HEADER PEPTIDE BINDING PROTEIN 26-AUG-17 5Y9O TITLE THE APO STRUCTURE OF LEGIONELLA PNEUMOPHILA WIPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: WIPA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-410; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: WIPA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHOSPHOTASE, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.XIE,Q.JIA REVDAT 3 22-NOV-23 5Y9O 1 REMARK REVDAT 2 20-JUN-18 5Y9O 1 JRNL REVDAT 1 16-MAY-18 5Y9O 0 JRNL AUTH Q.JIA,Y.LIN,X.GOU,L.HE,D.SHEN,D.CHEN,W.XIE,Y.LU JRNL TITL LEGIONELLA PNEUMOPHILA EFFECTOR WIPA, A BACTERIAL PPP JRNL TITL 2 PROTEIN PHOSPHATASE WITH PTP ACTIVITY JRNL REF ACTA BIOCHIM. BIOPHYS. SIN. V. 50 547 2018 JRNL REF 2 (SHANGHAI) JRNL REFN ESSN 1745-7270 JRNL PMID 29701815 JRNL DOI 10.1093/ABBS/GMY042 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 31604 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1517 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.6161 - 5.6777 0.98 2870 140 0.2214 0.2600 REMARK 3 2 5.6777 - 4.5077 1.00 2785 145 0.2194 0.2967 REMARK 3 3 4.5077 - 3.9383 1.00 2758 156 0.2071 0.2524 REMARK 3 4 3.9383 - 3.5783 1.00 2773 115 0.2129 0.2691 REMARK 3 5 3.5783 - 3.3219 1.00 2717 160 0.2247 0.2796 REMARK 3 6 3.3219 - 3.1261 1.00 2758 95 0.2383 0.3168 REMARK 3 7 3.1261 - 2.9696 1.00 2697 164 0.2483 0.3302 REMARK 3 8 2.9696 - 2.8403 1.00 2685 152 0.2453 0.3092 REMARK 3 9 2.8403 - 2.7310 1.00 2736 127 0.2373 0.3417 REMARK 3 10 2.7310 - 2.6368 1.00 2723 138 0.2377 0.2960 REMARK 3 11 2.6368 - 2.5543 0.96 2585 125 0.2285 0.2759 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6401 REMARK 3 ANGLE : 0.875 8707 REMARK 3 CHIRALITY : 0.053 986 REMARK 3 PLANARITY : 0.005 1130 REMARK 3 DIHEDRAL : 16.133 3811 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Y9O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1300004440. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31780 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.25000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 0.99100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5N6X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG6000, 0.1 M MES (PH 6.0) AND REMARK 280 0.1 M NACL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 46.80400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.98800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.80400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.98800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 LYS A 3 REMARK 465 ARG A 4 REMARK 465 LEU A 5 REMARK 465 ILE A 6 REMARK 465 ASN A 7 REMARK 465 LYS A 8 REMARK 465 ASN A 9 REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 LYS B 3 REMARK 465 ARG B 4 REMARK 465 LEU B 5 REMARK 465 ILE B 6 REMARK 465 ASN B 7 REMARK 465 LYS B 8 REMARK 465 THR B 410 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 