HEADER PROTEIN BINDING 06-JUL-17 5XY9
TITLE STRUCTURE OF THE MST4 AND 14-3-3 COMPLEX
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 14-3-3 PROTEIN ZETA/DELTA;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: PROTEIN KINASE C INHIBITOR PROTEIN 1,KCIP-1;
COMPND 5 ENGINEERED: YES;
COMPND 6 MOL_ID: 2;
COMPND 7 MOLECULE: PEPTIDE FROM SERINE/THREONINE-PROTEIN KINASE 26;
COMPND 8 CHAIN: C, D;
COMPND 9 FRAGMENT: UNP RESIDUES 314-325;
COMPND 10 SYNONYM: MST3 AND SOK1-RELATED KINASE,MAMMALIAN STE20-LIKE PROTEIN
COMPND 11 KINASE 4,STE20-LIKE KINASE MST4,SERINE/THREONINE-PROTEIN KINASE MASK;
COMPND 12 EC: 2.7.11.1;
COMPND 13 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: YWHAZ;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VARIANT: CODONPLUS;
SOURCE 10 MOL_ID: 2;
SOURCE 11 SYNTHETIC: YES;
SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 13 ORGANISM_COMMON: HUMAN;
SOURCE 14 ORGANISM_TAXID: 9606
KEYWDS KINASE, PROTEIN COMPLEX, PHOSPHORYLATION, SIGNALING PROTEIN, MELANOMA
KEYWDS 2 METASTASIS, PROTEIN BINDING
EXPDTA X-RAY DIFFRACTION
AUTHOR Z.B.SHI,Z.C.ZHOU
REVDAT 3 16-OCT-24 5XY9 1 REMARK
REVDAT 2 22-NOV-23 5XY9 1 REMARK
REVDAT 1 11-JUL-18 5XY9 0
JRNL AUTH Z.SHI,Z.ZHOU
JRNL TITL STRUCTURE OF THE MST4 AND 14-3-3 COMPLEX
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.30 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.82
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5
REMARK 3 NUMBER OF REFLECTIONS : 31225
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.199
REMARK 3 R VALUE (WORKING SET) : 0.195
REMARK 3 FREE R VALUE : 0.245
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.400
REMARK 3 FREE R VALUE TEST SET COUNT : 1999
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 34.8254 - 5.5443 0.99 2230 153 0.1803 0.2047
REMARK 3 2 5.5443 - 4.4035 1.00 2134 146 0.1603 0.2371
REMARK 3 3 4.4035 - 3.8477 1.00 2104 144 0.1477 0.1827
REMARK 3 4 3.8477 - 3.4962 1.00 2114 145 0.1816 0.2169
REMARK 3 5 3.4962 - 3.2458 1.00 2103 143 0.2041 0.2472
REMARK 3 6 3.2458 - 3.0546 1.00 2075 143 0.2192 0.2655
REMARK 3 7 3.0546 - 2.9017 1.00 2085 142 0.2328 0.2773
REMARK 3 8 2.9017 - 2.7754 1.00 2077 143 0.2318 0.3101
REMARK 3 9 2.7754 - 2.6686 1.00 2073 141 0.2390 0.2915
REMARK 3 10 2.6686 - 2.5766 1.00 2074 142 0.2277 0.3249
REMARK 3 11 2.5766 - 2.4960 1.00 2067 141 0.2421 0.3275
REMARK 3 12 2.4960 - 2.4247 1.00 2036 140 0.2648 0.3240
REMARK 3 13 2.4247 - 2.3609 1.00 2063 139 0.2878 0.3718
REMARK 3 14 2.3609 - 2.3033 0.96 1991 137 0.3111 0.3748
