LYS n
1 54 LYS n
1 55 GLU n
1 56 ASP n
1 57 TYR n
1 58 ILE n
1 59 VAL n
1 60 TYR n
1 61 LEU n
1 62 GLY n
1 63 ARG n
1 64 SER n
1 65 ARG n
1 66 LEU n
1 67 ASN n
1 68 SER n
1 69 ASN n
1 70 THR n
1 71 GLN n
1 72 GLY n
1 73 GLU n
1 74 MET n
1 75 LYS n
1 76 PHE n
1 77 GLU n
1 78 VAL n
1 79 GLU n
1 80 ASN n
1 81 LEU n
1 82 ILE n
1 83 LEU n
1 84 HIS n
1 85 LYS n
1 86 ASP n
1 87 TYR n
1 88 SER n
1 89 ALA n
1 90 ASP n
1 91 THR n
1 92 LEU n
1 93 ALA n
1 94 HIS n
1 95 HIS n
1 96 ASN n
1 97 ASP n
1 98 ILE n
1 99 ALA n
1 100 LEU n
1 101 LEU n
1 102 LYS n
1 103 ILE n
1 104 ARG n
1 105 SER n
1 106 LYS n
1 107 GLU n
1 108 GLY n
1 109 ARG n
1 110 CYS n
1 111 ALA n
1 112 GLN n
1 113 PRO n
1 114 SER n
1 115 ARG n
1 116 THR n
1 117 ILE n
1 118 GLN n
1 119 THR n
1 120 ILE n
1 121 ALA n
1 122 LEU n
1 123 PRO n
1 124 SER n
1 125 MET n
1 126 TYR n
1 127 ASN n
1 128 ASP n
1 129 PRO n
1 130 GLN n
1 131 PHE n
1 132 GLY n
1 133 THR n
1 134 SER n
1 135 CYS n
1 136 GLU n
1 137 ILE n
1 138 THR n
1 139 GLY n
1 140 PHE n
1 141 GLY n
1 142 LYS n
1 143 GLU n
1 144 GLN n
1 145 SER n
1 146 THR n
1 147 ASP n
1 148 TYR n
1 149 LEU n
1 150 TYR n
1 151 PRO n
1 152 GLU n
1 153 GLN n
1 154 LEU n
1 155 LYS n
1 156 MET n
1 157 THR n
1 158 VAL n
1 159 VAL n
1 160 LYS n
1 161 LEU n
1 162 ILE n
1 163 SER n
1 164 HIS n
1 165 ARG n
1 166 GLU n
1 167 CYS n
1 168 GLN n
1 169 GLN n
1 170 PRO n
1 171 HIS n
1 172 TYR n
1 173 TYR n
1 174 GLY n
1 175 SER n
1 176 GLU n
1 177 VAL n
1 178 THR n
1 179 THR n
1 180 LYS n
1 181 MET n
1 182 LEU n
1 183 CYS n
1 184 ALA n
1 185 ALA n
1 186 ASP n
1 187 PRO n
1 188 GLN n
1 189 TRP n
1 190 LYS n
1 191 THR n
1 192 ASP n
1 193 SER n
1 194 CYS n
1 195 GLN n
1 196 GLY n
1 197 ASP n
1 198 SER n
1 199 GLY n
1 200 GLY n
1 201 PRO n
1 202 LEU n
1 203 VAL n
1 204 CYS n
1 205 SER n
1 206 LEU n
1 207 GLN n
1 208 GLY n
1 209 ARG n
1 210 MET n
1 211 THR n
1 212 LEU n
1 213 THR n
1 214 GLY n
1 215 ILE n
1 216 VAL n
1 217 SER n
1 218 TRP n
1 219 GLY n
1 220 ARG n
1 221 GLY n
1 222 CYS n
1 223 ALA n
1 224 LEU n
1 225 LYS n
1 226 ASP n
1 227 LYS n
1 228 PRO n
1 229 GLY n
1 230 VAL n
1 231 TYR n
1 232 THR n
1 233 ARG n
1 234 VAL n
1 235 SER n
1 236 HIS n
1 237 PHE n
1 238 LEU n
1 239 PRO n
1 240 TRP n
1 241 ILE n
1 242 ARG n
1 243 SER n
1 244 HIS n
1 245 THR n
1 246 LYS n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type 'Biological sequence'
_entity_src_gen.pdbx_beg_seq_num 1
_entity_src_gen.pdbx_end_seq_num 246
_entity_src_gen.gene_src_common_name Human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene PLAU
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Komagataella pastoris'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PG6 non-polymer . '1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE' ? 'C12 H26 O6' 266.331
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
QUE non-polymer . "3,5,7,3',4'-PENTAHYDROXYFLAVONE" QUERCETIN 'C15 H10 O7' 302.236
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ILE 1 16 16 ILE ILE U . n
A 1 2 ILE 2 17 17 ILE ILE U . n
A 1 3 GLY 3 18 18 GLY GLY U . n
A 1 4 GLY 4 19 19 GLY GLY U . n
A 1 5 GLU 5 20 20 GLU GLU U . n
A 1 6 PHE 6 21 21 PHE PHE U . n
A 1 7 THR 7 22 22 THR THR U . n
A 1 8 THR 8 23 23 THR THR U . n
A 1 9 ILE 9 24 24 ILE ILE U . n
A 1 10 GLU 10 25 25 GLU GLU U . n
A 1 11 ASN 11 26 26 ASN ASN U . n
A 1 12 GLN 12 27 27 GLN GLN U . n
A 1 13 PRO 13 28 28 PRO PRO U . n
A 1 14 TRP 14 29 29 TRP TRP U . n
A 1 15 PHE 15 30 30 PHE PHE U . n
A 1 16 ALA 16 31 31 ALA ALA U . n
A 1 17 ALA 17 32 32 ALA ALA U . n
A 1 18 ILE 18 33 33 ILE ILE U . n
A 1 19 TYR 19 34 34 TYR TYR U . n
A 1 20 ARG 20 35 35 ARG ARG U . n
A 1 21 ARG 21 36 36 ARG ARG U . n
A 1 22 HIS 22 37 37 HIS HIS U . n
A 1 23 ARG 23 37 37 ARG ARG U A n
A 1 24 GLY 24 37 37 GLY GLY U B n
A 1 25 GLY 25 37 37 GLY GLY U C n
A 1 26 SER 26 37 37 SER SER U D n
A 1 27 VAL 27 38 38 VAL VAL U . n
A 1 28 THR 28 39 39 THR THR U . n
A 1 29 TYR 29 40 40 TYR TYR U . n
A 1 30 VAL 30 41 41 VAL VAL U . n
A 1 31 CYS 31 42 42 CYS CYS U . n
A 1 32 GLY 32 43 43 GLY GLY U . n
A 1 33 GLY 33 44 44 GLY GLY U . n
A 1 34 SER 34 45 45 SER SER U . n
A 1 35 LEU 35 46 46 LEU LEU U . n
A 1 36 ILE 36 47 47 ILE ILE U . n
A 1 37 SER 37 48 48 SER SER U . n
A 1 38 PRO 38 49 49 PRO PRO U . n
A 1 39 CYS 39 50 50 CYS CYS U . n
A 1 40 TRP 40 51 51 TRP TRP U . n
A 1 41 VAL 41 52 52 VAL VAL U . n
A 1 42 ILE 42 53 53 ILE ILE U . n
A 1 43 SER 43 54 54 SER SER U . n
A 1 44 ALA 44 55 55 ALA ALA U . n
A 1 45 THR 45 56 56 THR THR U . n
A 1 46 HIS 46 57 57 HIS HIS U . n
A 1 47 CYS 47 58 58 CYS CYS U . n
A 1 48 PHE 48 59 59 PHE PHE U . n
A 1 49 ILE 49 60 60 ILE ILE U . n
A 1 50 ASP 50 60 60 ASP ASP U A n
A 1 51 TYR 51 60 60 TYR TYR U B n
A 1 52 PRO 52 60 60 PRO PRO U C n
A 1 53 LYS 53 61 61 LYS LYS U . n
A 1 54 LYS 54 62 62 LYS LYS U . n
A 1 55 GLU 55 62 62 GLU GLU U A n
A 1 56 ASP 56 63 63 ASP ASP U . n
A 1 57 TYR 57 64 64 TYR TYR U . n
A 1 58 ILE 58 65 65 ILE ILE U . n
A 1 59 VAL 59 66 66 VAL VAL U . n
A 1 60 TYR 60 67 67 TYR TYR U . n
A 1 61 LEU 61 68 68 LEU LEU U . n
A 1 62 GLY 62 69 69 GLY GLY U . n
