HEADER ISOMERASE 05-SEP-17 5YBW TITLE CRYSTAL STRUCTURE OF PYRIDOXAL 5'-PHOSPHATE-DEPENDENT ASPARTATE TITLE 2 RACEMASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE RACEMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.1.1.13; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCAPHARCA BROUGHTONII; SOURCE 3 ORGANISM_COMMON: BLOOD CLAM; SOURCE 4 ORGANISM_TAXID: 148819; SOURCE 5 GENE: ASR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET25B KEYWDS PYRIDOXAL 5'-PHOSPHATE, ASPARTATE RACEMASE, SCAPHARCA BROUGHTONII, KEYWDS 2 SERINE RACEMASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.MIZOBUCHI,R.NONAKA,M.YOSHIMURA,K.ABE,S.TAKAHASHI,Y.KERA,M.GOTO REVDAT 2 22-NOV-23 5YBW 1 REMARK REVDAT 1 20-DEC-17 5YBW 0 JRNL AUTH T.MIZOBUCHI,R.NONAKA,M.YOSHIMURA,K.ABE,S.TAKAHASHI,Y.KERA, JRNL AUTH 2 M.GOTO JRNL TITL CRYSTAL STRUCTURE OF A PYRIDOXAL 5'-PHOSPHATE-DEPENDENT JRNL TITL 2 ASPARTATE RACEMASE DERIVED FROM THE BIVALVE MOLLUSC JRNL TITL 3 SCAPHARCA BROUGHTONII JRNL REF ACTA CRYSTALLOGR F STRUCT V. 73 651 2017 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 29199985 JRNL DOI 10.1107/S2053230X17015813 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 44006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2224 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3003 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.3270 REMARK 3 BIN FREE R VALUE SET COUNT : 152 REMARK 3 BIN FREE R VALUE : 0.3570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4963 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 206 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.16000 REMARK 3 B22 (A**2) : 4.03000 REMARK 3 B33 (A**2) : -1.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.187 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.167 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.152 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.536 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5058 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6871 ; 1.374 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 650 ; 6.038 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 201 ;40.618 ;24.876 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 826 ;14.672 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;15.553 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 790 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3777 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5YBW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1300005011. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46230 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 78.936 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03700 REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.33800 REMARK 200 R SYM FOR SHELL (I) : 0.33800 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1V71 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, SODIUM ACETATE, AMMONIUM REMARK 280 