HEADER PROTEIN BINDING 26-JUN-17 5XV1 TITLE CRYSTAL STRUCTURE OF ATG101-ATG13HORMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUTOPHAGY-RELATED PROTEIN 13; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 1-190; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: AUTOPHAGY-RELATED PROTEIN 101; COMPND 8 CHAIN: B, D; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ATG13, KIAA0652; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: ATG101, C12ORF44, PP894; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AUTOPHAGY, ATG101, ATG13, HORMA, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.-W.KIM,H.K.SONG REVDAT 3 22-NOV-23 5XV1 1 REMARK REVDAT 2 24-JUL-19 5XV1 1 JRNL REVDAT 1 04-JUL-18 5XV1 0 JRNL AUTH B.-W.KIM,H.K.SONG JRNL TITL CRYSTAL STRUCTURE OF ATG101-ATG13HORMA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 36673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.450 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.9873 - 6.0342 1.00 2544 147 0.1773 0.2138 REMARK 3 2 6.0342 - 4.7942 1.00 2501 144 0.1917 0.2212 REMARK 3 3 4.7942 - 4.1896 1.00 2515 145 0.1725 0.2091 REMARK 3 4 4.1896 - 3.8071 1.00 2498 145 0.1919 0.2201 REMARK 3 5 3.8071 - 3.5346 1.00 2496 143 0.2075 0.2432 REMARK 3 6 3.5346 - 3.3264 1.00 2481 143 0.2341 0.2999 REMARK 3 7 3.3264 - 3.1599 1.00 2492 144 0.2444 0.2603 REMARK 3 8 3.1599 - 3.0225 1.00 2507 144 0.2445 0.3116 REMARK 3 9 3.0225 - 2.9062 1.00 2480 142 0.2498 0.3287 REMARK 3 10 2.9062 - 2.8060 1.00 2493 143 0.2660 0.3070 REMARK 3 11 2.8060 - 2.7183 1.00 2479 143 0.2743 0.3535 REMARK 3 12 2.7183 - 2.6406 1.00 2472 143 0.2749 0.3224 REMARK 3 13 2.6406 - 2.5711 1.00 2484 144 0.2731 0.3586 REMARK 3 14 2.5711 - 2.5084 0.89 2233 128 0.2934 0.3085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6165 REMARK 3 ANGLE : 0.926 8356 REMARK 3 CHIRALITY : 0.051 982 REMARK 3 PLANARITY : 0.005 1060 REMARK 3 DIHEDRAL : 15.582 3696 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 33 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.7175 6.9903 225.1096 REMARK 3 T TENSOR REMARK 3 T11: 0.5770 T22: 0.4631 REMARK 3 T33: 0.4678 T12: -0.0366 REMARK 3 T13: 0.0738 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 2.8666 L22: 4.2302 REMARK 3 L33: 5.7917 L12: 0.5768 REMARK 3 L13: 0.8012 L23: -0.3349 REMARK 3 S TENSOR REMARK 3 S11: -0.0377 S12: -0.0030 S13: 0.3367 REMARK 3 S21: -0.9352 S22: -0.3085 S23: -0.0612 REMARK 3 S31: 0.7526 S32: -0.0630 S33: 0.3862 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7018 -4.0639 217.8115 REMARK 3 T TENSOR REMARK 3 T11: 1.7186 T22: 0.6827 REMARK 3 T33: 0.4577 T12: -0.1449 REMARK 3 T13: 0.1334 T23: -0.0622 REMARK 3 L TENSOR REMARK 3 L11: 3.6732 L22: 4.3236 REMARK 3 L33: 5.3722 L12: 2.8197 REMARK 3 L13: -0.1488 L23: -0.2881 REMARK 3 S TENSOR REMARK 3 S11: 0.0798 S12: 0.9523 S13: -0.6169 REMARK 3 S21: -1.6044 S22: 0.2917 S23: 0.9827 REMARK 3 S31: 2.7664 S32: -0.0093 S33: 0.3541 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1444 -12.4500 230.7605 REMARK 3 T TENSOR REMARK 3 T11: 1.6451 T22: 0.6794 REMARK 3 T33: 0.7583 T12: -0.1918 REMARK 3 T13: 0.0158 T23: -0.0449 REMARK 3 L TENSOR REMARK 3 L11: 1.6410 L22: 1.5224 REMARK 3 L33: 2.3122 L12: 0.7023 REMARK 3 L13: -1.2445 L23: 0.5965 REMARK 3 S TENSOR REMARK 3 S11: -0.1349 S12: 0.2903 S13: -0.3738 REMARK 3 S21: -0.5733 S22: -0.1322 S23: 0.2558 REMARK 3 S31: 2.1328 S32: -0.3306 S33: 0.3595 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.2543 8.4791 225.1440 REMARK 3 T TENSOR REMARK 3 T11: 1.0513 T22: 1.3679 REMARK 3 T33: 1.3535 T12: -0.2324 REMARK 3 T13: -0.3013 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 1.6350 L22: 1.8670 REMARK 3 L33: 1.8599 L12: 0.1853 REMARK 3 L13: -0.0665 L23: 0.4353 REMARK 3 S TENSOR REMARK 3 S11: -0.3475 S12: -0.8407 S13: -1.4007 REMARK 3 S21: 0.1646 S22: 0.4667 S23: 0.6101 REMARK 3 S31: 1.4381 S32: -1.5653 S33: -0.4044 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.0927 1.7169 235.3116 REMARK 3 T TENSOR REMARK 3 T11: 0.4758 T22: 0.4596 REMARK 3 T33: 0.5189 T12: -0.1262 REMARK 3 T13: 0.0645 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.3727 L22: 2.6909 REMARK 3 L33: 5.1762 L12: 0.5880 REMARK 3 L13: -1.7735 L23: 1.6368 REMARK 3 S TENSOR REMARK 3 S11: -0.0235 S12: -0.2603 S13: -0.0317 REMARK 3 S21: -0.1005 S22: -0.2624 S23: 0.2274 REMARK 3 S31: 1.0174 S32: -0.0070 S33: 0.4172 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5089 -13.8137 229.5066 REMARK 3 T TENSOR REMARK 3 T11: 2.0466 T22: 0.6198 REMARK 3 T33: 0.8055 T12: -0.2945 REMARK 3 T13: -0.1420 T23: -0.0943 REMARK 3 L TENSOR REMARK 3 L11: 1.6414 L22: 2.3003 REMARK 3 L33: 5.7134 L12: 0.5662 REMARK 3 L13: -0.6906 L23: -0.6733 REMARK 3 S TENSOR REMARK 3 S11: 0.2281 S12: -0.7598 S13: -1.2601 REMARK 3 S21: -1.3271 S22: 0.0531 S23: 0.8571 REMARK 3 S31: 2.6049 S32: -0.2860 S33: -0.2601 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.2822 -1.6276 233.2277 REMARK 3 T TENSOR REMARK 3 T11: 1.1101 T22: 0.9955 REMARK 3 T33: 0.7943 T12: -0.5276 REMARK 3 T13: 0.0037 T23: -0.0576 REMARK 3 L TENSOR REMARK 3 L11: 2.1818 L22: 3.6253 REMARK 3 L33: 0.5356 L12: -1.0922 REMARK 3 L13: -0.3952 L23: 1.1539 REMARK 3 S TENSOR REMARK 3 S11: 0.1702 S12: -0.7437 S13: -0.6248 REMARK 3 S21: 0.0258 S22: 0.3252 S23: 1.4292 REMARK 3 S31: 1.6122 S32: -1.5237 S33: -0.2133 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.8225 8.1083 252.1495 REMARK 3 T TENSOR REMARK 3 T11: 0.4479 T22: 0.5248 REMARK 3 T33: 0.4292 T12: -0.1150 REMARK 3 T13: 0.0359 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 1.8730 L22: 3.2818 REMARK 3 L33: 4.4808 L12: 0.5346 REMARK 3 L13: -1.2936 L23: -0.5727 REMARK 3 S TENSOR REMARK 3 S11: 0.0190 S12: -0.3794 S13: -0.3853 REMARK 3 S21: 0.4036 S22: 0.0415 S23: 0.2891 REMARK 3 S31: -0.3963 S32: -0.0635 S33: 0.0199 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 32 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3940 13.7431 238.3269 REMARK 3 T TENSOR REMARK 3 T11: 0.3751 T22: 0.5071 REMARK 3 T33: 0.4863 T12: -0.0594 REMARK 3 T13: -0.0619 T23: 0.0446 REMARK 3 L TENSOR REMARK 3 L11: 2.1061 L22: 2.3211 REMARK 3 L33: 3.0398 L12: 0.0229 REMARK 3 L13: -0.3417 L23: -2.2129 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: -0.1497 S13: -0.0611 REMARK 3 S21: 0.1687 S22: -0.3969 S23: -0.5110 REMARK 3 S31: -0.2294 S32: 0.5998 S33: 0.3602 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0753 14.6120 257.1480 REMARK 3 T TENSOR REMARK 3 T11: 0.9904 T22: 0.7398 REMARK 3 T33: 0.5946 T12: -0.2963 REMARK 3 T13: -0.1664 T23: 0.1860 REMARK 3 L TENSOR REMARK 3 L11: 3.5792 L22: 3.8813 REMARK 3 L33: 5.7689 L12: 0.1648 REMARK 3 L13: -0.6860 L23: -0.7444 REMARK 3 S TENSOR REMARK 3 S11: 0.0543 S12: -0.7801 S13: -0.5528 REMARK 3 S21: 1.3433 S22: -0.9319 S23: -0.8434 REMARK 3 S31: -1.2181 S32: 1.2046 S33: 0.3312 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.2670 18.2864 254.7368 REMARK 3 T TENSOR REMARK 3 T11: 1.0728 T22: 0.5890 REMARK 3 T33: 0.5225 T12: 0.0651 REMARK 3 T13: 0.0881 T23: -0.0402 REMARK 3 L TENSOR REMARK 3 L11: 3.4767 L22: 3.5009 REMARK 3 L33: 3.4363 L12: 1.2166 REMARK 3 L13: -1.0133 L23: -0.6221 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: -0.6445 S13: 0.0222 REMARK 3 S21: 0.7246 S22: 0.3570 S23: 0.5895 REMARK 3 S31: -0.7608 S32: -0.5716 S33: 0.0779 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.5534 40.7546 250.0433 REMARK 3 T TENSOR REMARK 3 T11: 2.0670 T22: 0.7471 REMARK 3 T33: 1.0498 T12: -0.0536 REMARK 3 T13: 0.0197 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 0.2449 L22: 4.4363 REMARK 3 L33: 2.9570 L12: 0.0250 REMARK 3 L13: 0.0938 L23: 3.5871 REMARK 3 S TENSOR REMARK 3 S11: 0.7280 S12: 0.7633 S13: 0.3332 REMARK 3 S21: 1.9681 S22: -1.3641 S23: 0.9019 