HEADER TRANSCRIPTION 01-MAY-17 5XJD TITLE TEAD IN COMPLEX WITH FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL ENHANCER FACTOR TEF-3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 210-427; COMPND 5 SYNONYM: ETF-RELATED FACTOR 2,ETFR-2,TEA DOMAIN FAMILY MEMBER 4,TEAD- COMPND 6 4,TEF-1-RELATED FACTOR 1,TEF-1-RELATED FACTOR FR-19,RTEF-1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TEAD4, TCF13R1, TEF3, TEFR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION FACTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR H.Y.K.KAAN,A.Y.L.SIM,S.K.J.TAN,C.VERMA,H.SONG REVDAT 3 22-NOV-23 5XJD 1 REMARK REVDAT 2 01-MAY-19 5XJD 1 JRNL REVDAT 1 24-JAN-18 5XJD 0 JRNL AUTH H.Y.K.KAAN,A.Y.L.SIM,S.K.J.TAN,C.VERMA,H.SONG JRNL TITL TARGETING YAP/TAZ-TEAD PROTEIN-PROTEIN INTERACTIONS USING JRNL TITL 2 FRAGMENT-BASED AND COMPUTATIONAL MODELING APPROACHES. JRNL REF PLOS ONE V. 12 78381 2017 JRNL REFN ESSN 1932-6203 JRNL PMID 28570566 JRNL DOI 10.1371/JOURNAL.PONE.0178381 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.Y.K.KAAN,S.W.CHAN,S.K.J.TAN,F.GUO,C.J.LIM,W.HONG,H.SONG REMARK 1 TITL CRYSTAL STRUCTURE OF TAZ-TEAD COMPLEX REVEALS A DISTINCT REMARK 1 TITL 2 INTERACTION MODE FROM THAT OF YAP-TEAD COMPLEX. REMARK 1 REF SCI REP V. 7 2035 2017 REMARK 1 REFN ESSN 2045-2322 REMARK 1 PMID 28515457 REMARK 1 DOI 10.1038/S41598-017-02219-9 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 34696 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1777 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.27 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2528 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 131 REMARK 3 BIN FREE R VALUE : 0.2360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3450 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 117 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.11000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : 0.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.190 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.163 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.585 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3606 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3240 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4865 ; 1.524 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7532 ; 0.904 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 419 ; 7.101 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 185 ;37.319 ;24.054 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 635 ;12.942 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;18.822 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 518 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3955 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 781 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1691 ; 3.433 ; 3.032 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1689 ; 3.428 ; 3.029 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2105 ; 5.189 ; 4.521 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2105 ; 5.188 ; 4.521 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1914 ; 4.312 ; 3.585 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1915 ; 4.311 ; 3.586 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2761 ; 6.418 ; 5.178 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3765 ; 8.912 ;35.019 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3759 ; 8.911 ;34.941 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 210 425 B 210 425 12642 0.11 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 426 REMARK 3 ORIGIN FOR THE GROUP (A): -74.9990 -44.5900 -46.3050 REMARK 3 T TENSOR REMARK 3 T11: 0.0726 T22: 0.1859 REMARK 3 T33: 0.0391 T12: 0.0591 REMARK 3 T13: 0.0238 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 3.9884 L22: 0.9481 REMARK 3 L33: 1.9992 L12: 1.4692 REMARK 3 L13: 1.7552 L23: 0.9939 REMARK 3 S TENSOR REMARK 3 S11: -0.0080 S12: -0.3386 S13: -0.0907 REMARK 3 S21: 0.0472 S22: 0.0969 S23: -0.0321 REMARK 3 S31: 