A 1 63 ARG 63 70 70 ARG ARG U . n
A 1 64 SER 64 71 71 SER SER U . n
A 1 65 ARG 65 72 72 ARG ARG U . n
A 1 66 LEU 66 73 73 LEU LEU U . n
A 1 67 ASN 67 74 74 ASN ASN U . n
A 1 68 SER 68 75 75 SER SER U . n
A 1 69 ASN 69 76 76 ASN ASN U . n
A 1 70 THR 70 77 77 THR THR U . n
A 1 71 GLN 71 78 78 GLN GLN U . n
A 1 72 GLY 72 79 79 GLY GLY U . n
A 1 73 GLU 73 80 80 GLU GLU U . n
A 1 74 MET 74 81 81 MET MET U . n
A 1 75 LYS 75 82 82 LYS LYS U . n
A 1 76 PHE 76 83 83 PHE PHE U . n
A 1 77 GLU 77 84 84 GLU GLU U . n
A 1 78 VAL 78 85 85 VAL VAL U . n
A 1 79 GLU 79 86 86 GLU GLU U . n
A 1 80 ASN 80 87 87 ASN ASN U . n
A 1 81 LEU 81 88 88 LEU LEU U . n
A 1 82 ILE 82 89 89 ILE ILE U . n
A 1 83 LEU 83 90 90 LEU LEU U . n
A 1 84 HIS 84 91 91 HIS HIS U . n
A 1 85 LYS 85 92 92 LYS LYS U . n
A 1 86 ASP 86 93 93 ASP ASP U . n
A 1 87 TYR 87 94 94 TYR TYR U . n
A 1 88 SER 88 95 95 SER SER U . n
A 1 89 ALA 89 96 96 ALA ALA U . n
A 1 90 ASP 90 97 97 ASP ASP U . n
A 1 91 THR 91 97 97 THR THR U A n
A 1 92 LEU 92 97 97 LEU LEU U B n
A 1 93 ALA 93 98 98 ALA ALA U . n
A 1 94 HIS 94 99 99 HIS HIS U . n
A 1 95 HIS 95 100 100 HIS HIS U . n
A 1 96 ASN 96 101 101 ASN ASN U . n
A 1 97 ASP 97 102 102 ASP ASP U . n
A 1 98 ILE 98 103 103 ILE ILE U . n
A 1 99 ALA 99 104 104 ALA ALA U . n
A 1 100 LEU 100 105 105 LEU LEU U . n
A 1 101 LEU 101 106 106 LEU LEU U . n
A 1 102 LYS 102 107 107 LYS LYS U . n
A 1 103 ILE 103 108 108 ILE ILE U . n
A 1 104 ARG 104 109 109 ARG ARG U . n
A 1 105 SER 105 110 110 SER SER U . n
A 1 106 LYS 106 110 110 LYS LYS U A n
A 1 107 GLU 107 110 110 GLU GLU U B n
A 1 108 GLY 108 110 110 GLY GLY U C n
A 1 109 ARG 109 110 110 ARG ARG U D n
A 1 110 CYS 110 111 111 CYS CYS U . n
A 1 111 ALA 111 112 112 ALA ALA U . n
A 1 112 GLN 112 113 113 GLN GLN U . n
A 1 113 PRO 113 114 114 PRO PRO U . n
A 1 114 SER 114 115 115 SER SER U . n
A 1 115 ARG 115 116 116 ARG ARG U . n
A 1 116 THR 116 117 117 THR THR U . n
A 1 117 ILE 117 118 118 ILE ILE U . n
A 1 118 GLN 118 119 119 GLN GLN U . n
A 1 119 THR 119 120 120 THR THR U . n
A 1 120 ILE 120 121 121 ILE ILE U . n
A 1 121 ALA 121 122 122 ALA ALA U . n
A 1 122 LEU 122 123 123 LEU LEU U . n
A 1 123 PRO 123 124 124 PRO PRO U . n
A 1 124 SER 124 125 125 SER SER U . n
A 1 125 MET 125 126 126 MET MET U . n
A 1 126 TYR 126 127 127 TYR TYR U . n
A 1 127 ASN 127 128 128 ASN ASN U . n
A 1 128 ASP 128 129 129 ASP ASP U . n
A 1 129 PRO 129 130 130 PRO PRO U . n
A 1 130 GLN 130 131 131 GLN GLN U . n
A 1 131 PHE 131 132 132 PHE PHE U . n
A 1 132 GLY 132 133 133 GLY GLY U . n
A 1 133 THR 133 134 134 THR THR U . n
A 1 134 SER 134 135 135 SER SER U . n
A 1 135 CYS 135 136 136 CYS CYS U . n
A 1 136 GLU 136 137 137 GLU GLU U . n
A 1 137 ILE 137 138 138 ILE ILE U . n
A 1 138 THR 138 139 139 THR THR U . n
A 1 139 GLY 139 140 140 GLY GLY U . n
A 1 140 PHE 140 141 141 PHE PHE U . n
A 1 141 GLY 141 142 142 GLY GLY U . n
A 1 142 LYS 142 143 143 LYS LYS U . n
A 1 143 GLU 143 144 144 GLU GLU U . n
A 1 144 GLN 144 145 145 GLN GLN U . n
A 1 145 SER 145 146 146 SER SER U . n
A 1 146 THR 146 147 147 THR THR U . n
A 1 147 ASP 147 148 148 ASP ASP U . n
A 1 148 TYR 148 149 149 TYR TYR U . n
A 1 149 LEU 149 150 150 LEU LEU U . n
A 1 150 TYR 150 151 151 TYR TYR U . n
A 1 151 PRO 151 152 152 PRO PRO U . n
A 1 152 GLU 152 153 153 GLU GLU U . n
A 1 153 GLN 153 154 154 GLN GLN U . n
A 1 154 LEU 154 155 155 LEU LEU U . n
A 1 155 LYS 155 156 156 LYS LYS U . n
A 1 156 MET 156 157 157 MET MET U . n
A 1 157 THR 157 158 158 THR THR U . n
A 1 158 VAL 158 159 159 VAL VAL U . n
A 1 159 VAL 159 160 160 VAL VAL U . n
A 1 160 LYS 160 161 161 LYS LYS U . n
A 1 161 LEU 161 162 162 LEU LEU U . n
A 1 162 ILE 162 163 163 ILE ILE U . n
A 1 163 SER 163 164 164 SER SER U . n
A 1 164 HIS 164 165 165 HIS HIS U . n
A 1 165 ARG 165 166 166 ARG ARG U . n
A 1 166 GLU 166 167 167 GLU GLU U . n
A 1 167 CYS 167 168 168 CYS CYS U . n
A 1 168 GLN 168 169 169 GLN GLN U . n
A 1 169 GLN 169 170 170 GLN GLN U . n
A 1 170 PRO 170 170 170 PRO PRO U A n
A 1 171 HIS 171 170 170 HIS HIS U B n
A 1 172 TYR 172 171 171 TYR TYR U . n
A 1 173 TYR 173 172 172 TYR TYR U . n
A 1 174 GLY 174 173 173 GLY GLY U . n
A 1 175 SER 175 174 174 SER SER U . n
A 1 176 GLU 176 175 175 GLU GLU U . n
A 1 177 VAL 177 176 176 VAL VAL U . n
A 1 178 THR 178 177 177 THR THR U . n
A 1 179 THR 179 178 178 THR THR U . n
A 1 180 LYS 180 179 179 LYS LYS U . n
A 1 181 MET 181 180 180 MET MET U . n
A 1 182 LEU 182 181 181 LEU LEU U . n
A 1 183 CYS 183 182 182 CYS CYS U . n
A 1 184 ALA 184 183 183 ALA ALA U . n
A 1 185 ALA 185 184 184 ALA ALA U . n
A 1 186 ASP 186 185 185 ASP ASP U . n
A 1 187 PRO 187 185 185 PRO PRO U A n
A 1 188 GLN 188 185 185 GLN GLN U B n
A 1 189 TRP 189 186 186 TRP TRP U . n
A 1 190 LYS 190 187 187 LYS LYS U . n
A 1 191 THR 191 188 188 THR THR U . n
A 1 192 ASP 192 189 189 ASP ASP U . n
A 1 193 SER 193 190 190 SER SER U . n
A 1 194 CYS 194 191 191 CYS CYS U . n
A 1 195 GLN 195 192 192 GLN GLN U . n
A 1 196 GLY 196 193 193 GLY GLY U . n
A 1 197 ASP 197 194 194 ASP ASP U . n
A 1 198 SER 198 195 195 SER SER U . n