REMARK 3 S31: -2.7408 S32: 0.2633 S33: 0.0709 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6624 11.0043 256.2978 REMARK 3 T TENSOR REMARK 3 T11: 0.7661 T22: 0.7082 REMARK 3 T33: 0.6135 T12: -0.0416 REMARK 3 T13: 0.1204 T23: -0.1091 REMARK 3 L TENSOR REMARK 3 L11: 1.4769 L22: 6.4209 REMARK 3 L33: 3.9622 L12: -1.0018 REMARK 3 L13: -0.8446 L23: -2.9206 REMARK 3 S TENSOR REMARK 3 S11: -0.2151 S12: -0.7476 S13: -0.1633 REMARK 3 S21: 1.4107 S22: 0.6812 S23: 0.6053 REMARK 3 S31: -0.9701 S32: -1.0125 S33: 0.1687 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 134 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.5409 -2.5980 251.8905 REMARK 3 T TENSOR REMARK 3 T11: 0.5039 T22: 0.5962 REMARK 3 T33: 0.6162 T12: -0.0947 REMARK 3 T13: 0.1887 T23: 0.0608 REMARK 3 L TENSOR REMARK 3 L11: 3.2506 L22: 5.2558 REMARK 3 L33: 7.6229 L12: -0.3568 REMARK 3 L13: 3.3527 L23: -1.4850 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: -0.7696 S13: -0.4850 REMARK 3 S21: -0.0295 S22: 0.1509 S23: 0.3352 REMARK 3 S31: 0.8636 S32: -0.7640 S33: -0.1332 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.0069 25.4200 237.4211 REMARK 3 T TENSOR REMARK 3 T11: 1.3113 T22: 0.7753 REMARK 3 T33: 0.8190 T12: 0.4150 REMARK 3 T13: 0.1689 T23: 0.0784 REMARK 3 L TENSOR REMARK 3 L11: 3.3407 L22: 5.9857 REMARK 3 L33: 4.6826 L12: 1.0030 REMARK 3 L13: -0.7029 L23: -2.1272 REMARK 3 S TENSOR REMARK 3 S11: 0.5263 S12: -0.7140 S13: 0.7240 REMARK 3 S21: 0.5845 S22: 0.3170 S23: 1.6510 REMARK 3 S31: -1.9474 S32: -1.3652 S33: -0.4876 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 177 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0988 22.9083 239.9697 REMARK 3 T TENSOR REMARK 3 T11: 0.7853 T22: 0.4775 REMARK 3 T33: 0.5648 T12: -0.1375 REMARK 3 T13: -0.0010 T23: -0.0447 REMARK 3 L TENSOR REMARK 3 L11: 2.8987 L22: 5.3697 REMARK 3 L33: 5.9831 L12: 1.0451 REMARK 3 L13: -0.7900 L23: -0.8319 REMARK 3 S TENSOR REMARK 3 S11: 0.4094 S12: 0.1584 S13: 0.1330 REMARK 3 S21: 0.6860 S22: -0.3744 S23: -0.6051 REMARK 3 S31: -0.9853 S32: 0.2717 S33: -0.5020 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 190 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7159 18.2264 257.4287 REMARK 3 T TENSOR REMARK 3 T11: 1.4654 T22: 0.6988 REMARK 3 T33: 0.4149 T12: -0.3249 REMARK 3 T13: 0.1048 T23: -0.0879 REMARK 3 L TENSOR REMARK 3 L11: 1.2306 L22: 1.1455 REMARK 3 L33: 6.1995 L12: 0.9323 REMARK 3 L13: -1.6431 L23: -2.3194 REMARK 3 S TENSOR REMARK 3 S11: 0.3857 S12: -0.2481 S13: 0.1123 REMARK 3 S21: 1.3418 S22: -0.0599 S23: 0.2064 REMARK 3 S31: -1.7122 S32: -0.4182 S33: -0.1107 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 197 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.1569 5.5091 271.1320 REMARK 3 T TENSOR REMARK 3 T11: 1.5567 T22: 0.9203 REMARK 3 T33: 1.1967 T12: 0.0650 REMARK 3 T13: 0.0635 T23: 0.1424 REMARK 3 L TENSOR REMARK 3 L11: 1.6469 L22: 8.3793 REMARK 3 L33: 2.6715 L12: 0.1606 REMARK 3 L13: -1.9469 L23: -1.4349 REMARK 3 S TENSOR REMARK 3 S11: 0.8210 S12: 0.2020 S13: 0.9735 REMARK 3 S21: -0.5605 S22: 0.0335 S23: 1.0577 REMARK 3 S31: -0.4853 S32: 0.7012 S33: -1.0534 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 205 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.6037 -7.0621 270.3741 REMARK 3 T TENSOR REMARK 3 T11: 2.3285 T22: 2.5184 REMARK 3 T33: 1.2556 T12: 0.3659 REMARK 3 T13: -0.5101 T23: -0.3837 REMARK 3 L TENSOR REMARK 3 L11: 2.0037 L22: 7.2789 REMARK 3 L33: 3.6716 L12: 1.2383 REMARK 3 L13: -4.2205 L23: 3.3947 REMARK 3 S TENSOR REMARK 3 S11: -0.1867 S12: 0.6333 S13: 1.7987 REMARK 3 S21: -0.0084 S22: -0.3823 S23: 1.3866 REMARK 3 S31: -3.2895 S32: -3.4590 S33: 1.2671 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 6 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5289 45.7953 221.4646 REMARK 3 T TENSOR REMARK 3 T11: 0.3011 T22: 0.4943 REMARK 3 T33: 0.5372 T12: 