data_5XOB # _entry.id 5XOB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.299 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5XOB WWPDB D_1300003633 # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 6AGG _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5XOB _pdbx_database_status.recvd_initial_deposition_date 2017-05-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Dong, J.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-4119-8039 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Mol. Biol.' _citation.journal_id_ASTM JMOBAK _citation.journal_id_CSD 0070 _citation.journal_id_ISSN 1089-8638 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 430 _citation.language ? _citation.page_first 4183 _citation.page_last 4194 _citation.title 'Structure of tRNA-Modifying Enzyme TiaS and Motions of Its Substrate Binding Zinc Ribbon.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.jmb.2018.08.015 _citation.pdbx_database_id_PubMed 30121296 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dong, J.' 1 ? primary 'Li, F.' 2 ? primary 'Gao, F.' 3 ? primary 'Wei, J.' 4 ? primary 'Lin, Y.' 5 ? primary 'Zhang, Y.' 6 ? primary 'Lou, J.' 7 ? primary 'Liu, G.' 8 ? primary 'Dong, Y.' 9 ? primary 'Liu, L.' 10 ? primary 'Liu, H.' 11 ? primary 'Wang, J.' 12 ? primary 'Gong, W.' 13 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5XOB _cell.details ? _cell.formula_units_Z ? _cell.length_a 68.926 _cell.length_a_esd ? _cell.length_b 68.926 _cell.length_b_esd ? _cell.length_c 211.102 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS' 48372.438 1 6.3.4.22 ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'tRNA(Ile2)-agm2C synthetase,tRNA(Ile2) agmatidine synthetase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MRVWVGIDDTDSSRGMC(TPO)TYLAVLAMERVERELGKVIGFPRLIRLNPTIPYKTRGNGAVSFLVEVDDVGELVDVVN EVIIEHAMLDDEKTNPGAVFVDEELAVKLKPFADKAIKDVLQIDEALFVIGKYFIPHLRHKKGRGLIGALAAVGAELEDF TLELIAYRYPERFGTEREYDEESFFDMDYELYPQTFDNVDWCNDVVVCIPNTPCPVLYGIRGESVEALYKAMESVKTEPV DRRMIFVTNHATDMHLIGEEEVHRLENYRSYRLRGRVTLEPYDIEGGHVFFEIDTKFGSVKCAAFEPTKQFRNVIRLLRK GDVVEVYGSMKKDTINLEKIQIVELAEIWVEKNPICPSCGRRMESAGRGQGFRCKKCRTKADEKLREKVERELQPGFYEV PPSARRHLSKPLIRMNVEGRHIFR ; _entity_poly.pdbx_seq_one_letter_code_can ;MRVWVGIDDTDSSRGMCTTYLAVLAMERVERELGKVIGFPRLIRLNPTIPYKTRGNGAVSFLVEVDDVGELVDVVNEVII EHAMLDDEKTNPGAVFVDEELAVKLKPFADKAIKDVLQIDEALFVIGKYFIPHLRHKKGRGLIGALAAVGAELEDFTLEL IAYRYPERFGTEREYDEESFFDMDYELYPQTFDNVDWCNDVVVCIPNTPCPVLYGIRGESVEALYKAMESVKTEPVDRRM IFVTNHATDMHLIGEEEVHRLENYRSYRLRGRVTLEPYDIEGGHVFFEIDTKFGSVKCAAFEPTKQFRNVIRLLRKGDVV EVYGSMKKDTINLEKIQIVELAEIWVEKNPICPSCGRRMESAGRGQGFRCKKCRTKADEKLREKVERELQPGFYEVPPSA RRHLSKPLIRMNVEGRHIFR ; _entity_poly.pdbx_strand_id Z _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 VAL n 1 4 TRP n 1 5 VAL n 1 6 GLY n 1 7 ILE n 1 8 ASP n 1 9 ASP n 1 10 THR n 1 11 ASP n 1 12 SER n 1 13 SER n 1 14 ARG n 1 15 GLY n 1 16 MET n 1 17 CYS n 1 18 TPO n 1 19 THR n 1 20 TYR n 1 21 LEU n 1 22 ALA n 1 23 VAL n 1 24 LEU n 1 25 ALA n 1 26 MET n 1 27 GLU n 1 28 ARG n 1 29 VAL n 1 30 GLU n 1 31 ARG n 1 32 GLU n 1 33 LEU n 1 34 GLY n 1 35 LYS n 1 36 VAL n 1 37 ILE n 1 38 GLY n 1 39 PHE n 1 40 PRO n 1 41 ARG n 1 42 LEU n 1 43 ILE n 1 44 ARG n 1 45 LEU n 1 46 ASN n 1 47 PRO n 1 48 THR n 1 49 ILE n 1 50 PRO n 1 51 TYR n 1 52 LYS n 1 53 THR n 1 54 ARG n 1 55 GLY n 1 56 ASN n 1 57 GLY n 1 58 ALA n 1 59 VAL n 1 60 SER n 1 61 PHE n 1 62 LEU n 1 63 VAL n 1 64 GLU n 1 65 VAL n 1 66 ASP n 1 67 ASP n 1 68 VAL n 1 69 GLY n 1 70 GLU n 1 71 LEU n 1 72 VAL n 1 73 ASP n 1 74 VAL n 1 75 VAL n 1 76 ASN n 1 77 GLU n 1 78 VAL n 1 79 ILE n 1 80 ILE n 1 81 GLU n 1 82 HIS n 1 83 ALA n 1 84 MET n 1 85 LEU n 1 86 ASP n 1 87 ASP n 1 88 GLU n 1 89 LYS n 1 90 THR n 1 91 ASN n 1 92 PRO n 1 93 GLY n 1 94 ALA n 1 95 VAL n 1 96 PHE n 1 97 VAL n 1 98 ASP n 1 99 GLU n 1 100 GLU n 1 101 LEU n 1 102 ALA n 1 103 VAL n 1 104 LYS n 1 105 LEU n 1 106 LYS n 1 107 PRO n 1 108 PHE n 1 109 ALA n 1 110 ASP n 1 111 LYS n 1 112 ALA n 1 113 ILE n 1 114 LYS n 1 115 ASP n 1 116 VAL n 1 117 LEU n 1 118 GLN n 1 119 ILE n 1 120 ASP n 1 121 GLU n 1 122 ALA n 1 123 LEU n 1 124 PHE n 1 125 VAL n 1 126 ILE n 1 127 GLY n 1 128 LYS n 1 129 TYR n 1 130 PHE n 1 131 ILE n 1 132 PRO n 1 133 HIS n 1 134 LEU n 1 135 ARG n 1 136 HIS n 1 137 LYS n 1 138 LYS n 1 139 GLY n 1 140 ARG n 1 141 GLY n 1 142 LEU n 1 143 ILE n 1 144 GLY n 1 145 ALA n 1 146 LEU n 1 147 ALA n 1 148 ALA n 1 149 VAL n 1 150 GLY n 1 151 ALA n 1 152 GLU n 1 153 LEU n 1 154 GLU n 1 155 ASP n 1 156 PHE n 1 157 THR n 1 158 LEU n 1 159 GLU n 1 160 LEU n 1 161 ILE n 1 162 ALA n 1 163 TYR n 1 164 ARG n 1 165 TYR n 1 166 PRO n 1 167 GLU n 1 168 ARG n 1 169 PHE n 1 170 GLY n 1 171 THR n 1 172 GLU n 1 173 ARG n 1 174 GLU n 1 175 TYR n 1 176 ASP n 1 177 GLU n 1 178 GLU n 1 179 SER n 1 180 PHE n 1 181 PHE n 1 182 ASP n 1 183 MET n 1 184 ASP n 1 185 TYR n 1 186 GLU n 1 187 LEU n 1 188 TYR n 1 189 PRO n 1 190 GLN n 1 191 THR n 1 192 PHE n 1 193 ASP n 1 194 ASN n 1 195 VAL n 1 196 ASP n 1 197 TRP n 1 198 CYS n 1 199 ASN n 1 200 ASP n 1 201 VAL n 1 202 VAL n 1 203 VAL n 1 204 CYS n 1 205 ILE n 