HEADER IMMUNE SYSTEM/INHIBITOR 12-JUL-17 5XZG TITLE MOUSE CGAS BOUND TO THE INHIBITOR RU521 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 147-505; COMPND 5 SYNONYM: M-CGAS, 2'3'-CGAMP SYNTHASE, MAB-21 DOMAIN-CONTAINING COMPND 6 PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*G)- COMPND 11 3'); COMPND 12 CHAIN: E; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA (5'-D(P*CP*GP*TP*CP*TP*TP*CP*GP*GP*CP*AP*AP*TP*T)-3'); COMPND 16 CHAIN: F; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 16 ORGANISM_COMMON: MOUSE; SOURCE 17 ORGANISM_TAXID: 10090 KEYWDS INHIBITOR, CGAS, STING, IMMUNE SYSTEM-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.VINCENT,C.ADURA,P.GAO,A.LUZ,L.LAMA,Y.ASANO,R.OKAMOTO,T.IMAEDA, AUTHOR 2 J.AIDA,K.ROTHAMEL,T.GOGAKOS,J.STEINBERG,S.REASONER,K.ASO,T.TUSCHL, AUTHOR 3 D.J.PATEL,J.F.GLICKMAN,M.ASCANO REVDAT 3 13-MAR-24 5XZG 1 REMARK REVDAT 2 01-JAN-20 5XZG 1 REMARK REVDAT 1 11-OCT-17 5XZG 0 JRNL AUTH J.VINCENT,C.ADURA,P.GAO,A.LUZ,L.LAMA,Y.ASANO,R.OKAMOTO, JRNL AUTH 2 T.IMAEDA,J.AIDA,K.ROTHAMEL,T.GOGAKOS,J.STEINBERG,S.REASONER, JRNL AUTH 3 K.ASO,T.TUSCHL,D.J.PATEL,J.F.GLICKMAN,M.ASCANO JRNL TITL SMALL MOLECULE INHIBITION OF CGAS REDUCES INTERFERON JRNL TITL 2 EXPRESSION IN PRIMARY MACROPHAGES FROM AUTOIMMUNE MICE. JRNL REF NAT COMMUN V. 8 750 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28963528 JRNL DOI 10.1038/S41467-017-00833-9 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 45239 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2328 - 4.6053 0.97 2983 175 0.1515 0.1920 REMARK 3 2 4.6053 - 3.6557 0.97 2893 151 0.1556 0.1778 REMARK 3 3 3.6557 - 3.1937 0.98 2888 144 0.1864 0.2029 REMARK 3 4 3.1937 - 2.9018 0.99 2909 136 0.2101 0.2731 REMARK 3 5 2.9018 - 2.6938 1.00 2919 150 0.2191 0.2623 REMARK 3 6 2.6938 - 2.5350 1.00 2876 160 0.2092 0.2574 REMARK 3 7 2.5350 - 2.4080 0.99 2845 178 0.2064 0.2691 REMARK 3 8 2.4080 - 2.3032 1.00 2890 141 0.2052 0.2411 REMARK 3 9 2.3032 - 2.2145 0.83 2389 135 0.2943 0.3645 REMARK 3 10 2.2145 - 2.1381 1.00 2858 156 0.2256 0.2908 REMARK 3 11 2.1381 - 2.0713 1.00 2916 134 0.2387 0.2893 REMARK 3 12 2.0713 - 2.0121 0.99 2822 160 0.2570 0.2805 REMARK 3 13 2.0121 - 1.9591 1.00 2860 158 0.2746 0.2913 REMARK 3 14 1.9591 - 1.9113 0.69 2020 89 0.4010 0.4729 REMARK 3 15 1.9113 - 1.8678 0.49 1411 81 0.3979 0.4562 REMARK 3 16 1.8678 - 1.8281 0.86 2487 125 0.3799 0.3936 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3696 REMARK 3 ANGLE : 1.153 5099 REMARK 3 CHIRALITY : 0.044 549 REMARK 3 PLANARITY : 0.005 545 REMARK 3 DIHEDRAL : 19.623 1466 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 184.9208 215.9014 166.5010 REMARK 3 T TENSOR REMARK 3 T11: 0.3376 T22: 0.2761 REMARK 3 T33: 0.3607 T12: -0.0452 REMARK 3 T13: 0.0480 T23: 0.0528 REMARK 3 L TENSOR REMARK 3 L11: 1.8609 L22: 2.1186 REMARK 3 L33: 3.9557 L12: -0.3495 REMARK 3 L13: 0.3254 L23: 0.4284 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: 0.2001 S13: 0.3779 REMARK 3 S21: -0.1647 S22: -0.1272 S23: 0.0594 REMARK 3 S31: -0.1440 S32: 0.0602 S33: 0.0768 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 376 ) REMARK 3 ORIGIN FOR THE GROUP (A): 193.0696 202.3093 161.7675 REMARK 3 T TENSOR REMARK 3 T11: 0.3196 T22: 0.3538 REMARK 3 T33: 0.2858 T12: 0.0192 REMARK 3 T13: 0.0656 T23: 0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.9184 L22: 2.7534 REMARK 3 L33: 2.0420 L12: 0.4103 REMARK 3 L13: -0.2975 L23: -1.2046 REMARK 3 S TENSOR REMARK 3 S11: 0.0217 S12: 0.3226 S13: -0.0201 REMARK 3 S21: -0.4808 S22: -0.1968 S23: -0.3652 REMARK 3 S31: 0.0585 S32: 0.3940 S33: 0.1413 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 377 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): 193.4792 205.7764 186.2236 REMARK 3 T TENSOR REMARK 3 T11: 0.2951 T22: 0.4001 REMARK 3 T33: 0.3256 T12: -0.0467 REMARK 3 T13: -0.0104 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 2.7067 L22: 2.5450 REMARK 3 L33: 1.8099 L12: 0.1058 REMARK 3 L13: 0.5038 L23: 1.0549 REMARK 3 S TENSOR REMARK 3 S11: 0.0245 S12: -0.4588 S13: 0.2212 REMARK 3 S21: 0.1522 S22: 0.0687 S23: -0.3534 REMARK 3 S31: -0.0851 S32: 0.3639 S33: -0.0941 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 169.4770 216.8646 169.1001 REMARK 3 T TENSOR REMARK 3 T11: 0.5079 T22: 0.4141 REMARK 3 T33: 0.4298 T12: 0.0385 REMARK 3 T13: 0.1066 T23: 0.0541 REMARK 3 L TENSOR REMARK 3 L11: 5.8036 L22: 3.4978 REMARK 3 L33: 2.2629 L12: -0.0542 REMARK 3 L13: -0.9416 L23: -0.7640 REMARK 3 S TENSOR REMARK 3 S11: 0.2961 S12: 0.7936 S13: 0.4163 REMARK 3 S21: -0.5247 S22: 0.2603 S23: -0.0612 REMARK 3 S31: -0.5574 S32: -0.3023 S33: -0.3801 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 4 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 167.8426 215.3753 170.6108 REMARK 3 T TENSOR REMARK 3 T11: 0.4512 T22: 0.5795 REMARK 3 T33: 0.3725 T12: -0.0542 REMARK 3 T13: -0.0133 T23: 0.1266 REMARK 3 L TENSOR REMARK 3 L11: 4.5787 L22: 5.3173 REMARK 3 L33: 4.5717 L12: 0.1300 REMARK 3 L13: 0.7427 L23: 2.4099 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: 0.0248 S13: 0.3502 REMARK 3 S21: -0.1184 S22: 0.0741 S23: 0.1748 REMARK 3 S31: 0.1850 S32: -1.3338 S33: -0.0752 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XZG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004422. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45239 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.828 REMARK 200 RESOLUTION RANGE LOW (A) : 49.215 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, PH 6.9, 22.5% PEG400, 0.08 REMARK 280 M MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.78100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.21500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.18600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.78100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.21500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.18600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.78100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.21500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.18600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.78100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.21500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.18600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 