HEADER OXIDOREDUCTASE 04-JUL-17 5XXI TITLE CRYSTAL STRUCTURE OF CYP2C9 IN COMPLEX WITH MULTIPLE LOSARTAN TITLE 2 MOLECULES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 2C9; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 28-490; COMPND 5 SYNONYM: (R)-LIMONENE 6-MONOOXYGENASE,(S)-LIMONENE 6-MONOOXYGENASE, COMPND 6 (S)-LIMONENE 7-MONOOXYGENASE,CYPIIC9,CHOLESTEROL 25-HYDROXYLASE, COMPND 7 CYTOCHROME P-450MP,CYTOCHROME P450 MP-4,CYTOCHROME P450 MP-8, COMPND 8 CYTOCHROME P450 PB-1,S-MEPHENYTOIN 4-HYDROXYLASE; COMPND 9 EC: 1.14.13.-,1.14.13.80,1.14.13.48,1.14.13.49,1.14.99.38; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CYP2C9, CYP2C10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE, CYP2C9, P450 2C9 EXPDTA X-RAY DIFFRACTION AUTHOR K.MAEKAWA,M.ADACHI,M.B.SHAH REVDAT 4 22-NOV-23 5XXI 1 REMARK REVDAT 3 13-DEC-17 5XXI 1 REMARK REVDAT 2 15-NOV-17 5XXI 1 JRNL REVDAT 1 25-OCT-17 5XXI 0 JRNL AUTH K.MAEKAWA,M.ADACHI,Y.MATSUZAWA,Q.ZHANG,R.KUROKI,Y.SAITO, JRNL AUTH 2 M.B.SHAH JRNL TITL STRUCTURAL BASIS OF SINGLE-NUCLEOTIDE POLYMORPHISMS IN JRNL TITL 2 CYTOCHROME P450 2C9 JRNL REF BIOCHEMISTRY V. 56 5476 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 28972767 JRNL DOI 10.1021/ACS.BIOCHEM.7B00795 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 36303 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2633 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.3760 REMARK 3 BIN FREE R VALUE SET COUNT : 159 REMARK 3 BIN FREE R VALUE : 0.3580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3655 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 134 REMARK 3 SOLVENT ATOMS : 103 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -15.29000 REMARK 3 B22 (A**2) : 14.32000 REMARK 3 B33 (A**2) : 0.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.040 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.044 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.309 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3927 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5341 ; 2.855 ; 2.022 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 462 ; 7.747 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 166 ;37.948 ;24.458 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 642 ;18.031 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;20.983 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 608 ; 0.441 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3035 ; 0.019 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 5XXI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300003170. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36523 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.64000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1R9O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG-8000 AND 0.1M HEPES REMARK 280 PH7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.28550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 71.47900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 80.71000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.28550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 71.47900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 80.71000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.28550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 71.47900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.71000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.28550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 71.47900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 80.71000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 138 CG CD CE NZ REMARK 470 ILE A 223 CG1 CG2 CD1 REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 ARG A 333 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 375 CG CD CE NZ REMARK 470 LYS A 399 CG CD CE NZ REMARK 470 LYS A 421 CG CD CE NZ REMARK 470 LYS A 432 CG CD CE NZ REMARK 470 LYS A 465 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C10 LSN A 503 O HOH A 609 1.69 REMARK 500 C13 LSN A 503 O HOH A 609 1.71 REMARK 500 O PHE A 476 N4 LSN A 503 2.01 REMARK 500 O PHE A 476 N4 LSN A 503 2.03 REMARK 500 O GLN A 214 CL LSN A 503 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 273 NH2 ARG A 329 8455 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 124 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP A 191 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 PRO A 279 C - N - CD ANGL. DEV. = 16.2 DEGREES REMARK 500 MET A 345 CG - SD - CE ANGL. DEV. = -9.6 DEGREES REMARK 500 PRO A 382 C - N - CD ANGL. DEV. = -14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 38 -49.97 72.08 REMARK 500 LEU A 71 -51.27 73.99 REMARK 500 ILE A 88 -62.84 -99.01 REMARK 500 LEU A 90 40.98 -95.50 REMARK 500 ASN A 107 47.56 30.89 REMARK 500 LYS A 158 -19.79 -46.25 REMARK 500 HIS A 184 -11.01 70.47 REMARK 500 TYR A 189 7.07 -58.01 REMARK 500 ASP A 191 107.09 -51.48 REMARK 500 ILE A 215 -71.31 -123.39 REMARK 500 GLU A 272 64.17 -69.34 REMARK 500 LYS A 273 -14.46 175.78 REMARK 500 LYS A 275 -13.61 -46.26 REMARK 500 GLU A 281 -18.37 -48.42 REMARK 500 ASN A 334 -76.31 -80.79 REMARK 500 SER A 365 -139.96 56.89 REMARK 500 ARG A 377 -62.38 66.53 REMARK 500 ASN A 378 13.39 -155.82 REMARK 500 LYS A 383 128.92 -31.93 REMARK 500 ASP A 408 106.18 -164.68 REMARK 500 SER A 429 -159.38 75.84 REMARK 500 ILE A 434 137.21 -32.88 REMARK 500 LEU A 461 -73.42 -73.47 REMARK 500 VAL A 462 178.26 -57.20 REMARK 500 LEU A 467 124.29 -37.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 504 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 435 SG REMARK 620 2 HEM A 504 NA 98.0 REMARK 620 3 HEM A 504 NB 89.4 86.7 REMARK 620 4 HEM A 504 NC 84.4 177.5 92.5 REMARK 620 5 HEM A 504 ND 93.7 93.5 176.9 87.2 REMARK 620 6 HOH A 604 O 158.6 103.4 92.1 74.2 84.