A 1 199 GLY 199 196 196 GLY GLY U . n
A 1 200 GLY 200 197 197 GLY GLY U . n
A 1 201 PRO 201 198 198 PRO PRO U . n
A 1 202 LEU 202 199 199 LEU LEU U . n
A 1 203 VAL 203 200 200 VAL VAL U . n
A 1 204 CYS 204 201 201 CYS CYS U . n
A 1 205 SER 205 202 202 SER SER U . n
A 1 206 LEU 206 203 203 LEU LEU U . n
A 1 207 GLN 207 204 204 GLN GLN U . n
A 1 208 GLY 208 205 205 GLY GLY U . n
A 1 209 ARG 209 206 206 ARG ARG U . n
A 1 210 MET 210 207 207 MET MET U . n
A 1 211 THR 211 208 208 THR THR U . n
A 1 212 LEU 212 209 209 LEU LEU U . n
A 1 213 THR 213 210 210 THR THR U . n
A 1 214 GLY 214 211 211 GLY GLY U . n
A 1 215 ILE 215 212 212 ILE ILE U . n
A 1 216 VAL 216 213 213 VAL VAL U . n
A 1 217 SER 217 214 214 SER SER U . n
A 1 218 TRP 218 215 215 TRP TRP U . n
A 1 219 GLY 219 216 216 GLY GLY U . n
A 1 220 ARG 220 217 217 ARG ARG U . n
A 1 221 GLY 221 219 219 GLY GLY U . n
A 1 222 CYS 222 220 220 CYS CYS U . n
A 1 223 ALA 223 221 221 ALA ALA U . n
A 1 224 LEU 224 222 222 LEU LEU U . n
A 1 225 LYS 225 223 223 LYS LYS U . n
A 1 226 ASP 226 223 223 ASP ASP U A n
A 1 227 LYS 227 224 224 LYS LYS U . n
A 1 228 PRO 228 225 225 PRO PRO U . n
A 1 229 GLY 229 226 226 GLY GLY U . n
A 1 230 VAL 230 227 227 VAL VAL U . n
A 1 231 TYR 231 228 228 TYR TYR U . n
A 1 232 THR 232 229 229 THR THR U . n
A 1 233 ARG 233 230 230 ARG ARG U . n
A 1 234 VAL 234 231 231 VAL VAL U . n
A 1 235 SER 235 232 232 SER SER U . n
A 1 236 HIS 236 233 233 HIS HIS U . n
A 1 237 PHE 237 234 234 PHE PHE U . n
A 1 238 LEU 238 235 235 LEU LEU U . n
A 1 239 PRO 239 236 236 PRO PRO U . n
A 1 240 TRP 240 237 237 TRP TRP U . n
A 1 241 ILE 241 238 238 ILE ILE U . n
A 1 242 ARG 242 239 239 ARG ARG U . n
A 1 243 SER 243 240 240 SER SER U . n
A 1 244 HIS 244 241 241 HIS HIS U . n
A 1 245 THR 245 242 242 THR THR U . n
A 1 246 LYS 246 243 243 LYS LYS U . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 QUE 1 301 301 QUE QUE U .
C 3 PG6 1 302 302 PG6 PG6 U .
D 4 HOH 1 401 401 HOH HOH U .
D 4 HOH 2 402 402 HOH HOH U .
D 4 HOH 3 403 403 HOH HOH U .
D 4 HOH 4 404 404 HOH HOH U .
D 4 HOH 5 405 405 HOH HOH U .
D 4 HOH 6 406 406 HOH HOH U .
D 4 HOH 7 407 407 HOH HOH U .
D 4 HOH 8 408 408 HOH HOH U .
D 4 HOH 9 409 409 HOH HOH U .
D 4 HOH 10 410 410 HOH HOH U .
D 4 HOH 11 411 411 HOH HOH U .
D 4 HOH 12 412 412 HOH HOH U .
D 4 HOH 13 413 413 HOH HOH U .
D 4 HOH 14 414 414 HOH HOH U .
D 4 HOH 15 415 415 HOH HOH U .
D 4 HOH 16 416 416 HOH HOH U .
D 4 HOH 17 417 417 HOH HOH U .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 N 1 U PG6 302 ? C1 ? C PG6 1 C1
2 1 N 1 U PG6 302 ? C8 ? C PG6 1 C8
3 1 N 1 U PG6 302 ? C9 ? C PG6 1 C9
4 1 N 1 U PG6 302 ? O5 ? C PG6 1 O5
5 1 N 1 U PG6 302 ? C10 ? C PG6 1 C10
6 1 N 1 U PG6 302 ? C11 ? C PG6 1 C11
7 1 N 1 U PG6 302 ? O6 ? C PG6 1 O6
8 1 N 1 U PG6 302 ? C12 ? C PG6 1 C12
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1
? 'data processing' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 120.00
_cell.angle_gamma_esd ?
_cell.entry_id 5XG4
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 119.969
_cell.length_a_esd ?
_cell.length_b 119.969
_cell.length_b_esd ?
_cell.length_c 41.780
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 9
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 5XG4
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 146
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'H 3'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 5XG4
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 2.09
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 41.08
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '50mM sodium citrate at pH 4.6, 1.95M (NH4)2SO4, 0.03% NaN3, 5% PEG 400'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'DECTRIS PILATUS 6M'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2012-08-14
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.987
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'NFPSS BEAMLINE BL19U1'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.987
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline BL19U1
_diffrn_source.pdbx_synchrotron_site NFPSS
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 5XG4
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 3.000
_reflns.d_resolution_low 50.000
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 4317
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 96.4
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 3.100
_reflns.pdbx_Rmerge_I_obs 0.059
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 43.3000
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_R_split ?
#
_reflns_shell.d_res_high .
_reflns_shell.d_res_low ?
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs ?
_reflns_shell.percent_possible_all ?
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 0.108
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_R_split ?
#
_refine.aniso_B[1][1] -0.25000
_refine.aniso_B[1][2] -0.12000
_refine.aniso_B[1][3] 0.00000
_refine.aniso_B[2][2] -0.25000
_refine.aniso_B[2][3] 0.00000
_refine.aniso_B[3][3] 0.80000
_refine.B_iso_max ?
