HEADER ANTIMICROBIAL PROTEIN 29-MAY-17 5XOK TITLE THANATIN Y10M21AA IN COMPLEX WITH LPS COMPND MOL_ID: 1; COMPND 2 MOLECULE: THANATIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: PODISUS MACULIVENTRIS; SOURCE 4 ORGANISM_COMMON: SPINED SOLDIER BUG; SOURCE 5 ORGANISM_TAXID: 29025 KEYWDS ANTIMICROBIAL PEPTIDE, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.SINHA,S.BHATTACHARJYA REVDAT 3 13-NOV-24 5XOK 1 REMARK REVDAT 2 14-JUN-23 5XOK 1 REMARK REVDAT 1 04-JUL-18 5XOK 0 JRNL AUTH S.SINHA,S.BHATTACHARJYA JRNL TITL THANATIN Y10M21AA IN COMPLEX WITH LPS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XOK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1300003911. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 400 UM THANATIN Y10M21AA, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TR-NOESY; 2D TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, SPARKY REMARK 210 METHOD USED : NA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -47.23 -138.65 REMARK 500 1 LYS A 4 79.31 -115.54 REMARK 500 1 ARG A 14 -77.03 -130.64 REMARK 500 1 THR A 15 10.84 -145.11 REMARK 500 1 SER B 34 -59.86 -136.69 REMARK 500 1 LYS B 36 79.10 -114.03 REMARK 500 1 ARG B 46 -77.39 -131.52 REMARK 500 2 SER A 2 -67.79 -99.85 REMARK 500 2 LYS A 4 79.30 -114.67 REMARK 500 2 ARG A 14 -77.57 -131.65 REMARK 500 2 THR A 15 10.47 -144.74 REMARK 500 2 LYS B 36 79.32 -111.85 REMARK 500 2 ARG B 46 -80.64 -131.68 REMARK 500 3 SER A 2 -69.16 -105.57 REMARK 500 3 LYS A 4 79.29 -113.88 REMARK 500 3 ARG A 14 -78.79 -132.59 REMARK 500 3 THR A 15 13.06 -148.14 REMARK 500 3 SER B 34 -61.56 -137.71 REMARK 500 3 LYS B 36 79.37 -112.60 REMARK 500 3 ARG B 46 -78.02 -131.09 REMARK 500 3 GLN B 51 -161.01 -176.13 REMARK 500 4 SER A 2 -58.28 -124.68 REMARK 500 4 LYS A 4 79.29 -111.87 REMARK 500 4 ARG A 14 -78.06 -131.35 REMARK 500 4 THR A 15 10.04 -144.66 REMARK 500 4 GLN A 19 -166.20 -164.25 REMARK 500 4 LYS B 36 79.24 -112.86 REMARK 500 4 ARG B 46 -44.71 -130.59 REMARK 500 4 THR B 47 -24.55 -176.30 REMARK 500 5 SER A 2 -49.34 -136.31 REMARK 500 5 LYS A 4 79.64 -114.83 REMARK 500 5 ARG A 14 -78.08 -131.71 REMARK 500 5 GLN A 19 -178.65 -172.23 REMARK 500 5 LYS B 36 79.29 -116.59 REMARK 500 5 ARG B 46 -78.77 -131.54 REMARK 500 5 GLN B 51 -158.36 -175.62 REMARK 500 6 ARG A 14 -78.12 -131.53 REMARK 500 6 GLN A 19 -161.35 -176.11 REMARK 500 6 SER B 34 -63.58 -122.36 REMARK 500 6 ARG B 46 -45.09 -130.58 REMARK 500 6 THR B 47 -26.48 -176.22 REMARK 500 6 GLN B 51 -160.44 -174.17 REMARK 500 7 ARG A 14 -78.58 -130.87 REMARK 500 7 THR A 15 10.22 -145.06 REMARK 500 7 GLN A 19 -163.26 -174.47 REMARK 500 7 SER B 34 -60.02 -123.35 REMARK 500 7 ARG B 46 -78.91 -131.26 REMARK 500 7 GLN B 51 -159.17 -175.97 REMARK 500 8 LYS A 4 79.02 -112.95 REMARK 500 8 ARG A 14 -80.31 -130.20 REMARK 500 REMARK 500 THIS ENTRY HAS 124 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36093 RELATED DB: BMRB REMARK 900 THANATIN Y10M21AA IN COMPLEX WITH LPS DBREF 5XOK A 1 21 UNP P55788 THAN_PODMA 1 21 DBREF 5XOK B 33 53 UNP P55788 THAN_PODMA 1 21 SEQADV 5XOK ALA A 10 UNP P55788 TYR 10 ENGINEERED MUTATION SEQADV 5XOK ALA A 21 UNP P55788 MET 21 ENGINEERED MUTATION SEQADV 5XOK ALA B 42 UNP P55788 TYR 10 ENGINEERED MUTATION SEQADV 5XOK ALA B 53 UNP P55788 MET 21 ENGINEERED MUTATION SEQRES 1 A 21 GLY SER LYS LYS PRO VAL PRO ILE ILE ALA CYS ASN ARG SEQRES 2 A 21 ARG THR GLY LYS CYS GLN ARG ALA SEQRES 1 B 21 GLY SER LYS LYS PRO VAL PRO ILE ILE ALA CYS ASN ARG SEQRES 2 B 21 ARG THR GLY LYS CYS GLN ARG ALA SHEET 1 AA1 2 ILE A 9 ASN A 12 0 SHEET 2 AA1 2 LYS A 17 ARG A 20 -1 O GLN A 19 N ALA A 10 SHEET 1 AA2 2 ILE B 41 ASN B 44 0 SHEET 2 AA2 2 LYS B 49 ARG B 52 -1 O GLN B 51 N ALA B 42 SSBOND 1 CYS A 11 CYS A 18 1555 1555 1.96 SSBOND 2 CYS B 43 CYS B 50 1555 1555 1.92 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1