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LSN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LSN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LSN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5X23 RELATED DB: PDB REMARK 900 RELATED ID: 5X24 RELATED DB: PDB DBREF 5XXI A 28 490 UNP P11712 CP2C9_HUMAN 28 490 SEQADV 5XXI ILE A 490 UNP P11712 VAL 490 ENGINEERED MUTATION SEQRES 1 A 463 LYS LEU PRO PRO GLY PRO THR PRO LEU PRO VAL ILE GLY SEQRES 2 A 463 ASN ILE LEU GLN ILE GLY ILE LYS ASP ILE SER LYS SER SEQRES 3 A 463 LEU THR ASN LEU SER LYS VAL TYR GLY PRO VAL PHE THR SEQRES 4 A 463 LEU TYR PHE GLY LEU LYS PRO ILE VAL VAL LEU HIS GLY SEQRES 5 A 463 TYR GLU ALA VAL LYS GLU ALA LEU ILE ASP LEU GLY GLU SEQRES 6 A 463 GLU PHE SER GLY ARG GLY ILE PHE PRO LEU ALA GLU ARG SEQRES 7 A 463 ALA ASN ARG GLY PHE GLY ILE VAL PHE SER ASN GLY LYS SEQRES 8 A 463 LYS TRP LYS GLU ILE ARG ARG PHE SER LEU MET THR LEU SEQRES 9 A 463 ARG ASN PHE GLY MET GLY LYS ARG SER ILE GLU ASP ARG SEQRES 10 A 463 VAL GLN GLU GLU ALA ARG CYS LEU VAL GLU GLU LEU ARG SEQRES 11 A 463 LYS THR LYS ALA SER PRO CYS ASP PRO THR PHE ILE LEU SEQRES 12 A 463 GLY CYS ALA PRO CYS ASN VAL ILE CYS SER ILE ILE PHE SEQRES 13 A 463 HIS LYS ARG PHE ASP TYR LYS ASP GLN GLN PHE LEU ASN SEQRES 14 A 463 LEU MET GLU LYS LEU ASN GLU ASN ILE LYS ILE LEU SER SEQRES 15 A 463 SER PRO TRP ILE GLN ILE CYS ASN ASN PHE SER PRO ILE SEQRES 16 A 463 ILE ASP TYR PHE PRO GLY THR HIS ASN LYS LEU LEU LYS SEQRES 17 A 463 ASN VAL ALA PHE MET LYS SER TYR ILE LEU GLU LYS VAL SEQRES 18 A 463 LYS GLU HIS GLN GLU SER MET ASP MET ASN ASN PRO GLN SEQRES 19 A 463 ASP PHE ILE ASP CYS PHE LEU MET LYS MET GLU LYS GLU SEQRES 20 A 463 LYS HIS ASN GLN PRO SER GLU PHE THR ILE GLU SER LEU SEQRES 21 A 463 GLU ASN THR ALA VAL ASP LEU PHE GLY ALA GLY THR GLU SEQRES 22 A 463 THR THR SER THR THR LEU ARG TYR ALA LEU LEU LEU LEU SEQRES 23 A 463 LEU LYS HIS PRO GLU VAL THR ALA LYS VAL GLN GLU GLU SEQRES 24 A 463 ILE GLU ARG VAL ILE GLY ARG ASN ARG SER PRO CYS MET SEQRES 25 A 463 GLN ASP ARG SER HIS MET PRO TYR THR ASP ALA VAL VAL SEQRES 26 A 463 HIS GLU VAL GLN ARG TYR ILE ASP LEU LEU PRO THR SER SEQRES 27 A 463 LEU PRO HIS ALA VAL THR CYS ASP ILE LYS PHE ARG ASN SEQRES 28 A 463 TYR LEU ILE PRO LYS GLY THR THR ILE LEU ILE SER LEU SEQRES 29 A 463 THR SER VAL LEU HIS ASP ASN LYS GLU PHE PRO ASN PRO SEQRES 30 A 463 GLU MET PHE ASP PRO HIS HIS PHE LEU ASP GLU GLY GLY SEQRES 31 A 463 ASN PHE LYS LYS SER LYS TYR PHE MET PRO PHE SER ALA SEQRES 32 A 463 GLY LYS ARG ILE CYS VAL GLY GLU ALA LEU ALA GLY MET SEQRES 33 A 463 GLU LEU PHE LEU PHE LEU THR SER ILE LEU GLN ASN PHE SEQRES 34 A 463 ASN LEU LYS SER LEU VAL ASP PRO LYS ASN LEU ASP THR SEQRES 35 A 463 THR PRO VAL VAL ASN GLY PHE ALA SER VAL PRO PRO PHE SEQRES 36 A 463 TYR GLN LEU CYS PHE ILE PRO ILE HET