_refine.B_iso_mean 54.74
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc 0.934
_refine.correlation_coeff_Fo_to_Fc_free 0.866
_refine.details
;HYDROGENS HAVE BEEN ADDED IN THE RIDING
POSITIONS
;
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 5XG4
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 3.00
_refine.ls_d_res_low 50.00
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 4100
_refine.ls_number_reflns_R_free 217
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 96.3
_refine.ls_percent_reflns_R_free 5.000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.175
_refine.ls_R_factor_R_free 0.258
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.170
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 4DVA
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free 0.558
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 20.809
_refine.overall_SU_ML 0.375
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1942
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 32
_refine_hist.number_atoms_solvent 17
_refine_hist.number_atoms_total 1991
_refine_hist.d_res_high 3.00
_refine_hist.d_res_low 50.00
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.009 0.019 2032 ? r_bond_refined_d ? ?
'X-RAY DIFFRACTION' ? 0.002 0.020 1873 ? r_bond_other_d ? ?
'X-RAY DIFFRACTION' ? 1.413 1.964 2754 ? r_angle_refined_deg ? ?
'X-RAY DIFFRACTION' ? 0.927 3.000 4323 ? r_angle_other_deg ? ?
'X-RAY DIFFRACTION' ? 7.491 5.000 244 ? r_dihedral_angle_1_deg ? ?
'X-RAY DIFFRACTION' ? 35.418 23.218 87 ? r_dihedral_angle_2_deg ? ?
'X-RAY DIFFRACTION' ? 17.171 15.000 339 ? r_dihedral_angle_3_deg ? ?
'X-RAY DIFFRACTION' ? 20.780 15.000 13 ? r_dihedral_angle_4_deg ? ?
'X-RAY DIFFRACTION' ? 0.078 0.200 292 ? r_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.005 0.021 2258 ? r_gen_planes_refined ? ?
'X-RAY DIFFRACTION' ? 0.001 0.020 474 ? r_gen_planes_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ?
'X-RAY DIFFRACTION' ? 2.540 5.285 982 ? r_mcbond_it ? ?
'X-RAY DIFFRACTION' ? 2.537 5.283 981 ? r_mcbond_other ? ?
'X-RAY DIFFRACTION' ? 4.304 7.922 1224 ? r_mcangle_it ? ?
'X-RAY DIFFRACTION' ? 4.302 7.924 1225 ? r_mcangle_other ? ?
'X-RAY DIFFRACTION' ? 2.616 5.790 1050 ? r_scbond_it ? ?
'X-RAY DIFFRACTION' ? 2.616 5.790 1050 ? r_scbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ?
'X-RAY DIFFRACTION' ? 4.347 8.526 1531 ? r_scangle_other ? ?
'X-RAY DIFFRACTION' ? 8.018 44.423 2286 ? r_long_range_B_refined ? ?
'X-RAY DIFFRACTION' ? 8.016 44.438 2287 ? r_long_range_B_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 3.00
_refine_ls_shell.d_res_low 3.08
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 18
_refine_ls_shell.number_reflns_R_work 308
_refine_ls_shell.percent_reflns_obs 97.31
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.3650
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.R_factor_R_work 0.1870
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 5XG4
_struct.title 'Crystal structure of uPA in complex with quercetin'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 5XG4
_struct_keywords.text 'Serine proteases, uPA, pepetide inhibitors, HYDROLASE-HYDROLASE INHIBITOR complex'
_struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code UROK_HUMAN
_struct_ref.pdbx_db_accession P00749
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN
LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK
LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW
IRSHTK
;
_struct_ref.pdbx_align_begin 179
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 5XG4
_struct_ref_seq.pdbx_strand_id U
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 246
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P00749
_struct_ref_seq.db_align_beg 179
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 424
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 16
_struct_ref_seq.pdbx_auth_seq_align_end 243
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 5XG4 ALA U 121 ? UNP P00749 CYS 299 conflict 122 1
1 5XG4 GLN U 144 ? UNP P00749 ASN 322 conflict 145 2
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 510 ?
1 MORE -6 ?
1 'SSA (A^2)' 11150 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration'
_pdbx_struct_assembly_auth_evidence.details ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 THR A 8 ? GLN A 12 ? THR U 23 GLN U 27 5 ? 5
HELX_P HELX_P2 AA2 ALA A 44 ? PHE A 48 ? ALA U 55 PHE U 59 5 ? 5
HELX_P HELX_P3 AA3 LYS A 53 ? GLU A 55 A LYS U 61 GLU U 62 5 ? 3
HELX_P HELX_P4 AA4 SER A 163 ? GLN A 168 ? SER U 164 GLN U 169 1 ? 6
HELX_P HELX_P5 AA5 TYR A 173 ? VAL A 177 ? TYR U 172 VAL U 176 5 ? 5
HELX_P HELX_P6 AA6 PHE A 237 ? LYS A 246 ? PHE U 234 LYS U 243 1 ? 10
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 47 SG ? ? U CYS 42 U CYS 58 1_555 ? ? ? ? ? ? ? 2.033 ? ?
disulf2 disulf ? ? A CYS 39 SG ? ? ? 1_555 A CYS 110 SG ? ? U CYS 50 U CYS 111 1_555 ? ? ? ? ? ? ? 2.029 ? ?
disulf3 disulf ? ? A CYS 135 SG ? ? ? 1_555 A CYS 204 SG ? ? U CYS 136 U CYS 201 1_555 ? ? ? ? ? ? ? 2.015 ? ?
disulf4 disulf ? ? A CYS 167 SG ? ? ? 1_555 A CYS 183 SG ? ? U CYS 168 U CYS 182 1_555 ? ? ? ? ? ? ? 2.032 ? ?
#
_struct_conn_type.id disulf
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 CYS A 31 ? CYS A 47 ? CYS U 42 ? 1_555 CYS U 58 ? 1_555 SG SG . . . None 'Disulfide bridge'
2 CYS A 39 ? CYS A 110 ? CYS U 50 ? 1_555 CYS U 111 ? 1_555 SG SG . . . None 'Disulfide bridge'
3 CYS A 135 ? CYS A 204 ? CYS U 136 ? 1_555 CYS U 201 ? 1_555 SG SG . . . None 'Disulfide bridge'
4 CYS A 167 ? CYS A 183 ? CYS U 168 ? 1_555 CYS U 182 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id LYS
_struct_mon_prot_cis.label_seq_id 225
_struct_mon_prot_cis.label_asym_id A
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id LYS
_struct_mon_prot_cis.auth_seq_id 223
_struct_mon_prot_cis.auth_asym_id U
_struct_mon_prot_cis.pdbx_label_comp_id_2 ASP
_struct_mon_prot_cis.pdbx_label_seq_id_2 226
_struct_mon_prot_cis.pdbx_label_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 A
_struct_mon_prot_cis.pdbx_auth_comp_id_2 ASP
_struct_mon_prot_cis.pdbx_auth_seq_id_2 223
_struct_mon_prot_cis.pdbx_auth_asym_id_2 U
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle -11.16
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA1 ? 8 ?
AA2 ? 7 ?
