data_5Y93 # _entry.id 5Y93 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5Y93 pdb_00005y93 10.2210/pdb5y93/pdb WWPDB D_1300004856 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-13 2 'Structure model' 1 1 2019-12-04 3 'Structure model' 1 2 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' reflns_shell 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5Y93 _pdbx_database_status.recvd_initial_deposition_date 2017-08-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xu, Y.' 1 ? 'Zhang, Y.' 2 ? 'Song, M.' 3 ? 'Wang, C.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Med. Chem.' _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 1520-4804 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 61 _citation.language ? _citation.page_first 3037 _citation.page_last 3058 _citation.title ;Structure-Based Discovery and Optimization of Benzo[ d]isoxazole Derivatives as Potent and Selective BET Inhibitors for Potential Treatment of Castration-Resistant Prostate Cancer (CRPC) ; _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.8b00103 _citation.pdbx_database_id_PubMed 29566488 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, M.' 1 ? primary 'Zhang, Y.' 2 ? primary 'Song, M.' 3 ? primary 'Xue, X.' 4 ? primary 'Wang, J.' 5 ? primary 'Wang, C.' 6 ? primary 'Zhang, C.' 7 ? primary 'Li, C.' 8 ? primary 'Xiang, Q.' 9 ? primary 'Zou, L.' 10 ? primary 'Wu, X.' 11 ? primary 'Wu, C.' 12 ? primary 'Dong, B.' 13 ? primary 'Xue, W.' 14 ? primary 'Zhou, Y.' 15 ? primary 'Chen, H.' 16 ? primary 'Wu, D.' 17 ? primary 'Ding, K.' 18 ? primary 'Xu, Y.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 16767.326 1 ? ? 'UNP residues 44-168' ;sequence from 28-43 are tags. MKKGHHHHHHLVPRGS ; 2 non-polymer syn '2-[[5-[(5-bromanyl-2-methoxy-phenyl)sulfonylamino]-3-methyl-1,2-benzoxazol-6-yl]oxy]-N-(2-morpholin-4-ylethyl)ethanamide' 583.452 1 ? ? ? ? 3 non-polymer syn 'NITRATE ION' 62.005 2 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 6 water nat water 18.015 66 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein HUNK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKKGHHHHHHLVPRGSNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_seq_one_letter_code_can ;MKKGHHHHHHLVPRGSNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-[[5-[(5-bromanyl-2-methoxy-phenyl)sulfonylamino]-3-methyl-1,2-benzoxazol-6-yl]oxy]-N-(2-morpholin-4-ylethyl)ethanamide' 8Q9 3 'NITRATE ION' NO3 4 1,2-ETHANEDIOL EDO 5 GLYCEROL GOL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 LYS n 1 4 GLY n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 LEU n 1 12 VAL n 1 13 PRO n 1 14 ARG n 1 15 GLY n 1 16 SER n 1 17 ASN n 1 18 PRO n 1 19 PRO n 1 20 PRO n 1 21 PRO n 1 22 GLU n 1 23 THR n 1 24 SER n 1 25 ASN n 1 26 PRO n 1 27 ASN n 1 28 LYS n 1 29 PRO n 1 30 LYS n 1 31 ARG n 1 32 GLN n 1 33 THR n 1 34 ASN n 1 35 GLN n 1 36 LEU n 1 37 GLN n 1 38 TYR n 1 39 LEU n 1 40 LEU n 1 41 ARG n 1 42 VAL n 1 43 VAL n 1 44 LEU n 1 45 LYS n 1 46 THR n 1 47 LEU n 1 48 TRP n 1 49 LYS n 1 50 HIS n 1 51 GLN n 1 52 PHE n 1 53 ALA n 1 54 TRP n 1 55 PRO n 1 56 PHE n 1 57 GLN n 1 58 GLN n 1 59 PRO n 1 60 VAL n 1 61 ASP n 1 62 ALA n 1 63 VAL n 1 64 LYS n 1 65 LEU n 1 66 ASN n 1 67 LEU n 1 68 PRO n 1 69 ASP n 1 70 TYR n 1 71 TYR n 1 72 LYS n 1 73 ILE n 1 74 ILE n 1 75 LYS n 1 76 THR n 1 77 PRO n 1 78 MET n 1 79 ASP n 1 80 MET n 1 81 GLY n 1 82 THR n 1 83 ILE n 1 84 LYS n 1 85 LYS n 1 86 ARG n 1 87 LEU n 1 88 GLU n 1 89 ASN n 1 90 ASN n 1 91 TYR n 1 92 TYR n 1 93 TRP n 1 94 ASN n 1 95 ALA n 1 96 GLN n 1 97 GLU n 1 98 CYS n 1 99 ILE n 1 100 GLN n 1 101 ASP n 1 102 PHE n 1 103 ASN n 1 104 THR n 1 105 MET n 1 106 PHE n 1 107 THR n 1 108 ASN n 1 109 CYS n 1 110 TYR n 1 111 ILE n 1 112 TYR n 1 113 ASN n 1 114 LYS n 1 115 PRO n 1 116 GLY n 1 117 ASP n 1 118 ASP n 1 119 ILE n 1 120 VAL n 1 121 LEU n 1 122 MET n 1 123 ALA n 1 124 GLU n 1 125 ALA n 1 126 LEU n 1 127 GLU n 1 128 LYS n 1 129 LEU n 1 130 PHE n 1 131 LEU n 1 132 GLN n 1 133 LYS n 1 134 ILE n 1 135 ASN n 1 136 GLU n 1 137 LEU n 1 138 PRO n 1 139 THR n 1 140 GLU n 1 141 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 141 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8Q9 non-polymer . '2-[[5-[(5-bromanyl-2-methoxy-phenyl)sulfonylamino]-3-methyl-1,2-benzoxazol-6-yl]oxy]-N-(2-morpholin-4-ylethyl)ethanamide' ? 