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.320
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.007 3817
REMARK 3 ANGLE : 0.916 5159
REMARK 3 CHIRALITY : 0.053 582
REMARK 3 PLANARITY : 0.005 671
REMARK 3 DIHEDRAL : 6.691 3182
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 9
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 37 )
REMARK 3 ORIGIN FOR THE GROUP (A): 39.6366 10.6101 14.1588
REMARK 3 T TENSOR
REMARK 3 T11: 0.6817 T22: 0.8155
REMARK 3 T33: 0.4947 T12: 0.2620
REMARK 3 T13: 0.1165 T23: -0.0205
REMARK 3 L TENSOR
REMARK 3 L11: 8.2064 L22: 2.8542
REMARK 3 L33: 3.9864 L12: 2.5401
REMARK 3 L13: 3.7983 L23: -1.0164
REMARK 3 S TENSOR
REMARK 3 S11: 0.0729 S12: -0.9449 S13: 0.0957
REMARK 3 S21: 0.6000 S22: 0.2262 S23: 0.0612
REMARK 3 S31: -0.5807 S32: -0.9290 S33: -0.1424
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 103 )
REMARK 3 ORIGIN FOR THE GROUP (A): 49.0230 6.2072 -5.0234
REMARK 3 T TENSOR
REMARK 3 T11: 0.4469 T22: 0.3787
REMARK 3 T33: 0.3597 T12: 0.0366
REMARK 3 T13: 0.0456 T23: 0.0683
REMARK 3 L TENSOR
REMARK 3 L11: 2.2538 L22: 1.3106
REMARK 3 L33: 8.2798 L12: -0.1839
REMARK 3 L13: 2.4869 L23: 1.9087
REMARK 3 S TENSOR
REMARK 3 S11: -0.1372 S12: 0.1592 S13: 0.1585
REMARK 3 S21: -0.1290 S22: -0.0444 S23: -0.0654
REMARK 3 S31: -0.2288 S32: 0.4427 S33: 0.1818
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 159 )
REMARK 3 ORIGIN FOR THE GROUP (A): 60.6248 4.6033 9.5340
REMARK 3 T TENSOR
REMARK 3 T11: 0.3678 T22: 0.3671
REMARK 3 T33: 0.3290 T12: -0.0194
REMARK 3 T13: 0.0058 T23: -0.0561
REMARK 3 L TENSOR
REMARK 3 L11: 5.1904 L22: 4.2393
REMARK 3 L33: 6.4662 L12: -1.6285
REMARK 3 L13: 1.6801 L23: -0.6560
REMARK 3 S TENSOR
REMARK 3 S11: -0.1318 S12: -0.1689 S13: 0.2502
REMARK 3 S21: 0.3549 S22: 0.0885 S23: -0.2623
REMARK 3 S31: -0.7385 S32: 0.7157 S33: 0.0258
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 160 THROUGH 230 )
REMARK 3 ORIGIN FOR THE GROUP (A): 59.0239 -11.9440 10.6043
REMARK 3 T TENSOR
REMARK 3 T11: 0.2726 T22: 0.4605
REMARK 3 T33: 0.2971 T12: 0.0637
REMARK 3 T13: -0.0158 T23: -0.0501
REMARK 3 L TENSOR
REMARK 3 L11: 4.5302 L22: 7.3993
REMARK 3 L33: 4.3538 L12: 2.3890
REMARK 3 L13: 0.0715 L23: -2.4679
REMARK 3 S TENSOR
REMARK 3 S11: -0.0022 S12: -0.0458 S13: -0.1961
REMARK 3 S21: 0.2627 S22: 0.0960 S23: -0.0771
REMARK 3 S31: -0.0823 S32: -0.1336 S33: -0.0653
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 69 )
REMARK 3 ORIGIN FOR THE GROUP (A): 29.7804 5.9937 -11.7788
REMARK 3 T TENSOR
REMARK 3 T11: 0.4827 T22: 0.3825
REMARK 3 T33: 0.5021 T12: 0.1315