AA3 ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA1 2 3 ? anti-parallel
AA1 3 4 ? anti-parallel
AA1 4 5 ? anti-parallel
AA1 5 6 ? anti-parallel
AA1 6 7 ? anti-parallel
AA1 7 8 ? anti-parallel
AA2 1 2 ? anti-parallel
AA2 2 3 ? anti-parallel
AA2 3 4 ? anti-parallel
AA2 4 5 ? anti-parallel
AA2 5 6 ? anti-parallel
AA2 6 7 ? anti-parallel
AA3 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 GLU A 5 ? PHE A 6 ? GLU U 20 PHE U 21
AA1 2 LYS A 155 ? ILE A 162 ? LYS U 156 ILE U 163
AA1 3 CYS A 183 ? ALA A 185 ? CYS U 182 ALA U 184
AA1 4 GLY A 229 ? ARG A 233 ? GLY U 226 ARG U 230
AA1 5 ARG A 209 ? TRP A 218 ? ARG U 206 TRP U 215
AA1 6 PRO A 201 ? LEU A 206 ? PRO U 198 LEU U 203
AA1 7 SER A 134 ? GLY A 139 ? SER U 135 GLY U 140
AA1 8 LYS A 155 ? ILE A 162 ? LYS U 156 ILE U 163
AA2 1 PHE A 15 ? ARG A 21 ? PHE U 30 ARG U 36
AA2 2 VAL A 27 ? SER A 37 ? VAL U 38 SER U 48
AA2 3 TRP A 40 ? SER A 43 ? TRP U 51 SER U 54
AA2 4 ALA A 99 ? ARG A 104 ? ALA U 104 ARG U 109
AA2 5 MET A 74 ? ILE A 82 ? MET U 81 ILE U 89
AA2 6 TYR A 57 ? LEU A 61 ? TYR U 64 LEU U 68
AA2 7 PHE A 15 ? ARG A 21 ? PHE U 30 ARG U 36
AA3 1 SER A 88 ? ALA A 89 ? SER U 95 ALA U 96
AA3 2 HIS A 94 ? HIS A 95 ? HIS U 99 HIS U 100
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N GLU A 5 ? N GLU U 20 O MET A 156 ? O MET U 157
AA1 2 3 N ILE A 162 ? N ILE U 163 O CYS A 183 ? O CYS U 182
AA1 3 4 N ALA A 184 ? N ALA U 183 O GLY A 229 ? O GLY U 226
AA1 4 5 O THR A 232 ? O THR U 229 N ILE A 215 ? N ILE U 212
AA1 5 6 O ARG A 209 ? O ARG U 206 N LEU A 206 ? N LEU U 203
AA1 6 7 O VAL A 203 ? O VAL U 200 N GLU A 136 ? N GLU U 137
AA1 7 8 N GLY A 139 ? N GLY U 140 O LYS A 155 ? O LYS U 156
AA2 1 2 N ILE A 18 ? N ILE U 33 O VAL A 30 ? O VAL U 41
AA2 2 3 N SER A 34 ? N SER U 45 O ILE A 42 ? O ILE U 53
AA2 3 4 N VAL A 41 ? N VAL U 52 O LEU A 101 ? O LEU U 106
AA2 4 5 O LEU A 100 ? O LEU U 105 N ILE A 82 ? N ILE U 89
AA2 5 6 O PHE A 76 ? O PHE U 83 N VAL A 59 ? N VAL U 66
AA2 6 7 O ILE A 58 ? O ILE U 65 N TYR A 19 ? N TYR U 34
AA3 1 2 N SER A 88 ? N SER U 95 O HIS A 95 ? O HIS U 100
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software U QUE 301 ? 12 'binding site for residue QUE U 301'
AC2 Software U PG6 302 ? 7 'binding site for residue PG6 U 302'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 12 HIS A 46 ? HIS U 57 . ? 1_555 ?
2 AC1 12 HIS A 94 ? HIS U 99 . ? 1_555 ?
3 AC1 12 ASP A 192 ? ASP U 189 . ? 1_555 ?
4 AC1 12 SER A 193 ? SER U 190 . ? 1_555 ?
5 AC1 12 GLN A 195 ? GLN U 192 . ? 1_555 ?
6 AC1 12 SER A 198 ? SER U 195 . ? 1_555 ?
7 AC1 12 VAL A 216 ? VAL U 213 . ? 1_555 ?
8 AC1 12 SER A 217 ? SER U 214 . ? 1_555 ?
9 AC1 12 TRP A 218 ? TRP U 215 . ? 1_555 ?
10 AC1 12 GLY A 219 ? GLY U 216 . ? 1_555 ?
11 AC1 12 GLY A 221 ? GLY U 219 . ? 1_555 ?
12 AC1 12 PG6 C . ? PG6 U 302 . ? 1_555 ?
13 AC2 7 ARG A 20 ? ARG U 35 . ? 1_555 ?
14 AC2 7 HIS A 46 ? HIS U 57 . ? 1_555 ?
15 AC2 7 GLN A 195 ? GLN U 192 . ? 1_555 ?
16 AC2 7 GLY A 196 ? GLY U 193 . ? 1_555 ?
17 AC2 7 ASP A 197 ? ASP U 194 . ? 1_555 ?
18 AC2 7 SER A 198 ? SER U 195 . ? 1_555 ?
19 AC2 7 QUE B . ? QUE U 301 . ? 1_555 ?
#
_pdbx_entry_details.entry_id 5XG4
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 SG U CYS 191 ? ? SG U CYS 220 ? ? 1.48
2 1 O U SER 214 ? ? O27 U QUE 301 ? ? 1.98
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 NE U ARG 35 ? ? CZ U ARG 35 ? ? NH2 U ARG 35 ? ? 123.52 120.30 3.22 0.50 N
2 1 CA U CYS 191 ? ? CB U CYS 191 ? ? SG U CYS 191 ? ? 137.91 114.20 23.71 1.10 N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 GLN U 27 ? ? -143.95 51.35
2 1 SER U 54 ? ? -128.71 -160.21
3 1 ASP U 93 ? ? -83.30 35.26
4 1 ASP U 97 ? ? -110.99 -140.70
5 1 LEU U 97 B ? -125.81 -55.47
6 1 TYR U 171 ? ? -96.16 -109.79
7 1 SER U 214 ? ? -124.05 -62.79
8 1 ASP U 223 A ? -118.78 70.59
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
GLN N N N N 88
GLN CA C N S 89
GLN C C N N 90
GLN O O N N 91
GLN CB C N N 92
GLN CG C N N 93
GLN CD C N N 94
GLN OE1 O N N 95
GLN NE2 N N N 96
GLN OXT O N N 97
GLN H H N N 98
GLN H2 H N N 99
GLN HA H N N 100
GLN HB2 H N N 101
GLN HB3 H N N 102
GLN HG2 H N N 103
GLN HG3 H N N 104
GLN HE21 H N N 105
GLN HE22 H N N 106
GLN HXT H N N 107
GLU N N N N 108
GLU CA C N S 109
GLU C C N N 110
GLU O O N N 111
GLU CB C N N 112
GLU CG C N N 113
GLU CD C N N 114
GLU OE1 O N N 115
GLU OE2 O N N 116
GLU OXT O N N 117
GLU H H N N 118
GLU H2 H N N 119
GLU HA H N N 120
GLU HB2 H N N 121
GLU HB3 H N N 122
GLU HG2 H N N 123
GLU HG3 H N N 124
GLU HE2 H N N 125
GLU HXT H N N 126
GLY N N N N 127
GLY CA C N N 128
GLY C C N N 129
GLY O O N N 130
GLY OXT O N N 131
GLY H H N N 132
GLY H2 H N N 133
GLY HA2 H N N 134
GLY HA3 H N N 135
GLY HXT H N N 136
HIS N N N N 137
HIS CA C N S 138
HIS C C N N 139
HIS O O N N 140
HIS CB C N N 141
HIS CG C Y N 142
HIS ND1 N Y N 143
HIS CD2 C Y N 144
HIS CE1 C Y N 145
HIS NE2 N Y N 146
HIS OXT O N N 147
HIS H H N N 148
HIS H2 H N N 149