ACETATE, GLYCEROL, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.09050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.35400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.09050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.35400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 495 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 135 REMARK 465 ASN B 136 REMARK 465 PRO B 137 REMARK 465 ALA B 148 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 ASP A 208 CG OD1 OD2 REMARK 470 GLU A 217 CG CD OE1 OE2 REMARK 470 LYS A 329 CG CD CE NZ REMARK 470 LYS B 16 CG CD CE NZ REMARK 470 LYS B 17 CG CD CE NZ REMARK 470 LYS B 24 CG CD CE NZ REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 ARG B 102 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 106 CG CD CE NZ REMARK 470 LYS B 113 CG CD CE NZ REMARK 470 THR B 114 OG1 CG2 REMARK 470 LYS B 132 CG CD CE NZ REMARK 470 ARG B 140 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 141 CG CD CE NZ REMARK 470 GLU B 142 CG CD OE1 OE2 REMARK 470 THR B 143 OG1 CG2 REMARK 470 GLU B 145 CG CD OE1 OE2 REMARK 470 LYS B 149 CG CD CE NZ REMARK 470 ARG B 151 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 153 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 227 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 159 -45.84 -149.85 REMARK 500 SER A 190 -82.32 -117.42 REMARK 500 THR A 205 -43.75 -133.26 REMARK 500 LYS A 206 79.53 -150.47 REMARK 500 THR B 59 -4.61 73.62 REMARK 500 ALA B 82 43.88 -80.88 REMARK 500 CYS B 133 -121.58 -147.92 REMARK 500 ARG B 151 -13.23 -152.47 REMARK 500 SER B 159 -45.13 -157.34 REMARK 500 SER B 190 -83.72 -115.00 REMARK 500 THR B 205 -44.82 -136.13 REMARK 500 HIS B 310 72.88 40.43 REMARK 500 PRO B 331 11.86 -68.02 REMARK 500 REMARK 500 REMARK: NULL DBREF 5YBW A 5 333 UNP Q2L695 Q2L695_ANABR 5 333 DBREF 5YBW B 5 333 UNP Q2L695 Q2L695_ANABR 5 333 SEQRES 1 A 329 ILE PRO GLN PHE GLU VAL THR VAL THR ASP ILE LYS LYS SEQRES 2 A 329 ALA TYR ASP ARG ILE SER LYS HIS ILE LEU TYR THR PRO SEQRES 3 A 329 VAL PHE THR SER PRO THR PHE ASP ARG MET VAL GLY SER SEQRES 4 A 329 LYS ALA GLY ARG GLN PHE TYR PHE LYS ALA GLU ASN LEU SEQRES 5 A 329 GLN LYS THR GLY SER PHE LLP ALA ARG GLY ALA LEU ASN SEQRES 6 A 329 ALA ILE LEU CYS ALA LEU GLU ARG GLU PRO SER LEU ALA SEQRES 7 A 329 GLY VAL VAL THR HIS SER SER GLY ASN HIS GLY GLN ALA SEQRES 8 A 329 LEU ALA TRP ALA SER LYS ARG ALA GLY VAL LYS CYS CYS SEQRES 9 A 329 VAL VAL VAL PRO LYS THR ALA PRO GLN VAL LYS PHE ASP SEQRES 10 A 329 ALA MET GLU ASN TYR GLY ALA GLU VAL VAL LYS CYS GLU SEQRES 11 A 329 PRO ASN PRO THR SER ARG LYS GLU THR CYS GLU GLY LEU SEQRES 12 A 329 ALA LYS SER ARG GLY TYR LYS TYR ILE SER SER SER ASP SEQRES 13 A 329 ASP TYR ASP VAL ILE ALA GLY GLN GLY THR ILE ALA LEU SEQRES 14 A 329 GLU LEU LEU GLN GLN GLN PRO ASP LEU ASP ALA ILE LEU SEQRES 15 A 329 VAL SER VAL SER ALA GLY GLY MET ALA SER GLY ILE CYS SEQRES 16 A 329 VAL TYR THR LYS ASN THR LYS SER ASP LEU LYS VAL PHE SEQRES 17 A 329 LEU VAL GLU PRO GLU GLY LYS MET LEU GLU GLU CYS ILE SEQRES 18 A 329 SER LYS ARG GLU ARG LEU TRP PRO ASN PRO PRO GLN PHE SEQRES 19 A 329 LEU ASP THR ILE ALA ASP GLY ILE ILE LEU GLN GLN CYS SEQRES 20 A 329 GLY ASN LYS THR TRP PRO ILE ILE LEU GLU LEU PRO