REMARK 3 T13: -0.0152 T23: 0.0501
REMARK 3 L TENSOR
REMARK 3 L11: 4.5930 L22: 2.0609
REMARK 3 L33: 5.7519 L12: -0.6990
REMARK 3 L13: -0.0188 L23: 0.3405
REMARK 3 S TENSOR
REMARK 3 S11: 0.0092 S12: 0.1412 S13: -0.0302
REMARK 3 S21: -0.1489 S22: 0.1081 S23: 0.3067
REMARK 3 S31: -0.0430 S32: -0.4847 S33: -0.1608
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 111 )
REMARK 3 ORIGIN FOR THE GROUP (A): 21.4320 12.2504 -1.9432
REMARK 3 T TENSOR
REMARK 3 T11: 0.5278 T22: 0.5627
REMARK 3 T33: 0.6092 T12: 0.2273
REMARK 3 T13: 0.0385 T23: 0.0191
REMARK 3 L TENSOR
REMARK 3 L11: 3.3902 L22: 1.8801
REMARK 3 L33: 5.1847 L12: 0.3253
REMARK 3 L13: 1.8707 L23: 0.3775
REMARK 3 S TENSOR
REMARK 3 S11: -0.3407 S12: -0.8920 S13: 0.2291
REMARK 3 S21: 0.1758 S22: 0.1700 S23: 0.3770
REMARK 3 S31: -0.8530 S32: -1.0747 S33: 0.1340
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 112 THROUGH 230 )
REMARK 3 ORIGIN FOR THE GROUP (A): 11.9122 -4.9233 -11.8819
REMARK 3 T TENSOR
REMARK 3 T11: 0.3213 T22: 0.7322
REMARK 3 T33: 0.6191 T12: 0.1012
REMARK 3 T13: 0.0256 T23: -0.0088
REMARK 3 L TENSOR
REMARK 3 L11: 1.2543 L22: 4.0058
REMARK 3 L33: 2.2039 L12: 0.4988
REMARK 3 L13: 1.0312 L23: 0.3688
REMARK 3 S TENSOR
REMARK 3 S11: -0.0896 S12: 0.1396 S13: 0.3282
REMARK 3 S21: -0.0616 S22: -0.0329 S23: 0.5132
REMARK 3 S31: -0.1425 S32: -0.6507 S33: 0.1504
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 316 THROUGH 325 )
REMARK 3 ORIGIN FOR THE GROUP (A): 50.6443 -6.8207 3.4595
REMARK 3 T TENSOR
REMARK 3 T11: 0.6890 T22: 0.6703
REMARK 3 T33: 0.6222 T12: 0.0937
REMARK 3 T13: 0.0583 T23: -0.0766
REMARK 3 L TENSOR
REMARK 3 L11: 8.6000 L22: 8.2642
REMARK 3 L33: 6.5776 L12: -2.6751
REMARK 3 L13: -1.0836 L23: 2.4990
REMARK 3 S TENSOR
REMARK 3 S11: -0.0228 S12: 0.8739 S13: -1.3384
REMARK 3 S21: 0.1696 S22: -0.1327 S23: 1.7585
REMARK 3 S31: 0.6089 S32: 0.1001 S33: 0.4317
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: CHAIN 'D' AND (RESID 316 THROUGH 325 )
REMARK 3 ORIGIN FOR THE GROUP (A): 21.1273 -5.7655 -5.1990
REMARK 3 T TENSOR
REMARK 3 T11: 0.6963 T22: 0.9933
REMARK 3 T33: 0.8572 T12: 0.0492
REMARK 3 T13: -0.0631 T23: 0.0260
REMARK 3 L TENSOR
REMARK 3 L11: 2.2413 L22: 7.6178
REMARK 3 L33: 8.0829 L12: 0.2932
REMARK 3 L13: 4.0646 L23: -1.4627
REMARK 3 S TENSOR
REMARK 3 S11: 0.2675 S12: 0.1349 S13: -0.6850
REMARK 3 S21: 0.8008 S22: 0.1177 S23: -1.1636
REMARK 3 S31: -0.0464 S32: 0.8562 S33: -0.4024
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5XY9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUL-17.