HIS HA H N N 150
HIS HB2 H N N 151
HIS HB3 H N N 152
HIS HD1 H N N 153
HIS HD2 H N N 154
HIS HE1 H N N 155
HIS HE2 H N N 156
HIS HXT H N N 157
HOH O O N N 158
HOH H1 H N N 159
HOH H2 H N N 160
ILE N N N N 161
ILE CA C N S 162
ILE C C N N 163
ILE O O N N 164
ILE CB C N S 165
ILE CG1 C N N 166
ILE CG2 C N N 167
ILE CD1 C N N 168
ILE OXT O N N 169
ILE H H N N 170
ILE H2 H N N 171
ILE HA H N N 172
ILE HB H N N 173
ILE HG12 H N N 174
ILE HG13 H N N 175
ILE HG21 H N N 176
ILE HG22 H N N 177
ILE HG23 H N N 178
ILE HD11 H N N 179
ILE HD12 H N N 180
ILE HD13 H N N 181
ILE HXT H N N 182
LEU N N N N 183
LEU CA C N S 184
LEU C C N N 185
LEU O O N N 186
LEU CB C N N 187
LEU CG C N N 188
LEU CD1 C N N 189
LEU CD2 C N N 190
LEU OXT O N N 191
LEU H H N N 192
LEU H2 H N N 193
LEU HA H N N 194
LEU HB2 H N N 195
LEU HB3 H N N 196
LEU HG H N N 197
LEU HD11 H N N 198
LEU HD12 H N N 199
LEU HD13 H N N 200
LEU HD21 H N N 201
LEU HD22 H N N 202
LEU HD23 H N N 203
LEU HXT H N N 204
LYS N N N N 205
LYS CA C N S 206
LYS C C N N 207
LYS O O N N 208
LYS CB C N N 209
LYS CG C N N 210
LYS CD C N N 211
LYS CE C N N 212
LYS NZ N N N 213
LYS OXT O N N 214
LYS H H N N 215
LYS H2 H N N 216
LYS HA H N N 217
LYS HB2 H N N 218
LYS HB3 H N N 219
LYS HG2 H N N 220
LYS HG3 H N N 221
LYS HD2 H N N 222
LYS HD3 H N N 223
LYS HE2 H N N 224
LYS HE3 H N N 225
LYS HZ1 H N N 226
LYS HZ2 H N N 227
LYS HZ3 H N N 228
LYS HXT H N N 229
MET N N N N 230
MET CA C N S 231
MET C C N N 232
MET O O N N 233
MET CB C N N 234
MET CG C N N 235
MET SD S N N 236
MET CE C N N 237
MET OXT O N N 238
MET H H N N 239
MET H2 H N N 240
MET HA H N N 241
MET HB2 H N N 242
MET HB3 H N N 243
MET HG2 H N N 244
MET HG3 H N N 245
MET HE1 H N N 246
MET HE2 H N N 247
MET HE3 H N N 248
MET HXT H N N 249
PG6 C1 C N N 250
PG6 O1 O N N 251
PG6 C2 C N N 252
PG6 C3 C N N 253
PG6 O2 O N N 254
PG6 C4 C N N 255
PG6 C5 C N N 256
PG6 O3 O N N 257
PG6 C6 C N N 258
PG6 C7 C N N 259
PG6 O4 O N N 260
PG6 C8 C N N 261
PG6 C9 C N N 262
PG6 O5 O N N 263
PG6 C10 C N N 264
PG6 C11 C N N 265
PG6 O6 O N N 266
PG6 C12 C N N 267
PG6 H11 H N N 268
PG6 H12 H N N 269
PG6 H13 H N N 270
PG6 H21 H N N 271
PG6 H22 H N N 272
PG6 H31 H N N 273
PG6 H32 H N N 274
PG6 H41 H N N 275
PG6 H42 H N N 276
PG6 H51 H N N 277
PG6 H52 H N N 278
PG6 H61 H N N 279
PG6 H62 H N N 280
PG6 H71 H N N 281
PG6 H72 H N N 282
PG6 H81 H N N 283
PG6 H82 H N N 284
PG6 H91 H N N 285
PG6 H92 H N N 286
PG6 H101 H N N 287
PG6 H102 H N N 288
PG6 H111 H N N 289
PG6 H112 H N N 290
PG6 H121 H N N 291
PG6 H122 H N N 292
PG6 H123 H N N 293
PHE N N N N 294
PHE CA C N S 295
PHE C C N N 296
PHE O O N N 297
PHE CB C N N 298
PHE CG C Y N 299
PHE CD1 C Y N 300
PHE CD2 C Y N 301
PHE CE1 C Y N 302
PHE CE2 C Y N 303
PHE CZ C Y N 304
PHE OXT O N N 305
PHE H H N N 306
PHE H2 H N N 307
PHE HA H N N 308
PHE HB2 H N N 309
PHE HB3 H N N 310
PHE HD1 H N N 311
PHE HD2 H N N 312
PHE HE1 H N N 313
PHE HE2 H N N 314
PHE HZ H N N 315
PHE HXT H N N 316
PRO N N N N 317
PRO CA C N S 318
PRO C C N N 319
PRO O O N N 320
PRO CB C N N 321
PRO CG C N N 322
PRO CD C N N 323
PRO OXT O N N 324
PRO H H N N 325
PRO HA H N N 326
PRO HB2 H N N 327
PRO HB3 H N N 328
PRO HG2 H N N 329
PRO HG3 H N N 330
PRO HD2 H N N 331
PRO HD3 H N N 332
PRO HXT H N N 333
QUE C1 C Y N 334
QUE C2 C Y N 335
QUE C3 C Y N 336
QUE C4 C Y N 337
QUE C5 C Y N 338
QUE C6 C Y N 339
QUE C9 C Y N 340
QUE C10 C Y N 341
QUE C11 C Y N 342
QUE C14 C Y N 343
QUE C15 C Y N 344
QUE C16 C Y N 345
QUE C17 C Y N 346
QUE C18 C Y N 347
QUE C19 C Y N 348
QUE O12 O Y N 349
QUE O13 O N N 350
QUE O23 O N N 351
QUE O24 O N N 352
QUE O27 O N N 353
QUE O29 O N N 354
QUE O30 O N N 355
QUE H1 H N N 356
QUE H5 H N N 357
QUE H15 H N N 358
QUE H16 H N N 359
QUE H19 H N N 360
QUE HO3 H N N 361
QUE HO4 H N N 362
QUE HO7 H N N 363
QUE HO9 H N N 364
QUE HO0 H N N 365
SER N N N N 366
SER CA C N S 367
SER C C N N 368
SER O O N N 369
SER CB C N N 370
SER OG O N N 371
SER OXT O N N 372
SER H H N N 373
SER H2 H N N 374
SER HA H N N 375
SER HB2 H N N 376
SER HB3 H N N 377
SER HG H N N 378
SER HXT H N N 379
THR N N N N 380
THR CA C N S 381
THR C C N N 382
THR O O N N 383
THR CB C N R 384
THR OG1 O N N 385
THR CG2 C N N 386
THR OXT O N N 387
THR H H N N 388
THR H2 H N N 389
THR HA H N N 390
THR HB H N N 391
THR HG1 H N N 392
THR HG21 H N N 393
THR HG22 H N N 394
THR HG23 H N N 395
THR HXT H N N 396
TRP N N N N 397
TRP CA C N S 398
TRP C C N N 399
TRP O O N N 400
TRP CB C N N 401
TRP CG C Y N 402
TRP CD1 C Y N 403
TRP CD2 C Y N 404
TRP NE1 N Y N 405
TRP CE2 C Y N 406
TRP CE3 C Y N 407
TRP CZ2 C Y N 408
TRP CZ3 C Y N 409
TRP CH2 C Y N 410
TRP OXT O N N 411
TRP H H N N 412
TRP H2 H N N 413
TRP HA H N N 414
TRP HB2 H N N 415
TRP HB3 H N N 416
TRP HD1 H N N 417
TRP HE1 H N N 418
TRP HE3 H N N 419
TRP HZ2 H N N 420
TRP HZ3 H N N 421
TRP HH2 H N N 422
TRP HXT H N N 423
TYR N N N N 424
TYR CA C N S 425
TYR C C N N 426
TYR O O N N 427
TYR CB C N N 428
TYR CG C Y N 429
TYR CD1 C Y N 430