0.0493 REMARK 3 T13: 0.0260 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 2.9767 L22: 2.7326 REMARK 3 L33: 3.6017 L12: -0.7018 REMARK 3 L13: 0.8689 L23: 0.2750 REMARK 3 S TENSOR REMARK 3 S11: -0.1477 S12: -0.2982 S13: -0.7811 REMARK 3 S21: 0.1781 S22: -0.0400 S23: 0.3125 REMARK 3 S31: 0.1392 S32: -0.4041 S33: 0.0571 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 33 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7237 46.0654 216.2929 REMARK 3 T TENSOR REMARK 3 T11: 0.5026 T22: 0.7746 REMARK 3 T33: 0.6690 T12: -0.0958 REMARK 3 T13: -0.1298 T23: 0.1461 REMARK 3 L TENSOR REMARK 3 L11: 4.2793 L22: 1.5329 REMARK 3 L33: 4.4808 L12: -0.3094 REMARK 3 L13: -1.0338 L23: -2.3879 REMARK 3 S TENSOR REMARK 3 S11: 0.0720 S12: 0.3284 S13: 0.1481 REMARK 3 S21: 0.8587 S22: -0.3862 S23: -2.7213 REMARK 3 S31: -0.5962 S32: 1.0745 S33: 0.4499 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 43 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1759 39.9157 222.1283 REMARK 3 T TENSOR REMARK 3 T11: 0.6283 T22: 0.5062 REMARK 3 T33: 0.5225 T12: -0.0423 REMARK 3 T13: -0.0318 T23: 0.0724 REMARK 3 L TENSOR REMARK 3 L11: 1.3380 L22: 5.1998 REMARK 3 L33: 1.5713 L12: -1.1343 REMARK 3 L13: -1.3823 L23: 0.1075 REMARK 3 S TENSOR REMARK 3 S11: -0.3546 S12: -0.1102 S13: -0.5783 REMARK 3 S21: 1.6384 S22: -0.1732 S23: -0.7327 REMARK 3 S31: 0.2600 S32: 0.4151 S33: 0.4321 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 59 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.3612 60.0182 219.5227 REMARK 3 T TENSOR REMARK 3 T11: 0.6754 T22: 0.5232 REMARK 3 T33: 0.5294 T12: 0.0621 REMARK 3 T13: 0.0115 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 3.2321 L22: 3.6132 REMARK 3 L33: 5.0828 L12: -1.0869 REMARK 3 L13: -2.8628 L23: 0.2143 REMARK 3 S TENSOR REMARK 3 S11: 0.5216 S12: -0.2038 S13: 0.5141 REMARK 3 S21: 0.3741 S22: -0.0781 S23: 0.1429 REMARK 3 S31: -1.2393 S32: -0.1962 S33: -0.3064 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 104 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.7174 40.4640 213.4402 REMARK 3 T TENSOR REMARK 3 T11: 0.7317 T22: 1.1248 REMARK 3 T33: 1.4710 T12: -0.0258 REMARK 3 T13: -0.3126 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.0721 L22: 0.0613 REMARK 3 L33: 0.7397 L12: 0.0904 REMARK 3 L13: 0.1757 L23: 0.0939 REMARK 3 S TENSOR REMARK 3 S11: -0.2228 S12: -1.3809 S13: 0.0109 REMARK 3 S21: 0.1017 S22: 0.1350 S23: 0.5112 REMARK 3 S31: 0.2214 S32: -1.7639 S33: 0.3288 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 116 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.0218 43.8067 211.2992 REMARK 3 T TENSOR REMARK 3 T11: 0.2320 T22: 0.4707 REMARK 3 T33: 0.5386 T12: 0.0360 REMARK 3 T13: -0.1622 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 1.1278 L22: 2.3160 REMARK 3 L33: 2.5178 L12: 0.0657 REMARK 3 L13: -1.2957 L23: -1.1942 REMARK 3 S TENSOR REMARK 3 S11: -0.0875 S12: 0.3098 S13: 0.0134 REMARK 3 S21: -0.0388 S22: -0.0927 S23: 0.5046 REMARK 3 S31: 0.1447 S32: -0.1865 S33: 0.2388 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 134 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8520 62.4449 214.2544 REMARK 3 T TENSOR REMARK 3 T11: 0.8474 T22: 0.4800 REMARK 3 T33: 0.7818 T12: -0.1571 REMARK 3 T13: 0.0954 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 1.4963 L22: 4.2433 REMARK 3 L33: 6.4391 L12: -2.1395 REMARK 3 L13: -1.8694 L23: 0.0448 REMARK 3 S TENSOR REMARK 3 S11: 0.6654 S12: -0.2610 S13: 1.3330 REMARK 3 S21: 0.6457 S22: -0.2597 S23: -0.1137 REMARK 3 S31: -1.5669 S32: 0.5026 S33: -0.0309 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 158 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.0997 67.6677 208.9803 REMARK 3 T TENSOR REMARK 3 T11: 1.0441 T22: 0.6946 REMARK 3 T33: 1.3642 T12: 0.2696 REMARK 3 T13: 0.1479 T23: 0.1450 REMARK 3 L TENSOR REMARK 3 L11: 4.3059 L22: 2.4406 REMARK 3 L33: 