REMARK 100 THE DEPOSITION ID IS D_1300004363.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 11-OCT-15
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 8.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SSRF
REMARK 200 BEAMLINE : BL17U1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31310
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 14.00
REMARK 200 R MERGE (I) : 0.09700
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 38.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9
REMARK 200 DATA REDUNDANCY IN SHELL : 12.30
REMARK 200 R MERGE FOR SHELL (I) : 0.87800
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.000
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHENIX
REMARK 200 STARTING MODEL: 1QJA
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 54.51
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MGCL2, 0.1M TRIS PH 8.5, 25% PEG
REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.49700
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.92950
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.36700
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.92950
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.49700
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.36700
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 5330 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 22380 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A -21
REMARK 465 SER A -20
REMARK 465 TYR A -19
REMARK 465 TYR A -18
REMARK 465 HIS A -17
REMARK 465 HIS A -16
REMARK 465 HIS A -15
REMARK 465 HIS A -14
REMARK 465 HIS A -13
REMARK 465 HIS A -12
REMARK 465 LEU A -11
REMARK 465 GLU A -10
REMARK 465 SER A -9
REMARK 465 THR A -8
REMARK 465 SER A -7
REMARK 465 LEU A -6
REMARK 465 TYR A -5
REMARK 465 LYS A -4
REMARK 465 LYS A -3
REMARK 465 ALA A -2
REMARK 465 GLY A -1
REMARK 465 LEU A 0
REMARK 465 GLN A 233
REMARK 465 GLY A 234
REMARK 465 ASP A 235
REMARK 465 GLU A 236
REMARK 465 ALA A 237
REMARK 465 GLU A 238
REMARK 465 ALA A 239
REMARK 465 GLY A 240
REMARK 465 GLU A 241
REMARK 465 GLY A 242
REMARK 465 GLY A 243
REMARK 465 GLU A 244
REMARK 465 ASN A 245
REMARK 465 MET B -21
REMARK 465 SER B -20
REMARK 465 TYR B -19
REMARK 465 TYR B -18
REMARK 465 HIS B -17
REMARK 465 HIS B -16
REMARK 465 HIS B -15
REMARK 465 HIS B -14
REMARK 465 HIS B -13
REMARK 465 HIS B -12
REMARK 465 LEU B -11
REMARK 465 GLU B -10
REMARK 465 SER B -9
REMARK 465 THR B -8
REMARK 465 SER B -7
REMARK 465 LEU B -6
REMARK 465 TYR B -5
REMARK 465 LYS B -4
REMARK 465 LYS B -3
REMARK 465 ALA B -2
REMARK 465 GLY B -1
REMARK 465 LEU B 0
REMARK 465 ASP B 231
REMARK 465 THR B 232
REMARK 465 GLN B 233
REMARK 465 GLY B 234
REMARK 465 ASP B 235
REMARK 465 GLU B 236
REMARK 465 ALA B 237
REMARK 465 GLU B 238
REMARK 465 ALA B 239
REMARK 465 GLY B 240
REMARK 465 GLU B 241
REMARK 465 GLY B 242
REMARK 465 GLY B 243
REMARK 465 GLU B 244
REMARK 465 ASN B 245
REMARK 465 THR C 314
REMARK 465 SER C 315
REMARK 465 THR D 314
REMARK 465 SER D 315
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 MET A 1 CG SD CE
REMARK 470 LYS A 3 CD CE NZ
REMARK 470 GLU A 5 CG CD OE1 OE2
REMARK 470 GLN A 8 CG CD OE1 NE2
REMARK 470 LYS A 9 CG CD CE NZ
REMARK 470 GLN A 67 CD OE1 NE2
REMARK 470 LYS A 68 CG CD CE NZ