777 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 146 REMARK 465 PRO A 147 REMARK 465 ASP A 148 REMARK 465 LYS A 506 REMARK 465 LEU A 507 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 241 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 242 CG1 CG2 CD1 REMARK 470 ARG A 244 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 183 O LYS A 190 2.10 REMARK 500 N2 DG E 6 O2 DC F 13 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA E 10 O3' DA E 11 P -0.075 REMARK 500 DA E 11 O3' DG E 12 P -0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 243 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 DA F 14 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 185 -173.56 -58.87 REMARK 500 GLU A 186 -55.04 53.23 REMARK 500 SER A 187 119.20 -36.36 REMARK 500 SER A 207 -53.02 74.06 REMARK 500 ARG A 222 80.38 50.52 REMARK 500 TYR A 229 -128.16 49.04 REMARK 500 LYS A 240 -73.64 -63.06 REMARK 500 ARG A 241 -121.99 -87.03 REMARK 500 ILE A 242 117.36 -165.10 REMARK 500 PRO A 243 35.57 -89.65 REMARK 500 ARG A 244 -115.14 47.02 REMARK 500 PHE A 504 6.72 -63.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 378 NE2 REMARK 620 2 CYS A 384 SG 109.9 REMARK 620 3 CYS A 385 SG 105.2 131.7 REMARK 620 4 CYS A 392 SG 97.9 102.9 104.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AEV A 602 DBREF 5XZG A 147 507 UNP Q8C6L5 CGAS_MOUSE 147 507 DBREF 5XZG E 1 15 PDB 5XZG 5XZG 1 15 DBREF 5XZG F 4 17 PDB 5XZG 5XZG 4 17 SEQADV 5XZG SER A 146 UNP Q8C6L5 EXPRESSION TAG SEQRES 1 A 362 SER PRO ASP LYS LEU LYS LYS VAL LEU ASP LYS LEU ARG SEQRES 2 A 362 LEU LYS ARG LYS ASP ILE SER GLU ALA ALA GLU THR VAL SEQRES 3 A 362 ASN LYS VAL VAL GLU ARG LEU LEU ARG ARG MET GLN LYS SEQRES 4 A 362 ARG GLU SER GLU PHE LYS GLY VAL GLU GLN LEU ASN THR SEQRES 5 A 362 GLY SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN SEQRES 6 A 362 GLU PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE SEQRES 7 A 362 GLU LEU GLN GLU TYR TYR GLU THR GLY ALA PHE TYR LEU SEQRES 8 A 362 VAL LYS PHE LYS ARG ILE PRO ARG GLY ASN PRO LEU SER SEQRES 9 A 362 HIS PHE LEU GLU GLY GLU VAL LEU SER ALA THR LYS MET SEQRES 10 A 362 LEU SER LYS PHE ARG LYS ILE ILE LYS GLU GLU VAL LYS SEQRES 11 A 362 GLU ILE LYS ASP ILE ASP VAL SER VAL GLU LYS GLU LYS SEQRES 12 A 362 PRO GLY SER PRO ALA VAL THR LEU LEU ILE ARG ASN PRO SEQRES 13 A 362 GLU GLU ILE SER VAL ASP ILE ILE LEU ALA LEU GLU SER SEQRES 14 A 362 LYS GLY SER TRP PRO ILE SER THR LYS GLU GLY LEU PRO SEQRES 15 A 362 ILE GLN GLY TRP LEU GLY THR LYS VAL ARG THR ASN LEU SEQRES 16 A 362 ARG ARG GLU PRO PHE TYR LEU VAL PRO LYS ASN ALA LYS SEQRES 17 A 362 ASP GLY ASN SER PHE GLN GLY GLU THR TRP ARG LEU SER SEQRES 18 A 362 PHE SER HIS THR GLU LYS TYR ILE LEU ASN ASN HIS GLY SEQRES 19 A 362 ILE GLU LYS THR CYS CYS GLU