1 206 PRO n 1 207 ASN n 1 208 THR n 1 209 PRO n 1 210 CYS n 1 211 PRO n 1 212 VAL n 1 213 LEU n 1 214 TYR n 1 215 GLY n 1 216 ILE n 1 217 ARG n 1 218 GLY n 1 219 GLU n 1 220 SER n 1 221 VAL n 1 222 GLU n 1 223 ALA n 1 224 LEU n 1 225 TYR n 1 226 LYS n 1 227 ALA n 1 228 MET n 1 229 GLU n 1 230 SER n 1 231 VAL n 1 232 LYS n 1 233 THR n 1 234 GLU n 1 235 PRO n 1 236 VAL n 1 237 ASP n 1 238 ARG n 1 239 ARG n 1 240 MET n 1 241 ILE n 1 242 PHE n 1 243 VAL n 1 244 THR n 1 245 ASN n 1 246 HIS n 1 247 ALA n 1 248 THR n 1 249 ASP n 1 250 MET n 1 251 HIS n 1 252 LEU n 1 253 ILE n 1 254 GLY n 1 255 GLU n 1 256 GLU n 1 257 GLU n 1 258 VAL n 1 259 HIS n 1 260 ARG n 1 261 LEU n 1 262 GLU n 1 263 ASN n 1 264 TYR n 1 265 ARG n 1 266 SER n 1 267 TYR n 1 268 ARG n 1 269 LEU n 1 270 ARG n 1 271 GLY n 1 272 ARG n 1 273 VAL n 1 274 THR n 1 275 LEU n 1 276 GLU n 1 277 PRO n 1 278 TYR n 1 279 ASP n 1 280 ILE n 1 281 GLU n 1 282 GLY n 1 283 GLY n 1 284 HIS n 1 285 VAL n 1 286 PHE n 1 287 PHE n 1 288 GLU n 1 289 ILE n 1 290 ASP n 1 291 THR n 1 292 LYS n 1 293 PHE n 1 294 GLY n 1 295 SER n 1 296 VAL n 1 297 LYS n 1 298 CYS n 1 299 ALA n 1 300 ALA n 1 301 PHE n 1 302 GLU n 1 303 PRO n 1 304 THR n 1 305 LYS n 1 306 GLN n 1 307 PHE n 1 308 ARG n 1 309 ASN n 1 310 VAL n 1 311 ILE n 1 312 ARG n 1 313 LEU n 1 314 LEU n 1 315 ARG n 1 316 LYS n 1 317 GLY n 1 318 ASP n 1 319 VAL n 1 320 VAL n 1 321 GLU n 1 322 VAL n 1 323 TYR n 1 324 GLY n 1 325 SER n 1 326 MET n 1 327 LYS n 1 328 LYS n 1 329 ASP n 1 330 THR n 1 331 ILE n 1 332 ASN n 1 333 LEU n 1 334 GLU n 1 335 LYS n 1 336 ILE n 1 337 GLN n 1 338 ILE n 1 339 VAL n 1 340 GLU n 1 341 LEU n 1 342 ALA n 1 343 GLU n 1 344 ILE n 1 345 TRP n 1 346 VAL n 1 347 GLU n 1 348 LYS n 1 349 ASN n 1 350 PRO n 1 351 ILE n 1 352 CYS n 1 353 PRO n 1 354 SER n 1 355 CYS n 1 356 GLY n 1 357 ARG n 1 358 ARG n 1 359 MET n 1 360 GLU n 1 361 SER n 1 362 ALA n 1 363 GLY n 1 364 ARG n 1 365 GLY n 1 366 GLN n 1 367 GLY n 1 368 PHE n 1 369 ARG n 1 370 CYS n 1 371 LYS n 1 372 LYS n 1 373 CYS n 1 374 ARG n 1 375 THR n 1 376 LYS n 1 377 ALA n 1 378 ASP n 1 379 GLU n 1 380 LYS n 1 381 LEU n 1 382 ARG n 1 383 GLU n 1 384 LYS n 1 385 VAL n 1 386 GLU n 1 387 ARG n 1 388 GLU n 1 389 LEU n 1 390 GLN n 1 391 PRO n 1 392 GLY n 1 393 PHE n 1 394 TYR n 1 395 GLU n 1 396 VAL n 1 397 PRO n 1 398 PRO n 1 399 SER n 1 400 ALA n 1 401 ARG n 1 402 ARG n 1 403 HIS n 1 404 LEU n 1 405 SER n 1 406 LYS n 1 407 PRO n 1 408 LEU n 1 409 ILE n 1 410 ARG n 1 411 MET n 1 412 ASN n 1 413 VAL n 1 414 GLU n 1 415 GLY n 1 416 ARG n 1 417 HIS n 1 418 ILE n 1 419 PHE n 1 420 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 420 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'tiaS, AF_2259' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224325 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TIAS_ARCFU _struct_ref.pdbx_db_accession O28025 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRVWVGIDDTDSSRGMCTTYLAVLAMERVERELGKVIGFPRLIRLNPTIPYKTRGNGAVSFLVEVDDVGELVDVVNEVII EHAMLDDEKTNPGAVFVDEELAVKLKPFADKAIKDVLQIDEALFVIGKYFIPHLRHKKGRGLIGALAAVGAELEDFTLEL IAYRYPERFGTEREYDEESFFDMDYELYPQTFDNVDWCNDVVVCIPNTPCPVLYGIRGESVEALYKAMESVKTEPVDRRM IFVTNHATDMHLIGEEEVHRLENYRSYRLRGRVTLEPYDIEGGHVFFEIDTKFGSVKCAAFEPTKQFRNVIRLLRKGDVV EVYGSMKKDTINLEKIQIVELAEIWVEKNPICPSCGRRMESAGRGQGFRCKKCRTKADEKLREKVERELQPGFYEVPPSA RRHLSKPLIRMNVEGRHIFR ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5XOB _struct_ref_seq.pdbx_strand_id Z _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 420 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O28025 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 420 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 420 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TPO 'L-peptide linking' n PHOSPHOTHREONINE PHOSPHONOTHREONINE 'C4 H10 N O6 P' 199.099 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5XOB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50mM HEPES-Na pH7.0-7.2, 0.5M NH4Ac, 0.2M MgCl2, 1.5-2.5% PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2010-11-11 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17B1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17B1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5XOB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.47 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18539 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 3.85 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 3.85 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -7.70 _refine.B_iso_max ? _refine.B_iso_mean 83.054 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5XOB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.48 _refine.ls_d_res_low 49.29 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18414 _refine.ls_number_reflns_R_free 962 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.02 _refine.ls_percent_reflns_R_free 5.22 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.24518 _refine.ls_R_factor_R_free 0.29439 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.24465 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.483 _refine.pdbx_overall_ESU_R_Free 0.311 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 14.395 _refine.overall_SU_ML 0.274 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 3282 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3284 _refine_hist.d_res_high 2.48 _refine_hist.d_res_low 49.29 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.019 3348 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 3226 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.224 1.972 4533 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.741 3.000 7424 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.897 5.000 415 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.554 23.782 156 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 19.519 15.000 577 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 19.920 15.000 26 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.067 0.200 505 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.021 3765 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 743 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 3.090 8.075 1666 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.089 8.074 1665 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 5.237 12.100 2079 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 5.236 12.102 2080 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.258 8.572 1682 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.258 8.572 1682 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.714 12.649 2454 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 8.479 62.923 3590 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 8.478 62.934 3591 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.477 _refine_ls_shell.d_res_low 2.541 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 12 _refine_ls_shell.number_reflns_R_work 1310 _refine_ls_shell.percent_reflns_obs 97.06 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.414 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.359 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5XOB _struct.title 'Crystal structure of apo TiaS (tRNAIle2 agmatidine synthetase)' _struct.pdbx_descriptor 'tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS (E.C.6.3.4.22)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5XOB _struct_keywords.text 'zinc ribbon, conformational change, TiaS, tRNA modification, Zinc finger engineering, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 17 ? LEU A 33 ? CYS Z 17 LEU Z 33 1 ? 17 HELX_P HELX_P2 AA2 ASP A 67 ? ALA A 83 ? ASP Z 67 ALA Z 83 1 ? 17 HELX_P HELX_P3 AA3 GLU A 99 ? VAL A 103 ? GLU Z 99 VAL Z 103 1 ? 5 HELX_P HELX_P4 AA4 LEU A 105 ? ASP A 115 ? LEU Z 105 ASP Z 115 1 ? 11 HELX_P HELX_P5 AA5 GLN A 118 ? PHE A 130 ? GLN Z 118 PHE Z 130 1 ? 13 HELX_P HELX_P6 AA6 ARG A 140 ? ALA A 151 ? ARG Z 140 ALA Z 151 1 ? 12 HELX_P HELX_P7 AA7 TYR A 165 ? PHE A 169 ? TYR Z 165 PHE Z 169 5 ? 5 HELX_P HELX_P8 AA8 ASP A 176 ? TYR A 188 ? ASP Z 176 TYR Z 188 1 ? 13 HELX_P HELX_P9 AA9 SER A 220 ? VAL A 231 ? SER Z 220 VAL Z 231 1 ? 12 HELX_P HELX_P10 AB1 GLU A 256 ? VAL A 258 ? GLU Z 256 VAL Z 258 5 ? 3 HELX_P HELX_P11 AB2 PHE A 301 ? LYS A 305 ? PHE Z 301 LYS Z 305 5 ? 5 HELX_P HELX_P12 AB3 GLN A 306 ? LEU A 314 ? GLN Z 306 LEU Z 314 1 ? 9 HELX_P HELX_P13 AB4 PRO A 397 ? ARG A 401 ? PRO Z 397 ARG Z 401 5 ? 5 HELX_P HELX_P14 AB5 PRO A 407 ? MET A 411 ? PRO Z 407 MET Z 411 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A ASP 8 OD1 ? ? ? 1_555 C MG . MG ? ? Z ASP 8 Z MG 502 1_555 ? ? ? ? ? ? ? 2.567 ? covale1 covale both ? A CYS 17 C ? ? ? 1_555 A TPO 18 N ? ? Z CYS 17 Z TPO 18 1_555 ? ? ? ? ? ? ? 1.322 ? metalc2 metalc ? ? A TPO 18 O3P ? ? ? 1_555 C MG . MG ? ? Z TPO 18 Z MG 502 1_555 ? ? ? ? ? ? ? 2.103 ? covale2 covale both ? A TPO 18 C ? ? ? 1_555 A THR 19 N ? ? Z TPO 18 Z THR 19 1_555 ? ? ? ? ? ? ? 1.335 ? metalc3 metalc ? ? A CYS 352 SG ? ? ? 1_555 B ZN . ZN ? ? Z CYS 352 Z ZN 501 1_555 ? ? ? ? ? ? ? 2.457 ? metalc4 metalc ? ? A CYS 355 SG ? ? ? 1_555 B ZN . ZN ? ? Z CYS 355 Z ZN 501 1_555 ? ? ? ? ? ? ? 2.163 ? metalc5 metalc ? ? A CYS 370 SG ? ? ? 1_555 B ZN . ZN ? ? Z CYS 370 Z ZN 501 1_555 ? ? ? ? ? ? ? 2.417 ? metalc6 metalc ? ? A CYS 373 SG ? ? ? 1_555 B ZN . ZN ? ? Z CYS 373 Z ZN 501 1_555 ? ? ? ? ? ? ? 2.541 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 188 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 188 _struct_mon_prot_cis.auth_asym_id Z _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 189 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 189 _struct_mon_prot_cis.pdbx_auth_asym_id_2 Z _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.26 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 6 ? AA5 ? 6 ? AA6 ? 