0.3187 L12: 0.0763 REMARK 3 L13: 0.8698 L23: 0.3272 REMARK 3 S TENSOR REMARK 3 S11: 0.7124 S12: 0.1085 S13: 1.1699 REMARK 3 S21: -0.9797 S22: 0.1318 S23: 2.3574 REMARK 3 S31: -0.6599 S32: -1.2957 S33: -0.3387 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 169 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.7772 52.3354 208.5003 REMARK 3 T TENSOR REMARK 3 T11: 0.3909 T22: 0.8207 REMARK 3 T33: 0.7090 T12: 0.2237 REMARK 3 T13: -0.1091 T23: 0.1259 REMARK 3 L TENSOR REMARK 3 L11: 2.0432 L22: 2.7209 REMARK 3 L33: 1.5880 L12: -0.4292 REMARK 3 L13: 0.1718 L23: 1.9360 REMARK 3 S TENSOR REMARK 3 S11: -0.3030 S12: 1.1882 S13: 0.6726 REMARK 3 S21: -1.4782 S22: 0.3109 S23: 1.0489 REMARK 3 S31: 0.1777 S32: -0.8899 S33: -0.1947 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2774 39.9480 202.9386 REMARK 3 T TENSOR REMARK 3 T11: 0.3314 T22: 0.4705 REMARK 3 T33: 0.4023 T12: 0.1075 REMARK 3 T13: -0.0053 T23: 0.0803 REMARK 3 L TENSOR REMARK 3 L11: 1.6274 L22: 5.3254 REMARK 3 L33: 3.9184 L12: 0.1318 REMARK 3 L13: -1.3749 L23: -1.8603 REMARK 3 S TENSOR REMARK 3 S11: 0.1308 S12: 0.1383 S13: -0.0228 REMARK 3 S21: -0.6265 S22: -0.2795 S23: -0.0802 REMARK 3 S31: 0.3234 S32: 0.3139 S33: 0.1161 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 70 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4146 30.9623 192.4445 REMARK 3 T TENSOR REMARK 3 T11: 0.9935 T22: 0.6306 REMARK 3 T33: 0.5705 T12: 0.0841 REMARK 3 T13: 0.2737 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.8030 L22: 4.3862 REMARK 3 L33: 0.7381 L12: 0.2291 REMARK 3 L13: 1.1345 L23: 0.9503 REMARK 3 S TENSOR REMARK 3 S11: -0.1926 S12: 0.1449 S13: -0.0044 REMARK 3 S21: -1.0832 S22: -0.1827 S23: -0.3827 REMARK 3 S31: 0.4097 S32: 0.0948 S33: 0.4016 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 115 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4057 48.2228 193.3239 REMARK 3 T TENSOR REMARK 3 T11: 0.6275 T22: 0.5215 REMARK 3 T33: 0.4353 T12: 0.1441 REMARK 3 T13: -0.0667 T23: 0.0802 REMARK 3 L TENSOR REMARK 3 L11: 1.7334 L22: 6.0969 REMARK 3 L33: 4.5245 L12: 0.6440 REMARK 3 L13: -0.7247 L23: 1.4671 REMARK 3 S TENSOR REMARK 3 S11: 0.2409 S12: 0.4346 S13: 0.1488 REMARK 3 S21: -0.5958 S22: -0.1524 S23: -0.1455 REMARK 3 S31: -0.1508 S32: -0.1073 S33: -0.1098 REMARK 3 TLS GROUP : 32 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 162 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7959 28.3191 202.9545 REMARK 3 T TENSOR REMARK 3 T11: 0.8949 T22: 0.4824 REMARK 3 T33: 0.5957 T12: 0.0512 REMARK 3 T13: 0.0554 T23: -0.0624 REMARK 3 L TENSOR REMARK 3 L11: 2.4836 L22: 4.0765 REMARK 3 L33: 6.7596 L12: -0.3959 REMARK 3 L13: -2.2157 L23: -1.2515 REMARK 3 S TENSOR REMARK 3 S11: -0.1702 S12: 0.3023 S13: -0.2989 REMARK 3 S21: -0.7804 S22: -0.1733 S23: -0.0515 REMARK 3 S31: 1.3992 S32: -0.4278 S33: 0.3981 REMARK 3 TLS GROUP : 33 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 197 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5567 52.2451 172.6019 REMARK 3 T TENSOR REMARK 3 T11: 1.3639 T22: 1.1694 REMARK 3 T33: 1.1933 T12: 0.0240 REMARK 3 T13: 0.1400 T23: 0.1073 REMARK 3 L TENSOR REMARK 3 L11: 0.2935 L22: 1.4659 REMARK 3 L33: 1.1517 L12: 0.4296 REMARK 3 L13: 0.3751 L23: 1.2103 REMARK 3 S TENSOR REMARK 3 S11: -0.6879 S12: -0.6434 S13: 0.3217 REMARK 3 S21: 1.2406 S22: 0.4452 S23: 0.4737 REMARK 3 S31: 1.3568 S32: -0.9388 S33: 0.3499 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XV1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004221. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36707 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.508 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5XYU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES (PH7.5), 0.2M MGCL2, 6-8% REMARK 280 (W/V) PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.24150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.75250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.24150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 62.75250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 THR A 3 REMARK 465 ASP A 4 REMARK 465 LEU A 5 REMARK 465 LYS A 112 REMARK 465 VAL A 113 REMARK 465 GLY A 145 REMARK 465 HIS A 146 REMARK 465 ILE B 212 REMARK 465 LYS B 213 REMARK 465 ASP B 214 REMARK 465 THR B 215 REMARK 465 LEU B 216 REMARK 465 ALA B 217 REMARK 465 LEU B 218 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 THR C 3 REMARK 465 ASP C 4 REMARK 465 LEU C 5 REMARK 465 ALA D 217 REMARK 465 LEU D 218 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 40 CG CD NE CZ NH1 NH2 REMARK 470 SER A 44 OG REMARK 470 LEU A 86 CG CD1 CD2 REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 ASP A 92 CG OD1 OD2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 LYS A 109 CG CD CE NZ REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 SER A 114 OG REMARK 470 ARG A 139 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 TYR A 148 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 151 CG CD1 CD2 REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 MET B 1 CG SD CE REMARK 470 GLU B 18 CG CD OE1 OE2 REMARK 470 ARG B 74 CG CD NE CZ NH1 NH2 REMARK 470 SER B 90 OG REMARK 470 ASP B 93 CG OD1 OD2 REMARK 470 LEU B 95 CG CD1 CD2 REMARK 470 LYS B 107 CG CD CE NZ REMARK 470 ARG B 109 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 163 CG CD OE1 OE2 REMARK 470 SER B 203 OG REMARK 470 THR B 205 OG1 CG2 REMARK 470 ARG B 209 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 210 CG CD NE CZ NH1 NH2 REMARK 470 SER C 44 OG REMARK 470 LYS C 87 CG CD CE NZ REMARK 470 GLU C 90 CG CD OE1 OE2 REMARK 470 ASP C 92 CG OD1 OD2 REMARK 470 LYS C 106 CG CD CE NZ REMARK 470 LYS C 109 CG CD CE NZ REMARK 470 GLU C 110 CG CD OE1 OE2 REMARK 470 LYS C 112 CG CD CE NZ REMARK 470 VAL C 113 CG1 CG2 REMARK 470 SER C 114 OG REMARK 470 ARG C 139 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 151 CG CD1 CD2 REMARK 470 GLU C 158 CG CD OE1 OE2 REMARK 470 GLU C 166 CG CD OE1 OE2 REMARK 470 ARG C 190 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 18 CG CD OE1 OE2 REMARK 470 ARG D 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 107 CG CD CE NZ REMARK 470 ARG D 109 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 135 CG CD OE1 NE2 REMARK 470 LEU D 200 CG CD1 CD2 REMARK 470 SER D 203 OG REMARK 470 VAL D 204 CG1 CG2 REMARK 470 THR D 205 OG1 CG2 REMARK 470 MET D 208 CG SD CE REMARK 470 ARG D 209 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 210 CG CD NE CZ NH1 NH2 REMARK 470 ILE D 212 CG1 CG2 CD1 REMARK 470 LYS D 213 CG CD CE NZ REMARK 470 ASP D 214 CG OD1 OD2 REMARK 470 THR D 215 OG1 CG2 REMARK 470 LEU D 216 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG D 15 NH1 ARG D 137 1.51 REMARK 500 OD2 ASP A 57 O HOH A 201 1.86 REMARK 500 O VAL D 158 O HOH D 301 2.06 REMARK 500 O LEU A 53 O HOH A 202 2.07 REMARK 500 O THR A 135 O HOH A 203 2.10 REMARK 500 O ASP B 58 NH1 ARG B 141 2.12 REMARK 500 OD2 ASP B 179 O HOH B 301 2.13 REMARK 500 O VAL D 129 O HOH D 302 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 140 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG D 15 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG D 137 NH1 - CZ - NH2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG D 137 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 44 73.01 -108.05 REMARK 500 GLU A 158 76.48 56.59 REMARK 500 THR B 205 -73.75 -57.00 REMARK 500 SER C 44 75.02 -108.95 REMARK 500 SER C 114 67.93 -66.68 REMARK 500 TYR C 115 -19.21 93.89 REMARK 500 TYR C 148 175.82 179.19 REMARK 500 GLU C 158 70.86 52.85 REMARK 500 ASN D 2 -2.88 71.56 REMARK 500 ARG D 32 41.37 -109.67 REMARK 500 ALA D 132 -70.33 -98.81 REMARK 500 GLU D 163 -74.16 -68.80 REMARK 500 VAL D 204 