SER SER GLY ALA LYS CYS SEQRES 20 A 362 CYS ARG LYS GLU CYS LEU LYS LEU MET LYS TYR LEU LEU SEQRES 21 A 362 GLU GLN LEU LYS LYS GLU PHE GLN GLU LEU ASP ALA PHE SEQRES 22 A 362 CYS SER TYR HIS VAL LYS THR ALA ILE PHE HIS MET TRP SEQRES 23 A 362 THR GLN ASP PRO GLN ASP SER GLN TRP ASP PRO ARG ASN SEQRES 24 A 362 LEU SER SER CYS PHE ASP LYS LEU LEU ALA PHE PHE LEU SEQRES 25 A 362 GLU CYS LEU ARG THR GLU LYS LEU ASP HIS TYR PHE ILE SEQRES 26 A 362 PRO LYS PHE ASN LEU PHE SER GLN GLU LEU ILE ASP ARG SEQRES 27 A 362 LYS SER LYS GLU PHE LEU SER LYS LYS ILE GLU TYR GLU SEQRES 28 A 362 ARG ASN ASN GLY PHE PRO ILE PHE ASP LYS LEU SEQRES 1 E 15 DA DA DA DT DT DG DC DC DG DA DA DG DA SEQRES 2 E 15 DC DG SEQRES 1 F 14 DC DG DT DC DT DT DC DG DG DC DA DA DT SEQRES 2 F 14 DT HET ZN A 601 1 HET AEV A 602 28 HETNAM ZN ZINC ION HETNAM AEV 2-(4,5-DICHLORO-1H-BENZIMIDAZOL-2-YL)-5-METHYL-4-[(1R)- HETNAM 2 AEV 3-OXO-1,3-DIHYDRO-2-BENZOFURAN-1-YL]-1,2-DIHYDRO-3H- HETNAM 3 AEV PYRAZOL-3-ONE FORMUL 4 ZN ZN 2+ FORMUL 5 AEV C19 H12 CL2 N4 O3 FORMUL 6 HOH *180(H2 O) HELIX 1 AA1 LYS A 149 ARG A 158 1 10 HELIX 2 AA2 LYS A 160 LYS A 184 1 25 HELIX 3 AA3 ASN A 246 HIS A 250 5 5 HELIX 4 AA4 SER A 258 GLU A 276 1 19 HELIX 5 AA5 PRO A 319 LYS A 323 5 5 HELIX 6 AA6 GLY A 333 ARG A 342 1 10 HELIX 7 AA7 PHE A 367 ASN A 377 1 11 HELIX 8 AA8 CYS A 393 PHE A 412 1 20 HELIX 9 AA9 GLN A 413 ASP A 416 5 4 HELIX 10 AB1 CYS A 419 ASP A 434 1 16 HELIX 11 AB2 GLN A 436 ARG A 443 5 8 HELIX 12 AB3 ASN A 444 GLU A 463 1 20 HELIX 13 AB4 ASP A 482 ASN A 499 1 18 HELIX 14 AB5 PHE A 501 ASP A 505 5 5 SHEET 1 AA1 7 GLU A 193 THR A 197 0 SHEET 2 AA1 7 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA1 7 GLU A 303 SER A 314 1 O ALA A 311 N LEU A 218 SHEET 4 AA1 7 PHE A 345 VAL A 348 -1 O LEU A 347 N LEU A 312 SHEET 5 AA1 7 TRP A 363 SER A 366 -1 O ARG A 364 N VAL A 348 SHEET 6 AA1 7 PHE A 234 PHE A 239 -1 N TYR A 235 O TRP A 363 SHEET 7 AA1 7 ILE A 223 GLU A 227 -1 N GLU A 224 O LYS A 238 SHEET 1 AA2 5 GLU A 193 THR A 197 0 SHEET 2 AA2 5 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA2 5 GLU A 303 SER A 314 1 O ALA A 311 N LEU A 218 SHEET 4 AA2 5 ALA A 293 ARG A 299 -1 N ILE A 298 O ILE A 304 SHEET 5 AA2 5 ASP A 281 VAL A 284 -1 N SER A 283 O LEU A 297 SHEET 1 AA3 2 LEU A 252 GLU A 253 0 SHEET 2 AA3 2 VAL A 256 LEU A 257 -1 O VAL A 256 N GLU A 253 LINK NE2 HIS A 378 ZN ZN A 601 1555 1555 2.05 LINK SG CYS A 384 ZN ZN A 601 1555 1555 2.28 LINK SG CYS A 385 ZN ZN A 601 1555 1555 2.35 LINK SG CYS A 392 ZN ZN A 601 1555 1555 2.40 CISPEP 1 ASN A 300 PRO A 301 0 10.81 SITE 1 AC1 4 HIS A 378 CYS A 384 CYS A 385 CYS A 392 SITE 1 AC2 13 ALA A 233 ARG A 364 LEU A 365 CYS A 419 SITE 2 AC2 13 TYR A 421 HIS A 422 HIS A 467 ILE A 470 SITE 3 AC2 13 PHE A 473 HOH A 749 HOH A 758 HOH A 771 SITE 4 AC2 13 HOH A 785 CRYST1 85.562 98.430 130.372 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011687 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010160 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007670 0.00000