2 ? AA7 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? parallel AA5 4 5 ? anti-parallel AA5 5 6 ? parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 133 ? ARG A 135 ? HIS Z 133 ARG Z 135 AA1 2 GLY A 93 ? ASP A 98 ? GLY Z 93 ASP Z 98 AA1 3 ARG A 2 ? ASP A 8 ? ARG Z 2 ASP Z 8 AA1 4 GLY A 57 ? GLU A 64 ? GLY Z 57 GLU Z 64 AA1 5 LYS A 35 ? ARG A 44 ? LYS Z 35 ARG Z 44 AA1 6 ARG A 239 ? THR A 244 ? ARG Z 239 THR Z 244 AA1 7 THR A 157 ? TYR A 163 ? THR Z 157 TYR Z 163 AA1 8 VAL A 212 ? GLY A 218 ? VAL Z 212 GLY Z 218 AA2 1 VAL A 195 ? ASP A 196 ? VAL Z 195 ASP Z 196 AA2 2 VAL A 201 ? VAL A 202 ? VAL Z 201 VAL Z 202 AA3 1 LEU A 252 ? GLY A 254 ? LEU Z 252 GLY Z 254 AA3 2 ARG A 265 ? VAL A 273 ? ARG Z 265 VAL Z 273 AA3 3 HIS A 284 ? THR A 291 ? HIS Z 284 THR Z 291 AA3 4 TYR A 278 ? ILE A 280 ? TYR Z 278 ILE Z 280 AA4 1 LEU A 252 ? GLY A 254 ? LEU Z 252 GLY Z 254 AA4 2 ARG A 265 ? VAL A 273 ? ARG Z 265 VAL Z 273 AA4 3 VAL A 319 ? LYS A 327 ? VAL Z 319 LYS Z 327 AA4 4 THR A 330 ? ILE A 338 ? THR Z 330 ILE Z 338 AA4 5 GLY A 392 ? GLU A 395 ? GLY Z 392 GLU Z 395 AA4 6 ARG A 416 ? HIS A 417 ? ARG Z 416 HIS Z 417 AA5 1 TYR A 278 ? ILE A 280 ? TYR Z 278 ILE Z 280 AA5 2 HIS A 284 ? THR A 291 ? HIS Z 284 THR Z 291 AA5 3 GLY A 294 ? ALA A 300 ? GLY Z 294 ALA Z 300 AA5 4 THR A 330 ? ILE A 338 ? THR Z 330 ILE Z 338 AA5 5 GLY A 392 ? GLU A 395 ? GLY Z 392 GLU Z 395 AA5 6 ARG A 416 ? HIS A 417 ? ARG Z 416 HIS Z 417 AA6 1 TRP A 345 ? LYS A 348 ? TRP Z 345 LYS Z 348 AA6 2 LEU A 381 ? LYS A 384 ? LEU Z 381 LYS Z 384 AA7 1 GLU A 360 ? SER A 361 ? GLU Z 360 SER Z 361 AA7 2 PHE A 368 ? CYS A 370 ? PHE Z 368 CYS Z 370 AA7 3 THR A 375 ? ALA A 377 ? THR Z 375 ALA Z 377 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 134 ? O LEU Z 134 N ALA A 94 ? N ALA Z 94 AA1 2 3 O VAL A 97 ? O VAL Z 97 N TRP A 4 ? N TRP Z 4 AA1 3 4 N VAL A 5 ? N VAL Z 5 O PHE A 61 ? O PHE Z 61 AA1 4 5 O LEU A 62 ? O LEU Z 62 N ILE A 37 ? N ILE Z 37 AA1 5 6 N LEU A 42 ? N LEU Z 42 O VAL A 243 ? O VAL Z 243 AA1 6 7 O THR A 244 ? O THR Z 244 N THR A 157 ? N THR Z 157 AA1 7 8 N ALA A 162 ? N ALA Z 162 O TYR A 214 ? O TYR Z 214 AA2 1 2 N ASP A 196 ? N ASP Z 196 O VAL A 201 ? O VAL Z 201 AA3 1 2 N ILE A 253 ? N ILE Z 253 O SER A 266 ? O SER Z 266 AA3 2 3 N ARG A 272 ? N ARG Z 272 O ASP A 290 ? O ASP Z 290 AA3 3 4 O PHE A 286 ? O PHE Z 286 N TYR A 278 ? N TYR Z 278 AA4 1 2 N ILE A 253 ? N ILE Z 253 O SER A 266 ? O SER Z 266 AA4 2 3 N LEU A 269 ? N LEU Z 269 O VAL A 322 ? O VAL Z 322 AA4 3 4 N SER A 325 ? N SER Z 325 O ASN A 332 ? O ASN Z 332 AA4 4 5 N ILE A 338 ? N ILE Z 338 O GLY A 392 ? O GLY Z 392 AA4 5 6 N PHE A 393 ? N PHE Z 393 O HIS A 417 ? O HIS Z 417 AA5 1 2 N TYR A 278 ? N TYR Z 278 O PHE A 286 ? O PHE Z 286 AA5 2 3 N THR A 291 ? N THR Z 291 O GLY A 294 ? O GLY Z 294 AA5 3 4 N LYS A 297 ? N LYS Z 297 O ILE A 331 ? O ILE Z 331 AA5 4 5 N ILE A 338 ? N ILE Z 338 O GLY A 392 ? O GLY Z 392 AA5 5 6 N PHE A 393 ? N PHE Z 393 O HIS A 417 ? O HIS Z 417 AA6 1 2 N LYS A 348 ? N LYS Z 348 O LEU A 381 ? O LEU Z 381 AA7 1 2 N GLU A 360 ? N GLU Z 360 O ARG A 369 ? O ARG Z 369 AA7 2 3 N PHE A 368 ? N PHE Z 368 O ALA A 377 ? O ALA Z 377 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software Z ZN 501 ? 4 'binding site for residue ZN Z 501' AC2 Software Z MG 502 ? 3 'binding site for residue MG Z 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 352 ? CYS Z 352 . ? 1_555 ? 2 AC1 4 CYS A 355 ? CYS Z 355 . ? 1_555 ? 3 AC1 4 CYS A 370 ? CYS Z 370 . ? 1_555 ? 4 AC1 4 CYS A 373 ? CYS Z 373 . ? 1_555 ? 5 AC2 3 ASP A 8 ? ASP Z 8 . ? 1_555 ? 6 AC2 3 TPO A 18 ? TPO Z 18 . ? 1_555 ? 7 AC2 3 GLY A 57 ? GLY Z 57 . ? 1_555 ? # _atom_sites.entry_id 5XOB _atom_sites.fract_transf_matrix[1][1] 0.014508 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014508 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004737 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET Z . n A 1 2 ARG 2 2 2 ARG ARG Z . n A 1 3 VAL 3 3 3 VAL VAL Z . n A 1 4 TRP 4 4 4 TRP TRP Z . n A 1 5 VAL 5 5 5 VAL VAL Z . n A 1 6 GLY 6 6 6 GLY GLY Z . n A 1 7 ILE 7 7 7 ILE ILE Z . n A 1 8 ASP 8 8 8 ASP ASP Z . n A 1 9 ASP 9 9 9 ASP ASP Z . n A 1 10 THR 10 10 10 THR THR Z . n A 1 11 ASP 11 11 11 ASP ASP Z . n A 1 12 SER 12 12 12 SER SER Z . n A 1 13 SER 13 13 13 SER SER Z . n A 1 14 ARG 14 14 14 ARG ALA Z . n A 1 15 GLY 15 15 15 GLY GLY Z . n A 1 16 MET 16 16 16 MET MET Z . n A 1 17 CYS 17 17 17 CYS CYS Z . n A 1 18 TPO 18 18 18 TPO TPO Z . n A 1 19 THR 19 19 19 THR THR Z . n A 1 20 TYR 20 20 20 TYR TYR Z . n A 1 21 LEU 21 21 21 LEU LEU Z . n A 1 22 ALA 22 22 22 ALA ALA Z . n A 1 23 VAL 23 23 23 VAL VAL Z . n A 1 24 LEU 24 24 24 LEU LEU Z . n A 1 25 ALA 25 25 25 ALA ALA Z . n A 1 26 MET 26 26 26 MET MET Z . n A 1 27 GLU 27 27 27 GLU GLU Z . n A 1 28 ARG 28 28 28 ARG ARG Z . n A 1 29 VAL 29 29 29 VAL VAL Z . n A 1 30 GLU 30 30 30 GLU GLU Z . n A 1 31 ARG 31 31 31 ARG ARG Z . n A 1 32 GLU 32 32 32 GLU GLU Z . n A 1 33 LEU 33 33 33 LEU LEU Z . n A 1 34 GLY 34 34 34 GLY GLY Z . n A 1 35 LYS 35 35 35 LYS ALA Z . n A 1 36 VAL 36 36 36 VAL VAL Z . n A 1 37 ILE 37 37 37 ILE ILE Z . n A 1 38 GLY 38 38 38 GLY GLY Z . n A 1 39 PHE 39 39 39 PHE PHE Z . n A 1 40 PRO 40 40 40 PRO PRO Z . n A 1 41 ARG 41 41 41 ARG ARG Z . n A 1 42 LEU 42 42 42 LEU LEU Z . n A 1 43 ILE 43 43 43 ILE ILE Z . n A 1 44 ARG 44 44 44 ARG ARG Z . n A 1 45 LEU 45 45 45 LEU LEU Z . n A 1 46 ASN 46 46 46 ASN ASN Z . n A 1 47 PRO 47 47 47 PRO PRO Z . n A 1 48 THR 48 48 