0.0151 S32: -0.0350 S33: -0.0889 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 209 B 427 REMARK 3 ORIGIN FOR THE GROUP (A): -68.1720 -22.2100 -14.6170 REMARK 3 T TENSOR REMARK 3 T11: 0.0934 T22: 0.1547 REMARK 3 T33: 0.0269 T12: 0.0260 REMARK 3 T13: 0.0411 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 1.4848 L22: 1.1494 REMARK 3 L33: 1.7302 L12: -0.7578 REMARK 3 L13: -0.3150 L23: 0.5081 REMARK 3 S TENSOR REMARK 3 S11: -0.0213 S12: 0.2394 S13: -0.0721 REMARK 3 S21: 0.0001 S22: -0.0540 S23: -0.0217 REMARK 3 S31: 0.2240 S32: 0.1078 S33: 0.0752 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5XJD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1300003623. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 193 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36473 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3L15 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.6M SODIUM FORMATE, 0.1M TRIS PH 8.4, REMARK 280 5 % GLYCEROL, 2MM MAGNESIUM CHLORIDE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 126.25000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.25000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.25000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 189.37500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.25000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.25000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 63.12500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.25000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.25000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 189.37500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.25000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.25000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 63.12500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 126.25000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 208 REMARK 465 MET A 209 REMARK 465 SER A 246 REMARK 465 SER A 247 REMARK 465 PRO A 248 REMARK 465 SER A 249 REMARK 465 TYR A 250 REMARK 465 SER A 251 REMARK 465 ASP A 301 REMARK 465 GLU A 302 REMARK 465 GLU A 427 REMARK 465 SER B 208 REMARK 465 SER B 246 REMARK 465 SER B 247 REMARK 465 PRO B 248 REMARK 465 SER B 249 REMARK 465 TYR B 250 REMARK 465 SER B 251 REMARK 465 ASP B 252 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 210 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 252 CG OD1 OD2 REMARK 470 ASP A 300 CG OD1 OD2 REMARK 470 GLU A 414 CG CD OE1 OE2 REMARK 470 MET B 209 CG SD CE REMARK 470 ARG B 210 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 302 CG CD OE1 OE2 REMARK 470 GLU B 414 CG CD OE1 OE2 REMARK 470 HIS B 415 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 350 OH TYR A 350 8334 1.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 214 -168.44 -102.46 REMARK 500 HIS A 242 118.15 -165.32 REMARK 500 LYS A 270 -150.65 78.11 REMARK 500 SER A 304 47.16 -87.84 REMARK 500 GLU A 414 -9.22 78.52 REMARK 500 SER B 214 -168.62 -105.48 REMARK 500 LYS B 270 -105.09 -70.71 REMARK 500 ASP B 300 -73.91 -69.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 87L B 501 DBREF 5XJD A 210 427 UNP Q62296 TEAD4_MOUSE 210 427 DBREF 5XJD B 210 427 UNP Q62296 TEAD4_MOUSE 210 427 SEQADV 5XJD SER A 208 UNP Q62296 EXPRESSION TAG SEQADV 5XJD MET A 209 UNP Q62296 EXPRESSION TAG SEQADV 5XJD SER B 208 UNP Q62296 EXPRESSION TAG SEQADV 5XJD MET B 209 UNP Q62296 EXPRESSION TAG SEQRES 1 A 220 SER MET ARG SER ILE ALA SER SER LYS LEU TRP MET LEU SEQRES 2 A 220 GLU PHE SER ALA PHE LEU GLU ARG GLN GLN ASP PRO ASP SEQRES 3 A 220 THR TYR ASN LYS HIS LEU PHE VAL HIS ILE SER GLN SER SEQRES 4 A 220 SER PRO SER TYR SER ASP PRO TYR LEU GLU THR VAL ASP SEQRES 5 A 220 ILE ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY SEQRES 6 A 220 GLY LEU LYS GLU LEU PHE GLU ARG GLY PRO SER ASN ALA SEQRES 7 A 220 PHE PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN THR ASN SEQRES 8 A 220 ILE ASP ASP GLU GLY SER ALA PHE TYR GLY VAL SER SER SEQRES 9 A 220 GLN TYR GLU SER PRO GLU ASN MET ILE ILE