REMARK 470 LYS A 115 CE NZ
REMARK 470 ASP A 136 CG OD1 OD2
REMARK 470 LYS A 139 CG CD CE NZ
REMARK 470 GLN A 150 O
REMARK 470 LYS A 158 CD CE NZ
REMARK 470 GLU A 209 CG CD OE1 OE2
REMARK 470 ASP A 231 CG OD1 OD2
REMARK 470 THR A 232 OG1 CG2
REMARK 470 MET B 1 CG SD CE
REMARK 470 LYS B 3 CD CE NZ
REMARK 470 LYS B 9 CG CD CE NZ
REMARK 470 LYS B 49 CD CE NZ
REMARK 470 GLN B 67 CG CD OE1 NE2
REMARK 470 LYS B 68 CD CE NZ
REMARK 470 GLU B 70 CG CD OE1 OE2
REMARK 470 GLU B 73 CG CD OE1 OE2
REMARK 470 LYS B 74 CG CD CE NZ
REMARK 470 LYS B 75 CG CD CE NZ
REMARK 470 GLN B 77 CD OE1 NE2
REMARK 470 LYS B 85 CD CE NZ
REMARK 470 GLN B 111 CG CD OE1 NE2
REMARK 470 GLU B 113 CG CD OE1 OE2
REMARK 470 ASP B 136 CG OD1 OD2
REMARK 470 ASP B 137 CG OD1 OD2
REMARK 470 LYS B 139 CG CD CE NZ
REMARK 470 GLN B 147 CG CD OE1 NE2
REMARK 470 LYS B 157 CD CE NZ
REMARK 470 LYS B 158 CG CD CE NZ
REMARK 470 GLU B 180 CG CD OE1 OE2
REMARK 470 GLU B 208 CG CD OE1 OE2
REMARK 470 GLU B 209 CG CD OE1 OE2
REMARK 470 ARG C 316 CG CD NE CZ NH1 NH2
REMARK 470 GLU C 317 CG CD OE1 OE2
REMARK 470 TRP C 324 CG CD1 CD2 NE1 CE2 CE3 CZ2
REMARK 470 TRP C 324 CZ3 CH2
REMARK 470 ARG D 316 CG CD NE CZ NH1 NH2
REMARK 470 TRP D 324 CG CD1 CD2 NE1 CE2 CE3 CZ2
REMARK 470 TRP D 324 CZ3 CH2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH B 309 O HOH B 337 2.17
REMARK 500 O HOH B 327 O HOH D 405 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ARG A 18 79.00 -108.93
REMARK 500 PHE A 104 -57.20 -128.67
REMARK 500 ASP A 231 -79.19 -85.37
REMARK 500 ARG B 18 79.39 -108.43
REMARK 500 PHE B 104 -56.54 -129.02
REMARK 500 GLU C 323 -162.23 -107.46
REMARK 500 TRP C 324 76.06 68.87
REMARK 500 GLU D 323 -149.73 -100.15
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 PE4 A 302
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PE4 A 302
DBREF 5XY9 A 1 245 UNP P63104 1433Z_HUMAN 1 245
DBREF 5XY9 B 1 245 UNP P63104 1433Z_HUMAN 1 245
DBREF 5XY9 C 314 325 UNP Q9P289 STK26_HUMAN 314 325
DBREF 5XY9 D 314 325 UNP Q9P289 STK26_HUMAN 314 325
SEQADV 5XY9 MET A -21 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 SER A -20 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 TYR A -19 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 TYR A -18 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS A -17 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS A -16 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS A -15 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS A -14 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS A -13 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS A -12 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LEU A -11 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 GLU A -10 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 SER A -9 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 THR A -8 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 SER A -7 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LEU A -6 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 TYR A -5 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LYS A -4 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LYS A -3 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 ALA A -2 