'C23 H27 Br N4 O7 S' 583.452 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 28 ? ? ? A . n A 1 2 LYS 2 29 ? ? ? A . n A 1 3 LYS 3 30 ? ? ? A . n A 1 4 GLY 4 31 ? ? ? A . n A 1 5 HIS 5 32 ? ? ? A . n A 1 6 HIS 6 33 33 HIS HIS A . n A 1 7 HIS 7 34 34 HIS HIS A . n A 1 8 HIS 8 35 35 HIS HIS A . n A 1 9 HIS 9 36 36 HIS HIS A . n A 1 10 HIS 10 37 37 HIS HIS A . n A 1 11 LEU 11 38 38 LEU LEU A . n A 1 12 VAL 12 39 39 VAL VAL A . n A 1 13 PRO 13 40 40 PRO PRO A . n A 1 14 ARG 14 41 41 ARG ARG A . n A 1 15 GLY 15 42 42 GLY GLY A . n A 1 16 SER 16 43 43 SER SER A . n A 1 17 ASN 17 44 44 ASN ASN A . n A 1 18 PRO 18 45 45 PRO PRO A . n A 1 19 PRO 19 46 46 PRO PRO A . n A 1 20 PRO 20 47 47 PRO PRO A . n A 1 21 PRO 21 48 48 PRO PRO A . n A 1 22 GLU 22 49 49 GLU GLU A . n A 1 23 THR 23 50 50 THR THR A . n A 1 24 SER 24 51 51 SER SER A . n A 1 25 ASN 25 52 52 ASN ASN A . n A 1 26 PRO 26 53 53 PRO PRO A . n A 1 27 ASN 27 54 54 ASN ASN A . n A 1 28 LYS 28 55 55 LYS LYS A . n A 1 29 PRO 29 56 56 PRO PRO A . n A 1 30 LYS 30 57 57 LYS LYS A . n A 1 31 ARG 31 58 58 ARG ARG A . n A 1 32 GLN 32 59 59 GLN GLN A . n A 1 33 THR 33 60 60 THR THR A . n A 1 34 ASN 34 61 61 ASN ASN A . n A 1 35 GLN 35 62 62 GLN GLN A . n A 1 36 LEU 36 63 63 LEU LEU A . n A 1 37 GLN 37 64 64 GLN GLN A . n A 1 38 TYR 38 65 65 TYR TYR A . n A 1 39 LEU 39 66 66 LEU LEU A . n A 1 40 LEU 40 67 67 LEU LEU A . n A 1 41 ARG 41 68 68 ARG ARG A . n A 1 42 VAL 42 69 69 VAL VAL A . n A 1 43 VAL 43 70 70 VAL VAL A . n A 1 44 LEU 44 71 71 LEU LEU A . n A 1 45 LYS 45 72 72 LYS LYS A . n A 1 46 THR 46 73 73 THR THR A . n A 1 47 LEU 47 74 74 LEU LEU A . n A 1 48 TRP 48 75 75 TRP TRP A . n A 1 49 LYS 49 76 76 LYS LYS A . n A 1 50 HIS 50 77 77 HIS HIS A . n A 1 51 GLN 51 78 78 GLN GLN A . n A 1 52 PHE 52 79 79 PHE PHE A . n A 1 53 ALA 53 80 80 ALA ALA A . n A 1 54 TRP 54 81 81 TRP TRP A . n A 1 55 PRO 55 82 82 PRO PRO A . n A 1 56 PHE 56 83 83 PHE PHE A . n A 1 57 GLN 57 84 84 GLN GLN A . n A 1 58 GLN 58 85 85 GLN GLN A . n A 1 59 PRO 59 86 86 PRO PRO A . n A 1 60 VAL 60 87 87 VAL VAL A . n A 1 61 ASP 61 88 88 ASP ASP A . n A 1 62 ALA 62 89 89 ALA ALA A . n A 1 63 VAL 63 90 90 VAL VAL A . n A 1 64 LYS 64 91 91 LYS LYS A . n A 1 65 LEU 65 92 92 LEU LEU A . n A 1 66 ASN 66 93 93 ASN ASN A . n A 1 67 LEU 67 94 94 LEU LEU A . n A 1 68 PRO 68 95 95 PRO PRO A . n A 1 69 ASP 69 96 96 ASP ASP A . n A 1 70 TYR 70 97 97 TYR TYR A . n A 1 71 TYR 71 98 98 TYR TYR A . n A 1 72 LYS 72 99 99 LYS LYS A . n A 1 73 ILE 73 100 100 ILE ILE A . n A 1 74 ILE 74 101 101 ILE ILE A . n A 1 75 LYS 75 102 102 LYS LYS A . n A 1 76 THR 76 103 103 THR THR A . n A 1 77 PRO 77 104 104 PRO PRO A . n A 1 78 MET 78 105 105 MET MET A . n A 1 79 ASP 79 106 106 ASP ASP A . n A 1 80 MET 80 107 107 MET MET A . n A 1 81 GLY 81 108 108 GLY GLY A . n A 1 82 THR 82 109 109 THR THR A . n A 1 83 ILE 83 110 110 ILE ILE A . n A 1 84 LYS 84 111 111 LYS LYS A . n A 1 85 LYS 85 112 112 LYS LYS A . n A 1 86 ARG 86 113 113 ARG ARG A . n A 1 87 LEU 87 114 114 LEU LEU A . n A 1 88 GLU 88 115 115 GLU GLU A . n A 1 89 ASN 89 116 116 ASN ASN A . n A 1 90 ASN 90 117 117 ASN ASN A . n A 1 91 TYR 91 118 118 TYR TYR A . n A 1 92 TYR 92 119 119 TYR TYR A . n A 1 93 TRP 93 120 120 TRP TRP A . n A 1 94 ASN 94 121 121 ASN ASN A . n A 1 95 ALA 95 122 122 ALA ALA A . n A 1 96 GLN 96 123 123 GLN GLN A . n A 1 97 GLU 97 124 124 GLU GLU A . n A 1 98 CYS 98 125 125 CYS CYS A . n A 1 99 ILE 99 126 126 ILE ILE A . n A 1 100 GLN 100 127 127 GLN GLN A . n A 1 101 ASP 101 128 128 ASP ASP A . n A 1 102 PHE 102 129 129 PHE PHE A . n A 1 103 ASN 103 130 130 ASN ASN A . n A 1 104 THR 104 131 131 THR THR A . n A 1 105 MET 105 132 132 MET MET A . n A 1 106 PHE 106 133 133 PHE PHE A . n A 1 107 THR 107 134 134 THR THR A . n A 1 108 ASN 108 135 135 ASN ASN A . n A 1 109 CYS 109 136 136 CYS CYS A . n A 1 110 TYR 110 137 137 TYR TYR A . n A 1 111 ILE 111 138 138 ILE ILE A . n A 1 112 TYR 112 139 139 TYR TYR A . n A 1 113 ASN 113 140 140 ASN ASN A . n A 1 114 LYS 114 141 141 LYS LYS A . n A 1 115 PRO 115 142 142 PRO PRO A . n A 1 116 GLY 116 143 143 GLY GLY A . n A 1 117 ASP 117 144 144 ASP ASP A . n A 1 118 ASP 118 145 145 ASP ASP A . n A 1 119 ILE 119 146 146 ILE ILE A . n A 1 120 VAL 120 147 147 VAL VAL A . n A 1 121 LEU 121 148 148 LEU LEU A . n A 1 122 MET 122 149 149 MET MET A . n A 1 123 ALA 123 150 150 ALA ALA A . n A 1 124 GLU 124 151 151 GLU GLU A . n A 1 125 ALA 125 152 152 ALA ALA A . n A 1 126 LEU 126 153 153 LEU LEU A . n A 1 127 GLU 127 154 154 GLU GLU A . n A 1 128 LYS 128 155 155 LYS LYS A . n A 1 129 LEU 129 156 156 LEU LEU A . n A 1 130 PHE 130 157 157 PHE PHE A . n A 1 131 LEU 131 158 158 LEU LEU A . n A 1 132 GLN 132 159 159 GLN GLN A . n A 1 133 LYS 133 160 160 LYS LYS A . n A 1 134 ILE 134 161 161 ILE ILE A . n A 1 135 ASN 135 162 162 ASN ASN A . n A 1 136 GLU 136 163 163 GLU GLU A . n A 1 137 LEU 137 164 164 LEU LEU A . n A 1 138 PRO 138 165 165 PRO PRO A . n A 1 139 THR 139 166 ? ? ? A . n A 1 140 GLU 140 167 ? ? ? A . n A 1 141 GLU 141 168 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8Q9 1 201 1 8Q9 E0I A . C 3 NO3 1 202 1 NO3 NO3 A . D 3 NO3 1 203 2 NO3 NO3 A . E 4 EDO 1 204 1 EDO EDO A . F 5 GOL 1 205 1 GOL GOL A . G 5 GOL 1 206 2 GOL GOL A . H 6 HOH 1 301 56 HOH HOH A . H 6 HOH 2 302 9 HOH HOH A . H 6 HOH 3 303 2 HOH HOH A . H 6 HOH 4 304 47 HOH HOH A . H 6 HOH 5 305 43 HOH HOH A . H 6 HOH 6 306 30 HOH HOH A . H 6 HOH 7 307 61 HOH HOH A . H 6 HOH 8 308 60 HOH HOH A . H 6 HOH 9 309 18 HOH HOH A . H 6 HOH 10 310 11 HOH HOH A . H 6 HOH 11 311 5 HOH HOH A . H 6 HOH 12 312 14 HOH HOH A . H 6 HOH 13 313 38 HOH HOH A . H 6 HOH 14 314 36 HOH HOH A . H 6 HOH 15 315 46 HOH HOH A . H 6 HOH 16 316 27 HOH HOH A . H 6 HOH 17 317 41 HOH HOH A . H 6 HOH 18 318 29 HOH HOH A . H 6 HOH 19 319 16 HOH HOH A . H 6 HOH 20 320 48 HOH HOH A . H 6 HOH 21 321 21 HOH HOH A . H 6 HOH 22 322 34 HOH HOH A . H 6 HOH 23 323 10 HOH HOH A . H 6 HOH 24 324 58 HOH HOH A . H 6 HOH 25 325 39 HOH HOH A . H 6 HOH 26 326 1 HOH HOH A . H 6 HOH 27 327 37 HOH HOH A . H 6 HOH 28 328 22 HOH HOH A . H 6 HOH 29 329 62 HOH HOH A . H 6 HOH 30 330 40 HOH HOH A . H 6 HOH 31 331 23 HOH HOH A . H 6 HOH 32 332 3 HOH HOH A . H 6 HOH 33 333 32 HOH HOH A . H 6 HOH 34 334 15 HOH HOH A . H 6 HOH 35 335 25 HOH HOH A . H 6 HOH 36 336 24 HOH HOH A . H 6 HOH 37 337 49 HOH HOH A . H 6 HOH 38 338 13 HOH HOH A . H 6 HOH 39 339 6 HOH HOH A . H 6 HOH 40 340 33 HOH HOH A . H 6 HOH 41 341 28 HOH HOH A . H 6 HOH 42 342 52 HOH HOH A . H 6 HOH 43 343 45 HOH HOH A . H 6 HOH 44 344 67 HOH HOH A . H 6 HOH 45 345 17 HOH HOH A . H 6 HOH 46 346 55 HOH HOH A . H 6 HOH 47 347 66 HOH HOH A . H 6 HOH 48 348 12 HOH HOH A . H 6 HOH 49 349 65 HOH HOH A . H 6 HOH 50 350 8 HOH HOH A . H 6 HOH 51 351 4 HOH HOH A . H 6 HOH 52 352 35 HOH HOH A . H 6 HOH 53 353 31 HOH HOH A . H 6 HOH 54 354 19 HOH HOH A . H 6 HOH 55 355 7 HOH HOH A . H 6 HOH 56 356 20 HOH HOH A . H 6 HOH 57 357 42 HOH HOH A . H 6 HOH 58 358 26 HOH HOH A . H 6 HOH 59 359 54 HOH HOH A . H 6 HOH 60 360 51 HOH HOH A . H 6 HOH 61 361 50 HOH HOH A . H 6 HOH 62 362 64 HOH HOH A . H 6 HOH 63 363 59 HOH HOH A . H 6 HOH 64 364 63 HOH HOH A . H 6 HOH 65 365 53 HOH HOH A . H 6 HOH 66 366 44 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.14 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MERLOT ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5Y93 _cell.details ? _cell.formula_units_Z ? _cell.length_a 35.040 _cell.length_a_esd ? _cell.length_b 47.120 _cell.length_b_esd ? _cell.length_c 78.030 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y93 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Y93 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.92 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.3 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% PEG3350, 0.2M NaNO3, 0.1M HEPES, 10% EtGhly,pH8.3' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-09-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97853 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97853 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5Y93 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.620 _reflns.d_resolution_low 78.030 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17128 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.300 _reflns.pdbx_Rmerge_I_obs 0.078 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.600 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.086 _reflns.pdbx_Rpim_I_all 0.034 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.620 _reflns_shell.d_res_low 1.640 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 823 _reflns_shell.percent_possible_all 99.900 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.307 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.600 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.333 _reflns_shell.pdbx_Rpim_I_all 0.128 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.968 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 2.4800 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -1.1700 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -1.3100 _refine.B_iso_max 57.180 _refine.B_iso_mean 19.2160 _refine.B_iso_min 9.690 _refine.correlation_coeff_Fo_to_Fc 0.9570 _refine.correlation_coeff_Fo_to_Fc_free 0.9390 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5Y93 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.6200 _refine.ls_d_res_low 40.3400 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16206 _refine.ls_number_reflns_R_free 877 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.7000 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1852 _refine.ls_R_factor_R_free 0.2102 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1839 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1030 _refine.pdbx_overall_ESU_R_Free 0.0970 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.8220 _refine.overall_SU_ML 0.0630 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.6200 _refine_hist.d_res_low 40.3400 _refine_hist.pdbx_number_atoms_ligand 60 _refine_hist.number_atoms_solvent 66 _refine_hist.number_atoms_total 1241 _refine_hist.pdbx_number_residues_total 133 _refine_hist.pdbx_B_iso_mean_ligand 24.59 _refine_hist.pdbx_B_iso_mean_solvent 24.23 _refine_hist.pdbx_number_atoms_protein 1115 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.020 1246 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 1181 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.557 1.996 1695 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.194 3.012 2729 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.699 5.000 140 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 33.552 25.085 59 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.794 15.000 210 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 7.658 15.000 4 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.092 0.200 172 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.021 1384 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 288 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.6170 _refine_ls_shell.d_res_low 1.6590 _refine_ls_shell.number_reflns_all 1244 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 66 _refine_ls_shell.number_reflns_R_work 1178 _refine_ls_shell.percent_reflns_obs 99.6800 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2080 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2210 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5Y93 _struct.title 'Crystal Structure Analysis of the BRD4' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Y93 _struct_keywords.text 'BRD4(1), Bromodomain, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQ ECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _struct_ref.pdbx_align_begin 44 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5Y93 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 17 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 141 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 168 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5Y93 MET A 1 ? UNP O60885 ? ? 'expression tag' 28 1 1 5Y93 LYS A 2 ? UNP O60885 ? ? 'expression tag' 29 2 1 5Y93 LYS A 3 ? UNP O60885 ? ? 'expression tag' 30 3 1 5Y93 GLY A 4 ? UNP O60885 ? ? 'expression tag' 31 4 1 5Y93 HIS A 5 ? UNP O60885 ? ? 'expression tag' 32 5 1 5Y93 HIS A 6 ? UNP O60885 ? ? 'expression tag' 33 6 1 5Y93 HIS A 7 ? UNP O60885 ? ? 'expression tag' 34 7 1 5Y93 HIS A 8 ? UNP O60885 ? ? 'expression tag' 35 8 1 5Y93 HIS A 9 ? UNP O60885 ? ? 'expression tag' 36 9 1 5Y93 HIS A 10 ? UNP O60885 ? ? 'expression tag' 37 10 1 5Y93 LEU A 11 ? UNP O60885 ? ? 'expression tag' 38 11 1 5Y93 VAL A 12 ? UNP O60885 ? ? 'expression tag' 39 12 1 5Y93 PRO A 13 ? UNP O60885 ? ? 'expression tag' 40 13 1 5Y93 ARG A 14 ? UNP O60885 ? ? 'expression tag' 41 14 1 5Y93 GLY A 15 ? UNP O60885 ? ? 'expression tag' 42 15 1 5Y93 SER A 16 ? UNP O60885 ? ? 'expression tag' 43 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 120 ? 1 MORE 1 ? 1 'SSA (A^2)' 8710 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 33 ? VAL A 42 ? THR A 60 VAL A 69 1 ? 10 HELX_P HELX_P2 AA2 VAL A 42 ? LYS A 49 ? VAL A 69 LYS A 76 1 ? 8 HELX_P HELX_P3 AA3 ALA A 53 ? GLN A 57 ? ALA A 80 GLN A 84 5 ? 5 HELX_P HELX_P4 AA4 ASP A 69 ? ILE A 74 ? ASP A 96 ILE A 101 1 ? 6 HELX_P HELX_P5 AA5 ASP A 79 ? ASN A 89 ? ASP A 106 ASN A 116 1 ? 11 HELX_P HELX_P6 AA6 ASN A 94 ? ASN A 113 ? ASN A 121 ASN A 140 1 ? 20 HELX_P HELX_P7 AA7 ASP A 117 ? ASN A 135 ? ASP A 144 ASN A 162 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 12 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 39 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 13 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 40 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -5.25 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 8Q9 201 ? 11 'binding site for residue 8Q9 A 201' AC2 Software A NO3 202 ? 5 'binding site for residue NO3 A 202' AC3 Software A NO3 203 ? 9 'binding site for residue NO3 A 203' AC4 Software A EDO 204 ? 5 'binding site for residue EDO A 204' AC5 Software A GOL 205 ? 6 'binding site for residue GOL A 205' AC6 Software A GOL 206 ? 6 'binding site for residue GOL A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 TRP A 54 ? TRP A 81 . ? 1_555 ? 2 AC1 11 PRO A 55 ? PRO A 82 . ? 1_555 ? 3 AC1 11 VAL A 60 ? VAL A 87 . ? 1_555 ? 4 AC1 11 LEU A 65 ? LEU A 92 . ? 1_555 ? 5 AC1 11 LEU A 67 ? LEU A 94 . ? 1_555 ? 6 AC1 11 LYS A 72 ? LYS A 99 . ? 4_555 ? 7 AC1 11 ASN A 113 ? ASN A 140 . ? 1_555 ? 8 AC1 11 MET A 122 ? MET A 149 . ? 1_555 ? 9 AC1 11 HOH H . ? HOH A 312 . ? 1_555 ? 10 AC1 11 HOH H . ? HOH A 323 . ? 1_555 ? 11 AC1 11 HOH H . ? HOH A 338 . ? 1_555 ? 12 AC2 5 LYS A 30 ? LYS A 57 . ? 3_455 ? 13 AC2 5 TYR A 71 ? TYR A 98 . ? 1_555 ? 14 AC2 5 LYS A 72 ? LYS A 99 . ? 1_555 ? 15 AC2 5 LYS A 75 ? LYS A 102 . ? 1_555 ? 16 AC2 5 ASP A 118 ? ASP A 145 . ? 4_455 ? 17 AC3 9 HIS A 7 ? HIS A 34 . ? 1_555 ? 18 AC3 9 HIS A 8 ? HIS A 35 . ? 1_555 ? 19 AC3 9 HIS A 9 ? HIS A 36 . ? 1_555 ? 20 AC3 9 HIS A 10 ? HIS A 37 . ? 1_555 ? 21 AC3 9 LEU A 11 ? LEU A 38 . ? 1_555 ? 22 AC3 9 VAL A 12 ? VAL A 39 . ? 1_555 ? 23 AC3 9 GLN A 96 ? GLN A 123 . ? 1_565 ? 24 AC3 9 ILE A 99 ? ILE A 126 . ? 1_565 ? 25 AC3 9 ASN A 103 ? ASN A 130 . ? 1_565 ? 26 AC4 5 ILE A 73 ? ILE A 100 . ? 1_555 ? 27 AC4 5 ILE A 74 ? ILE A 101 . ? 1_555 ? 28 AC4 5 LYS A 75 ? LYS A 102 . ? 1_555 ? 29 AC4 5 THR A 76 ? THR A 103 . ? 1_555 ? 30 AC4 5 ASN A 108 ? ASN A 135 . ? 1_555 ? 31 AC5 6 TYR A 38 ? TYR A 65 . ? 4_445 ? 32 AC5 6 TYR A 110 ? TYR A 137 . ? 1_555 ? 33 AC5 6 GLU A 124 ? GLU A 151 . ? 1_555 ? 34 AC5 6 LYS A 133 ? LYS A 160 . ? 4_445 ? 35 AC5 6 GLU A 136 ? GLU A 163 . ? 4_445 ? 36 AC5 6 HOH H . ? HOH A 313 . ? 1_555 ? 37 AC6 6 PRO A 19 ? PRO A 46 . ? 3_445 ? 38 AC6 6 PRO A 21 ? PRO A 48 . ? 3_445 ? 39 AC6 6 ARG A 31 ? ARG A 58 . ? 1_555 ? 40 AC6 6 TRP A 93 ? TRP A 120 . ? 1_555 ? 41 AC6 6 ASN A 94 ? ASN A 121 . ? 1_555 ? 42 AC6 6 HOH H . ? HOH A 311 . ? 3_445 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 52 ? ? -161.79 96.66 2 1 ASN A 140 ? ? -106.42 -169.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 28 ? A MET 1 2 1 Y 1 A LYS 29 ? A LYS 2 3 1 Y 1 A LYS 30 ? A LYS 3 4 1 Y 1 A GLY 31 ? A GLY 4 5 1 Y 1 A HIS 32 ? A HIS 5 6 1 Y 1 A THR 166 ? A THR 139 7 1 Y 1 A GLU 167 ? A GLU 140 8 1 Y 1 A GLU 168 ? A GLU 141 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8Q9 CAX C N N 1 8Q9 CAY C N N 2 8Q9 OAZ O N N 3 8Q9 CBA C N N 4 8Q9 CBB C N N 5 8Q9 NAW N N N 6 8Q9 CAV C N N 7 8Q9 CAU C N N 8 8Q9 NAT N N N 9 8Q9 CAR C N N 10 8Q9 OAS O N N 11 8Q9 CAQ C N N 12 8Q9 OAL O N N 13 8Q9 CAB C Y N 14 8Q9 CAC C Y N 15 8Q9 CAD C Y N 16 8Q9 OAG O Y N 17 8Q9 NAH N Y N 18 8Q9 CAI C Y N 19 8Q9 CAJ C N N 20 8Q9 CAE C Y N 21 8Q9 CAF C Y N 22 8Q9 CAA C Y N 23 8Q9 NAK N N N 24 8Q9 SAM S N N 25 8Q9 OAN O N N 26 8Q9 OAO O N N 27 8Q9 CAP C Y N 28 8Q9 CBG C Y N 29 8Q9 CBF C Y N 30 8Q9 BRBJ BR N N 31 8Q9 CBE C Y N 32 8Q9 CBD C Y N 33 8Q9 CBC C Y N 34 8Q9 OBH O N N 35 8Q9 CBI C N N 36 8Q9 H1 H N N 37 8Q9 H2 H N N 38 8Q9 H3 H N N 39 8Q9 H4 H N N 40 8Q9 H5 H N N 41 8Q9 H6 H N N 42 8Q9 H7 H N N 43 8Q9 H8 H N N 44 8Q9 H10 H N N 45 8Q9 H11 H N N 46 8Q9 H12 H N N 47 8Q9 H13 H N N 48 8Q9 H14 H N N 49 8Q9 H15 H N N 50 8Q9 H16 H N N 51 8Q9 H17 H N N 52 8Q9 H18 H N N 53 8Q9 H19 H N N 54 8Q9 H20 H N N 55 8Q9 H21 H N N 56 8Q9 H22 H N N 57 8Q9 H23 H N N 58 8Q9 H24 H N N 59 8Q9 H25 H N N 60 8Q9 H26 H N N 61 8Q9 H27 H N N 62 8Q9 H28 H N N 63 ALA N N N N 64 ALA CA C N S 65 ALA C C N N 66 ALA O O N N 67 ALA CB C N N 68 ALA OXT O N N 69 ALA H H N N 70 ALA H2 H N N 71 ALA HA H N N 72 ALA HB1 H N N 73 ALA HB2 H N N 74 ALA HB3 H N N 75 ALA HXT H N N 76 ARG N N N N 77 ARG CA C N S 78 ARG C C N N 79 ARG O O N N 80 ARG CB C N N 81 ARG CG C N N 82 ARG CD C N N 83 ARG NE N N N 84 ARG CZ C N N 85 ARG NH1 N N N 86 ARG NH2 N N N 87 ARG OXT O N N 88 ARG H H N N 89 ARG H2 H N N 90 ARG HA H N N 91 ARG HB2 H N N 92 ARG HB3 H N N 93 ARG HG2 H N N 94 ARG HG3 H N N 95 ARG HD2 H N N 96 ARG HD3 H N N 97 ARG HE H N N 98 ARG HH11 H N N 99 ARG HH12 H N N 100 ARG HH21 H N N 101 ARG HH22 H N N 102 ARG HXT H N N 103 ASN N N N N 104 ASN CA C N S 105 ASN C C N N 106 ASN O O N N 107 ASN CB C N N 108 ASN CG C N N 109 ASN OD1 O N N 110 ASN ND2 N N N 111 ASN OXT O N N 112 ASN H H N N 113 ASN H2 H N N 114 ASN HA H N N 115 ASN HB2 H N N 116 ASN HB3 H N N 117 ASN HD21 H N N 118 ASN HD22 H N N 119 ASN HXT H N N 120 ASP N N N N 121 ASP CA C N S 122 ASP C C N N 123 ASP O O N N 124 ASP CB C N N 125 ASP CG C N N 126 ASP OD1 O N N 127 ASP OD2 O N N 128 ASP OXT O N N 129 ASP H H N N 130 ASP H2 H N N 131 ASP HA H N N 132 ASP HB2 H N N 133 ASP HB3 H N N 134 ASP HD2 H N N 135 ASP HXT H N N 136 CYS N N N N 137 CYS CA C N R 138 CYS C C N N 139 CYS O O N N 140 CYS CB C N N 141 CYS SG S N N 142 CYS OXT O N N 143 CYS H H N N 144 CYS H2 H N N 145 CYS HA H N N 146 CYS HB2 H N N 147 CYS HB3 H N N 148 CYS HG H N N 149 CYS HXT H N N 150 EDO C1 C N N 151 EDO O1 O N N 152 EDO C2 C N N 153 EDO O2 O N N 154 EDO H11 H N N 155 EDO H12 H N N 156 EDO HO1 H N N 157 EDO H21 H N N 158 EDO H22 H N N 159 EDO HO2 H N N 160 GLN N N N N 161 GLN CA C N S 162 GLN C C N N 163 GLN O O N N 164 GLN CB C N N 165 GLN CG C N N 166 GLN CD C N N 167 GLN OE1 O N N 168 GLN NE2 N N N 169 GLN OXT O N N 170 GLN H H N N 171 GLN H2 H N N 172 GLN HA H N N 173 GLN HB2 H N N 174 GLN HB3 H N N 175 GLN HG2 H N N 176 GLN HG3 H N N 177 GLN HE21 H N N 178 GLN HE22 H N N 179 GLN HXT H N N 180 GLU N N N N 181 GLU CA C N S 182 GLU C C N N 183 GLU O O N N 184 GLU CB C N N 185 GLU CG C N N 186 GLU CD C N N 187 GLU OE1 O N N 188 GLU OE2 O N N 189 GLU OXT O N N 190 GLU H H N N 191 GLU H2 H N N 192 GLU HA H N N 193 GLU HB2 H N N 194 GLU HB3 H N N 195 GLU HG2 H N N 196 GLU HG3 H N N 197 GLU HE2 H N N 198 GLU HXT H N N 199 GLY N N N N 200 GLY CA C N N 201 GLY C C N N 202 GLY O O N N 203 GLY OXT O N N 204 GLY H H N N 205 GLY H2 H N N 206 GLY HA2 H N N 207 GLY HA3 H N N 208 GLY HXT H N N 209 GOL C1 C N N 210 GOL O1 O N N 211 GOL C2 C N N 212 GOL O2 O N N 213 GOL C3 C N N 214 GOL O3 O N N 215 GOL H11 H N N 216 GOL H12 H N N 217 GOL HO1 H N N 218 GOL H2 H N N 219 GOL HO2 H N N 220 GOL H31 H N N 221 GOL H32 H N N 222 GOL HO3 H N N 223 HIS N N N N 224 HIS CA C N S 225 HIS C C N N 226 HIS O O N N 227 HIS CB C N N 228 HIS CG C Y N 229 HIS ND1 N Y N 230 HIS CD2 C Y N 231 HIS CE1 C Y N 232 HIS NE2 N Y N 233 HIS OXT O N N 234 HIS H H N N 235 HIS H2 H N N 236 HIS HA H N N 237 HIS HB2 H N N 238 HIS HB3 H N N 239 HIS HD1 H N N 240 HIS HD2 H N N 241 HIS HE1 H N N 242 HIS HE2 H N N 243 HIS HXT H N N 244 HOH O O N N 245 HOH H1 H N N 246 HOH H2 H N N 247 ILE N N N N 248 ILE CA C N S 249 ILE C C N N 250 ILE O O N N 251 ILE CB C N S 252 ILE CG1 C N N 253 ILE CG2 C N N 254 ILE CD1 C N N 255 ILE OXT O N N 256 ILE H H N N 257 ILE H2 H N N 258 ILE HA H N N 259 ILE HB H N N 260 ILE HG12 H N N 261 ILE HG13 H N N 262 ILE HG21 H N N 263 ILE HG22 H N N 264 ILE HG23 H N N 265 ILE HD11 H N N 266 ILE HD12 H N N 267 ILE HD13 H N N 268 ILE HXT H N N 269 LEU N N N N 270 LEU CA C N S 271 LEU C C N N 272 LEU O O N N 273 LEU CB C N N 274 LEU CG C N N 275 LEU CD1 C N N 276 LEU CD2 C N N 277 LEU OXT O N N 278 LEU H H N N 279 LEU H2 H N N 280 LEU HA H N N 281 LEU HB2 H N N 282 LEU HB3 H N N 283 LEU HG H N N 284 LEU HD11 H N N 285 LEU HD12 H N N 286 LEU HD13 H N N 287 LEU HD21 H N N 288 LEU HD22 H N N 289 LEU HD23 H N N 290 LEU HXT H N N 291 LYS N N N N 292 LYS CA C N S 293 LYS C C N N 294 LYS O O N N 295 LYS CB C N N 296 LYS CG C N N 297 LYS CD C N N 298 LYS CE C N N 299 LYS NZ N N N 300 LYS OXT O N N 301 LYS H H N N 302 LYS H2 H N N 303 LYS HA H N N 304 LYS HB2 H N N 305 LYS HB3 H N N 306 LYS HG2 H N N 307 LYS HG3 H N N 308 LYS HD2 H N N 309 LYS HD3 H N N 310 LYS HE2 H N N 311 LYS HE3 H N N 312 LYS HZ1 H N N 313 LYS HZ2 H N N 314 LYS HZ3 H N N 315 LYS HXT H N N 316 MET N N N N 317 MET CA C N S 318 MET C C N N 319 MET O O N N 320 MET CB C N N 321 MET CG C N N 322 MET SD S N N 323 MET CE C N N 324 MET OXT O N N 325 MET H H N N 326 MET H2 H N N 327 MET HA H N N 328 MET HB2 H N N 329 MET HB3 H N N 330 MET HG2 H N N 331 MET HG3 H N N 332 MET HE1 H N N 333 MET HE2 H N N 334 MET HE3 H N N 335 MET HXT H N N 336 NO3 N N N N 337 NO3 O1 O N N 338 NO3 O2 O N N 339 NO3 O3 O N N 340 PHE N N N N 341 PHE CA C N S 342 PHE C C N N 343 PHE O O N N 344 PHE CB C N N 345 PHE CG C Y N 346 PHE CD1 C Y N 347 PHE CD2 C Y N 348 PHE CE1 C Y N 349 PHE CE2 C Y N 350 PHE CZ C Y N 351 PHE OXT O N N 352 PHE H H N N 353 PHE H2 H N N 354 PHE HA H N N 355 PHE HB2 H N N 356 PHE HB3 H N N 357 PHE HD1 H N N 358 PHE HD2 H N N 359 PHE HE1 H N N 360 PHE HE2 H N N 361 PHE HZ H N N 362 PHE HXT H N N 363 PRO N N N N 364 PRO CA C N S 365 PRO C C N N 366 PRO O O N N 367 PRO CB C N N 368 PRO CG C N N 369 PRO CD C N N 370 PRO OXT O N N 371 PRO H H N N 372 PRO HA H N N 373 PRO HB2 H N N 374 PRO HB3 H N N 375 PRO HG2 H N N 376 PRO HG3 H N N 377 PRO HD2 H N N 378 PRO HD3 H N N 379 PRO HXT H N N 380 SER N N N N 381 SER CA C N S 382 SER C C N N 383 SER O O N N 384 SER CB C N N 385 SER OG O N N 386 SER OXT O N N 387 SER H H N N 388 SER H2 H N N 389 SER HA H N N 390 SER HB2 H N N 391 SER HB3 H N N 392 SER HG H N N 393 SER HXT H N N 394 THR N N N N 395 THR CA C N S 396 THR C C N N 397 THR O O N N 398 THR CB C N R 399 THR OG1 O N N 400 THR CG2 C N N 401 THR OXT O N N 402 THR H H N N 403 THR H2 H N N 404 THR HA H N N 405 THR HB H N N 406 THR HG1 H N N 407 THR HG21 H N N 408 THR HG22 H N N 409 THR HG23 H N N 410 THR HXT H N N 411 TRP N N N N 412 TRP CA C N S 413 TRP C C N N 414 TRP O O N N 415 TRP CB C N N 416 TRP CG C Y N 417 TRP CD1 C Y N 418 TRP CD2 C Y N 419 TRP NE1 N Y N 420 TRP CE2 C Y N 421 TRP CE3 C Y N 422 TRP CZ2 C Y N 423 TRP CZ3 C Y N 424 TRP CH2 C Y N 425 TRP OXT O N N 426 TRP H H N N 427 TRP H2 H N N 428 TRP HA H N N 429 TRP HB2 H N N 430 TRP HB3 H N N 431 TRP HD1 H N N 432 TRP HE1 H N N 433 TRP HE3 H N N 434 TRP HZ2 H N N 435 TRP HZ3 H N N 436 TRP HH2 H N N 437 TRP HXT H N N 438 TYR N N N N 439 TYR CA C N S 440 TYR C C N N 441 TYR O O N N 442 TYR CB C N N 443 TYR CG C Y N 444 TYR CD1 C Y N 445 TYR CD2 C Y N 446 TYR CE1 C Y N 447 TYR CE2 C Y N 448 TYR CZ C Y N 449 TYR OH O N N 450 TYR OXT O N N 451 TYR H H N N 452 TYR H2 H N N 453 TYR HA H N N 454 TYR HB2 H N N 455 TYR HB3 H N N 456 TYR HD1 H N N 457 TYR HD2 H N N 458 TYR HE1 H N N 459 TYR HE2 H N N 460 TYR HH H N N 461 TYR HXT H N N 462 VAL N N N N 463 VAL CA C N S 464 VAL C C N N 465 VAL O O N N 466 VAL CB C N N 467 VAL CG1 C N N 468 VAL CG2 C N N 469 VAL OXT O N N 470 VAL H H N N 471 VAL H2 H N N 472 VAL HA H N N 473 VAL HB H N N 474 VAL HG11 H N N 475 VAL HG12 H N N 476 VAL HG13 H N N 477 VAL HG21 H N N 478 VAL HG22 H N N 479 VAL HG23 H N N 480 VAL HXT H N N 481 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8Q9 OAZ CAY sing N N 1 8Q9 OAZ CBA sing N N 2 8Q9 CBE CBD doub Y N 3 8Q9 CBE CBF sing Y N 4 8Q9 CBD CBC sing Y N 5 8Q9 CAY CAX sing N N 6 8Q9 CBI OBH sing N N 7 8Q9 OAS CAR doub N N 8 8Q9 CBA CBB sing N N 9 8Q9 NAW CAX sing N N 10 8Q9 NAW CBB sing N N 11 8Q9 NAW CAV sing N N 12 8Q9 CAU CAV sing N N 13 8Q9 CAU NAT sing N N 14 8Q9 BRBJ CBF sing N N 15 8Q9 CBF CBG doub Y N 16 8Q9 CBC OBH sing N N 17 8Q9 CBC CAP doub Y N 18 8Q9 CAR NAT sing N N 19 8Q9 CAR CAQ sing N N 20 8Q9 CBG CAP sing Y N 21 8Q9 CAQ OAL sing N N 22 8Q9 CAP SAM sing N N 23 8Q9 OAL CAB sing N N 24 8Q9 OAO SAM doub N N 25 8Q9 SAM NAK sing N N 26 8Q9 SAM OAN doub N N 27 8Q9 CAB CAC sing Y N 28 8Q9 CAB CAA doub Y N 29 8Q9 CAC CAD doub Y N 30 8Q9 NAK CAA sing N N 31 8Q9 CAA CAF sing Y N 32 8Q9 CAD OAG sing Y N 33 8Q9 CAD CAE sing Y N 34 8Q9 CAF CAE doub Y N 35 8Q9 OAG NAH sing Y N 36 8Q9 CAE CAI sing Y N 37 8Q9 NAH CAI doub Y N 38 8Q9 CAI CAJ sing N N 39 8Q9 CAX H1 sing N N 40 8Q9 CAX H2 sing N N 41 8Q9 CAY H3 sing N N 42 8Q9 CAY H4 sing N N 43 8Q9 CBA H5 sing N N 44 8Q9 CBA H6 sing N N 45 8Q9 CBB H7 sing N N 46 8Q9 CBB H8 sing N N 47 8Q9 CAV H10 sing N N 48 8Q9 CAV H11 sing N N 49 8Q9 CAU H12 sing N N 50 8Q9 CAU H13 sing N N 51 8Q9 NAT H14 sing N N 52 8Q9 CAQ H15 sing N N 53 8Q9 CAQ H16 sing N N 54 8Q9 CAC H17 sing N N 55 8Q9 CAJ H18 sing N N 56 8Q9 CAJ H19 sing N N 57 8Q9 CAJ H20 sing N N 58 8Q9 CAF H21 sing N N 59 8Q9 NAK H22 sing N N 60 8Q9 CBG H23 sing N N 61 8Q9 CBE H24 sing N N 62 8Q9 CBD H25 sing N N 63 8Q9 CBI H26 sing N N 64 8Q9 CBI H27 sing N N 65 8Q9 CBI H28 sing N N 66 ALA N CA sing N N 67 ALA N H sing N N 68 ALA N H2 sing N N 69 ALA CA C sing N N 70 ALA CA CB sing N N 71 ALA CA HA sing N N 72 ALA C O doub N N 73 ALA C OXT sing N N 74 ALA CB HB1 sing N N 75 ALA CB HB2 sing N N 76 ALA CB HB3 sing N N 77 ALA OXT HXT sing N N 78 ARG N CA sing N N 79 ARG N H sing N N 80 ARG N H2 sing N N 81 ARG CA C sing N N 82 ARG CA CB sing N N 83 ARG CA HA sing N N 84 ARG C O doub N N 85 ARG C OXT sing N N 86 ARG CB CG sing N N 87 ARG CB HB2 sing N N 88 ARG CB HB3 sing N N 89 ARG CG CD sing N N 90 ARG CG HG2 sing N N 91 ARG CG HG3 sing N N 92 ARG CD NE sing N N 93 ARG CD HD2 sing N N 94 ARG CD HD3 sing N N 95 ARG NE CZ sing N N 96 ARG NE HE sing N N 97 ARG CZ NH1 sing N N 98 ARG CZ NH2 doub N N 99 ARG NH1 HH11 sing N N 100 ARG NH1 HH12 sing N N 101 ARG NH2 HH21 sing N N 102 ARG NH2 HH22 sing N N 103 ARG OXT HXT sing N N 104 ASN N CA sing N N 105 ASN N H sing N N 106 ASN N H2 sing N N 107 ASN CA C sing N N 108 ASN CA CB sing N N 109 ASN CA HA sing N N 110 ASN C O doub N N 111 ASN C OXT sing N N 112 ASN CB CG sing N N 113 ASN CB HB2 sing N N 114 ASN CB HB3 sing N N 115 ASN CG OD1 doub N N 116 ASN CG ND2 sing N N 117 ASN ND2 HD21 sing N N 118 ASN ND2 HD22 sing N N 119 ASN OXT HXT sing N N 120 ASP N CA sing N N 121 ASP N H sing N N 122 ASP N H2 sing N N 123 ASP CA C sing N N 124 ASP CA CB sing N N 125 ASP CA HA sing N N 126 ASP C O doub N N 127 ASP C OXT sing N N 128 ASP CB CG sing N N 129 ASP CB HB2 sing N N 130 ASP CB HB3 sing N N 131 ASP CG OD1 doub N N 132 ASP CG OD2 sing N N 133 ASP OD2 HD2 sing N N 134 ASP OXT HXT sing N N 135 CYS N CA sing N N 136 CYS N H sing N N 137 CYS N H2 sing N N 138 CYS CA C sing N N 139 CYS CA CB sing N N 140 CYS CA HA sing N N 141 CYS C O doub N N 142 CYS C OXT sing N N 143 CYS CB SG sing N N 144 CYS CB HB2 sing N N 145 CYS CB HB3 sing N N 146 CYS SG HG sing N N 147 CYS OXT HXT sing N N 148 EDO C1 O1 sing N N 149 EDO C1 C2 sing N N 150 EDO C1 H11 sing N N 151 EDO C1 H12 sing N N 152 EDO O1 HO1 sing N N 153 EDO C2 O2 sing N N 154 EDO C2 H21 sing N N 155 EDO C2 H22 sing N N 156 EDO O2 HO2 sing N N 157 GLN N CA sing N N 158 GLN N H sing N N 159 GLN N H2 sing N N 160 GLN CA C sing N N 161 GLN CA CB sing N N 162 GLN CA HA sing N N 163 GLN C O doub N N 164 GLN C OXT sing N N 165 GLN CB CG sing N N 166 GLN CB HB2 sing N N 167 GLN CB HB3 sing N N 168 GLN CG CD sing N N 169 GLN CG HG2 sing N N 170 GLN CG HG3 sing N N 171 GLN CD OE1 doub N N 172 GLN CD NE2 sing N N 173 GLN NE2 HE21 sing N N 174 GLN NE2 HE22 sing N N 175 GLN OXT HXT sing N N 176 GLU N CA sing N N 177 GLU N H sing N N 178 GLU N H2 sing N N 179 GLU CA C sing N N 180 GLU CA CB sing N N 181 GLU CA HA sing N N 182 GLU C O doub N N 183 GLU C OXT sing N N 184 GLU CB CG sing N N 185 GLU CB HB2 sing N N 186 GLU CB HB3 sing N N 187 GLU CG CD sing N N 188 GLU CG HG2 sing N N 189 GLU CG HG3 sing N N 190 GLU CD OE1 doub N N 191 GLU CD OE2 sing N N 192 GLU OE2 HE2 sing N N 193 GLU OXT HXT sing N N 194 GLY N CA sing N N 195 GLY N H sing N N 196 GLY N H2 sing N N 197 GLY CA C sing N N 198 GLY CA HA2 sing N N 199 GLY CA HA3 sing N N 200 GLY C O doub N N 201 GLY C OXT sing N N 202 GLY OXT HXT sing N N 203 GOL C1 O1 sing N N 204 GOL C1 C2 sing N N 205 GOL C1 H11 sing N N 206 GOL C1 H12 sing N N 207 GOL O1 HO1 sing N N 208 GOL C2 O2 sing N N 209 GOL C2 C3 sing N N 210 GOL C2 H2 sing N N 211 GOL O2 HO2 sing N N 212 GOL C3 O3 sing N N 213 GOL C3 H31 sing N N 214 GOL C3 H32 sing N N 215 GOL O3 HO3 sing N N 216 HIS N CA sing N N 217 HIS N H sing N N 218 HIS N H2 sing N N 219 HIS CA C sing N N 220 HIS CA CB sing N N 221 HIS CA HA sing N N 222 HIS C O doub N N 223 HIS C OXT sing N N 224 HIS CB CG sing N N 225 HIS CB HB2 sing N N 226 HIS CB HB3 sing N N 227 HIS CG ND1 sing Y N 228 HIS CG CD2 doub Y N 229 HIS ND1 CE1 doub Y N 230 HIS ND1 HD1 sing N N 231 HIS CD2 NE2 sing Y N 232 HIS CD2 HD2 sing N N 233 HIS CE1 NE2 sing Y N 234 HIS CE1 HE1 sing N N 235 HIS NE2 HE2 sing N N 236 HIS OXT HXT sing N N 237 HOH O H1 sing N N 238 HOH O H2 sing N N 239 ILE N CA sing N N 240 ILE N H sing N N 241 ILE N H2 sing N N 242 ILE CA C sing N N 243 ILE CA CB sing N N 244 ILE CA HA sing N N 245 ILE C O doub N N 246 ILE C OXT sing N N 247 ILE CB CG1 sing N N 248 ILE CB CG2 sing N N 249 ILE CB HB sing N N 250 ILE CG1 CD1 sing N N 251 ILE CG1 HG12 sing N N 252 ILE CG1 HG13 sing N N 253 ILE CG2 HG21 sing N N 254 ILE CG2 HG22 sing N N 255 ILE CG2 HG23 sing N N 256 ILE CD1 HD11 sing N N 257 ILE CD1 HD12 sing N N 258 ILE CD1 HD13 sing N N 259 ILE OXT HXT sing N N 260 LEU N CA sing N N 261 LEU N H sing N N 262 LEU N H2 sing N N 263 LEU