THR CYS SER SEQRES 10 A 220 THR LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS SEQRES 11 A 220 VAL GLU THR GLU TYR ALA ARG TYR GLU ASN GLY HIS TYR SEQRES 12 A 220 LEU TYR ARG ILE HIS ARG SER PRO LEU CYS GLU TYR MET SEQRES 13 A 220 ILE ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS SEQRES 14 A 220 TYR MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU SEQRES 15 A 220 GLN VAL VAL THR ASN ARG ASP THR GLN GLU THR LEU LEU SEQRES 16 A 220 CYS ILE ALA TYR VAL PHE GLU VAL SER ALA SER GLU HIS SEQRES 17 A 220 GLY ALA GLN HIS HIS ILE TYR ARG LEU VAL LYS GLU SEQRES 1 B 220 SER MET ARG SER ILE ALA SER SER LYS LEU TRP MET LEU SEQRES 2 B 220 GLU PHE SER ALA PHE LEU GLU ARG GLN GLN ASP PRO ASP SEQRES 3 B 220 THR TYR ASN LYS HIS LEU PHE VAL HIS ILE SER GLN SER SEQRES 4 B 220 SER PRO SER TYR SER ASP PRO TYR LEU GLU THR VAL ASP SEQRES 5 B 220 ILE ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY SEQRES 6 B 220 GLY LEU LYS GLU LEU PHE GLU ARG GLY PRO SER ASN ALA SEQRES 7 B 220 PHE PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN THR ASN SEQRES 8 B 220 ILE ASP ASP GLU GLY SER ALA PHE TYR GLY VAL SER SER SEQRES 9 B 220 GLN TYR GLU SER PRO GLU ASN MET ILE ILE THR CYS SER SEQRES 10 B 220 THR LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS SEQRES 11 B 220 VAL GLU THR GLU TYR ALA ARG TYR GLU ASN GLY HIS TYR SEQRES 12 B 220 LEU TYR ARG ILE HIS ARG SER PRO LEU CYS GLU TYR MET SEQRES 13 B 220 ILE ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS SEQRES 14 B 220 TYR MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU SEQRES 15 B 220 GLN VAL VAL THR ASN ARG ASP THR GLN GLU THR LEU LEU SEQRES 16 B 220 CYS ILE ALA TYR VAL PHE GLU VAL SER ALA SER GLU HIS SEQRES 17 B 220 GLY ALA GLN HIS HIS ILE TYR ARG LEU VAL LYS GLU HET 87L B 501 15 HETNAM 87L (2S)-2-PHENYL-2-PYRROL-1-YL-ETHANOIC ACID FORMUL 3 87L C12 H11 N O2 FORMUL 4 HOH *117(H2 O) HELIX 1 AA1 ARG A 261 PHE A 267 5 7 HELIX 2 AA2 GLY A 273 GLY A 281 1 9 HELIX 3 AA3 PRO A 282 ASN A 284 5 3 HELIX 4 AA4 CYS A 360 LEU A 373 1 14 HELIX 5 AA5 GLU A 375 GLU A 384 1 10 HELIX 6 AA6 ARG B 261 PHE B 267 5 7 HELIX 7 AA7 GLY B 273 GLY B 281 1 9 HELIX 8 AA8 PRO B 282 ASN B 284 5 3 HELIX 9 AA9 ASP B 301 GLY B 303 5 3 HELIX 10 AB1 CYS B 360 LEU B 373 1 14 HELIX 11 AB2 GLU B 375 GLU B 384 1 10 SHEET 1 AA1 5 TYR A 235 SER A 244 0 SHEET 2 AA1 5 TRP A 218 GLN A 229 -1 N LEU A 226 O HIS A 238 SHEET 3 AA1 5 ALA A 305 SER A 315 -1 O GLN A 312 N LEU A 220 SHEET 4 AA1 5 HIS A 349 PRO A 358 -1 O ILE A 354 N SER A 311 SHEET 5 AA1 5 ARG A 344 GLU A 346 -1 N GLU A 346 O HIS A 349 SHEET 1 AA2 7 GLU A 256 ASP A 259 0 SHEET 2 AA2 7 GLN A 418 VAL A 425 1 O ARG A 423 N GLU A 256 SHEET 3 AA2 7 PHE A 286 ALA A 293 -1 N LEU A 288 O TYR A 422 SHEET 4 AA2 7 THR A 400 VAL A 410 1 O ALA A 405 N VAL A 289 SHEET 5 AA2 7 PHE A 386 ASN A 394 -1 N VAL A 392 O LEU A 402 SHEET 6 AA2 7 ILE A 321 SER A 329 -1 N CYS A 328 O THR A 387 SHEET 7 AA2 7 LYS A 332 GLU A 341 -1 O GLU A 339 N CYS A 323 SHEET 1 AA3 5 TYR B 235 SER B 244 0 SHEET 2 AA3 5 TRP B 218 GLN B 229 -1 N LEU B 226 O HIS B 238 SHEET 3 AA3 5 ALA B 305 SER B 315 -1 O PHE B 306 N GLU B 227 SHEET 4 AA3 5 HIS B 349 PRO B 358 -1 O TYR B 350 N SER B 315 SHEET 5 AA3 5 ARG B 344 GLU B 346 -1 N ARG B 344 O LEU B 351 SHEET 1 AA4 7 GLU B 256 ASP B 259 0 SHEET 2 AA4 7 GLN B 418 VAL B 425 1 O ARG B 423 N GLU B 256 SHEET 3 AA4 7 PHE B 286 ALA B 293 -1 N LEU B 288 O TYR B 422 SHEET 4 AA4 7 THR B 400 VAL B 410 1 O ALA B 405 N VAL B 289 SHEET 5 AA4 7 PHE B 386 ASN B 394 -1 N VAL B 392 O LEU B 402 SHEET 6 AA4 7 ILE B 321 SER B 329 -1 N CYS B 328 O THR B 387 SHEET 7 AA4 7 LYS B 332 GLU B 341 -1 O GLU B 339 N CYS B 323 CISPEP 1 GLY A 281 PRO A 282 0 -1.34 CISPEP 2 GLY B 281 PRO B 282 0 -0.48 SITE 1 AC1 6 LYS A 369 VAL A 382 PHE B 330 PHE B 366 SITE 2 AC1 6 LYS B 369 VAL B 382 CRYST1 74.500 74.500 252.500 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013423 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013423 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003960 0.00000