GLU A 80 CG CD OE1 OE2 REMARK 470 GLN A 86 CG CD OE1 NE2 REMARK 470 ILE A 90 CG1 CG2 CD1 REMARK 470 LYS A 91 CG CD CE NZ REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 ASP A 111 CG OD1 OD2 REMARK 470 HIS A 112 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 114 CG CD CE NZ REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 470 GLN A 118 CG CD OE1 NE2 REMARK 470 GLN A 122 CG CD OE1 NE2 REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 GLU A 128 CG CD OE1 OE2 REMARK 470 GLN A 132 CG CD OE1 NE2 REMARK 470 GLU A 143 CG CD OE1 OE2 REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 161 CG CD CE NZ REMARK 470 ILE A 171 CG1 CG2 CD1 REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 ARG A 185 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 239 CG1 CG2 CD1 REMARK 470 GLU A 282 CG CD OE1 OE2 REMARK 470 LYS A 333 CG CD CE NZ REMARK 470 GLU A 342 CG CD OE1 OE2 REMARK 470 ASN A 347 CG OD1 ND2 REMARK 470 GLU A 355 CG CD OE1 OE2 REMARK 470 GLU A 377 CG CD OE1 OE2 REMARK 470 THR A 410 OG1 CG2 REMARK 470 ASN B 9 CG OD1 ND2 REMARK 470 ILE B 10 CG1 CG2 CD1 REMARK 470 GLU B 18 CG CD OE1 OE2 REMARK 470 LEU B 23 CG CD1 CD2 REMARK 470 LEU B 31 CG CD1 CD2 REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 LYS B 46 CG CD CE NZ REMARK 470 ILE B 55 CG1 CG2 CD1 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 GLU B 80 CG CD OE1 OE2 REMARK 470 LEU B 84 CG CD1 CD2 REMARK 470 LEU B 87 CG CD1 CD2 REMARK 470 ILE B 88 CG1 CG2 CD1 REMARK 470 ILE B 90 CG1 CG2 CD1 REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 ILE B 92 CG1 CG2 CD1 REMARK 470 GLN B 96 CG CD OE1 NE2 REMARK 470 GLN B 97 CG CD OE1 NE2 REMARK 470 LEU B 100 CG CD1 CD2 REMARK 470 GLU B 103 CG CD OE1 OE2 REMARK 470 SER B 107 OG REMARK 470 LEU B 108 CG CD1 CD2 REMARK 470 THR B 110 OG1 CG2 REMARK 470 ASP B 111 CG OD1 OD2 REMARK 470 HIS B 112 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 113 CG CD OE1 NE2 REMARK 470 LYS B 114 CG CD CE NZ REMARK 470 SER B 117 OG REMARK 470 GLN B 118 CG CD OE1 NE2 REMARK 470 SER B 119 OG REMARK 470 LEU B 121 CG CD1 CD2 REMARK 470 LYS B 124 CG CD CE NZ REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 ILE B 127 CG1 CG2 CD1 REMARK 470 ASN B 130 CG OD1 ND2 REMARK 470 LEU B 131 CG CD1 CD2 REMARK 470 GLN B 132 CG CD OE1 NE2 REMARK 470 GLU B 135 CG CD OE1 OE2 REMARK 470 LYS B 136 CG CD CE NZ REMARK 470 GLU B 142 CG CD OE1 OE2 REMARK 470 GLU B 143 CG CD OE1 OE2 REMARK 470 LYS B 144 CG CD CE NZ REMARK 470 GLU B 157 CG CD OE1 OE2 REMARK 470 LYS B 161 CG CD CE NZ REMARK 470 ILE B 171 CG1 CG2 CD1 REMARK 470 LYS B 172 CG CD CE NZ REMARK 470 GLN B 203 CG CD OE1 NE2 REMARK 470 LYS B 223 CG CD CE NZ REMARK 470 LYS B 233 CG CD CE NZ REMARK 470 GLU B 259 CG CD OE1 OE2 REMARK 470 ARG B 267 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 282 CG CD OE1 OE2 REMARK 470 VAL B 307 CG1 CG2 REMARK 