48 THR THR Z . n A 1 49 ILE 49 49 49 ILE ILE Z . n A 1 50 PRO 50 50 50 PRO PRO Z . n A 1 51 TYR 51 51 ? ? ? Z . n A 1 52 LYS 52 52 ? ? ? Z . n A 1 53 THR 53 53 ? ? ? Z . n A 1 54 ARG 54 54 54 ARG ALA Z . n A 1 55 GLY 55 55 55 GLY GLY Z . n A 1 56 ASN 56 56 56 ASN ASN Z . n A 1 57 GLY 57 57 57 GLY GLY Z . n A 1 58 ALA 58 58 58 ALA ALA Z . n A 1 59 VAL 59 59 59 VAL VAL Z . n A 1 60 SER 60 60 60 SER SER Z . n A 1 61 PHE 61 61 61 PHE PHE Z . n A 1 62 LEU 62 62 62 LEU LEU Z . n A 1 63 VAL 63 63 63 VAL VAL Z . n A 1 64 GLU 64 64 64 GLU GLU Z . n A 1 65 VAL 65 65 65 VAL VAL Z . n A 1 66 ASP 66 66 66 ASP ASP Z . n A 1 67 ASP 67 67 67 ASP ASP Z . n A 1 68 VAL 68 68 68 VAL VAL Z . n A 1 69 GLY 69 69 69 GLY GLY Z . n A 1 70 GLU 70 70 70 GLU GLU Z . n A 1 71 LEU 71 71 71 LEU LEU Z . n A 1 72 VAL 72 72 72 VAL VAL Z . n A 1 73 ASP 73 73 73 ASP ASP Z . n A 1 74 VAL 74 74 74 VAL VAL Z . n A 1 75 VAL 75 75 75 VAL VAL Z . n A 1 76 ASN 76 76 76 ASN ASN Z . n A 1 77 GLU 77 77 77 GLU GLU Z . n A 1 78 VAL 78 78 78 VAL VAL Z . n A 1 79 ILE 79 79 79 ILE ILE Z . n A 1 80 ILE 80 80 80 ILE ILE Z . n A 1 81 GLU 81 81 81 GLU GLU Z . n A 1 82 HIS 82 82 82 HIS HIS Z . n A 1 83 ALA 83 83 83 ALA ALA Z . n A 1 84 MET 84 84 84 MET MET Z . n A 1 85 LEU 85 85 85 LEU LEU Z . n A 1 86 ASP 86 86 86 ASP ASP Z . n A 1 87 ASP 87 87 87 ASP ASP Z . n A 1 88 GLU 88 88 88 GLU GLU Z . n A 1 89 LYS 89 89 89 LYS LYS Z . n A 1 90 THR 90 90 90 THR THR Z . n A 1 91 ASN 91 91 91 ASN ASN Z . n A 1 92 PRO 92 92 92 PRO PRO Z . n A 1 93 GLY 93 93 93 GLY GLY Z . n A 1 94 ALA 94 94 94 ALA ALA Z . n A 1 95 VAL 95 95 95 VAL VAL Z . n A 1 96 PHE 96 96 96 PHE PHE Z . n A 1 97 VAL 97 97 97 VAL VAL Z . n A 1 98 ASP 98 98 98 ASP ALA Z . n A 1 99 GLU 99 99 99 GLU GLU Z . n A 1 100 GLU 100 100 100 GLU GLU Z . n A 1 101 LEU 101 101 101 LEU LEU Z . n A 1 102 ALA 102 102 102 ALA ALA Z . n A 1 103 VAL 103 103 103 VAL VAL Z . n A 1 104 LYS 104 104 104 LYS LYS Z . n A 1 105 LEU 105 105 105 LEU LEU Z . n A 1 106 LYS 106 106 106 LYS LYS Z . n A 1 107 PRO 107 107 107 PRO PRO Z . n A 1 108 PHE 108 108 108 PHE PHE Z . n A 1 109 ALA 109 109 109 ALA ALA Z . n A 1 110 ASP 110 110 110 ASP ASP Z . n A 1 111 LYS 111 111 111 LYS LYS Z . n A 1 112 ALA 112 112 112 ALA ALA Z . n A 1 113 ILE 113 113 113 ILE ILE Z . n A 1 114 LYS 114 114 114 LYS LYS Z . n A 1 115 ASP 115 115 115 ASP ASP Z . n A 1 116 VAL 116 116 116 VAL VAL Z . n A 1 117 LEU 117 117 117 LEU LEU Z . n A 1 118 GLN 118 118 118 GLN GLN Z . n A 1 119 ILE 119 119 119 ILE ILE Z . n A 1 120 ASP 120 120 120 ASP ASP Z . n A 1 121 GLU 121 121 121 GLU GLU Z . n A 1 122 ALA 122 122 122 ALA ALA Z . n A 1 123 LEU 123 123 123 LEU LEU Z . n A 1 124 PHE 124 124 124 PHE PHE Z . n A 1 125 VAL 125 125 125 VAL VAL Z . n A 1 126 ILE 126 126 126 ILE ILE Z . n A 1 127 GLY 127 127 127 GLY GLY Z . n A 1 128 LYS 128 128 128 LYS LYS Z . n A 1 129 TYR 129 129 129 TYR TYR Z . n A 1 130 PHE 130 130 130 PHE PHE Z . n A 1 131 ILE 131 131 131 ILE ILE Z . n A 1 132 PRO 132 132 132 PRO PRO Z . n A 1 133 HIS 133 133 133 HIS HIS Z . n A 1 134 LEU 134 134 134 LEU LEU Z . n A 1 135 ARG 135 135 135 ARG ARG Z . n A 1 136 HIS 136 136 136 HIS HIS Z . n A 1 137 LYS 137 137 137 LYS LYS Z . n A 1 138 LYS 138 138 138 LYS LYS Z . n A 1 139 GLY 139 139 139 GLY GLY Z . n A 1 140 ARG 140 140 140 ARG ALA Z . n A 1 141 GLY 141 141 141 GLY GLY Z . n A 1 142 LEU 142 142 142 LEU LEU Z . n A 1 143 ILE 143 143 143 ILE ILE Z . n A 1 144 GLY 144 144 144 GLY GLY Z . n A 1 145 ALA 145 145 145 ALA ALA Z . n A 1 146 LEU 146 146 146 LEU LEU Z . n A 1 147 ALA 147 147 147 ALA ALA Z . n A 1 148 ALA 148 148 148 ALA ALA Z . n A 1 149 VAL 149 149 149 VAL VAL Z . n A 1 150 GLY 150 150 150 GLY GLY Z . n A 1 151 ALA 151 151 151 ALA ALA Z . n A 1 152 GLU 152 152 152 GLU GLU Z . n A 1 153 LEU 153 153 153 LEU LEU Z . n A 1 154 GLU 154 154 154 GLU GLU Z . n A 1 155 ASP 155 155 155 ASP ASP Z . n A 1 156 PHE 156 156 156 PHE PHE Z . n A 1 157 THR 157 157 157 THR THR Z . n A 1 158 LEU 158 158 158 LEU LEU Z . n A 1 159 GLU 159 159 159 GLU GLU Z . n A 1 160 LEU 160 160 160 LEU LEU Z . n A 1 161 ILE 161 161 161 ILE ILE Z . n A 1 162 ALA 162 162 162 ALA ALA Z . n A 1 163 TYR 163 163 163 TYR TYR Z . n A 1 164 ARG 164 164 164 ARG ARG Z . n A 1 165 TYR 165 165 165 TYR TYR Z . n A 1 166 PRO 166 166 166 PRO PRO Z . n A 1 167 GLU 167 167 167 GLU GLU Z . n A 1 168 ARG 168 168 168 ARG ARG Z . n A 1 169 PHE 169 169 169 PHE PHE Z . n A 1 170 GLY 170 170 170 GLY GLY Z . n A 1 171 THR 171 171 171 THR THR Z . n A 1 172 GLU 172 172 172 GLU GLU Z . n A 1 173 ARG 173 173 173 ARG ARG Z . n A 1 174 GLU 174 174 174 GLU ALA Z . n A 1 175 TYR 175 175 175 TYR TYR Z . n A 1 176 ASP 176 176 176 ASP ASP Z . n A 1 177 GLU 177 177 177 GLU GLU Z . n A 1 178 GLU 178 178 178 GLU GLU Z . n A 1 179 SER 179 179 179 SER SER Z . n A 1 180 PHE 180 180 180 PHE PHE Z . n A 1 181 PHE 181 181 181 PHE PHE Z . n A 1 182 ASP 182 182 182 ASP ASP Z . n A 1 183 MET 183 183 183 MET MET Z . n A 1 184 ASP 184 184 184 ASP ASP Z . n A 1 185 TYR 185 185 185 TYR ALA Z . n A 1 186 GLU 186 186 186 GLU GLU Z . n A 1 187 LEU 187 187 187 LEU LEU Z . n A 