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 GLY A -1 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LEU A 0 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 MET B -21 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 SER B -20 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 TYR B -19 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 TYR B -18 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS B -17 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS B -16 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS B -15 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS B -14 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS B -13 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 HIS B -12 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LEU B -11 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 GLU B -10 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 SER B -9 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 THR B -8 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 SER B -7 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LEU B -6 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 TYR B -5 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LYS B -4 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LYS B -3 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 ALA B -2 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 GLY B -1 UNP P63104 EXPRESSION TAG
SEQADV 5XY9 LEU B 0 UNP P63104 EXPRESSION TAG
SEQRES 1 A 267 MET SER TYR TYR HIS HIS HIS HIS HIS HIS LEU GLU SER
SEQRES 2 A 267 THR SER LEU TYR LYS LYS ALA GLY LEU MET ASP LYS ASN
SEQRES 3 A 267 GLU LEU VAL GLN LYS ALA LYS LEU ALA GLU GLN ALA GLU
SEQRES 4 A 267 ARG TYR ASP ASP MET ALA ALA CYS MET LYS SER VAL THR
SEQRES 5 A 267 GLU GLN GLY ALA GLU LEU SER ASN GLU GLU ARG ASN LEU
SEQRES 6 A 267 LEU SER VAL ALA TYR LYS ASN VAL VAL GLY ALA ARG ARG
SEQRES 7 A 267 SER SER TRP ARG VAL VAL SER SER ILE GLU GLN LYS THR
SEQRES 8 A 267 GLU GLY ALA GLU LYS LYS GLN GLN MET ALA ARG GLU TYR
SEQRES 9 A 267 ARG GLU LYS ILE GLU THR GLU LEU ARG ASP ILE CYS ASN
SEQRES 10 A 267 ASP VAL LEU SER LEU LEU GLU LYS PHE LEU ILE PRO ASN
SEQRES 11 A 267 ALA SER GLN ALA GLU SER LYS VAL PHE TYR LEU LYS MET
SEQRES 12 A 267 LYS GLY ASP TYR TYR ARG TYR LEU ALA GLU VAL ALA ALA
SEQRES 13 A 267 GLY ASP ASP LYS LYS GLY ILE VAL ASP GLN SER GLN GLN
SEQRES 14 A 267 ALA TYR GLN GLU ALA PHE GLU ILE SER LYS LYS GLU MET
SEQRES 15 A 267 GLN PRO THR HIS PRO ILE ARG LEU GLY LEU ALA LEU ASN
SEQRES 16 A 267 PHE SER VAL PHE TYR TYR GLU ILE LEU ASN SER PRO GLU
SEQRES 17 A 267 LYS ALA CYS SER LEU ALA LYS THR ALA PHE ASP GLU ALA
SEQRES 18 A 267 ILE ALA GLU LEU ASP THR LEU SER GLU GLU SER TYR LYS
SEQRES 19 A 267 ASP SER THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU
SEQRES 20 A 267 THR LEU TRP THR SER ASP THR GLN GLY ASP GLU ALA GLU
SEQRES 21 A 267 ALA GLY GLU GLY GLY GLU ASN
SEQRES 1 B 267 MET SER TYR TYR HIS HIS HIS HIS HIS HIS LEU GLU SER
SEQRES 2 B 267 THR SER LEU TYR LYS LYS ALA GLY LEU MET ASP LYS ASN
SEQRES 3 B 267 GLU LEU VAL GLN LYS ALA LYS LEU ALA GLU GLN ALA GLU
SEQRES 4 B 267 ARG TYR ASP ASP MET ALA ALA CYS MET LYS SER VAL THR
SEQRES 5 B 267 GLU GLN GLY ALA GLU LEU SER ASN GLU GLU ARG ASN LEU
