HEADER TRANSFERASE 28-JUN-17 5XVK TITLE CRYSTAL STRUCTURE OF MOUSE NICOTINAMIDE N-METHYLTRANSFERASE (NNMT) TITLE 2 BOUND WITH END PRODUCT, 1-METHYL NICOTINAMIDE (MNA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICOTINAMIDE N-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: NNMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS NNMT, MNA, TERNARY COMPLEX, FEEDBACK INHIBITION, T2D, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SWAMINATHAN,S.BIRUDUKOTA,M.K.THAKUR,R.PARVEEN,S.KANDAN,A.KANNT, AUTHOR 2 R.GOSU REVDAT 5 22-NOV-23 5XVK 1 REMARK REVDAT 4 04-DEC-19 5XVK 1 REMARK REVDAT 3 14-MAR-18 5XVK 1 COMPND HETNAM HETSYN FORMUL REVDAT 2 23-AUG-17 5XVK 1 JRNL REVDAT 1 02-AUG-17 5XVK 0 JRNL AUTH S.SWAMINATHAN,S.BIRUDUKOTA,M.K.THAKUR,R.PARVEEN,S.KANDAN, JRNL AUTH 2 S.JULURI,S.SHAIK,N.N.ANAND,R.R.BURRI,R.KRISTAM,M.S.HALLUR, JRNL AUTH 3 S.RAJAGOPAL,H.SCHREUDER,T.LANGER,C.RUDOLPH,S.RUF, JRNL AUTH 4 S.DHAKSHINAMOORTHY,R.GOSU,A.KANNT JRNL TITL CRYSTAL STRUCTURES OF MONKEY AND MOUSE NICOTINAMIDE JRNL TITL 2 N-METHYLTRANSFERASE (NNMT) BOUND WITH END PRODUCT, 1-METHYL JRNL TITL 3 NICOTINAMIDE JRNL REF BIOCHEM. BIOPHYS. RES. V. 491 416 2017 JRNL REF 2 COMMUN. JRNL REFN ESSN 1090-2104 JRNL PMID 28720493 JRNL DOI 10.1016/J.BBRC.2017.07.087 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2233 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2918 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 161 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4080 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 335 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.36000 REMARK 3 B22 (A**2) : 0.41000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.937 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4312 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5860 ; 1.160 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 537 ; 5.467 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;29.846 ;24.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;13.379 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;15.731 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 644 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3313 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1998 ; 0.188 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2969 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 312 ; 0.104 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 71 ; 0.203 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 34 ; 0.128 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5XVK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44282 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 78.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 8.30 REMARK 200 R MERGE FOR SHELL (I) : 0.53600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 8.2.01 REMARK 200 STARTING MODEL: 2I62 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.25M SODIUM THIOCYANATE, 22%(W/V) PEG REMARK 280 3350, 3% TMAO AS ADDITIVE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.56900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.52100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.84950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.52100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.56900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.84950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 SER B 3 REMARK 465 ARG B 262 REMARK 465 SER B 263 REMARK 465 GLU B 264 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 129 CD OE1 OE2 REMARK 470 SER A 263 OG REMARK 470 ASP B 9 CG OD1 OD2 REMARK 470 LYS B 47 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 245 -4.92 72.10 REMARK 500 SER A 263 -91.41 -123.07 REMARK 500 HIS B 31 50.50 74.72 REMARK 500 SER B 243 151.42 -48.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8GC A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8GC B 302 DBREF 5XVK A 1 264 UNP O55239 NNMT_MOUSE 1 264 DBREF 5XVK B 1 264 UNP O55239 NNMT_MOUSE 1 264 SEQADV 5XVK MET A -19 UNP O55239 EXPRESSION TAG SEQADV 5XVK GLY A -18 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER A -17 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER A -16 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS A -15 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS A -14 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS A -13 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS A -12 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS A -11 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS A -10 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER A -9 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER A -8 UNP O55239 EXPRESSION TAG SEQADV 5XVK GLY A -7 UNP O55239 EXPRESSION TAG SEQADV 5XVK LEU A -6 UNP O55239 EXPRESSION TAG SEQADV 5XVK VAL A -5 UNP O55239 EXPRESSION TAG SEQADV 5XVK PRO A -4 UNP O55239 EXPRESSION TAG SEQADV 5XVK ARG A -3 UNP O55239 EXPRESSION TAG SEQADV 5XVK GLY A -2 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER A -1 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS A 0 UNP O55239 EXPRESSION TAG SEQADV 5XVK MET B -19 UNP O55239 EXPRESSION TAG SEQADV 5XVK GLY B -18 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER B -17 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER B -16 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS B -15 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS B -14 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS B -13 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS B -12 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS B -11 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS B -10 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER B -9 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER B -8 UNP O55239 EXPRESSION TAG SEQADV 5XVK GLY B -7 UNP O55239 EXPRESSION TAG SEQADV 5XVK LEU B -6 UNP O55239 EXPRESSION TAG SEQADV 5XVK VAL B -5 UNP O55239 EXPRESSION TAG SEQADV 5XVK PRO B -4 UNP O55239 EXPRESSION TAG SEQADV 5XVK ARG B -3 UNP O55239 EXPRESSION TAG SEQADV 5XVK GLY B -2 UNP O55239 EXPRESSION TAG SEQADV 5XVK SER B -1 UNP O55239 EXPRESSION TAG SEQADV 5XVK HIS B 0 UNP O55239 EXPRESSION TAG SEQRES 1 A 284 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 284 LEU VAL PRO ARG GLY SER HIS MET GLU SER GLY PHE THR SEQRES 3 A 284 SER LYS ASP THR TYR LEU SER HIS PHE ASN PRO ARG ASP SEQRES 4 A 284 TYR LEU GLU LYS TYR TYR SER PHE GLY SER ARG HIS CYS SEQRES 5 A 284 ALA GLU ASN GLU ILE LEU ARG HIS LEU LEU LYS ASN LEU SEQRES 6 A 284 PHE LYS ILE PHE CYS LEU GLY ALA VAL LYS GLY GLU LEU SEQRES 7 A 284 LEU ILE ASP ILE GLY SER GLY PRO THR ILE TYR GLN LEU SEQRES 8 A 284 LEU SER ALA CYS GLU SER PHE THR GLU ILE ILE VAL SER SEQRES 9 A 284 ASP TYR THR ASP GLN ASN LEU TRP GLU LEU GLN LYS TRP SEQRES 10 A 284 LEU LYS LYS GLU PRO GLY ALA PHE ASP TRP SER PRO VAL SEQRES 11 A 284 VAL THR TYR VAL CYS ASP LEU GLU GLY ASN ARG MET LYS SEQRES 12 A 284 GLY PRO GLU LYS GLU GLU LYS LEU ARG ARG ALA ILE LYS SEQRES 13 A 284 GLN VAL LEU LYS CYS ASP VAL THR GLN SER GLN PRO LEU SEQRES 14 A 284 GLY GLY VAL SER LEU PRO PRO ALA ASP CYS LEU LEU SER SEQRES 15 A 284 THR LEU CYS LEU ASP ALA ALA CYS PRO ASP LEU PRO ALA SEQRES 16 A 284 TYR ARG THR ALA LEU ARG ASN LEU GLY SER LEU LEU LYS SEQRES 17 A 284 PRO GLY GLY PHE LEU VAL MET VAL ASP ALA LEU LYS SER SEQRES 18 A 284 SER TYR TYR MET ILE GLY GLU GLN LYS PHE SER SER LEU SEQRES 19 A 284 PRO LEU GLY TRP GLU THR VAL ARG ASP ALA VAL GLU GLU SEQRES 20 A 284 ALA GLY TYR THR ILE GLU GLN PHE GLU VAL ILE SER GLN SEQRES 21 A 284 ASN TYR SER SER THR THR SER ASN ASN GLU GLY LEU PHE SEQRES 22 A 284 SER LEU VAL GLY ARG LYS PRO GLY ARG SER GLU SEQRES 1 B 284 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 284 LEU VAL PRO ARG GLY SER HIS MET GLU SER GLY PHE THR SEQRES 3 B 284 SER LYS ASP THR TYR LEU SER HIS PHE ASN PRO ARG ASP SEQRES 4 B 284 TYR LEU GLU LYS TYR TYR SER PHE GLY SER ARG HIS CYS SEQRES 5 B 284 ALA GLU ASN GLU ILE LEU ARG HIS LEU LEU LYS ASN LEU SEQRES 6 B 284 PHE LYS ILE PHE CYS LEU GLY ALA VAL LYS GLY GLU LEU SEQRES 7 B 284 LEU ILE ASP ILE GLY SER GLY PRO THR ILE TYR GLN LEU SEQRES 8 B 284 LEU SER ALA CYS GLU SER PHE THR GLU ILE ILE VAL SER SEQRES 9 B 284 ASP TYR THR ASP GLN ASN LEU TRP GLU LEU GLN LYS TRP SEQRES 10 B 284 LEU LYS LYS GLU PRO GLY ALA PHE ASP TRP SER PRO VAL SEQRES 11 B 284 VAL THR TYR VAL CYS ASP LEU GLU GLY ASN ARG MET LYS SEQRES 12 B 284 GLY PRO GLU LYS GLU GLU LYS LEU ARG ARG ALA ILE LYS SEQRES 13 B 284 GLN VAL LEU LYS CYS ASP VAL THR GLN SER GLN PRO LEU SEQRES 14 B 284 GLY GLY VAL SER LEU PRO PRO ALA ASP CYS LEU LEU SER SEQRES 15 B 284 THR LEU CYS LEU ASP ALA ALA CYS PRO ASP LEU PRO ALA SEQRES 16 B 284 TYR ARG THR ALA LEU ARG ASN LEU GLY SER LEU LEU LYS SEQRES 17 B 284 PRO GLY GLY PHE LEU VAL MET VAL ASP ALA LEU LYS SER SEQRES 18 B 284 SER TYR TYR MET ILE GLY GLU GLN LYS PHE SER SER LEU SEQRES 19 B 284 PRO LEU GLY TRP GLU THR VAL ARG ASP ALA VAL GLU GLU SEQRES 20 B 284 ALA GLY TYR THR ILE GLU GLN PHE GLU VAL ILE SER GLN SEQRES 21 B 284 ASN TYR SER SER THR THR SER ASN ASN GLU GLY LEU PHE SEQRES 22 B 284 SER LEU VAL GLY ARG LYS PRO GLY ARG SER GLU HET SAH A 301 26 HET 8GC A 302 17 HET GOL A 303 6 HET SAH B 301 26 HET 8GC B 302 17 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM 8GC 