HEADER HYDROLASE 26-APR-17 5XI8 TITLE STRUCTURE AND FUNCTION OF THE TPR DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-BARREL ASSEMBLY-ENHANCING PROTEASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 310-482; COMPND 5 EC: 3.4.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: BEPA, YFGC, B2494, JW2479; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI KRX; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1452720; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: KRX; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS MEMBRANE PROTEIN, TPR DOMAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.TANAKA,T.TSUKAZAKI REVDAT 3 13-DEC-17 5XI8 1 JRNL REVDAT 2 25-OCT-17 5XI8 1 JRNL REVDAT 1 18-OCT-17 5XI8 0 JRNL AUTH Y.DAIMON,C.IWAMA-MASUI,Y.TANAKA,T.SHIOTA,T.SUZUKI, JRNL AUTH 2 R.MIYAZAKI,H.SAKURADA,T.LITHGOW,N.DOHMAE,H.MORI,T.TSUKAZAKI, JRNL AUTH 3 S.I.NARITA,Y.AKIYAMA JRNL TITL THE TPR DOMAIN OF BEPA IS REQUIRED FOR PRODUCTIVE JRNL TITL 2 INTERACTION WITH SUBSTRATE PROTEINS AND THE BETA-BARREL JRNL TITL 3 ASSEMBLY MACHINERY COMPLEX. JRNL REF MOL. MICROBIOL. V. 106 760 2017 JRNL REFN ESSN 1365-2958 JRNL PMID 28960545 JRNL DOI 10.1111/MMI.13844 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11_2567 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 36176 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3629 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1300 - 5.0323 1.00 1254 145 0.1735 0.1533 REMARK 3 2 5.0323 - 3.9958 1.00 1249 140 0.1490 0.1644 REMARK 3 3 3.9958 - 3.4911 1.00 1245 139 0.1435 0.1723 REMARK 3 4 3.4911 - 3.1721 1.00 1262 141 0.1472 0.1767 REMARK 3 5 3.1721 - 2.9448 1.00 1253 140 0.1653 0.2346 REMARK 3 6 2.9448 - 2.7713 1.00 1270 136 0.1643 0.2284 REMARK 3 7 2.7713 - 2.6325 1.00 1214 141 0.1529 0.2067 REMARK 3 8 2.6325 - 2.5180 1.00 1262 139 0.1661 0.2174 REMARK 3 9 2.5180 - 2.4210 1.00 1260 141 0.1677 0.1767 REMARK 3 10 2.4210 - 2.3375 1.00 1247 138 0.1529 0.1973 REMARK 3 11 2.3375 - 2.2644 1.00 1252 137 0.1355 0.1740 REMARK 3 12 2.2644 - 2.1997 1.00 1239 138 0.1509 0.1852 REMARK 3 13 2.1997 - 2.1418 1.00 1266 142 0.1335 0.1704 REMARK 3 14 2.1418 - 2.0896 1.00 1261 138 0.1472 0.1516 REMARK 3 15 2.0896 - 2.0421 1.00 1259 142 0.1635 0.1896 REMARK 3 16 2.0421 - 1.9986 1.00 1227 135 0.1650 0.1912 REMARK 3 17 1.9986 - 1.9586 1.00 1276 144 0.1659 0.1890 REMARK 3 18 1.9586 - 1.9217 1.00 1225 134 0.1713 0.1908 REMARK 3 19 1.9217 - 1.8874 1.00 1232 139 0.2010 0.2391 REMARK 3 20 1.8874 - 1.8554 1.00 1287 143 0.1897 0.2359 REMARK 3 21 1.8554 - 1.8254 1.00 1247 140 0.1895 0.2335 REMARK 3 22 1.8254 - 1.7974 1.00 1248 137 0.1975 0.2503 REMARK 3 23 1.7974 - 1.7709 1.00 1232 137 0.2098 0.2844 REMARK 3 24 1.7709 - 1.7460 1.00 1265 145 0.2456 0.2855 REMARK 3 25 1.7460 - 1.7224 1.00 1264 137 0.2458 0.2738 REMARK 3 26 1.7224 - 1.7000 1.00 1251 141 0.3011 0.3061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1394 REMARK 3 ANGLE : 0.979 1886 REMARK 3 CHIRALITY : 0.042 203 REMARK 3 PLANARITY : 0.004 260 REMARK 3 DIHEDRAL : 5.902 1188 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1838 -17.3019 -7.8344 REMARK 3 T TENSOR REMARK 3 T11: 0.0992 T22: 0.1661 REMARK 3 T33: 0.0292 T12: -0.0413 REMARK 3 T13: 0.0340 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 0.0202 L22: 0.0121 REMARK 3 L33: 0.0198 L12: 0.0004 REMARK 3 L13: 0.0044 L23: -0.0147 REMARK 3 S TENSOR REMARK 3 S11: -0.1822 S12: -0.2260 S13: 0.2203 REMARK 3 S21: 0.0100 S22: -0.0816 S23: -0.0786 REMARK 3 S31: 0.1225 S32: -0.2377 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 339 THROUGH 368 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1674 -22.8127 -12.9983 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.1057 REMARK 3 T33: 0.0910 T12: 0.0133 REMARK 3 T13: 0.0022 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.0134 L22: 0.0024 REMARK 3 L33: -0.0004 L12: 0.0041 REMARK 3 L13: -0.0238 L23: 0.0039 REMARK 3 S TENSOR REMARK 3 S11: 0.0092 S12: 0.0802 S13: 0.0749 REMARK 3 S21: -0.0659 