CA C sing N N 264 LEU CA CB sing N N 265 LEU CA HA sing N N 266 LEU C O doub N N 267 LEU C OXT sing N N 268 LEU CB CG sing N N 269 LEU CB HB2 sing N N 270 LEU CB HB3 sing N N 271 LEU CG CD1 sing N N 272 LEU CG CD2 sing N N 273 LEU CG HG sing N N 274 LEU CD1 HD11 sing N N 275 LEU CD1 HD12 sing N N 276 LEU CD1 HD13 sing N N 277 LEU CD2 HD21 sing N N 278 LEU CD2 HD22 sing N N 279 LEU CD2 HD23 sing N N 280 LEU OXT HXT sing N N 281 LYS N CA sing N N 282 LYS N H sing N N 283 LYS N H2 sing N N 284 LYS CA C sing N N 285 LYS CA CB sing N N 286 LYS CA HA sing N N 287 LYS C O doub N N 288 LYS C OXT sing N N 289 LYS CB CG sing N N 290 LYS CB HB2 sing N N 291 LYS CB HB3 sing N N 292 LYS CG CD sing N N 293 LYS CG HG2 sing N N 294 LYS CG HG3 sing N N 295 LYS CD CE sing N N 296 LYS CD HD2 sing N N 297 LYS CD HD3 sing N N 298 LYS CE NZ sing N N 299 LYS CE HE2 sing N N 300 LYS CE HE3 sing N N 301 LYS NZ HZ1 sing N N 302 LYS NZ HZ2 sing N N 303 LYS NZ HZ3 sing N N 304 LYS OXT HXT sing N N 305 MET N CA sing N N 306 MET N H sing N N 307 MET N H2 sing N N 308 MET CA C sing N N 309 MET CA CB sing N N 310 MET CA HA sing N N 311 MET C O doub N N 312 MET C OXT sing N N 313 MET CB CG sing N N 314 MET CB HB2 sing N N 315 MET CB HB3 sing N N 316 MET CG SD sing N N 317 MET CG HG2 sing N N 318 MET CG HG3 sing N N 319 MET SD CE sing N N 320 MET CE HE1 sing N N 321 MET CE HE2 sing N N 322 MET CE HE3 sing N N 323 MET OXT HXT sing N N 324 NO3 N O1 doub N N 325 NO3 N O2 sing N N 326 NO3 N O3 sing N N 327 PHE N CA sing N N 328 PHE N H sing N N 329 PHE N H2 sing N N 330 PHE CA C sing N N 331 PHE CA CB sing N N 332 PHE CA HA sing N N 333 PHE C O doub N N 334 PHE C OXT sing N N 335 PHE CB CG sing N N 336 PHE CB HB2 sing N N 337 PHE CB HB3 sing N N 338 PHE CG CD1 doub Y N 339 PHE CG CD2 sing Y N 340 PHE CD1 CE1 sing Y N 341 PHE CD1 HD1 sing N N 342 PHE CD2 CE2 doub Y N 343 PHE CD2 HD2 sing N N 344 PHE CE1 CZ doub Y N 345 PHE CE1 HE1 sing N N 346 PHE CE2 CZ sing Y N 347 PHE CE2 HE2 sing N N 348 PHE CZ HZ sing N N 349 PHE OXT HXT sing N N 350 PRO N CA sing N N 351 PRO N CD sing N N 352 PRO N H sing N N 353 PRO CA C sing N N 354 PRO CA CB sing N N 355 PRO CA HA sing N N 356 PRO C O doub N N 357 PRO C OXT sing N N 358 PRO CB CG sing N N 359 PRO CB HB2 sing N N 360 PRO CB HB3 sing N N 361 PRO CG CD sing N N 362 PRO CG HG2 sing N N 363 PRO CG HG3 sing N N 364 PRO CD HD2 sing N N 365 PRO CD HD3 sing N N 366 PRO OXT HXT sing N N 367 SER N CA sing N N 368 SER N H sing N N 369 SER N H2 sing N N 370 SER CA C sing N N 371 SER CA CB sing N N 372 SER CA HA sing N N 373 SER C O doub N N 374 SER C OXT sing N N 375 SER CB OG sing N N 376 SER CB HB2 sing N N 377 SER CB HB3 sing N N 378 SER OG HG sing N N 379 SER OXT HXT sing N N 380 THR N CA sing N N 381 THR N H sing N N 382 THR N H2 sing N N 383 THR CA C sing N N 384 THR CA CB sing N N 385 THR CA HA sing N N 386 THR C O doub N N 387 THR C OXT sing N N 388 THR CB OG1 sing N N 389 THR CB CG2 sing N N 390 THR CB HB sing N N 391 THR OG1 HG1 sing N N 392 THR CG2 HG21 sing N N 393 THR CG2 HG22 sing N N 394 THR CG2 HG23 sing N N 395 THR OXT HXT sing N N 396 TRP N CA sing N N 397 TRP N H sing N N 398 TRP N H2 sing N N 399 TRP CA C sing N N 400 TRP CA CB sing N N 401 TRP CA HA sing N N 402 TRP C O doub N N 403 TRP C OXT sing N N 404 TRP CB CG sing N N 405 TRP CB HB2 sing N N 406 TRP CB HB3 sing N N 407 TRP CG CD1 doub Y N 408 TRP CG CD2 sing Y N 409 TRP CD1 NE1 sing Y N 410 TRP CD1 HD1 sing N N 411 TRP CD2 CE2 doub Y N 412 TRP CD2 CE3 sing Y N 413 TRP NE1 CE2 sing Y N 414 TRP NE1 HE1 sing N N 415 TRP CE2 CZ2 sing Y N 416 TRP CE3 CZ3 doub Y N 417 TRP CE3 HE3 sing N N 418 TRP CZ2 CH2 doub Y N 419 TRP CZ2 HZ2 sing N N 420 TRP CZ3 CH2 sing Y N 421 TRP CZ3 HZ3 sing N N 422 TRP CH2 HH2 sing N N 423 TRP OXT HXT sing N N 424 TYR N CA sing N N 425 TYR N H sing N N 426 TYR N H2 sing N N 427 TYR CA C sing N N 428 TYR CA CB sing N N 429 TYR CA HA sing N N 430 TYR C O doub N N 431 TYR C OXT sing N N 432 TYR CB CG sing N N 433 TYR CB HB2 sing N N 434 TYR CB HB3 sing N N 435 TYR CG CD1 doub Y N 436 TYR CG CD2 sing Y N 437 TYR CD1 CE1 sing Y N 438 TYR CD1 HD1 sing N N 439 TYR CD2 CE2 doub Y N 440 TYR CD2 HD2 sing N N 441 TYR CE1 CZ doub Y N 442 TYR CE1 HE1 sing N N 443 TYR CE2 CZ sing Y N 444 TYR CE2 HE2 sing N N 445 TYR CZ OH sing N N 446 TYR OH HH sing N N 447 TYR OXT HXT sing N N 448 VAL N CA sing N N 449 VAL N H sing N N 450 VAL N H2 sing N N 451 VAL CA C sing N N 452 VAL CA CB sing N N 453 VAL CA HA sing N N 454 VAL C O doub N N 455 VAL C OXT sing N N 456 VAL CB CG1 sing N N 457 VAL CB CG2 sing N N 458 VAL CB HB sing N N 459 VAL CG1 HG11 sing N N 460 VAL CG1 HG12 sing N N 461 VAL CG1 HG13 sing N N 462 VAL CG2 HG21 sing N N 463 VAL CG2 HG22 sing N N 464 VAL CG2 HG23 sing N N 465 VAL OXT HXT sing N N 466 # _atom_sites.entry_id 5Y93 _atom_sites.fract_transf_matrix[1][1] 0.028539 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021222 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012816 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C N O S # loop_