TYR CD2 C Y N 431
TYR CE1 C Y N 432
TYR CE2 C Y N 433
TYR CZ C Y N 434
TYR OH O N N 435
TYR OXT O N N 436
TYR H H N N 437
TYR H2 H N N 438
TYR HA H N N 439
TYR HB2 H N N 440
TYR HB3 H N N 441
TYR HD1 H N N 442
TYR HD2 H N N 443
TYR HE1 H N N 444
TYR HE2 H N N 445
TYR HH H N N 446
TYR HXT H N N 447
VAL N N N N 448
VAL CA C N S 449
VAL C C N N 450
VAL O O N N 451
VAL CB C N N 452
VAL CG1 C N N 453
VAL CG2 C N N 454
VAL OXT O N N 455
VAL H H N N 456
VAL H2 H N N 457
VAL HA H N N 458
VAL HB H N N 459
VAL HG11 H N N 460
VAL HG12 H N N 461
VAL HG13 H N N 462
VAL HG21 H N N 463
VAL HG22 H N N 464
VAL HG23 H N N 465
VAL HXT H N N 466
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
GLN N CA sing N N 83
GLN N H sing N N 84
GLN N H2 sing N N 85
GLN CA C sing N N 86
GLN CA CB sing N N 87
GLN CA HA sing N N 88
GLN C O doub N N 89
GLN C OXT sing N N 90
GLN CB CG sing N N 91
GLN CB HB2 sing N N 92
GLN CB HB3 sing N N 93
GLN CG CD sing N N 94
GLN CG HG2 sing N N 95
GLN CG HG3 sing N N 96
GLN CD OE1 doub N N 97
GLN CD NE2 sing N N 98
GLN NE2 HE21 sing N N 99
GLN NE2 HE22 sing N N 100
GLN OXT HXT sing N N 101
GLU N CA sing N N 102
GLU N H sing N N 103
GLU N H2 sing N N 104
GLU CA C sing N N 105
GLU CA CB sing N N 106
GLU CA HA sing N N 107
GLU C O doub N N 108
GLU C OXT sing N N 109
GLU CB CG sing N N 110
GLU CB HB2 sing N N 111
GLU CB HB3 sing N N 112
GLU CG CD sing N N 113
GLU CG HG2 sing N N 114
GLU CG HG3 sing N N 115
GLU CD OE1 doub N N 116
GLU CD OE2 sing N N 117
GLU OE2 HE2 sing N N 118
GLU OXT HXT sing N N 119
GLY N CA sing N N 120
GLY N H sing N N 121
GLY N H2 sing N N 122
GLY CA C sing N N 123
GLY CA HA2 sing N N 124
GLY CA HA3 sing N N 125
GLY C O doub N N 126
GLY C OXT sing N N 127
GLY OXT HXT sing N N 128
HIS N CA sing N N 129
HIS N H sing N N 130
HIS N H2 sing N N 131
HIS CA C sing N N 132
HIS CA CB sing N N 133
HIS CA HA sing N N 134
HIS C O doub N N 135
HIS C OXT sing N N 136
HIS CB CG sing N N 137
HIS CB HB2 sing N N 138
HIS CB HB3 sing N N 139
HIS CG ND1 sing Y N 140
HIS CG CD2 doub Y N 141
HIS ND1 CE1 doub Y N 142
HIS ND1 HD1 sing N N 143
HIS CD2 NE2 sing Y N 144
HIS CD2 HD2 sing N N 145
HIS CE1 NE2 sing Y N 146
HIS CE1 HE1 sing N N 147
HIS NE2 HE2 sing N N 148
HIS OXT HXT sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
ILE N CA sing N N 152
ILE N H sing N N 153
ILE N H2 sing N N 154
ILE CA C sing N N 155
ILE CA CB sing N N 156
ILE CA HA sing N N 157
ILE C O doub N N 158
ILE C OXT sing N N 159
ILE CB CG1 sing N N 160
ILE CB CG2 sing N N 161
ILE CB HB sing N N 162
ILE CG1 CD1 sing N N 163
ILE CG1 HG12 sing N N 164
ILE CG1 HG13 sing N N 165
ILE CG2 HG21 sing N N 166
ILE CG2 HG22 sing N N 167
ILE CG2 HG23 sing N N 168
ILE CD1 HD11 sing N N 169
ILE CD1 HD12 sing N N 170
ILE CD1 HD13 sing N N 171
ILE OXT HXT sing N N 172
LEU N CA sing N N 173
LEU N H sing N N 174
LEU N H2 sing N N 175
LEU CA C sing N N 176
LEU CA CB sing N N 177
LEU CA HA sing N N 178
LEU C O doub N N 179
LEU C OXT sing N N 180
LEU CB CG sing N N 181
LEU CB HB2 sing N N 182
LEU CB HB3 sing N N 183
LEU CG CD1 sing N N 184
LEU CG CD2 sing N N 185
LEU CG HG sing N N 186
LEU CD1 HD11 sing N N 187
LEU CD1 HD12 sing N N 188
LEU CD1 HD13 sing N N 189
LEU CD2 HD21 sing N N 190
LEU CD2 HD22 sing N N 191
LEU CD2 HD23 sing N N 192
LEU OXT HXT sing N N 193
LYS N CA sing N N 194
LYS N H sing N N 195
LYS N H2 sing N N 196
LYS CA C sing N N 197
LYS CA CB sing N N 198
LYS CA HA sing N N 199
LYS C O doub N N 200
LYS C OXT sing N N 201
LYS CB CG sing N N 202
LYS CB HB2 sing N N 203
LYS CB HB3 sing N N 204
LYS CG CD sing N N 205
LYS CG HG2 sing N N 206
LYS CG HG3 sing N N 207
LYS CD CE sing N N 208
LYS CD HD2 sing N N 209
LYS CD HD3 sing N N 210
LYS CE NZ sing N N 211
LYS CE HE2 sing N N 212
LYS CE HE3 sing N N 213
LYS NZ HZ1 sing N N 214
LYS NZ HZ2 sing N N 215
LYS NZ HZ3 sing N N 216
LYS OXT HXT sing N N 217
MET N CA sing N N 218
MET N H sing N N 219
MET N H2 sing N N 220
MET CA C sing N N 221
MET CA CB sing N N 222
MET CA HA sing N N 223
MET C O doub N N 224
MET C OXT sing N N 225
MET CB CG sing N N 226
MET CB HB2 sing N N 227
MET CB HB3 sing N N 228
MET CG SD sing N N 229
MET CG HG2 sing N N 230
MET CG HG3 sing N N 231
MET SD CE sing N N 232
MET CE HE1 sing N N 233
MET CE HE2 sing N N 234
MET CE HE3 sing N N 235
MET OXT HXT sing N N 236
PG6 C1 O1 sing N N 237
PG6 C1 H11 sing N N 238
PG6 C1 H12 sing N N 239
PG6 C1 H13 sing N N 240
PG6 O1 C2 sing N N 241
PG6 C2 C3 sing N N 242
PG6 C2 H21 sing N N 243
PG6 C2 H22 sing N N 244
PG6 C3 O2 sing N N 245
PG6 C3 H31 sing N N 246
PG6 C3 H32 sing N N 247
PG6 O2 C4 sing N N 248
PG6 C4 C5 sing N N 249
PG6 C4 H41 sing N N 250
PG6 C4 H42 sing N N 251
PG6 C5 O3 sing N N 252
PG6 C5 H51 sing N N 253
PG6 C5 H52 sing N N 254
PG6 O3 C6 sing N N 255
PG6 C6 C7 sing N N 256
PG6 C6 H61 sing N N 257
PG6 C6 H62 sing N N 258
PG6 C7 O4 sing N N 259
PG6 C7 H71 sing N N 260
PG6 C7 H72 sing N N 261
PG6 O4 C8 sing N N 262