S22: -0.1207 S23: 0.0048 REMARK 3 S31: 0.0212 S32: -0.0415 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 369 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5352 -22.0124 -9.2667 REMARK 3 T TENSOR REMARK 3 T11: 0.1692 T22: -0.0616 REMARK 3 T33: 0.4184 T12: -0.0279 REMARK 3 T13: -0.0830 T23: 0.0834 REMARK 3 L TENSOR REMARK 3 L11: 0.0036 L22: 0.0017 REMARK 3 L33: 0.0038 L12: 0.0014 REMARK 3 L13: 0.0014 L23: 0.0024 REMARK 3 S TENSOR REMARK 3 S11: -0.0353 S12: 0.0099 S13: 0.0313 REMARK 3 S21: 0.0223 S22: -0.0219 S23: 0.0052 REMARK 3 S31: -0.0275 S32: 0.0154 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 425 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5832 -36.6959 -8.0354 REMARK 3 T TENSOR REMARK 3 T11: 0.1004 T22: 0.0545 REMARK 3 T33: 0.0738 T12: 0.0050 REMARK 3 T13: -0.0028 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.0198 L22: 0.0443 REMARK 3 L33: 0.0269 L12: 0.0237 REMARK 3 L13: 0.0111 L23: -0.0436 REMARK 3 S TENSOR REMARK 3 S11: -0.0142 S12: 0.0230 S13: -0.0083 REMARK 3 S21: 0.0252 S22: -0.0260 S23: -0.0515 REMARK 3 S31: -0.0210 S32: -0.0126 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 426 THROUGH 461 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8140 -51.5843 -0.0645 REMARK 3 T TENSOR REMARK 3 T11: 0.0551 T22: 0.0395 REMARK 3 T33: 0.0541 T12: -0.0011 REMARK 3 T13: -0.0092 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: -0.0057 L22: 0.0037 REMARK 3 L33: 0.0138 L12: 0.0021 REMARK 3 L13: -0.0020 L23: 0.0133 REMARK 3 S TENSOR REMARK 3 S11: 0.0155 S12: -0.0335 S13: -0.0494 REMARK 3 S21: -0.0243 S22: -0.0458 S23: 0.0015 REMARK 3 S31: -0.0931 S32: 0.0354 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 462 THROUGH 482 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4144 -50.1030 8.3690 REMARK 3 T TENSOR REMARK 3 T11: 0.0383 T22: 0.0797 REMARK 3 T33: 0.1011 T12: -0.0048 REMARK 3 T13: -0.0361 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.0138 L22: 0.0245 REMARK 3 L33: 0.0027 L12: -0.0189 REMARK 3 L13: -0.0060 L23: 0.0011 REMARK 3 S TENSOR REMARK 3 S11: -0.0708 S12: -0.1216 S13: -0.0172 REMARK 3 S21: -0.1118 S22: 0.1765 S23: -0.0808 REMARK 3 S31: -0.1340 S32: -0.0246 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ENTRY CONTAINS FRIEDEL PAIRS IN REMARK 3 I_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 5XI8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-APR-17. REMARK 100 THE DEPOSITION ID IS D_1300003591. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787, 0.9794, 0.9900 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36176 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 38.10 REMARK 200 R MERGE (I) : 0.27200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.70 REMARK 200 R MERGE FOR SHELL (I) : 1.00100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG 4000, AMMONIUM ACETATE, REMARK 280 KH2PO4, 2% PEG 8000, PH 5.9, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 51.98150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 30.01153 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 27.16367 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 51.98150 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 30.01153 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 27.16367 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 51.98150 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 30.01153 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 27.16367 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 51.98150 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 30.01153 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 27.16367 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 51.98150 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 30.01153 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 27.16367 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 51.98150 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 30.01153 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.16367 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 60.02307 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 54.32733 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 60.02307 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 54.32733 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 60.02307 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 54.32733 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 60.02307 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 54.32733 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 60.02307 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 54.32733 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 60.02307 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 54.32733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 507 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 550 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 603 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 641 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 648 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 659 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 663 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 670 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 373 O HOH A 501 2.10 REMARK 500 O HOH A 529 O HOH A 638 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 370 O GLN A 473 15544 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 370 CG ARG A 370 CD -0.165 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 370 CD - NE - CZ ANGL. DEV. = -13.9 DEGREES REMARK 500 ARG A 370 NE - CZ - NH1 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG A 370 NE - CZ - NH2 ANGL. DEV. = 5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 358 57.57 -117.14 REMARK 500 REMARK 500 REMARK: NULL DBREF 5XI8 A 310 482 UNP P66948 BEPA_ECOLI 310 482 SEQADV 5XI8 GLY A 308 UNP P66948 EXPRESSION TAG SEQADV 5XI8 SER A 309 UNP P66948 EXPRESSION TAG SEQADV 5XI8 MSE A 450 UNP P66948 LEU 450 ENGINEERED MUTATION SEQRES 1 A 175 GLY SER ALA ALA GLN TYR GLY ARG ALA LEU GLN ALA MSE SEQRES 2 A 175 GLU ALA ASN LYS TYR ASP GLU ALA ARG LYS THR LEU GLN SEQRES 3 A 175 PRO LEU LEU ALA ALA GLU PRO GLY ASN ALA TRP TYR LEU SEQRES 4 A 175 ASP LEU ALA THR ASP ILE ASP LEU GLY GLN ASN LYS ALA SEQRES 5 A 175 ASN GLU ALA ILE ASN ARG LEU LYS ASN ALA ARG ASP LEU SEQRES 6 A 175 ARG THR ASN PRO VAL LEU GLN LEU ASN LEU ALA ASN ALA SEQRES 7 A 175 TYR LEU GLN GLY GLY GLN PRO GLN GLU ALA ALA ASN ILE SEQRES 8 A 175 LEU ASN ARG TYR THR PHE ASN ASN LYS ASP ASP SER ASN SEQRES 9 A 175 GLY TRP ASP LEU LEU ALA GLN ALA GLU ALA ALA LEU ASN SEQRES 10 A 175 ASN ARG ASP GLN GLU LEU ALA ALA ARG ALA GLU GLY TYR SEQRES 11 A 175 ALA LEU ALA GLY ARG LEU ASP GLN ALA ILE SER LEU MSE SEQRES 12 A 175 SER SER ALA SER SER GLN VAL LYS LEU GLY SER LEU GLN SEQRES 13 A 175 GLN ALA ARG TYR ASP ALA ARG ILE ASP GLN LEU ARG GLN SEQRES 14 A 175 LEU GLN GLU ARG PHE LYS MODRES 5XI8 MSE A 320 MET MODIFIED RESIDUE HET MSE A 320 16 HET MSE A 450 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 HOH *177(H2 O) HELIX 1 AA1 GLY A 308 ALA A 322 1 15 HELIX 2 AA2 LYS A 324 GLU A 339 1 16 HELIX 3 AA3 ASN A 342 GLN A 356 1 15 HELIX 4 AA4 LYS A 358 ASN A 368 1 11 HELIX 5 AA5 ALA A 369 THR A 374 5 6 HELIX 6 AA6 ASN A 375 GLY A 389 1 15 HELIX 7 AA7 GLN A 391 ASN A 406 1 16 HELIX 8 AA8 ASP A 409 LEU A 423 1 15 HELIX 9 AA9 ASN A 425 ALA A 440 1 16 HELIX 10 AB1 ARG A 442 VAL A 457 1 16 HELIX 11 AB2 SER A 461 ARG A 480 1 20 LINK C ALA A 319 N AMSE A 320 1555 1555 1.33 LINK C ALA A 319 N BMSE A 320 1555 1555 1.33 LINK C AMSE A 320 N GLU A 321 1555 1555 1.33 LINK C BMSE A 320 N GLU A 321 1555 1555 1.34 LINK C LEU A 449 N MSE A 450 1555 1555 1.33 LINK C MSE A 450 N SER A 451 1555 1555 1.34 CRYST1 103.963 103.963 81.491 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009619 0.005553 0.000000 0.00000 SCALE2 0.000000 0.011107 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012271 0.00000