1 188 TYR 188 188 188 TYR TYR Z . n A 1 189 PRO 189 189 189 PRO PRO Z . n A 1 190 GLN 190 190 190 GLN GLN Z . n A 1 191 THR 191 191 191 THR THR Z . n A 1 192 PHE 192 192 192 PHE PHE Z . n A 1 193 ASP 193 193 193 ASP ASP Z . n A 1 194 ASN 194 194 194 ASN ASN Z . n A 1 195 VAL 195 195 195 VAL VAL Z . n A 1 196 ASP 196 196 196 ASP ASP Z . n A 1 197 TRP 197 197 197 TRP TRP Z . n A 1 198 CYS 198 198 198 CYS CYS Z . n A 1 199 ASN 199 199 199 ASN ASN Z . n A 1 200 ASP 200 200 200 ASP ASP Z . n A 1 201 VAL 201 201 201 VAL VAL Z . n A 1 202 VAL 202 202 202 VAL VAL Z . n A 1 203 VAL 203 203 203 VAL VAL Z . n A 1 204 CYS 204 204 204 CYS CYS Z . n A 1 205 ILE 205 205 205 ILE ILE Z . n A 1 206 PRO 206 206 206 PRO PRO Z . n A 1 207 ASN 207 207 207 ASN ASN Z . n A 1 208 THR 208 208 208 THR THR Z . n A 1 209 PRO 209 209 209 PRO PRO Z . n A 1 210 CYS 210 210 210 CYS CYS Z . n A 1 211 PRO 211 211 211 PRO PRO Z . n A 1 212 VAL 212 212 212 VAL VAL Z . n A 1 213 LEU 213 213 213 LEU LEU Z . n A 1 214 TYR 214 214 214 TYR TYR Z . n A 1 215 GLY 215 215 215 GLY GLY Z . n A 1 216 ILE 216 216 216 ILE ILE Z . n A 1 217 ARG 217 217 217 ARG ARG Z . n A 1 218 GLY 218 218 218 GLY GLY Z . n A 1 219 GLU 219 219 219 GLU GLU Z . n A 1 220 SER 220 220 220 SER SER Z . n A 1 221 VAL 221 221 221 VAL VAL Z . n A 1 222 GLU 222 222 222 GLU GLU Z . n A 1 223 ALA 223 223 223 ALA ALA Z . n A 1 224 LEU 224 224 224 LEU LEU Z . n A 1 225 TYR 225 225 225 TYR TYR Z . n A 1 226 LYS 226 226 226 LYS LYS Z . n A 1 227 ALA 227 227 227 ALA ALA Z . n A 1 228 MET 228 228 228 MET MET Z . n A 1 229 GLU 229 229 229 GLU ALA Z . n A 1 230 SER 230 230 230 SER SER Z . n A 1 231 VAL 231 231 231 VAL VAL Z . n A 1 232 LYS 232 232 232 LYS LYS Z . n A 1 233 THR 233 233 233 THR THR Z . n A 1 234 GLU 234 234 234 GLU GLU Z . n A 1 235 PRO 235 235 235 PRO PRO Z . n A 1 236 VAL 236 236 236 VAL VAL Z . n A 1 237 ASP 237 237 237 ASP ASP Z . n A 1 238 ARG 238 238 238 ARG ARG Z . n A 1 239 ARG 239 239 239 ARG ARG Z . n A 1 240 MET 240 240 240 MET MET Z . n A 1 241 ILE 241 241 241 ILE ILE Z . n A 1 242 PHE 242 242 242 PHE PHE Z . n A 1 243 VAL 243 243 243 VAL VAL Z . n A 1 244 THR 244 244 244 THR THR Z . n A 1 245 ASN 245 245 245 ASN ASN Z . n A 1 246 HIS 246 246 246 HIS HIS Z . n A 1 247 ALA 247 247 247 ALA ALA Z . n A 1 248 THR 248 248 248 THR THR Z . n A 1 249 ASP 249 249 249 ASP ASP Z . n A 1 250 MET 250 250 250 MET MET Z . n A 1 251 HIS 251 251 251 HIS HIS Z . n A 1 252 LEU 252 252 252 LEU LEU Z . n A 1 253 ILE 253 253 253 ILE ILE Z . n A 1 254 GLY 254 254 254 GLY GLY Z . n A 1 255 GLU 255 255 255 GLU GLU Z . n A 1 256 GLU 256 256 256 GLU GLU Z . n A 1 257 GLU 257 257 257 GLU GLU Z . n A 1 258 VAL 258 258 258 VAL VAL Z . n A 1 259 HIS 259 259 259 HIS HIS Z . n A 1 260 ARG 260 260 260 ARG ALA Z . n A 1 261 LEU 261 261 261 LEU LEU Z . n A 1 262 GLU 262 262 262 GLU GLU Z . n A 1 263 ASN 263 263 263 ASN ASN Z . n A 1 264 TYR 264 264 264 TYR TYR Z . n A 1 265 ARG 265 265 265 ARG ARG Z . n A 1 266 SER 266 266 266 SER SER Z . n A 1 267 TYR 267 267 267 TYR TYR Z . n A 1 268 ARG 268 268 268 ARG ARG Z . n A 1 269 LEU 269 269 269 LEU LEU Z . n A 1 270 ARG 270 270 270 ARG ALA Z . n A 1 271 GLY 271 271 271 GLY GLY Z . n A 1 272 ARG 272 272 272 ARG ARG Z . n A 1 273 VAL 273 273 273 VAL VAL Z . n A 1 274 THR 274 274 274 THR THR Z . n A 1 275 LEU 275 275 275 LEU LEU Z . n A 1 276 GLU 276 276 276 GLU GLU Z . n A 1 277 PRO 277 277 277 PRO PRO Z . n A 1 278 TYR 278 278 278 TYR TYR Z . n A 1 279 ASP 279 279 279 ASP ASP Z . n A 1 280 ILE 280 280 280 ILE ILE Z . n A 1 281 GLU 281 281 281 GLU GLU Z . n A 1 282 GLY 282 282 282 GLY GLY Z . n A 1 283 GLY 283 283 283 GLY GLY Z . n A 1 284 HIS 284 284 284 HIS HIS Z . n A 1 285 VAL 285 285 285 VAL VAL Z . n A 1 286 PHE 286 286 286 PHE PHE Z . n A 1 287 PHE 287 287 287 PHE PHE Z . n A 1 288 GLU 288 288 288 GLU GLU Z . n A 1 289 ILE 289 289 289 ILE ILE Z . n A 1 290 ASP 290 290 290 ASP ASP Z . n A 1 291 THR 291 291 291 THR THR Z . n A 1 292 LYS 292 292 292 LYS LYS Z . n A 1 293 PHE 293 293 293 PHE PHE Z . n A 1 294 GLY 294 294 294 GLY GLY Z . n A 1 295 SER 295 295 295 SER SER Z . n A 1 296 VAL 296 296 296 VAL VAL Z . n A 1 297 LYS 297 297 297 LYS LYS Z . n A 1 298 CYS 298 298 298 CYS CYS Z . n A 1 299 ALA 299 299 299 ALA ALA Z . n A 1 300 ALA 300 300 300 ALA ALA Z . n A 1 301 PHE 301 301 301 PHE PHE Z . n A 1 302 GLU 302 302 302 GLU GLU Z . n A 1 303 PRO 303 303 303 PRO PRO Z . n A 1 304 THR 304 304 304 THR THR Z . n A 1 305 LYS 305 305 305 LYS LYS Z . n A 1 306 GLN 306 306 306 GLN GLN Z . n A 1 307 PHE 307 307 307 PHE PHE Z . n A 1 308 ARG 308 308 308 ARG ARG Z . n A 1 309 ASN 309 309 309 ASN ASN Z . n A 1 310 VAL 310 310 310 VAL VAL Z . n A 1 311 ILE 311 311 311 ILE ILE Z . n A 1 312 ARG 312 312 312 ARG ARG Z . n A 1 313 LEU 313 313 313 LEU LEU Z . n A 1 314 LEU 314 314 314 LEU LEU Z . n A 1 315 ARG 315 315 315 ARG ALA Z . n A 1 316 LYS 316 316 316 LYS LYS Z . n A 1 317 GLY 317 317 317 GLY GLY Z . n A 1 318 ASP 318 318 318 ASP ASP Z . n A 1 319 VAL 319 319 319 VAL VAL Z . n A 1 320 VAL 320 320 320 VAL VAL Z . n A 1 321 GLU 321 321 321 GLU GLU