470 THR B 308 OG1 CG2 REMARK 470 GLU B 319 CG CD OE1 OE2 REMARK 470 LYS B 333 CG CD CE NZ REMARK 470 LEU B 337 CG CD1 CD2 REMARK 470 GLU B 342 CG CD OE1 OE2 REMARK 470 ASN B 347 CG OD1 ND2 REMARK 470 GLU B 372 CG CD OE1 OE2 REMARK 470 GLU B 377 CG CD OE1 OE2 REMARK 470 LYS B 383 CG CD CE NZ REMARK 470 VAL B 389 CG1 CG2 REMARK 470 THR B 403 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 82 OD2 ASP B 238 2.03 REMARK 500 NH1 ARG A 176 O HOH A 601 2.12 REMARK 500 NH1 ARG A 176 OD2 ASP A 277 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 169 -61.81 -125.50 REMARK 500 TYR A 269 -67.56 -100.41 REMARK 500 GLU A 375 93.16 -68.51 REMARK 500 ASP A 409 68.64 -111.59 REMARK 500 LEU B 23 52.14 -112.89 REMARK 500 ASN B 169 -68.98 -122.22 REMARK 500 SER B 254 11.00 58.86 REMARK 500 TYR B 269 -53.54 -120.27 REMARK 500 ASN B 385 -124.01 55.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD B 503 DBREF 5Y9O A 1 410 UNP Q5GA16 Q5GA16_LEGPN 1 410 DBREF 5Y9O B 1 410 UNP Q5GA16 Q5GA16_LEGPN 1 410 SEQADV 5Y9O GLY A -1 UNP Q5GA16 EXPRESSION TAG SEQADV 5Y9O PRO A 0 UNP Q5GA16 EXPRESSION TAG SEQADV 5Y9O GLY B -1 UNP Q5GA16 EXPRESSION TAG SEQADV 5Y9O PRO B 0 UNP Q5GA16 EXPRESSION TAG SEQRES 1 A 412 GLY PRO MET PRO LYS ARG LEU ILE ASN LYS ASN ILE ASP SEQRES 2 A 412 ILE TYR ASN TYR PRO ASN GLU PHE GLU ASP ASN LEU GLY SEQRES 3 A 412 SER ILE SER LEU GLY ASP LEU HIS GLY ASN ALA ILE LYS SEQRES 4 A 412 LEU ILE HIS PHE LEU PHE ARG HIS LYS ILE ILE LYS PHE SEQRES 5 A 412 LYS THR GLU ILE ILE ASN PHE HIS GLU ALA TYR GLN GLN SEQRES 6 A 412 PHE VAL THR ILE TYR GLU GLN TYR ASP ASP MET VAL GLN SEQRES 7 A 412 GLU TYR LEU GLU ILE ARG THR LEU LEU GLN LEU ILE GLN SEQRES 8 A 412 ILE LYS ILE THR ASN ALA GLN GLN ARG ILE LEU ASP ILE SEQRES 9 A 412 GLU GLN LYS LEU SER LEU ALA THR ASP HIS GLN LYS GLU SEQRES 10 A 412 PHE SER GLN SER LEU LEU GLN LEU LYS LYS PRO ILE GLU SEQRES 11 A 412 ALA ASN LEU GLN MET ALA GLU LYS SER LYS ALA GLY LEU SEQRES 12 A 412 GLU GLU LYS LEU SER GLY LEU LYS THR ARG LEU PRO SER SEQRES 13 A 412 CYS ILE GLU ARG PHE ASN LYS PHE MET THR GLN ILE GLU SEQRES 14 A 412 ILE ASN ASP ILE LYS THR LEU ILE ARG LEU LEU GLY ASP SEQRES 15 A 412 GLU VAL ALA ASP ARG GLY SER CYS ASP TYR PHE THR LEU SEQRES 16 A 412 ARG ILE LEU ASP PHE LEU TYR GLN ASN GLN ILE ALA ILE SEQRES 17 A 412 LYS ILE ILE LEU SER ASN HIS GLY TYR GLU PHE ILE HIS SEQRES 18 A 412 ALA TYR GLU LYS LEU VAL VAL GLY GLN PRO PHE LYS PRO SEQRES 19 A 412 LYS GLY TYR ILE GLY ASP ILE GLN ILE LYS SER PHE TRP SEQRES 20 A 412 GLY LEU GLN LEU LEU LEU GLU GLN SER VAL ILE THR GLU SEQRES 21 A 412 GLU GLU LEU ARG SER LEU VAL GLU ARG ALA TYR LYS PRO SEQRES 22 A 412 THR LEU LYS ILE ILE ASP TYR SER LEU SER GLU ASP GLY SEQRES 23 A 412 ILE THR LEU TYR SER HIS ALA PRO ILE ARG PHE ASP SER SEQRES 24 A 412 ILE ARG MET ALA ALA SER GLN LEU GLY VAL THR TYR ASN SEQRES 25 A 412 ASP SER THR LYS GLU ALA LEU