26.05 -73.95 REMARK 500 THR D 205 0.02 -68.91 REMARK 500 REMARK 500 REMARK: NULL DBREF 5XV1 A 1 190 UNP O75143 ATG13_HUMAN 1 190 DBREF 5XV1 B 1 218 UNP Q9BSB4 ATGA1_HUMAN 1 218 DBREF 5XV1 C 1 190 UNP O75143 ATG13_HUMAN 1 190 DBREF 5XV1 D 1 218 UNP Q9BSB4 ATGA1_HUMAN 1 218 SEQADV 5XV1 ALA B 40 UNP Q9BSB4 LYS 40 ENGINEERED MUTATION SEQADV 5XV1 ALA B 41 UNP Q9BSB4 LYS 41 ENGINEERED MUTATION SEQADV 5XV1 ALA B 42 UNP Q9BSB4 GLU 42 ENGINEERED MUTATION SEQADV 5XV1 ALA D 40 UNP Q9BSB4 LYS 40 ENGINEERED MUTATION SEQADV 5XV1 ALA D 41 UNP Q9BSB4 LYS 41 ENGINEERED MUTATION SEQADV 5XV1 ALA D 42 UNP Q9BSB4 GLU 42 ENGINEERED MUTATION SEQRES 1 A 190 MET GLU THR ASP LEU ASN SER GLN ASP ARG LYS ASP LEU SEQRES 2 A 190 ASP LYS PHE ILE LYS PHE PHE ALA LEU LYS THR VAL GLN SEQRES 3 A 190 VAL ILE VAL GLN ALA ARG LEU GLY GLU LYS ILE CYS THR SEQRES 4 A 190 ARG SER SER SER SER PRO THR GLY SER ASP TRP PHE ASN SEQRES 5 A 190 LEU ALA ILE LYS ASP ILE PRO GLU VAL THR HIS GLU ALA SEQRES 6 A 190 LYS LYS ALA LEU ALA GLY GLN LEU PRO ALA VAL GLY ARG SEQRES 7 A 190 SER MET CYS VAL GLU ILE SER LEU LYS THR SER GLU GLY SEQRES 8 A 190 ASP SER MET GLU LEU GLU ILE TRP CYS LEU GLU MET ASN SEQRES 9 A 190 GLU LYS CYS ASP LYS GLU ILE LYS VAL SER TYR THR VAL SEQRES 10 A 190 TYR ASN ARG LEU SER LEU LEU LEU LYS SER LEU LEU ALA SEQRES 11 A 190 ILE THR ARG VAL THR PRO ALA TYR ARG LEU SER ARG LYS SEQRES 12 A 190 GLN GLY HIS GLU TYR VAL ILE LEU TYR ARG ILE TYR PHE SEQRES 13 A 190 GLY GLU VAL GLN LEU SER GLY LEU GLY GLU GLY PHE GLN SEQRES 14 A 190 THR VAL ARG VAL GLY THR VAL GLY THR PRO VAL GLY THR SEQRES 15 A 190 ILE THR LEU SER CYS ALA TYR ARG SEQRES 1 B 218 MET ASN CYS ARG SER GLU VAL LEU GLU VAL SER VAL GLU SEQRES 2 B 218 GLY ARG GLN VAL GLU GLU ALA MET LEU ALA VAL LEU HIS SEQRES 3 B 218 THR VAL LEU LEU HIS ARG SER THR GLY LYS PHE HIS TYR SEQRES 4 B 218 ALA ALA ALA GLY THR TYR SER ILE GLY THR VAL GLY THR SEQRES 5 B 218 GLN ASP VAL ASP CYS ASP PHE ILE ASP PHE THR TYR VAL SEQRES 6 B 218 ARG VAL SER SER GLU GLU LEU ASP ARG ALA LEU ARG LYS SEQRES 7 B 218 VAL VAL GLY GLU PHE LYS ASP ALA LEU ARG ASN SER GLY SEQRES 8 B 218 GLY ASP GLY LEU GLY GLN MET SER LEU GLU PHE TYR GLN SEQRES 9 B 218 LYS LYS LYS SER ARG TRP PRO PHE SER ASP GLU CYS ILE SEQRES 10 B 218 PRO TRP GLU VAL TRP THR VAL LYS VAL HIS VAL VAL ALA SEQRES 11 B 218 LEU ALA THR GLU GLN GLU ARG GLN ILE CYS ARG GLU LYS SEQRES 12 B 218 VAL GLY GLU LYS LEU CYS GLU LYS ILE ILE ASN ILE VAL SEQRES 13 B 218 GLU VAL MET ASN ARG HIS GLU TYR LEU PRO LYS MET PRO SEQRES 14 B 218 THR GLN SER GLU VAL ASP ASN VAL PHE ASP THR GLY LEU SEQRES 15 B 218 ARG ASP VAL GLN PRO TYR LEU TYR LYS ILE SER PHE GLN SEQRES 16 B 218 ILE THR ASP ALA LEU GLY THR SER VAL THR THR THR MET SEQRES 17 B 218 ARG ARG LEU ILE LYS ASP THR LEU ALA LEU SEQRES 1 C 190 MET GLU THR ASP LEU ASN SER GLN ASP ARG LYS ASP LEU SEQRES 2 C 190 ASP LYS PHE ILE LYS PHE PHE ALA LEU LYS THR VAL GLN SEQRES 3 C 190 VAL ILE VAL GLN ALA ARG LEU GLY GLU LYS ILE CYS THR SEQRES 4 C 190 ARG SER SER SER SER PRO THR GLY SER ASP TRP PHE ASN SEQRES 5 C 190 LEU ALA ILE LYS ASP ILE PRO GLU VAL THR HIS GLU ALA SEQRES 6 C 190 LYS LYS ALA LEU ALA GLY GLN LEU PRO ALA VAL GLY ARG SEQRES 7 C 190 SER MET CYS VAL GLU ILE SER LEU LYS THR SER GLU GLY SEQRES 8 C 190 ASP SER MET GLU LEU GLU ILE TRP CYS LEU GLU MET ASN SEQRES 9 C 190 GLU LYS CYS ASP LYS GLU ILE LYS VAL SER TYR THR VAL SEQRES 10 C 190 TYR ASN ARG LEU SER LEU LEU LEU LYS SER LEU LEU ALA SEQRES 11 C 190 ILE THR ARG VAL THR PRO ALA TYR ARG LEU SER ARG LYS SEQRES 12 C 190 GLN GLY HIS GLU TYR VAL ILE LEU TYR ARG ILE TYR PHE SEQRES 13 C 190 GLY GLU VAL GLN LEU SER GLY LEU GLY GLU GLY PHE GLN SEQRES 14 C 190 THR VAL ARG VAL GLY THR VAL GLY THR PRO VAL GLY THR SEQRES 15 C 190 ILE THR LEU SER CYS ALA TYR ARG SEQRES 1 D 218 MET ASN CYS ARG SER GLU VAL LEU GLU VAL SER VAL GLU SEQRES 2 D 218 GLY ARG GLN VAL GLU GLU ALA MET LEU ALA VAL LEU HIS SEQRES 3 D 218 THR VAL LEU LEU HIS ARG SER THR GLY LYS PHE HIS TYR SEQRES 4 D 218 ALA ALA ALA GLY THR TYR SER ILE GLY THR VAL GLY THR SEQRES 5 D 218 GLN ASP VAL ASP CYS ASP PHE ILE ASP PHE THR TYR VAL SEQRES 6 D 218 ARG VAL SER SER GLU GLU LEU ASP ARG ALA LEU ARG LYS SEQRES 7 D 218 VAL VAL GLY GLU PHE LYS ASP ALA LEU ARG ASN SER GLY SEQRES 8 D 218 GLY ASP GLY LEU GLY GLN MET SER LEU GLU PHE TYR GLN SEQRES 9 D 218 LYS LYS LYS SER ARG TRP PRO PHE SER ASP GLU CYS ILE SEQRES 10 D 218 PRO TRP GLU VAL TRP THR VAL LYS VAL HIS VAL VAL ALA SEQRES 11 D 218 LEU ALA THR GLU GLN GLU ARG GLN ILE CYS ARG GLU LYS SEQRES 12 D 218 VAL GLY GLU LYS LEU CYS GLU LYS ILE ILE ASN ILE VAL SEQRES 13 D 218 GLU VAL MET ASN ARG HIS GLU TYR LEU PRO LYS MET PRO SEQRES 14 D 218 THR GLN SER GLU VAL ASP ASN VAL PHE ASP THR GLY LEU SEQRES 15 D 218 ARG ASP VAL GLN PRO TYR LEU TYR LYS ILE SER PHE GLN SEQRES 16 D 218 ILE THR ASP ALA LEU GLY THR SER VAL THR THR THR MET SEQRES 17 D 218 ARG ARG LEU ILE LYS ASP THR LEU ALA LEU FORMUL 5 HOH *32(H2 O) HELIX 1 AA1 SER A 7 ALA A 31 1 25 HELIX 2 AA2 ASP A 49 LEU A 53 5 5 HELIX 3 AA3 ILE A 58 ALA A 70 1 13 HELIX 4 AA4 TYR A 115 THR A 132 1 18 HELIX 5 AA5 THR A 135 LYS A 143 1 9 HELIX 6 AA6 LEU A 161 GLY A 165 5 5 HELIX 7 AA7 GLU B 13 ARG B 15 5 3 HELIX 8 AA8 GLN B 16 ARG B 32 1 17 HELIX 9 AA9 SER B 69 GLY B 91 1 23 HELIX 10 AB1 THR B 133 HIS B 162 1 30 HELIX 11 AB2 GLU B 173 VAL B 177 5 5 HELIX 12 AB3 VAL B 204 LEU B 211 1 8 HELIX 13 AB4 SER C 7 ARG C 32 1 26 HELIX 14 AB5 ASP C 49 LEU C 53 5 5 HELIX 15 AB6 ILE C 58 ALA C 70 1 13 HELIX 16 AB7 TYR C 115 THR C 132 1 18 HELIX 17 AB8 THR C 135 ARG C 142 1 8 HELIX 18 AB9 LEU C 161 GLY C 165 5 5 HELIX 19 AC1 GLN D 16 ARG D 32 1 17 HELIX 20 AC2 SER D 69 ASN D 89 1 21 HELIX 21 AC3 GLU D 134 ASN D 160 1 27 HELIX 22 AC4 SER D 172 VAL D 177 5 6 HELIX 23 AC5 THR D 205 LEU D 216 1 12 SHEET 1 AA1 5 TYR A 148 GLY A 157 0 SHEET 2 AA1 5 SER A 79 THR A 88 -1 N GLU A 83 O ARG A 153 SHEET 3 AA1 5 SER A 93 MET A 103 -1 O LEU A 96 N ILE A 84 SHEET 4 AA1 5 GLY A 181 TYR A 189 -1 O SER A 186 N CYS A 100 SHEET 5 AA1 5 GLN A 169 THR A 178 -1 N GLY A 174 O LEU A 185 SHEET 1 AA2 4 ARG B 4 VAL B 12 0 SHEET 2 AA2 4 GLU B 115 VAL B 128 1 O THR B 123 N LEU B 8 SHEET 3 AA2 4 LEU B 95 LYS B 106 -1 N PHE B 102 O GLU B 120 SHEET 4 AA2 4 TYR B 190 ILE B 196 -1 O SER B 193 N SER B 99 SHEET 1 AA3 2 SER B 33 THR B 34 0 SHEET 2 AA3 2 GLN B 186 PRO B 187 -1 O GLN B 186 N THR B 34 SHEET 1 AA4 2 PHE B 37 TYR B 39 0 SHEET 2 AA4 2 TYR B 45 ILE B 47 -1 O SER B 46 N HIS B 38 SHEET 1 AA5 2 THR B 52 ASP B 56 0 SHEET 2 AA5 2 THR B 63 VAL B 67 -1 O ARG B 66 N GLN B 53 SHEET 1 AA6 5 TYR C 148 GLY C 157 0 SHEET 2 AA6 5 SER C 79 THR C 88 -1 N CYS C 81 O TYR C 155 SHEET 3 AA6 5 SER C 93 MET C 103 -1 O GLU C 97 N ILE C 84 SHEET 4 AA6 5 GLY C 181 TYR C 189 -1 O THR C 184 N GLU C 102 SHEET 5 AA6 5 GLN C 169 THR C 178 -1 N GLN C 169 O TYR C 189 SHEET 1 AA7 4 ARG D 4 GLU D 13 0 SHEET 2 AA7 4 GLU D 115 VAL D 129 1 O THR D 123 N GLU D 6 SHEET 3 AA7 4 LEU D 95 LYS D 106 -1 N GLY D 96 O VAL D 126 SHEET 4 AA7 4 TYR D 190 ILE D 196 -1 O LYS D 191 N GLU D 101 SHEET 1 AA8 2 SER D 33 THR D 34 0 SHEET 2 AA8 2 GLN D 186 PRO D 187 -1 O GLN D 186 N THR D 34 SHEET 1 AA9 2 PHE D 37 TYR D 39 0 SHEET 2 AA9 2 TYR D 45 ILE D 47 -1 O SER D 46 N HIS D 38 SHEET 1 AB1 2 THR D 52 ASP D 56 0 SHEET 2 AB1 2 THR D 63 VAL D 67 -1 O TYR D 64 N VAL D 55 CISPEP 1 GLY A 157 GLU A 158 0 -0.40 CISPEP 2 TRP B 110 PRO B 111 0 4.31 CISPEP 3 GLY C 145 HIS C 146 0 1.95 CISPEP 4 GLY C 157 GLU C 158 0 0.62 CISPEP 5 MET D 1 ASN D 2 0 -2.97 CISPEP 6 TRP D 110 PRO D 111 0 3.51 CRYST1 88.483 125.505 101.038 90.00 101.66 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011302 0.000000 0.002332 0.00000 SCALE2 0.000000 0.007968 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010106 0.00000