HEADER HYDROLASE 12-AUG-17 5Y6N TITLE ZIKA VIRUS HELICASE IN COMPLEX WITH ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HELICASE DOMAIN FROM GENOME POLYPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1682-2119; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS (STRAIN MR 766); SOURCE 3 ORGANISM_COMMON: ZIKV; SOURCE 4 ORGANISM_TAXID: 64320; SOURCE 5 STRAIN: MR 766; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 536; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 362663; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: 536 KEYWDS ZIKA VIRUS HELICASE, HYDROLYSIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.Y.YANG,C.CHEN,H.L.TIAN,H.CHI,Z.Y.MU,T.Q.ZHANG,K.L.YANG,Q.ZHAO, AUTHOR 2 X.H.LIU,Z.F.WANG,X.Y.JI,H.T.YANG REVDAT 3 22-NOV-23 5Y6N 1 LINK REVDAT 2 17-OCT-18 5Y6N 1 JRNL REVDAT 1 04-JUL-18 5Y6N 0 JRNL AUTH X.YANG,C.CHEN,H.TIAN,H.CHI,Z.MU,T.ZHANG,K.YANG,Q.ZHAO,X.LIU, JRNL AUTH 2 Z.WANG,X.JI,H.YANG JRNL TITL MECHANISM OF ATP HYDROLYSIS BY THE ZIKA VIRUS HELICASE. JRNL REF FASEB J. V. 32 5250 2018 JRNL REFN ESSN 1530-6860 JRNL PMID 29913559 JRNL DOI 10.1096/FJ.201701140R REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2148: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 111281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 5652 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.3539 - 4.8787 1.00 3562 162 0.1816 0.1882 REMARK 3 2 4.8787 - 3.8734 1.00 3634 156 0.1494 0.1453 REMARK 3 3 3.8734 - 3.3840 1.00 3580 170 0.1568 0.1842 REMARK 3 4 3.3840 - 3.0748 1.00 3532 212 0.1650 0.1909 REMARK 3 5 3.0748 - 2.8544 1.00 3560 185 0.1734 0.1768 REMARK 3 6 2.8544 - 2.6862 1.00 3583 164 0.1795 0.2181 REMARK 3 7 2.6862 - 2.5517 1.00 3614 180 0.1808 0.2301 REMARK 3 8 2.5517 - 2.4406 1.00 3551 204 0.1809 0.2107 REMARK 3 9 2.4406 - 2.3467 1.00 3569 172 0.1770 0.1827 REMARK 3 10 2.3467 - 2.2657 1.00 3636 169 0.1710 0.2231 REMARK 3 11 2.2657 - 2.1949 1.00 3471 220 0.1788 0.1866 REMARK 3 12 2.1949 - 2.1321 1.00 3551 222 0.1785 0.1723 REMARK 3 13 2.1321 - 2.0760 1.00 3583 166 0.1779 0.2002 REMARK 3 14 2.0760 - 2.0254 1.00 3543 208 0.1853 0.2130 REMARK 3 15 2.0254 - 1.9793 1.00 3544 202 0.1836 0.2114 REMARK 3 16 1.9793 - 1.9372 1.00 3559 190 0.1849 0.1957 REMARK 3 17 1.9372 - 1.8984 1.00 3521 209 0.1879 0.1887 REMARK 3 18 1.8984 - 1.8626 1.00 3590 208 0.1985 0.2149 REMARK 3 19 1.8626 - 1.8294 1.00 3560 168 0.2066 0.2452 REMARK 3 20 1.8294 - 1.7983 1.00 3573 209 0.2156 0.2293 REMARK 3 21 1.7983 - 1.7693 1.00 3514 196 0.2246 0.2732 REMARK 3 22 1.7693 - 1.7421 1.00 3582 193 0.2444 0.2565 REMARK 3 23 1.7421 - 1.7165 1.00 3559 157 0.2522 0.2483 REMARK 3 24 1.7165 - 1.6923 1.00 3601 173 0.2628 0.2866 REMARK 3 25 1.6923 - 1.6694 1.00 3573 184 0.2610 0.2881 REMARK 3 26 1.6694 - 1.6478 1.00 3537 204 0.2643 0.3322 REMARK 