PG6 C8 C9 sing N N 263
PG6 C8 H81 sing N N 264
PG6 C8 H82 sing N N 265
PG6 C9 O5 sing N N 266
PG6 C9 H91 sing N N 267
PG6 C9 H92 sing N N 268
PG6 O5 C10 sing N N 269
PG6 C10 C11 sing N N 270
PG6 C10 H101 sing N N 271
PG6 C10 H102 sing N N 272
PG6 C11 O6 sing N N 273
PG6 C11 H111 sing N N 274
PG6 C11 H112 sing N N 275
PG6 O6 C12 sing N N 276
PG6 C12 H121 sing N N 277
PG6 C12 H122 sing N N 278
PG6 C12 H123 sing N N 279
PHE N CA sing N N 280
PHE N H sing N N 281
PHE N H2 sing N N 282
PHE CA C sing N N 283
PHE CA CB sing N N 284
PHE CA HA sing N N 285
PHE C O doub N N 286
PHE C OXT sing N N 287
PHE CB CG sing N N 288
PHE CB HB2 sing N N 289
PHE CB HB3 sing N N 290
PHE CG CD1 doub Y N 291
PHE CG CD2 sing Y N 292
PHE CD1 CE1 sing Y N 293
PHE CD1 HD1 sing N N 294
PHE CD2 CE2 doub Y N 295
PHE CD2 HD2 sing N N 296
PHE CE1 CZ doub Y N 297
PHE CE1 HE1 sing N N 298
PHE CE2 CZ sing Y N 299
PHE CE2 HE2 sing N N 300
PHE CZ HZ sing N N 301
PHE OXT HXT sing N N 302
PRO N CA sing N N 303
PRO N CD sing N N 304
PRO N H sing N N 305
PRO CA C sing N N 306
PRO CA CB sing N N 307
PRO CA HA sing N N 308
PRO C O doub N N 309
PRO C OXT sing N N 310
PRO CB CG sing N N 311
PRO CB HB2 sing N N 312
PRO CB HB3 sing N N 313
PRO CG CD sing N N 314
PRO CG HG2 sing N N 315
PRO CG HG3 sing N N 316
PRO CD HD2 sing N N 317
PRO CD HD3 sing N N 318
PRO OXT HXT sing N N 319
QUE C1 C2 doub Y N 320
QUE C1 C6 sing Y N 321
QUE C1 H1 sing N N 322
QUE C2 C3 sing Y N 323
QUE C2 O30 sing N N 324
QUE C3 C4 doub Y N 325
QUE C3 C9 sing Y N 326
QUE C4 C5 sing Y N 327
QUE C4 O12 sing Y N 328
QUE C5 C6 doub Y N 329
QUE C5 H5 sing N N 330
QUE C6 O29 sing N N 331
QUE C9 C10 sing Y N 332
QUE C9 O13 doub N N 333
QUE C10 C11 doub Y N 334
QUE C10 O27 sing N N 335
QUE C11 C14 sing Y N 336
QUE C11 O12 sing Y N 337
QUE C14 C15 doub Y N 338
QUE C14 C19 sing Y N 339
QUE C15 C16 sing Y N 340
QUE C15 H15 sing N N 341
QUE C16 C17 doub Y N 342
QUE C16 H16 sing N N 343
QUE C17 C18 sing Y N 344
QUE C17 O24 sing N N 345
QUE C18 C19 doub Y N 346
QUE C18 O23 sing N N 347
QUE C19 H19 sing N N 348
QUE O23 HO3 sing N N 349
QUE O24 HO4 sing N N 350
QUE O27 HO7 sing N N 351
QUE O29 HO9 sing N N 352
QUE O30 HO0 sing N N 353
SER N CA sing N N 354
SER N H sing N N 355
SER N H2 sing N N 356
SER CA C sing N N 357
SER CA CB sing N N 358
SER CA HA sing N N 359
SER C O doub N N 360
SER C OXT sing N N 361
SER CB OG sing N N 362
SER CB HB2 sing N N 363
SER CB HB3 sing N N 364
SER OG HG sing N N 365
SER OXT HXT sing N N 366
THR N CA sing N N 367
THR N H sing N N 368
THR N H2 sing N N 369
THR CA C sing N N 370
THR CA CB sing N N 371
THR CA HA sing N N 372
THR C O doub N N 373
THR C OXT sing N N 374
THR CB OG1 sing N N 375
THR CB CG2 sing N N 376
THR CB HB sing N N 377
THR OG1 HG1 sing N N 378
THR CG2 HG21 sing N N 379
THR CG2 HG22 sing N N 380
THR CG2 HG23 sing N N 381
THR OXT HXT sing N N 382
TRP N CA sing N N 383
TRP N H sing N N 384
TRP N H2 sing N N 385
TRP CA C sing N N 386
TRP CA CB sing N N 387
TRP CA HA sing N N 388
TRP C O doub N N 389
TRP C OXT sing N N 390
TRP CB CG sing N N 391
TRP CB HB2 sing N N 392
TRP CB HB3 sing N N 393
TRP CG CD1 doub Y N 394
TRP CG CD2 sing Y N 395
TRP CD1 NE1 sing Y N 396
TRP CD1 HD1 sing N N 397
TRP CD2 CE2 doub Y N 398
TRP CD2 CE3 sing Y N 399
TRP NE1 CE2 sing Y N 400
TRP NE1 HE1 sing N N 401
TRP CE2 CZ2 sing Y N 402
TRP CE3 CZ3 doub Y N 403
TRP CE3 HE3 sing N N 404
TRP CZ2 CH2 doub Y N 405
TRP CZ2 HZ2 sing N N 406
TRP CZ3 CH2 sing Y N 407
TRP CZ3 HZ3 sing N N 408
TRP CH2 HH2 sing N N 409
TRP OXT HXT sing N N 410
TYR N CA sing N N 411
TYR N H sing N N 412
TYR N H2 sing N N 413
TYR CA C sing N N 414
TYR CA CB sing N N 415
TYR CA HA sing N N 416
TYR C O doub N N 417
TYR C OXT sing N N 418
TYR CB CG sing N N 419
TYR CB HB2 sing N N 420
TYR CB HB3 sing N N 421
TYR CG CD1 doub Y N 422
TYR CG CD2 sing Y N 423
TYR CD1 CE1 sing Y N 424
TYR CD1 HD1 sing N N 425
TYR CD2 CE2 doub Y N 426
TYR CD2 HD2 sing N N 427
TYR CE1 CZ doub Y N 428
TYR CE1 HE1 sing N N 429
TYR CE2 CZ sing Y N 430
TYR CE2 HE2 sing N N 431
TYR CZ OH sing N N 432
TYR OH HH sing N N 433
TYR OXT HXT sing N N 434
VAL N CA sing N N 435
VAL N H sing N N 436
VAL N H2 sing N N 437
VAL CA C sing N N 438
VAL CA CB sing N N 439
VAL CA HA sing N N 440
VAL C O doub N N 441
VAL C OXT sing N N 442
VAL CB CG1 sing N N 443
VAL CB CG2 sing N N 444
VAL CB HB sing N N 445
VAL CG1 HG11 sing N N 446
VAL CG1 HG12 sing N N 447
VAL CG1 HG13 sing N N 448
VAL CG2 HG21 sing N N 449
VAL CG2 HG22 sing N N 450
VAL CG2 HG23 sing N N 451
VAL OXT HXT sing N N 452
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 4DVA
_pdbx_initial_refinement_model.details ?
#
_atom_sites.entry_id 5XG4
_atom_sites.fract_transf_matrix[1][1] 0.008335
_atom_sites.fract_transf_matrix[1][2] 0.004812
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.009625
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.023935
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_