Z . n A 1 322 VAL 322 322 322 VAL VAL Z . n A 1 323 TYR 323 323 323 TYR TYR Z . n A 1 324 GLY 324 324 324 GLY GLY Z . n A 1 325 SER 325 325 325 SER SER Z . n A 1 326 MET 326 326 326 MET MET Z . n A 1 327 LYS 327 327 327 LYS LYS Z . n A 1 328 LYS 328 328 328 LYS LYS Z . n A 1 329 ASP 329 329 329 ASP ASP Z . n A 1 330 THR 330 330 330 THR THR Z . n A 1 331 ILE 331 331 331 ILE ILE Z . n A 1 332 ASN 332 332 332 ASN ASN Z . n A 1 333 LEU 333 333 333 LEU LEU Z . n A 1 334 GLU 334 334 334 GLU GLU Z . n A 1 335 LYS 335 335 335 LYS LYS Z . n A 1 336 ILE 336 336 336 ILE ILE Z . n A 1 337 GLN 337 337 337 GLN GLN Z . n A 1 338 ILE 338 338 338 ILE ILE Z . n A 1 339 VAL 339 339 339 VAL VAL Z . n A 1 340 GLU 340 340 340 GLU GLU Z . n A 1 341 LEU 341 341 341 LEU LEU Z . n A 1 342 ALA 342 342 342 ALA ALA Z . n A 1 343 GLU 343 343 343 GLU GLU Z . n A 1 344 ILE 344 344 344 ILE ILE Z . n A 1 345 TRP 345 345 345 TRP TRP Z . n A 1 346 VAL 346 346 346 VAL VAL Z . n A 1 347 GLU 347 347 347 GLU GLU Z . n A 1 348 LYS 348 348 348 LYS LYS Z . n A 1 349 ASN 349 349 349 ASN ASN Z . n A 1 350 PRO 350 350 350 PRO PRO Z . n A 1 351 ILE 351 351 351 ILE ILE Z . n A 1 352 CYS 352 352 352 CYS CYS Z . n A 1 353 PRO 353 353 353 PRO PRO Z . n A 1 354 SER 354 354 354 SER SER Z . n A 1 355 CYS 355 355 355 CYS CYS Z . n A 1 356 GLY 356 356 356 GLY GLY Z . n A 1 357 ARG 357 357 357 ARG ARG Z . n A 1 358 ARG 358 358 358 ARG ARG Z . n A 1 359 MET 359 359 359 MET MET Z . n A 1 360 GLU 360 360 360 GLU GLU Z . n A 1 361 SER 361 361 361 SER SER Z . n A 1 362 ALA 362 362 362 ALA ALA Z . n A 1 363 GLY 363 363 363 GLY GLY Z . n A 1 364 ARG 364 364 364 ARG ARG Z . n A 1 365 GLY 365 365 365 GLY GLY Z . n A 1 366 GLN 366 366 366 GLN GLN Z . n A 1 367 GLY 367 367 367 GLY GLY Z . n A 1 368 PHE 368 368 368 PHE PHE Z . n A 1 369 ARG 369 369 369 ARG ALA Z . n A 1 370 CYS 370 370 370 CYS CYS Z . n A 1 371 LYS 371 371 371 LYS ALA Z . n A 1 372 LYS 372 372 372 LYS LYS Z . n A 1 373 CYS 373 373 373 CYS CYS Z . n A 1 374 ARG 374 374 374 ARG ALA Z . n A 1 375 THR 375 375 375 THR THR Z . n A 1 376 LYS 376 376 376 LYS LYS Z . n A 1 377 ALA 377 377 377 ALA ALA Z . n A 1 378 ASP 378 378 378 ASP ASP Z . n A 1 379 GLU 379 379 379 GLU GLU Z . n A 1 380 LYS 380 380 380 LYS LYS Z . n A 1 381 LEU 381 381 381 LEU LEU Z . n A 1 382 ARG 382 382 382 ARG ARG Z . n A 1 383 GLU 383 383 383 GLU GLU Z . n A 1 384 LYS 384 384 384 LYS LYS Z . n A 1 385 VAL 385 385 385 VAL VAL Z . n A 1 386 GLU 386 386 386 GLU GLU Z . n A 1 387 ARG 387 387 387 ARG ALA Z . n A 1 388 GLU 388 388 388 GLU GLU Z . n A 1 389 LEU 389 389 389 LEU LEU Z . n A 1 390 GLN 390 390 390 GLN GLN Z . n A 1 391 PRO 391 391 391 PRO PRO Z . n A 1 392 GLY 392 392 392 GLY GLY Z . n A 1 393 PHE 393 393 393 PHE PHE Z . n A 1 394 TYR 394 394 394 TYR TYR Z . n A 1 395 GLU 395 395 395 GLU GLU Z . n A 1 396 VAL 396 396 396 VAL VAL Z . n A 1 397 PRO 397 397 397 PRO PRO Z . n A 1 398 PRO 398 398 398 PRO PRO Z . n A 1 399 SER 399 399 399 SER SER Z . n A 1 400 ALA 400 400 400 ALA ALA Z . n A 1 401 ARG 401 401 401 ARG ARG Z . n A 1 402 ARG 402 402 402 ARG ARG Z . n A 1 403 HIS 403 403 403 HIS HIS Z . n A 1 404 LEU 404 404 404 LEU LEU Z . n A 1 405 SER 405 405 405 SER SER Z . n A 1 406 LYS 406 406 406 LYS LYS Z . n A 1 407 PRO 407 407 407 PRO PRO Z . n A 1 408 LEU 408 408 408 LEU LEU Z . n A 1 409 ILE 409 409 409 ILE ILE Z . n A 1 410 ARG 410 410 410 ARG ARG Z . n A 1 411 MET 411 411 411 MET MET Z . n A 1 412 ASN 412 412 412 ASN ASN Z . n A 1 413 VAL 413 413 413 VAL VAL Z . n A 1 414 GLU 414 414 414 GLU ALA Z . n A 1 415 GLY 415 415 415 GLY GLY Z . n A 1 416 ARG 416 416 416 ARG ARG Z . n A 1 417 HIS 417 417 417 HIS HIS Z . n A 1 418 ILE 418 418 418 ILE ILE Z . n A 1 419 PHE 419 419 419 PHE PHE Z . n A 1 420 ARG 420 420 420 ARG ARG Z . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 501 1 ZN ZN Z . C 3 MG 1 502 1 MG MG Z . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id TPO _pdbx_struct_mod_residue.label_seq_id 18 _pdbx_struct_mod_residue.auth_asym_id Z _pdbx_struct_mod_residue.auth_comp_id TPO _pdbx_struct_mod_residue.auth_seq_id 18 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id THR _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 100 ? 1 MORE -9 ? 1 'SSA (A^2)' 19770 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 8 ? Z ASP 8 ? 1_555 MG ? C MG . ? Z MG 502 ? 1_555 O3P ? A TPO 18 ? Z TPO 18 ? 1_555 71.2 ? 2 SG ? A CYS 352 ? Z CYS 352 ? 1_555 ZN ? B ZN . ? Z ZN 501 ? 1_555 SG ? A CYS 355 ? Z CYS 355 ? 1_555 113.4 ? 3 SG ? A CYS 352 ? Z CYS 352 ? 1_555 ZN ? B ZN . ? Z ZN 501 ? 1_555 SG ? A CYS 370 ? Z CYS 370 ? 1_555 95.2 ? 4 SG ? A CYS 355 ? Z CYS 355 ? 1_555 ZN ? B ZN . ? Z ZN 501 ? 1_555 SG ? A CYS 370 ? Z CYS 370 ? 1_555 121.0 ? 5 SG ? A CYS 352 ? Z CYS 352 ? 1_555 ZN ? B ZN . ? Z ZN 501 ? 1_555 SG ? A CYS 373 ? Z CYS 373 ? 1_555 105.5 ? 6 SG ? A CYS 355 ? Z CYS 355 ? 1_555 ZN ? B ZN . ? Z ZN 501 ? 1_555 SG ? A CYS 373 ? Z CYS 373 ? 1_555 120.3 ? 7 SG ? A CYS 370 ? Z CYS 370 ? 1_555 ZN ? B ZN . ? Z ZN 501 ? 1_555 SG ? A CYS 373 ? Z CYS 373 ? 1_555 97.