ALA GLU THR ILE ASP GLN SEQRES 26 A 412 LEU ASN ALA GLN LEU GLN ILE TYR MET LYS ASN ASN MET SEQRES 27 A 412 LEU HIS LEU LEU PHE GLU ASN ASN GLU ILE ASN ASP PRO SEQRES 28 A 412 THR ASN MET THR ASP GLU GLU ARG ASN ALA SER PRO LEU SEQRES 29 A 412 ILE TYR LEU VAL TRP ASN ARG TRP ASN GLU SER LYS GLU SEQRES 30 A 412 VAL GLU ASN ALA ARG PRO GLY LYS TYR ASN GLY TYR PHE SEQRES 31 A 412 VAL THR TYR VAL HIS GLY HIS ASP PRO PHE GLN SER PRO SEQRES 32 A 412 LEU THR TYR VAL TYR ASN LEU ASP THR SEQRES 1 B 412 GLY PRO MET PRO LYS ARG LEU ILE ASN LYS ASN ILE ASP SEQRES 2 B 412 ILE TYR ASN TYR PRO ASN GLU PHE GLU ASP ASN LEU GLY SEQRES 3 B 412 SER ILE SER LEU GLY ASP LEU HIS GLY ASN ALA ILE LYS SEQRES 4 B 412 LEU ILE HIS PHE LEU PHE ARG HIS LYS ILE ILE LYS PHE SEQRES 5 B 412 LYS THR GLU ILE ILE ASN PHE HIS GLU ALA TYR GLN GLN SEQRES 6 B 412 PHE VAL THR ILE TYR GLU GLN TYR ASP ASP MET VAL GLN SEQRES 7 B 412 GLU TYR LEU GLU ILE ARG THR LEU LEU GLN LEU ILE GLN SEQRES 8 B 412 ILE LYS ILE THR ASN ALA GLN GLN ARG ILE LEU ASP ILE SEQRES 9 B 412 GLU GLN LYS LEU SER LEU ALA THR ASP HIS GLN LYS GLU SEQRES 10 B 412 PHE SER GLN SER LEU LEU GLN LEU LYS LYS PRO ILE GLU SEQRES 11 B 412 ALA ASN LEU GLN MET ALA GLU LYS SER LYS ALA GLY LEU SEQRES 12 B 412 GLU GLU LYS LEU SER GLY LEU LYS THR ARG LEU PRO SER SEQRES 13 B 412 CYS ILE GLU ARG PHE ASN LYS PHE MET THR GLN ILE GLU SEQRES 14 B 412 ILE ASN ASP ILE LYS THR LEU ILE ARG LEU LEU GLY ASP SEQRES 15 B 412 GLU VAL ALA ASP ARG GLY SER CYS ASP TYR PHE THR LEU SEQRES 16 B 412 ARG ILE LEU ASP PHE LEU TYR GLN ASN GLN ILE ALA ILE SEQRES 17 B 412 LYS ILE ILE LEU SER ASN HIS GLY TYR GLU PHE ILE HIS SEQRES 18 B 412 ALA TYR GLU LYS LEU VAL VAL GLY GLN PRO PHE LYS PRO SEQRES 19 B 412 LYS GLY TYR ILE GLY ASP ILE GLN ILE LYS SER PHE TRP SEQRES 20 B 412 GLY LEU GLN LEU LEU LEU GLU GLN SER VAL ILE THR GLU SEQRES 21 B 412 GLU GLU LEU ARG SER LEU VAL GLU ARG ALA TYR LYS PRO SEQRES 22 B 412 THR LEU LYS ILE ILE ASP TYR SER LEU SER GLU ASP GLY SEQRES 23 B 412 ILE THR LEU TYR SER HIS ALA PRO ILE ARG PHE ASP SER SEQRES 24 B 412 ILE ARG MET ALA ALA SER GLN LEU GLY VAL THR TYR ASN SEQRES 25 B 412 ASP SER THR LYS GLU ALA LEU ALA GLU THR ILE ASP GLN SEQRES 26 B 412 LEU ASN ALA GLN LEU GLN ILE TYR MET LYS ASN ASN MET SEQRES 27 B 412 LEU HIS LEU LEU PHE GLU ASN ASN GLU ILE ASN ASP PRO SEQRES 28 B 412 THR ASN MET THR ASP GLU GLU ARG ASN ALA SER PRO LEU SEQRES 29 B 412 ILE TYR LEU VAL TRP ASN ARG TRP ASN GLU SER LYS GLU SEQRES 30 B 412 VAL GLU ASN ALA ARG PRO GLY LYS TYR ASN GLY TYR PHE SEQRES 31 B 412 VAL THR TYR VAL HIS GLY HIS ASP PRO PHE GLN SER PRO SEQRES 32 B 412 LEU THR TYR VAL TYR ASN LEU ASP THR HET IOD A 501 1 HET IOD A 502 1 HET IOD A 503 1 HET IOD B 501 1 HET IOD B 503 1 HETNAM IOD IODIDE ION FORMUL 3 IOD 5(I 1-) FORMUL 8 HOH *74(H2 O) HELIX 1 AA1 ASN A 34 HIS A 45 1 12 HELIX 2 AA2 ASN A 56 LEU A 108 1 53 HELIX 3 