3-CARBAMOYL-1-METHYLPYRIDIN-1-IUM HETNAM GOL GLYCEROL HETSYN 8GC 1-METHYLNICOTINAMIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 4 8GC 2(C7 H9 N2 O 1+) FORMUL 5 GOL C3 H8 O3 FORMUL 8 HOH *335(H2 O) HELIX 1 AA1 SER A 7 PHE A 15 1 9 HELIX 2 AA2 ASN A 16 SER A 26 1 11 HELIX 3 AA3 HIS A 31 LEU A 51 1 21 HELIX 4 AA4 ILE A 68 LEU A 72 5 5 HELIX 5 AA5 SER A 73 GLU A 76 5 4 HELIX 6 AA6 THR A 87 LYS A 99 1 13 HELIX 7 AA7 TRP A 107 GLU A 118 1 12 HELIX 8 AA8 LYS A 123 ALA A 134 1 12 HELIX 9 AA9 CYS A 165 CYS A 170 1 6 HELIX 10 AB1 ASP A 172 SER A 185 1 14 HELIX 11 AB2 GLY A 217 ALA A 228 1 12 HELIX 12 AB3 SER B 7 PHE B 15 1 9 HELIX 13 AB4 ASN B 16 TYR B 25 1 10 HELIX 14 AB5 HIS B 31 LEU B 51 1 21 HELIX 15 AB6 ILE B 68 LEU B 72 5 5 HELIX 16 AB7 SER B 73 SER B 77 5 5 HELIX 17 AB8 THR B 87 LYS B 99 1 13 HELIX 18 AB9 TRP B 107 GLU B 118 1 12 HELIX 19 AC1 LYS B 123 ALA B 134 1 12 HELIX 20 AC2 CYS B 165 CYS B 170 1 6 HELIX 21 AC3 ASP B 172 SER B 185 1 14 HELIX 22 AC4 GLY B 217 ALA B 228 1 12 SHEET 1 AA1 7 ILE A 135 LYS A 140 0 SHEET 2 AA1 7 PHE A 78 ASP A 85 1 N VAL A 83 O LEU A 139 SHEET 3 AA1 7 GLY A 56 ILE A 62 1 N ASP A 61 O ILE A 82 SHEET 4 AA1 7 ALA A 157 THR A 163 1 O LEU A 161 N ILE A 62 SHEET 5 AA1 7 LEU A 187 ALA A 198 1 O VAL A 194 N LEU A 160 SHEET 6 AA1 7 LEU A 252 ARG A 258 -1 O GLY A 257 N LEU A 193 SHEET 7 AA1 7 THR A 231 ILE A 238 -1 N ILE A 238 O LEU A 252 SHEET 1 AA2 2 TYR A 203 ILE A 206 0 SHEET 2 AA2 2 GLN A 209 SER A 212 -1 O GLN A 209 N ILE A 206 SHEET 1 AA3 7 ILE B 135 LYS B 140 0 SHEET 2 AA3 7 GLU B 80 ASP B 85 1 N ILE B 81 O LYS B 136 SHEET 3 AA3 7 LEU B 58 ILE B 62 1 N ASP B 61 O ILE B 82 SHEET 4 AA3 7 ALA B 157 THR B 163 1 O LEU B 161 N ILE B 62 SHEET 5 AA3 7 LEU B 187 ALA B 198 1 O VAL B 194 N LEU B 160 SHEET 6 AA3 7 LEU B 252 ARG B 258 -1 O GLY B 257 N LEU B 193 SHEET 7 AA3 7 THR B 231 ILE B 238 -1 N ILE B 238 O LEU B 252 SHEET 1 AA4 2 TYR B 203 ILE B 206 0 SHEET 2 AA4 2 GLN B 209 SER B 212 -1 O PHE B 211 N TYR B 204 SITE 1 AC1 20 TYR A 11 TYR A 20 TYR A 25 GLY A 63 SITE 2 AC1 20 SER A 64 GLY A 65 THR A 67 TYR A 69 SITE 3 AC1 20 ASP A 85 TYR A 86 THR A 87 ASN A 90 SITE 4 AC1 20 ASP A 142 VAL A 143 THR A 163 LEU A 164 SITE 5 AC1 20 ALA A 169 8GC A 302 HOH A 490 HOH A 497 SITE 1 AC2 10 TYR A 20 TYR A 24 LEU A 164 ALA A 198 SITE 2 AC2 10 SER A 201 TYR A 204 SER A 213 TYR A 242 SITE 3 AC2 10 SAH A 301 HOH A 439 SITE 1 AC3 6 LYS A 210 HOH A 401 HOH A 424 HOH A 467 SITE 2 AC3 6 GLN B 95 ILE B 135 SITE 1 AC4 21 TYR B 11 TYR B 20 TYR B 25 GLY B 63 SITE 2 AC4 21 SER B 64 GLY B 65 THR B 67 TYR B 69 SITE 3 AC4 21 ASP B 85 TYR B 86 THR B 87 ASN B 90 SITE 4 AC4 21 CYS B 141 ASP B 142 VAL B 143 THR B 163 SITE 5 AC4 21 LEU B 164 ALA B 169 8GC B 302 HOH B 467 SITE 6 AC4 21 HOH B 486 SITE 1 AC5 10 TYR B 20 TYR B 24 LEU B 164 ALA B 198 SITE 2 AC5 10 SER B 201 TYR B 204 SER B 213 TYR B 242 SITE 3 AC5 10 SAH B 301 HOH B 454 CRYST1 47.138 71.699 157.042 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021214 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013947 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006368 0.00000