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-08-29 2 'Structure model' 1 1 2018-10-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.7.0032 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 Z _pdbx_validate_close_contact.auth_comp_id_1 VAL _pdbx_validate_close_contact.auth_seq_id_1 396 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NH2 _pdbx_validate_close_contact.auth_asym_id_2 Z _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 401 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.03 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP Z 9 ? ? 71.42 52.07 2 1 SER Z 13 ? ? -66.99 45.26 3 1 ARG Z 14 ? ? 172.70 82.53 4 1 TPO Z 18 ? ? 17.86 -74.67 5 1 ASN Z 56 ? ? -109.82 79.49 6 1 LYS Z 89 ? ? -103.99 59.03 7 1 LYS Z 137 ? ? -136.33 -116.94 8 1 GLU Z 167 ? ? -34.23 -36.10 9 1 PRO Z 209 ? ? -69.79 27.07 10 1 ASP Z 237 ? ? -85.32 -89.88 11 1 THR Z 274 ? ? -107.42 -80.23 12 1 GLU Z 281 ? ? 1.15 -50.23 13 1 LYS Z 305 ? ? 56.67 -117.95 14 1 LEU Z 313 ? ? -66.97 -73.67 15 1 LEU Z 314 ? ? -29.84 149.86 16 1 LYS Z 316 ? ? -37.06 137.89 17 1 VAL Z 339 ? ? -86.16 -81.08 18 1 SER Z 354 ? ? -79.33 -73.24 19 1 ASN Z 412 ? ? -98.70 53.28 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 CYS _pdbx_validate_peptide_omega.auth_asym_id_1 Z _pdbx_validate_peptide_omega.auth_seq_id_1 17 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 TPO _pdbx_validate_peptide_omega.auth_asym_id_2 Z _pdbx_validate_peptide_omega.auth_seq_id_2 18 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 142.85 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 Z ARG 14 ? CG ? A ARG 14 CG 2 1 Y 1 Z ARG 14 ? CD ? A ARG 14 CD 3 1 Y 1 Z ARG 14 ? NE ? A ARG 14 NE 4 1 Y 1 Z ARG 14 ? CZ ? A ARG 14 CZ 5 1 Y 1 Z ARG 14 ? NH1 ? A ARG 14 NH1 6 1 Y 1 Z ARG 14 ? NH2 ? A ARG 14 NH2 7 1 Y 1 Z LYS 35 ? CG ? A LYS 35 CG 8 1 Y 1 Z LYS 35 ? CD ? A LYS 35 CD 9 1 Y 1 Z LYS 35 ? CE ? A LYS 35 CE 10 1 Y 1 Z LYS 35 ? NZ ? A LYS 35 NZ 11 1 Y 1 Z ARG 54 ? CG ? A ARG 54 CG 12 1 Y 1 Z ARG 54 ? CD ? A ARG 54 CD 13 1 Y 1 Z ARG 54 ? NE ? A ARG 54 NE 14 1 Y 1 Z ARG 54 ? CZ ? A ARG 54 CZ 15 1 Y 1 Z ARG 54 ? NH1 ? A ARG 54 NH1 16 1 Y 1 Z ARG 54 ? NH2 ? A ARG 54 NH2 17 1 Y 1 Z ASP 98 ? CG ? A ASP 98 CG 18 1 Y 1 Z ASP 98 ? OD1 ? A ASP 98 OD1 19 1 Y 1 Z ASP 98 ? OD2 ? A ASP 98 OD2 20 1 Y 1 Z ARG 140 ? CG ? A ARG 140 CG 21 1 Y 1 Z ARG 140 ? CD ? A ARG 140 CD 22 1 Y 1 Z ARG 140 ? NE ? A ARG 140 NE 23 1 Y 1 Z ARG 140 ? CZ ? A ARG 140 CZ 24 1 Y 1 Z ARG 140 ? NH1 ? A ARG 140 NH1 25 1 Y 1 Z ARG 140 ? NH2 ? A ARG 140 NH2 26 1 Y 1 Z GLU 174 ? CG ? A GLU 174 CG 27 1 Y 1 Z GLU 174 ? CD ? A GLU 174 CD 28 1 Y 1 Z GLU 174 ? OE1 ? A GLU 174 OE1 29 1 Y 1 Z GLU 174 ? OE2 ? A GLU 174 OE2 30 1 Y 1 Z TYR 185 ? CG ? A TYR 185 CG 31 1 Y 1 Z TYR 185 ? CD1 ? A TYR 185 CD1 32 1 Y 1 Z TYR 185 ? CD2 ? A TYR 185 CD2 33 1 Y 1 Z TYR 185 ? CE1 ? A TYR 185 CE1 34 1 Y 1 Z TYR 185 ? CE2 ? A TYR 185 CE2 35 1 Y 1 Z TYR 185 ? CZ ? A TYR 185 CZ 36 1 Y 1 Z TYR 185 ? OH ? A TYR 185 OH 37 1 Y 1 Z GLU 229 ? CG ? A GLU 229 CG 38 1 Y 1 Z GLU 229 ? CD ? A GLU 229 CD 39 1 Y 1 Z GLU 229 ? OE1 ? A GLU 229 OE1 40 1 Y 1 Z GLU 229 ? OE2 ? A GLU 229 OE2 41 1 Y 1 Z ARG 260 ? CG ? A ARG 260 CG 42 1 Y 1 Z ARG 260 ? CD ? A ARG 260 CD 43 1 Y 1 Z ARG 260 ? NE ? A ARG 260 NE 44 1 Y 1 Z ARG 260 ? CZ ? A ARG 260 CZ 45 1 Y 1 Z ARG 260 ? NH1 ? A ARG 260 NH1 46 1 Y 1 Z ARG 260 ? NH2 ? A ARG 260 NH2 47 1 Y 1 Z ARG 270 ? CG ? A ARG 270 CG 48 1 Y 1 Z ARG 270 ? CD ? A ARG 270 CD 49 1 Y 1 Z ARG 270 ? NE ? A ARG 270 NE 50 1 Y 1 Z ARG 270 ? CZ ? A ARG 270 CZ 51 1 Y 1 Z ARG 270 ? NH1 ? A ARG 270 NH1 52 1 Y 1 Z ARG 270 ? NH2 ? A ARG 270 NH2 53 1 Y 1 Z ARG 315 ? CG ? A ARG 315 CG 54 1 Y 1 Z ARG 315 ? CD ? A ARG 315 CD 55 1 Y 1 Z ARG 315 ? NE ? A ARG 315 NE 56 1 Y 1 Z ARG 315 ? CZ ? A ARG 315 CZ 57 1 Y 1 Z ARG 315 ? NH1 ? A ARG 315 NH1 58 1 Y 1 Z ARG 315 ? NH2 ? A ARG 315 NH2 59 1 Y 1 Z ARG 369 ? CG ? A ARG 369 CG 60 1 Y 1 Z ARG 369 ? CD ? A ARG 369 CD 61 1 Y 1 Z ARG 369 ? NE ? A ARG 369 NE 62 1 Y 1 Z ARG 369 ? CZ ? A ARG 369 CZ 63 1 Y 1 Z ARG 369 ? NH1 ? A ARG 369 NH1 64 1 Y 1 Z ARG 369 ? NH2 ? A ARG 369 NH2 65 1 Y 1 Z LYS 371 ? CG ? A LYS 371 CG 66 1 Y 1 Z LYS 371 ? CD ? A LYS 371 CD 67 1 Y 1 Z LYS 371 ? CE ? A LYS 371 CE 68 1 Y 1 Z LYS 371 ? NZ ? A LYS 371 NZ 69 1 Y 1 Z ARG 374 ? CG ? A ARG 374 CG 70 1 Y 1 Z ARG 374 ? CD ? A ARG 374 CD 71 1 Y 1 Z ARG 374 ? NE ? A ARG 374 NE 72 1 Y 1 Z ARG 374 ? CZ ? A ARG 374 CZ 73 1 Y 1 Z ARG 374 ? NH1 ? A ARG 374 NH1 74 1 Y 1 Z ARG 374 ? NH2 ? A ARG 374 NH2 75 1 Y 1 Z ARG 387 ? CG ? A ARG 387 CG 76 1 Y 1 Z ARG 387 ? CD ? A ARG 387 CD 77 1 Y 1 Z ARG 387 ? NE ? A ARG 387 NE 78 1 Y 1 Z ARG 387 ? CZ ? A ARG 387 CZ 79 1 Y 1 Z ARG 387 ? NH1 ? A ARG 387 NH1 80 1 Y 1 Z ARG 387 ? NH2 ? A ARG 387 NH2 81 1 Y 1 Z GLU 414 ? CG ? A GLU 414 CG 82 1 Y 1 Z GLU 414 ? CD ? A GLU 414 CD 83 1 Y 1 Z GLU 414 ? OE1 ? A GLU 414 OE1 84 1 Y 1 Z GLU 414 ? OE2 ? A GLU 414 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 Z TYR 51 ? A TYR 51 2 1 Y 1 Z LYS 52 ? A LYS 52 3 1 Y 1 Z THR 53 ? A THR 53 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'MAGNESIUM ION' MG # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #