HEADER HYDROLASE 18-JUL-17 5Y0V TITLE CRYSTAL STRUCTURE OF INSECT BETA-N-ACETYL-D-HEXOSAMINIDASE OFHEX1 TITLE 2 COMPLEXED WITH BERBERINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-HEXOSAMINIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.52; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OSTRINIA FURNACALIS; SOURCE 3 ORGANISM_COMMON: ASIAN CORN BORER; SOURCE 4 ORGANISM_TAXID: 93504; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS GS115; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 644223; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: GS115 KEYWDS OSTRINIA FURNACALIS, BERBERINE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.W.DUAN,T.LIU,J.Y.TANG,M.LI,Q.YANG REVDAT 5 09-OCT-24 5Y0V 1 REMARK REVDAT 4 22-NOV-23 5Y0V 1 HETSYN REVDAT 3 29-JUL-20 5Y0V 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 17-OCT-18 5Y0V 1 JRNL REVDAT 1 24-JAN-18 5Y0V 0 JRNL AUTH Y.DUAN,T.LIU,Y.ZHOU,T.DOU,Q.YANG JRNL TITL GLYCOSIDE HYDROLASE FAMILY 18 AND 20 ENZYMES ARE NOVEL JRNL TITL 2 TARGETS OF THE TRADITIONAL MEDICINE BERBERINE. JRNL REF J. BIOL. CHEM. V. 293 15429 2018 JRNL REFN ESSN 1083-351X JRNL PMID 30135205 JRNL DOI 10.1074/JBC.RA118.004351 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.2 REMARK 3 NUMBER OF REFLECTIONS : 41157 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 3463 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.6405 - 7.0729 0.96 3153 167 0.1673 0.1896 REMARK 3 2 7.0729 - 5.6190 1.00 3289 168 0.1730 0.1815 REMARK 3 3 5.6190 - 4.9102 1.00 3261 160 0.1532 0.1582 REMARK 3 4 4.9102 - 4.4620 1.00 3276 168 0.1391 0.1507 REMARK 3 5 4.4620 - 4.1425 1.00 3254 172 0.1388 0.1546 REMARK 3 6 4.1425 - 3.8985 1.00 3344 168 0.1474 0.1752 REMARK 3 7 3.8985 - 3.7034 1.00 3274 153 0.1617 0.1786 REMARK 3 8 3.7034 - 3.5423 1.00 3318 170 0.1711 0.1980 REMARK 3 9 3.5423 - 3.4060 1.00 3290 162 0.1820 0.2022 REMARK 3 10 3.4060 - 3.2885 1.00 3298 161 0.1915 0.2615 REMARK 3 11 3.2885 - 3.1858 1.00 3245 174 0.2096 0.2589 REMARK 3 12 3.1858 - 3.0947 1.00 3289 164 0.2134 0.2034 REMARK 3 13 3.0947 - 3.0133 0.99 3226 163 0.2196 0.2486 REMARK 3 14 3.0133 - 2.9398 0.96 3137 168 0.2055 0.2228 REMARK 3 15 2.9398 - 2.8730 0.91 3017 144 0.2178 0.2847 REMARK 3 16 2.8730 - 2.8119 0.86 2840 139 0.2072 0.2610 REMARK 3 17 2.8119 - 2.7556 0.82 2708 133 0.2198 0.2220 REMARK 3 18 2.7556 - 2.7036 0.78 2535 128 0.2261 0.3085 REMARK 3 19 2.7036 - 2.6554 0.73 2439 129 0.2394 0.2124 REMARK 3 20 2.6554 - 2.6104 0.66 2189 108 0.2305 0.2868 REMARK 3 21 2.6104 - 2.5683 0.56 1828 82 0.2171 0.2574 REMARK 3 22 2.5683 - 2.5288 0.45 1489 86 0.2215 0.2502 REMARK 3 23 2.5288 - 2.4916 0.42 1366 69 0.2121 0.2842 REMARK 3 24 2.4916 - 2.4565 0.38 1258 69 0.2273 0.2429 REMARK 3 25 2.4565 - 2.4233 0.34 1132 58 0.2396 0.3516 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4817 REMARK 3 ANGLE : 0.584 6553 REMARK 3 CHIRALITY : 0.043 691 REMARK 3 PLANARITY : 0.003 838 REMARK 3 DIHEDRAL : 8.436 2845 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE FACTOR FILE CONTAINS REMARK 3 FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 5Y0V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004472. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97775 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41233 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.420 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.50 REMARK 200 R MERGE FOR SHELL (I) : 0.79200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3NSM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES, 200MM MGCL2, 30% PEG 400, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.73200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.36600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 58.36600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 116.73200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 595 REMARK 465 HIS A 596 REMARK 465 HIS A 597 REMARK 465 HIS A 598 REMARK 465 HIS A 599 REMARK 465 HIS A 600 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 999 O HOH A 1020 1.84 REMARK 500 NZ LYS A 265 O HOH A 801 1.88 REMARK 500 O HOH A 1017 O HOH A 1028 1.90 REMARK 500 O HOH A 1013 O HOH A 1022 1.91 REMARK 500 O HOH A 968 O HOH A 970 1.92 REMARK 500 O HOH A 822 O HOH A 896 1.93 REMARK 500 O HOH A 873 O HOH A 1019 1.95 REMARK 500 O HOH A 978 O HOH A 984 1.96 REMARK 500 OE1 GLN A 455 O HOH A 802 1.98 REMARK 500 O SER A 594 O HOH A 803 2.04 REMARK 500 O HOH A 995 O HOH A 1016 2.05 REMARK 500 O ILE A 82 O HOH A 804 2.07 REMARK 500 O HOH A 994 O HOH A 1023 2.10 REMARK 500 O HOH A 1009 O HOH A 1015 2.10 REMARK 500 OD2 ASP A 99 O HOH A 805 2.12 REMARK 500 O ARG A 199 O HOH A 806 2.13 REMARK 500 OE1 GLU A 568 O HOH A 807 2.14 REMARK 500 O HOH A 860 O HOH A 985 2.14 REMARK 500 OD2 ASP A 189 O HOH A 808 2.15 REMARK 500 O HOH A 1006 O HOH A 1018 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 878 O HOH A 1010 5555 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 118 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 86 41.43 -109.38 REMARK 500 PRO A 138 1.42 -66.89 REMARK 500 LYS A 141 21.97 -147.53 REMARK 500 ASP A 161 28.37 -144.50 REMARK 500 ASP A 249 -167.87 -169.57 REMARK 500 ASP A 390 -163.56 -100.57 REMARK 500 LYS A 417 144.96 -172.91 REMARK 500 SER A 469 48.31 -141.13 REMARK 500 LEU A 510 -119.18 60.45 REMARK 500 ASP A 529 -157.87 -151.51 REMARK 500 REMARK 500 REMARK: NULL DBREF 5Y0V A 23 594 UNP Q06GJ0 Q06GJ0_OSTFU 23 594 SEQADV 5Y0V ASP A 243 UNP Q06GJ0 PHE 243 ENGINEERED MUTATION SEQADV 5Y0V PHE A 570 UNP Q06GJ0 LEU 570 ENGINEERED MUTATION SEQADV 5Y0V HIS A 595 UNP Q06GJ0 EXPRESSION TAG SEQADV 5Y0V HIS A 596 UNP Q06GJ0 EXPRESSION TAG SEQADV 5Y0V HIS A 597 UNP Q06GJ0 EXPRESSION TAG SEQADV 5Y0V HIS A 598 UNP Q06GJ0 EXPRESSION TAG SEQADV 5Y0V HIS A 599 UNP Q06GJ0 EXPRESSION TAG SEQADV 5Y0V HIS A 600 UNP Q06GJ0 EXPRESSION TAG SEQRES 1 A 578 GLU ASP VAL VAL TRP ARG TRP SER CYS ASP ASN GLY LYS SEQRES 2 A 578 CYS VAL LYS LEU LYS ASN ASP PRO ARG SER SER GLU PRO SEQRES 3 A 578 ALA LEU SER LEU GLU ALA CYS LYS MET PHE CYS ASN GLU SEQRES 4 A 578 TYR GLY LEU LEU TRP PRO ARG PRO THR GLY GLU ALA ASP SEQRES 5 A 578 LEU GLY ASN PHE LEU SER LYS ILE ASN LEU ASN SER ILE SEQRES 6 A 578 GLU VAL LYS ILE LEU LYS LYS GLY ALA THR ASP ASP LEU SEQRES 7 A 578 MET GLU ALA ALA ALA LYS ARG PHE LYS GLU GLN VAL SER SEQRES 8 A 578 LEU ALA ILE PRO ARG GLY SER THR PRO LYS LEU THR GLY SEQRES 9 A 578 LYS ALA VAL ASP VAL TYR LEU VAL ASN GLU ASN PRO ASN SEQRES 10 A 578 GLU LYS ALA PHE SER LEU GLU MET ASP GLU SER TYR GLY SEQRES 11 A 578 LEU ARG VAL SER PRO SER GLY ALA ASP ARG VAL ASN ALA SEQRES 12 A 578 THR ILE THR ALA ASN SER PHE PHE GLY MET ARG HIS GLY SEQRES 13 A 578 LEU GLU THR LEU SER GLN LEU PHE VAL PHE ASP ASP ILE SEQRES 14 A 578 ARG ASP HIS LEU LEU MET VAL ARG ASP VAL ASN ILE SER SEQRES 15 A 578 ASP LYS PRO VAL TYR PRO TYR ARG GLY ILE LEU LEU ASP SEQRES 16 A 578 THR ALA ARG ASN TYR TYR SER ILE GLU SER ILE LYS ARG SEQRES 17 A 578 THR ILE GLU ALA MET ALA ALA VAL LYS LEU ASN THR ASP SEQRES 18 A 578 HIS TRP HIS ILE THR ASP SER GLN SER PHE PRO PHE VAL SEQRES 19 A 578 THR THR LYS ARG PRO ASN LEU TYR LYS PHE GLY ALA LEU SEQRES 20 A 578 SER PRO GLN LYS VAL TYR THR LYS ALA ALA ILE ARG GLU SEQRES 21 A 578 VAL VAL ARG PHE GLY LEU GLU ARG GLY VAL ARG VAL LEU SEQRES 22 A 578 PRO GLU PHE ASP ALA PRO ALA HIS VAL GLY GLU GLY TRP SEQRES 23 A 578 GLN ASP THR ASP LEU THR VAL CYS PHE LYS ALA GLU PRO SEQRES 24 A 578 TRP LYS SER TYR CYS VAL GLU PRO PRO CYS GLY GLN LEU SEQRES 25 A 578 ASN PRO THR LYS ASP GLU LEU TYR GLN TYR LEU GLU ASP SEQRES 26 A 578 ILE TYR SER ASP MET ALA GLU VAL PHE ASP THR THR ASP SEQRES 27 A 578 ILE PHE HIS MET GLY GLY ASP GLU VAL SER GLU ALA CYS SEQRES 28 A 578 TRP ASN SER SER ASP SER ILE GLN ASN PHE MET MET GLN SEQRES 29 A 578 ASN ARG TRP ASP LEU ASP LYS GLU SER PHE LEU LYS LEU SEQRES 30 A 578 TRP ASN TYR PHE GLN GLN LYS ALA GLN ASP LYS ALA TYR SEQRES 31 A 578 LYS ALA PHE GLY LYS LYS LEU PRO LEU ILE LEU TRP THR SEQRES 32 A 578 SER THR LEU THR ASN TYR LYS HIS ILE ASP ASP TYR LEU SEQRES 33 A 578 ASN LYS ASP ASP TYR ILE ILE GLN VAL TRP THR THR GLY SEQRES 34 A 578 VAL ASP PRO GLN ILE LYS GLY LEU LEU GLU LYS GLY TYR SEQRES 35 A 578 ARG LEU ILE MET SER ASN TYR ASP ALA LEU TYR PHE ASP SEQRES 36 A 578 CYS GLY TYR GLY ALA TRP VAL GLY ALA GLY ASN ASN TRP SEQRES 37 A 578 CYS SER PRO TYR ILE GLY TRP GLN LYS VAL TYR ASP ASN SEQRES 38 A 578 SER PRO ALA VAL ILE ALA LEU GLU HIS ARG ASP GLN VAL SEQRES 39 A 578 LEU GLY GLY GLU ALA ALA LEU TRP SER GLU GLN SER ASP SEQRES 40 A 578 THR SER THR LEU ASP GLY ARG LEU TRP PRO ARG ALA ALA SEQRES 41 A 578 ALA LEU ALA GLU ARG LEU TRP ALA GLU PRO ALA THR SER SEQRES 42 A 578 TRP GLN ASP ALA GLU TYR ARG MET LEU HIS ILE ARG GLU SEQRES 43 A 578 ARG PHE VAL ARG MET GLY ILE GLN ALA GLU SER LEU GLN SEQRES 44 A 578 PRO GLU TRP CYS TYR GLN ASN GLU GLY TYR CYS TYR SER SEQRES 45 A 578 HIS HIS HIS HIS HIS HIS HET NAG B 1 14 HET NAG B 2 14 HET BER A 701 25 HET NAG A 702 