3 27 1.6478 - 1.6272 1.00 3557 212 0.2692 0.3059 REMARK 3 28 1.6272 - 1.6076 1.00 3532 197 0.2785 0.3403 REMARK 3 29 1.6076 - 1.5889 0.99 3546 207 0.2903 0.3126 REMARK 3 30 1.5889 - 1.5710 0.66 2312 153 0.3085 0.3908 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3507 REMARK 3 ANGLE : 0.867 4758 REMARK 3 CHIRALITY : 0.055 526 REMARK 3 PLANARITY : 0.005 612 REMARK 3 DIHEDRAL : 17.257 2122 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 182:617) REMARK 3 ORIGIN FOR THE GROUP (A): 55.6387 -11.4404 81.8535 REMARK 3 T TENSOR REMARK 3 T11: 0.1495 T22: 0.1150 REMARK 3 T33: 0.1404 T12: -0.0053 REMARK 3 T13: 0.0059 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.4410 L22: 0.6800 REMARK 3 L33: 0.6935 L12: -0.0773 REMARK 3 L13: -0.0004 L23: -0.0741 REMARK 3 S TENSOR REMARK 3 S11: -0.0217 S12: 0.0359 S13: -0.1141 REMARK 3 S21: 0.1418 S22: 0.0041 S23: 0.0182 REMARK 3 S31: -0.0348 S32: 0.0747 S33: 0.0018 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE SF FILE CONTAINS BIJVOET PAIRS REMARK 3 (FOBS+ AND FOBS-) REMARK 4 REMARK 4 5Y6N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1300004069. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97776 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 111281 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.99000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5GJC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE (PH 7.0), 20% V/V REMARK 280 JEFFAMINE ED-2001, MICROBATCH, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.46700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 180 REMARK 465 PRO A 181 REMARK 465 ALA A 247 REMARK 465 VAL A 248 REMARK 465 ASN A 249 REMARK 465 VAL A 250 REMARK 465 THR A 251 REMARK 465 HIS A 252 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 186 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1083 O HOH A 1142 1.82 REMARK 500 O HOH A 1141 O HOH A 1142 1.87 REMARK 500 O HOH A 855 O HOH A 1029 1.90 REMARK 500 OG1 THR A 246 O HOH A 801 1.94 REMARK 500 O HOH A 1075 O HOH A 1113 1.96 REMARK 500 O HOH A 999 O HOH A 1059 2.08 REMARK 500 OH TYR A 243 O HOH A 802 2.09 REMARK 500 O HOH A 999 O HOH A 1119 2.10 REMARK 500 OE1 GLU A 231 O HOH A 803 2.12 REMARK 500 O LYS A 523 O HOH A 804 2.14 REMARK 500 O HOH A 1010 O HOH A 1122 2.15 REMARK 500 OG1 THR A 566 O HOH A 805 2.16 REMARK 500 O HOH A 923 O HOH A 1024 2.16 REMARK 500 O HOH A 817 O HOH A 1143 2.17 REMARK 500 OE1 GLU A 521 O HOH A 806 2.18 REMARK 500 O HOH A 1006 O HOH A 1049 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 275 OE2 GLU A 438 2848 1.67 REMARK 500 NH1 ARG A 275 CB ASP A 436 2848 1.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 278 46.24 74.21 REMARK 500 THR A 316 137.97 -170.18 REMARK 500 MET A 414 67.90 -104.73 REMARK 500 ASP A 574 58.97 33.61 REMARK 500 LYS A 591 77.16 -152.68 REMARK 500 CYS A 600 27.38 -141.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 701 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 201 OG1 REMARK 620 2 GLU A 286 OE2 89.6 REMARK 620 3 ADP A 702 O3B 88.5 178.1 REMARK 620 4 HOH A 846 O 92.6 94.4 85.9 REMARK 620 5 HOH A 849 O 87.8 86.6 93.1 179.0 REMARK 620 6 HOH A 854 O 178.1 90.2 91.7 85.5 94.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 702 DBREF1 5Y6N A 180 617 UNP A0A140GMI3_ZIKV DBREF2 5Y6N A A0A140GMI3 1682 2119 SEQRES 1 A 438 GLU PRO SER MET LEU LYS LYS LYS GLN LEU THR VAL LEU SEQRES 2 A 438 ASP LEU HIS PRO GLY ALA GLY LYS THR ARG ARG VAL LEU SEQRES 3 A 438 PRO GLU ILE VAL ARG GLU ALA ILE LYS THR ARG LEU ARG SEQRES 4 A 438 THR VAL ILE LEU ALA PRO THR ARG VAL VAL ALA ALA GLU SEQRES 5 A 438 MET GLU GLU ALA LEU ARG GLY LEU PRO VAL ARG TYR MET SEQRES 6 A 438 THR THR ALA VAL ASN VAL THR HIS SER GLY THR GLU ILE SEQRES 7 A 438 VAL ASP LEU MET CYS HIS ALA THR PHE THR SER ARG LEU SEQRES 8 A 438 LEU GLN PRO ILE ARG VAL PRO ASN TYR ASN LEU TYR ILE SEQRES 9 A 438 MET ASP GLU ALA HIS PHE THR ASP PRO SER SER ILE ALA SEQRES 10 A 438 ALA ARG GLY TYR ILE SER THR ARG VAL GLU MET GLY GLU SEQRES 11 A 438 ALA ALA ALA ILE PHE MET THR ALA THR PRO PRO GLY THR SEQRES 12 A 438 ARG ASP ALA PHE PRO ASP SER ASN SER PRO ILE MET ASP SEQRES 13 A 438 THR GLU VAL GLU VAL PRO GLU ARG ALA TRP SER SER GLY SEQRES 14 A 438 PHE ASP TRP VAL THR ASP HIS SER GLY LYS THR VAL TRP SEQRES 15 A 438 PHE VAL PRO SER VAL ARG ASN GLY ASN GLU ILE ALA ALA SEQRES 16 A 438 CYS LEU THR LYS ALA GLY LYS ARG VAL ILE GLN LEU SER SEQRES 17 A 438 ARG LYS THR PHE GLU THR GLU PHE GLN LYS THR LYS HIS SEQRES 18 A 438 GLN GLU TRP ASP PHE VAL VAL THR THR ASP ILE SER GLU SEQRES 19 A 438 MET GLY ALA ASN PHE LYS ALA ASP ARG VAL ILE ASP SER SEQRES 20 A 438 ARG ARG CYS LEU LYS PRO VAL ILE LEU ASP GLY GLU ARG SEQRES 21 A 438 VAL ILE LEU ALA GLY PRO MET PRO VAL THR HIS ALA SER SEQRES 22 A 438 ALA ALA GLN ARG ARG GLY ARG ILE GLY ARG ASN PRO ASN SEQRES 23 A 438 LYS PRO GLY ASP GLU TYR LEU TYR GLY GLY GLY CYS ALA SEQRES 24 A 438 GLU THR ASP GLU ASP HIS ALA HIS TRP LEU GLU ALA ARG SEQRES 25 A 438 MET LEU LEU ASP ASN ILE TYR LEU GLN ASP GLY LEU ILE SEQRES 26 A 438 ALA SER LEU TYR ARG PRO GLU ALA ASP LYS VAL ALA ALA SEQRES 27 A 438 ILE GLU GLY GLU PHE LYS LEU ARG THR GLU GLN ARG LYS SEQRES 28 A 438 THR PHE VAL GLU LEU MET LYS ARG GLY ASP LEU PRO VAL SEQRES 29 A 438 TRP LEU ALA TYR GLN VAL ALA SER ALA GLY ILE THR TYR SEQRES 30 A 438 THR ASP ARG ARG TRP CYS PHE ASP GLY THR THR ASN ASN SEQRES 31 A 438 THR ILE MET GLU ASP SER VAL PRO ALA GLU VAL TRP THR SEQRES 32 A 438 ARG HIS GLY GLU LYS ARG VAL LEU LYS PRO ARG TRP MET SEQRES 33 A 438 ASP ALA ARG VAL CYS SER ASP HIS ALA ALA LEU LYS SER SEQRES 34 A 438 PHE LYS GLU PHE ALA ALA GLY LYS ARG HET MN A 701 1 HET ADP A 702 27 HETNAM MN MANGANESE (II) ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 MN MN 2+ FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 HOH *353(H2 O) HELIX 1 AA1 SER A 182 LYS A 186 5 5 HELIX 2 AA2 ARG A 203 THR A 215 1 13 HELIX 3 AA3 THR A 225 LEU A 236 1 12 HELIX 4 AA4 HIS A 263 GLN A 272 1 10 HELIX 5 AA5 ASP A 291 MET A 307 1 17 HELIX 6 AA6 PHE A 349 ASP A 354 1 6 HELIX 7 AA7 SER A 365 ALA A 379 1 15 HELIX 8 AA8 THR A 390 GLN A 396 1 7 HELIX 9 AA9 LYS A 397 HIS A 400 5 4 HELIX 10 AB1 ASP A 410 MET A 414 5 5 HELIX 11 AB2 THR A 449 GLY A 458 1 10 HELIX 12 AB3 THR A 480 ASP A 483 5 4 HELIX 13 AB4 HIS A 484 ASP A 495 1 12 HELIX 14 AB5 LEU A 499 LEU A 503 5 5 HELIX 15 AB6 TYR A 508 VAL A 515 5 8 HELIX 16 AB7 ARG A 525 ARG A 538 1 14 HELIX 17 AB8 PRO A 542 ALA A 552 1 11 HELIX 18 AB9 ARG A 559 PHE A 563 5 5 HELIX 19 AC1 THR A 566 THR A 570 5 5 HELIX 20 AC2 ARG A 598 CYS A 600 5 3 HELIX 21 AC3 ASP A 602 ALA A 614 1 13 SHEET 1 AA1 6 LEU A 189 LEU A 192 0 SHEET 2 AA1 6 ALA A 311 MET A 315 1 O PHE A 314 N THR A 190 SHEET 3 AA1 6 LEU A 281 ASP A 285 1 N MET A 284 O MET A 315 SHEET 4 AA1 6 THR A 219 ALA A 223 1 N LEU A 222 O ILE A 283 SHEET 5 AA1 6 VAL A 258 CYS A 262 1 O ASP A 259 N ILE A 221 SHEET 6 AA1 6 VAL A 241 TYR A 243 1 N ARG A 242 O VAL A 258 SHEET 1 AA2 6 ILE A 333 GLU A 337 0 SHEET 2 AA2 6 ASP A 469 TYR A 473 1 O ASP A 469 N MET A 334 SHEET 3 AA2 6 ARG A 422 ASP A 425 1 N ASP A 425 O LEU A 472 SHEET 4 AA2 6 THR A 359 PHE A 362 1 N PHE A 362 O ILE A 424 SHEET 5 AA2 6 PHE A 405 THR A 408 1 O VAL A 406 N TRP A 361 SHEET 6 AA2 6 VAL A 383 LEU A 386 1 N ILE A 384 O VAL A 407 SHEET 1 AA3 3 ARG A 428 LEU A 435 0 SHEET 2 AA3 3 ARG A 439 PRO A 447 -1 O ALA A 443 N LYS A 431 SHEET 3 AA3 3 MET A 595 ASP A 596 1 O MET A 595 N VAL A 440 SHEET 1 AA4 2 MET A 572 GLU A 573 0 SHEET 2 AA4 2 VAL A 576 PRO A 577 -1 O VAL A 576 N GLU A 573 SHEET 1 AA5 2 GLU A 579 TRP A 581 0 SHEET 2 AA5 2 LYS A 587 VAL A 589 -1 O ARG A 588 N VAL A 580 LINK OG1 THR A 201 MN MN A 701 1555 1555 2.17 LINK OE2 GLU A 286 MN MN A 701 1555 1555 2.16 LINK MN MN A 701 O3B ADP A 702 1555 1555 2.16 LINK MN MN A 701 O HOH A 846 1555 1555 2.21 LINK MN MN A 701 O HOH A 849 1555 1555 2.26 LINK MN MN A 701 O HOH A 854 1555 1555 2.31 SITE 1 AC1 6 THR A 201 GLU A 286 ADP A 702 HOH A 846 SITE 2 AC1 6 HOH A 849 HOH A 854 SITE 1 AC2 16 GLY A 197 ALA A 198 GLY A 199 LYS A 200 SITE 2 AC2 16 THR A 201 ARG A 202 ASN A 330 ARG A 462 SITE 3 AC2 16 MN A 701 HOH A 846 HOH A 854 HOH A 878 SITE 4 AC2 16 HOH A 881 HOH A 979 HOH A1024 HOH A1032 CRYST1 63.275 52.934 64.483 90.00 104.93 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015804 0.000000 0.004215 0.00000 SCALE2 0.000000 0.018891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016050 0.00000