LSN A 501 30 HET LSN A 502 30 HET LSN A 503 60 HET HEM A 504 43 HET K A 505 1 HETNAM LSN [2-BUTYL-5-CHLORANYL-3-[[4-[2-(2H-1,2,3,4-TETRAZOL-5- HETNAM 2 LSN YL)PHENYL]PHENYL]METHYL]IMIDAZOL-4-YL]METHANOL HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM K POTASSIUM ION HETSYN LSN LOSARTAN HETSYN HEM HEME FORMUL 2 LSN 3(C22 H23 CL N6 O) FORMUL 5 HEM C34 H32 FE N4 O4 FORMUL 6 K K 1+ FORMUL 7 HOH *103(H2 O) HELIX 1 AA1 ASP A 49 GLY A 62 1 14 HELIX 2 AA2 GLY A 79 ILE A 88 1 10 HELIX 3 AA3 PHE A 100 ALA A 106 1 7 HELIX 4 AA4 ASN A 116 LEU A 131 1 16 HELIX 5 AA5 SER A 140 LYS A 158 1 19 HELIX 6 AA6 PRO A 166 HIS A 184 1 19 HELIX 7 AA7 ASP A 191 SER A 209 1 19 HELIX 8 AA8 SER A 210 ILE A 215 1 6 HELIX 9 AA9 CYS A 216 PHE A 219 5 4 HELIX 10 AB1 PHE A 226 SER A 254 1 29 HELIX 11 AB2 ASP A 262 GLU A 272 1 11 HELIX 12 AB3 THR A 283 HIS A 316 1 34 HELIX 13 AB4 HIS A 316 ILE A 331 1 16 HELIX 14 AB5 CYS A 338 HIS A 344 5 7 HELIX 15 AB6 MET A 345 ASP A 360 1 16 HELIX 16 AB7 LEU A 391 HIS A 396 1 6 HELIX 17 AB8 ASP A 408 LEU A 413 5 6 HELIX 18 AB9 GLY A 437 PHE A 456 1 20 SHEET 1 AA1 5 VAL A 64 TYR A 68 0 SHEET 2 AA1 5 PRO A 73 HIS A 78 -1 O VAL A 76 N PHE A 65 SHEET 3 AA1 5 THR A 386 SER A 390 1 O LEU A 388 N VAL A 75 SHEET 4 AA1 5 HIS A 368 ALA A 369 -1 N HIS A 368 O ILE A 387 SHEET 5 AA1 5 GLY A 96 ARG A 97 -1 N GLY A 96 O ALA A 369 SHEET 1 AA2 2 ILE A 374 PHE A 376 0 SHEET 2 AA2 2 TYR A 379 ILE A 381 -1 O ILE A 381 N ILE A 374 SHEET 1 AA3 2 ASN A 457 SER A 460 0 SHEET 2 AA3 2 LEU A 485 ILE A 488 -1 O ILE A 488 N ASN A 457 SHEET 1 AA4 2 VAL A 472 VAL A 473 0 SHEET 2 AA4 2 SER A 478 VAL A 479 -1 O VAL A 479 N VAL A 472 LINK SG CYS A 435 FE HEM A 504 1555 1555 2.43 LINK FE HEM A 504 O HOH A 604 1555 1555 2.29 CISPEP 1 GLN A 278 PRO A 279 0 -0.86 SITE 1 AC1 16 ARG A 108 VAL A 113 LEU A 201 ASN A 204 SITE 2 AC1 16 LEU A 208 GLN A 214 VAL A 237 MET A 240 SITE 3 AC1 16 VAL A 292 ASP A 293 GLY A 296 ALA A 297 SITE 4 AC1 16 LEU A 362 LSN A 503 HOH A 646 HOH A 675 SITE 1 AC2 9 LYS A 206 SER A 210 PHE A 226 PRO A 227 SITE 2 AC2 9 GLY A 228 THR A 229 ASN A 231 LYS A 232 SITE 3 AC2 9 LYS A 235 SITE 1 AC3 17 ILE A 74 PHE A 100 LEU A 102 PHE A 114 SITE 2 AC3 17 GLN A 214 ILE A 215 ASN A 218 LEU A 361 SITE 3 AC3 17 LEU A 362 PRO A 363 THR A 364 SER A 365 SITE 4 AC3 17 PRO A 367 LEU A 388 PHE A 476 LSN A 501 SITE 5 AC3 17 HOH A 609 SITE 1 AC4 22 ARG A 97 ILE A 112 VAL A 113 TRP A 120 SITE 2 AC4 22 ARG A 124 ALA A 297 GLY A 298 THR A 301 SITE 3 AC4 22 THR A 302 THR A 305 GLN A 356 SER A 365 SITE 4 AC4 22 HIS A 368 PRO A 427 PHE A 428 SER A 429 SITE 5 AC4 22 ARG A 433 CYS A 435 VAL A 436 GLY A 437 SITE 6 AC4 22 ALA A 441 HOH A 604 CRYST1 74.571 142.958 161.420 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013410 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006995 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006195 0.00000