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BER BERBERINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 3 BER C20 H18 N O4 1+ FORMUL 5 HOH *230(H2 O) HELIX 1 AA1 SER A 51 ASN A 60 1 10 HELIX 2 AA2 THR A 97 LEU A 114 1 18 HELIX 3 AA3 SER A 171 GLN A 184 1 14 HELIX 4 AA4 SER A 224 VAL A 238 1 15 HELIX 5 AA5 PRO A 261 ALA A 268 1 8 HELIX 6 AA6 THR A 276 GLU A 289 1 14 HELIX 7 AA7 PRO A 321 TYR A 325 5 5 HELIX 8 AA8 ASP A 339 PHE A 356 1 18 HELIX 9 AA9 SER A 370 SER A 376 1 7 HELIX 10 AB1 SER A 377 ASN A 387 1 11 HELIX 11 AB2 ASP A 392 GLY A 416 1 25 HELIX 12 AB3 HIS A 433 LEU A 438 1 6 HELIX 13 AB4 ASP A 453 LYS A 462 1 10 HELIX 14 AB5 ASN A 470 TYR A 475 1 6 HELIX 15 AB6 GLY A 496 ASN A 503 1 8 HELIX 16 AB7 SER A 504 LEU A 510 1 7 HELIX 17 AB8 GLU A 511 ASP A 514 5 4 HELIX 18 AB9 ASP A 529 SER A 531 5 3 HELIX 19 AC1 THR A 532 TRP A 538 1 7 HELIX 20 AC2 PRO A 539 GLU A 551 1 13 HELIX 21 AC3 SER A 555 MET A 573 1 19 HELIX 22 AC4 PRO A 582 ASN A 588 1 7 SHEET 1 AA1 2 TRP A 27 ASP A 32 0 SHEET 2 AA1 2 LYS A 35 LYS A 40 -1 O LEU A 39 N ARG A 28 SHEET 1 AA2 8 ALA A 73 ASP A 74 0 SHEET 2 AA2 8 VAL A 201 ASP A 205 -1 O ASN A 202 N ASP A 74 SHEET 3 AA2 8 TYR A 151 SER A 158 -1 N LEU A 153 O ILE A 203 SHEET 4 AA2 8 ARG A 162 ALA A 169 -1 O THR A 168 N GLY A 152 SHEET 5 AA2 8 LYS A 127 ASN A 135 1 N ASP A 130 O ALA A 165 SHEET 6 AA2 8 LEU A 79 ILE A 91 1 N LYS A 90 O VAL A 131 SHEET 7 AA2 8 HIS A 194 VAL A 198 -1 O LEU A 195 N ILE A 82 SHEET 8 AA2 8 PHE A 186 ASP A 189 -1 N ASP A 189 O HIS A 194 SHEET 1 AA3 9 TYR A 211 ASP A 217 0 SHEET 2 AA3 9 THR A 242 HIS A 246 1 O HIS A 244 N LEU A 216 SHEET 3 AA3 9 ARG A 293 ALA A 300 1 O ARG A 293 N ASP A 243 SHEET 4 AA3 9 PHE A 362 GLY A 365 1 O HIS A 363 N PRO A 296 SHEET 5 AA3 9 LEU A 421 TRP A 424 1 O ILE A 422 N MET A 364 SHEET 6 AA3 9 TYR A 443 VAL A 447 1 O ILE A 444 N LEU A 421 SHEET 7 AA3 9 ARG A 465 MET A 468 1 O ILE A 467 N VAL A 447 SHEET 8 AA3 9 VAL A 516 LEU A 523 1 O GLY A 518 N MET A 468 SHEET 9 AA3 9 TYR A 211 ASP A 217 1 N LEU A 215 O ALA A 521 SHEET 1 AA4 2 THR A 314 VAL A 315 0 SHEET 2 AA4 2 GLN A 333 LEU A 334 -1 O GLN A 333 N VAL A 315 SSBOND 1 CYS A 31 CYS A 59 1555 1555 2.04 SSBOND 2 CYS A 36 CYS A 55 1555 1555 2.05 SSBOND 3 CYS A 316 CYS A 373 1555 1555 2.13 SSBOND 4 CYS A 326 CYS A 331 1555 1555 2.03 SSBOND 5 CYS A 478 CYS A 491 1555 1555 2.04 SSBOND 6 CYS A 585 CYS A 592 1555 1555 2.04 LINK ND2 ASN A 164 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 375 C1 NAG A 702 1555 1555 1.43 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 CISPEP 1 TRP A 66 PRO A 67 0 -0.93 CISPEP 2 ALA A 300 PRO A 301 0 1.18 CISPEP 3 GLU A 320 PRO A 321 0 -1.04 CISPEP 4 PRO A 329 PRO A 330 0 -0.31 CISPEP 5 SER A 492 PRO A 493 0 6.43 CISPEP 6 TRP A 538 PRO A 539 0 4.90 CRYST1 107.821 107.821 175.098 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009275 0.005355 0.000000 0.00000 SCALE2 0.000000 0.010709 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005711 0.00000