SEQRES 6 B 267 LEU SER VAL ALA TYR LYS ASN VAL VAL GLY ALA ARG ARG
SEQRES 7 B 267 SER SER TRP ARG VAL VAL SER SER ILE GLU GLN LYS THR
SEQRES 8 B 267 GLU GLY ALA GLU LYS LYS GLN GLN MET ALA ARG GLU TYR
SEQRES 9 B 267 ARG GLU LYS ILE GLU THR GLU LEU ARG ASP ILE CYS ASN
SEQRES 10 B 267 ASP VAL LEU SER LEU LEU GLU LYS PHE LEU ILE PRO ASN
SEQRES 11 B 267 ALA SER GLN ALA GLU SER LYS VAL PHE TYR LEU LYS MET
SEQRES 12 B 267 LYS GLY ASP TYR TYR ARG TYR LEU ALA GLU VAL ALA ALA
SEQRES 13 B 267 GLY ASP ASP LYS LYS GLY ILE VAL ASP GLN SER GLN GLN
SEQRES 14 B 267 ALA TYR GLN GLU ALA PHE GLU ILE SER LYS LYS GLU MET
SEQRES 15 B 267 GLN PRO THR HIS PRO ILE ARG LEU GLY LEU ALA LEU ASN
SEQRES 16 B 267 PHE SER VAL PHE TYR TYR GLU ILE LEU ASN SER PRO GLU
SEQRES 17 B 267 LYS ALA CYS SER LEU ALA LYS THR ALA PHE ASP GLU ALA
SEQRES 18 B 267 ILE ALA GLU LEU ASP THR LEU SER GLU GLU SER TYR LYS
SEQRES 19 B 267 ASP SER THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU
SEQRES 20 B 267 THR LEU TRP THR SER ASP THR GLN GLY ASP GLU ALA GLU
SEQRES 21 B 267 ALA GLY GLU GLY GLY GLU ASN
SEQRES 1 C 12 THR SER ARG GLU ASN ASN TPO HIS PRO GLU TRP SER
SEQRES 1 D 12 THR SER ARG GLU ASN ASN TPO HIS PRO GLU TRP SER
MODRES 5XY9 TPO C 320 THR MODIFIED RESIDUE
MODRES 5XY9 TPO D 320 THR MODIFIED RESIDUE
HET TPO C 320 11
HET TPO D 320 11
HET GOL A 301 6
HET PE4 A 302 17
HETNAM TPO PHOSPHOTHREONINE
HETNAM GOL GLYCEROL
HETNAM PE4 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-
HETNAM 2 PE4 ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
HETSYN TPO PHOSPHONOTHREONINE
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
HETSYN PE4 POLYETHYLENE GLYCOL PEG4000
FORMUL 3 TPO 2(C4 H10 N O6 P)
FORMUL 5 GOL C3 H8 O3
FORMUL 6 PE4 C16 H34 O8
FORMUL 7 HOH *94(H2 O)
HELIX 1 AA1 MET A 1 ALA A 16 1 16
HELIX 2 AA2 ARG A 18 GLN A 32 1 15
HELIX 3 AA3 SER A 37 THR A 69 1 33
HELIX 4 AA4 ALA A 72 PHE A 104 1 33
HELIX 5 AA5 PHE A 104 ALA A 109 1 6
HELIX 6 AA6 GLN A 111 GLU A 131 1 21
HELIX 7 AA7 GLY A 135 MET A 160 1 26
HELIX 8 AA8 HIS A 164 ILE A 181 1 18
HELIX 9 AA9 SER A 184 ALA A 201 1 18
HELIX 10 AB1 GLU A 202 LEU A 206 5 5
HELIX 11 AB2 SER A 210 THR A 232 1 23
HELIX 12 AB3 ASP B 2 ALA B 16 1 15
HELIX 13 AB4 ARG B 18 GLN B 32 1 15
HELIX 14 AB5 SER B 37 LYS B 68 1 32
HELIX 15 AB6 ALA B 72 PHE B 104 1 33
HELIX 16 AB7 PHE B 104 ALA B 109 1 6
HELIX 17 AB8 GLN B 111 ALA B 133 1 23
HELIX 18 AB9 ASP B 137 MET B 160 1 24
HELIX 19 AC1 HIS B 164 ILE B 181 1 18
HELIX 20 AC2 SER B 184 ALA B 201 1 18
HELIX 21 AC3 GLU B 202 LEU B 206 5 5
HELIX 22 AC4 SER B 210 SER B 230 1 21
LINK C ASN C 319 N TPO C 320 1555 1555 1.34
LINK C TPO C 320 N HIS C 321 1555 1555 1.33
LINK C ASN D 319 N TPO D 320 1555 1555 1.32
LINK C TPO D 320 N HIS D 321 1555 1555 1.33
CISPEP 1 HIS C 321 PRO C 322 0 -1.59
CISPEP 2 HIS D 321 PRO D 322 0 2.05
SITE 1 AC1 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222
SITE 1 AC2 12 SER A 45 LYS A 49 PHE A 117 LYS A 120
SITE 2 AC2 12 MET A 121 ASP A 124 TYR A 128 TPO C 320
SITE 3 AC2 12 HIS C 321 PRO C 322 GLU C 323 HOH C 401
CRYST1 72.994 84.734 111.859 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013700 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011802 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008940 0.00000