AA3 GLN A 113 THR A 164 1 52 HELIX 4 AA4 CYS A 188 ASN A 202 1 15 HELIX 5 AA5 SER A 211 VAL A 226 1 16 HELIX 6 AA6 ASP A 238 GLN A 240 5 3 HELIX 7 AA7 ILE A 241 GLN A 253 1 13 HELIX 8 AA8 THR A 257 TYR A 269 1 13 HELIX 9 AA9 ASP A 296 GLY A 306 1 11 HELIX 10 AB1 THR A 313 ASN A 334 1 22 HELIX 11 AB2 MET A 336 PHE A 341 5 6 HELIX 12 AB3 ASP A 348 MET A 352 5 5 HELIX 13 AB4 THR A 353 SER A 360 1 8 HELIX 14 AB5 SER A 360 ASN A 368 1 9 HELIX 15 AB6 ASN B 34 HIS B 45 1 12 HELIX 16 AB7 ASN B 56 ALA B 109 1 54 HELIX 17 AB8 LYS B 114 THR B 150 1 37 HELIX 18 AB9 ARG B 151 GLN B 165 1 15 HELIX 19 AC1 CYS B 188 ASN B 202 1 15 HELIX 20 AC2 SER B 211 VAL B 226 1 16 HELIX 21 AC3 ASP B 238 GLN B 240 5 3 HELIX 22 AC4 ILE B 241 GLN B 253 1 13 HELIX 23 AC5 THR B 257 TYR B 269 1 13 HELIX 24 AC6 ARG B 294 GLY B 306 1 13 HELIX 25 AC7 THR B 313 ASN B 334 1 22 HELIX 26 AC8 MET B 336 PHE B 341 5 6 HELIX 27 AC9 ASP B 348 MET B 352 5 5 HELIX 28 AD1 THR B 353 SER B 360 1 8 HELIX 29 AD2 SER B 360 ASN B 368 1 9 SHEET 1 AA1 4 SER A 25 LEU A 28 0 SHEET 2 AA1 4 LEU A 174 LEU A 177 1 O ARG A 176 N LEU A 28 SHEET 3 AA1 4 ILE A 206 ILE A 209 1 O LYS A 207 N LEU A 177 SHEET 4 AA1 4 LEU A 273 LYS A 274 1 O LYS A 274 N ILE A 208 SHEET 1 AA2 2 ILE A 48 PHE A 50 0 SHEET 2 AA2 2 ILE A 166 ILE A 168 -1 O GLU A 167 N LYS A 49 SHEET 1 AA3 4 ASP A 277 LEU A 280 0 SHEET 2 AA3 4 GLY A 284 SER A 289 -1 O TYR A 288 N ASP A 277 SHEET 3 AA3 4 TYR A 387 GLY A 394 1 O THR A 390 N LEU A 287 SHEET 4 AA3 4 LYS A 383 TYR A 384 -1 N TYR A 384 O TYR A 387 SHEET 1 AA4 4 ASP A 277 LEU A 280 0 SHEET 2 AA4 4 GLY A 284 SER A 289 -1 O TYR A 288 N ASP A 277 SHEET 3 AA4 4 TYR A 387 GLY A 394 1 O THR A 390 N LEU A 287 SHEET 4 AA4 4 VAL A 405 LEU A 408 1 O TYR A 406 N HIS A 393 SHEET 1 AA5 4 SER B 25 LEU B 28 0 SHEET 2 AA5 4 LEU B 174 LEU B 177 1 O ARG B 176 N ILE B 26 SHEET 3 AA5 4 ILE B 206 ILE B 209 1 O ILE B 209 N LEU B 177 SHEET 4 AA5 4 LEU B 273 LYS B 274 1 O LYS B 274 N ILE B 208 SHEET 1 AA6 2 ILE B 48 PHE B 50 0 SHEET 2 AA6 2 ILE B 166 ILE B 168 -1 O GLU B 167 N LYS B 49 SHEET 1 AA7 4 ASP B 277 LEU B 280 0 SHEET 2 AA7 4 GLY B 284 SER B 289 -1 O TYR B 288 N ASP B 277 SHEET 3 AA7 4 TYR B 387 HIS B 393 1 O THR B 390 N LEU B 287 SHEET 4 AA7 4 LYS B 383 TYR B 384 -1 N TYR B 384 O TYR B 387 SHEET 1 AA8 4 ASP B 277 LEU B 280 0 SHEET 2 AA8 4 GLY B 284 SER B 289 -1 O TYR B 288 N ASP B 277 SHEET 3 AA8 4 TYR B 387 HIS B 393 1 O THR B 390 N LEU B 287 SHEET 4 AA8 4 VAL B 405 ASN B 407 1 O TYR B 406 N TYR B 391 SITE 1 AC1 2 PHE A 230 GLN A 248 SITE 1 AC2 2 ARG A 44 THR A 410 SITE 1 AC3 1 SER A 137 SITE 1 AC4 3 ARG B 294 TYR B 364 LYS B 374 SITE 1 AC5 2 GLN B 248 GLU B 252 CRYST1 93.608 95.976 106.635 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010683 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010419 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009378 0.00000