GLU SEQRES 21 A 329 LYS GLU VAL ILE THR VAL ASN ASN ASP ASN ILE VAL GLU SEQRES 22 A 329 ALA MET ARG PHE VAL PHE ALA ARG MET LYS LEU VAL ILE SEQRES 23 A 329 GLU ALA ALA ALA GLY ALA THR VAL ALA ALA ALA MET THR SEQRES 24 A 329 GLU ARG PHE GLN ASN PHE HIS PRO GLU ALA LYS LYS VAL SEQRES 25 A 329 GLY ILE ILE LEU CYS GLY GLY ASN VAL ASP ILE GLU LYS SEQRES 26 A 329 LEU PRO TRP THR SEQRES 1 B 329 ILE PRO GLN PHE GLU VAL THR VAL THR ASP ILE LYS LYS SEQRES 2 B 329 ALA TYR ASP ARG ILE SER LYS HIS ILE LEU TYR THR PRO SEQRES 3 B 329 VAL PHE THR SER PRO THR PHE ASP ARG MET VAL GLY SER SEQRES 4 B 329 LYS ALA GLY ARG GLN PHE TYR PHE LYS ALA GLU ASN LEU SEQRES 5 B 329 GLN LYS THR GLY SER PHE LLP ALA ARG GLY ALA LEU ASN SEQRES 6 B 329 ALA ILE LEU CYS ALA LEU GLU ARG GLU PRO SER LEU ALA SEQRES 7 B 329 GLY VAL VAL THR HIS SER SER GLY ASN HIS GLY GLN ALA SEQRES 8 B 329 LEU ALA TRP ALA SER LYS ARG ALA GLY VAL LYS CYS CYS SEQRES 9 B 329 VAL VAL VAL PRO LYS THR ALA PRO GLN VAL LYS PHE ASP SEQRES 10 B 329 ALA MET GLU ASN TYR GLY ALA GLU VAL VAL LYS CYS GLU SEQRES 11 B 329 PRO ASN PRO THR SER ARG LYS GLU THR CYS GLU GLY LEU SEQRES 12 B 329 ALA LYS SER ARG GLY TYR LYS TYR ILE SER SER SER ASP SEQRES 13 B 329 ASP TYR ASP VAL ILE ALA GLY GLN GLY THR ILE ALA LEU SEQRES 14 B 329 GLU LEU LEU GLN GLN GLN PRO ASP LEU ASP ALA ILE LEU SEQRES 15 B 329 VAL SER VAL SER ALA GLY GLY MET ALA SER GLY ILE CYS SEQRES 16 B 329 VAL TYR THR LYS ASN THR LYS SER ASP LEU LYS VAL PHE SEQRES 17 B 329 LEU VAL GLU PRO GLU GLY LYS MET LEU GLU GLU CYS ILE SEQRES 18 B 329 SER LYS ARG GLU ARG LEU TRP PRO ASN PRO PRO GLN PHE SEQRES 19 B 329 LEU ASP THR ILE ALA ASP GLY ILE ILE LEU GLN GLN CYS SEQRES 20 B 329 GLY ASN LYS THR TRP PRO ILE ILE LEU GLU LEU PRO GLU SEQRES 21 B 329 LYS GLU VAL ILE THR VAL ASN ASN ASP ASN ILE VAL GLU SEQRES 22 B 329 ALA MET ARG PHE VAL PHE ALA ARG MET LYS LEU VAL ILE SEQRES 23 B 329 GLU ALA ALA ALA GLY ALA THR VAL ALA ALA ALA MET THR SEQRES 24 B 329 GLU ARG PHE GLN ASN PHE HIS PRO GLU ALA LYS LYS VAL SEQRES 25 B 329 GLY ILE ILE LEU CYS GLY GLY ASN VAL ASP ILE GLU LYS SEQRES 26 B 329 LEU PRO TRP THR MODRES 5YBW LLP A 63 LYS MODIFIED RESIDUE MODRES 5YBW LLP B 63 LYS MODIFIED RESIDUE HET LLP A 63 24 HET LLP B 63 24 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 HOH *206(H2 O) HELIX 1 AA1 THR A 11 SER A 23 1 13 HELIX 2 AA2 SER A 34 SER A 43 1 10 HELIX 3 AA3 ASN A 55 SER A 61 5 7 HELIX 4 AA4 PHE A 62 GLU A 78 1 17 HELIX 5 AA5 GLY A 90 GLY A 104 1 15 HELIX 6 AA6 PRO A 116 TYR A 126 1 11 HELIX 7 AA7 ASN A 136 GLY A 152 1 17 HELIX 8 AA8 ASP A 161 GLN A 179 1 19 HELIX 9 AA9 GLY A 192 ASN A 204 1 13 HELIX 10 AB1 MET A 220 ARG A 228 1 9 HELIX 11 AB2 ALA A 243 ILE A 247 5 5 HELIX 12 AB3 THR A 255 LEU A 260 1 6 HELIX 13 AB4 ASN A 271 LYS A 287 1 17 HELIX 14 AB5 GLU A 291 THR A 303 1 13 HELIX 15 AB6 THR A 303 PHE A 309 1 7 HELIX 16 AB7 THR B 11 SER B 23 1 13 HELIX 17 AB8 SER B 34 GLY B 42 1 9 HELIX 18 AB9 ASN B 55 SER B 61 5 7 HELIX 19 AC1 PHE B 62 GLU B 78 1 17 HELIX 20 AC2 GLY B 90 ALA B 103 1 14 HELIX 21 AC3 PRO B 116 ASN B 125 1 10 HELIX 22 AC4 SER B 139 LEU B 147 1 9 HELIX 23 AC5 ASP B 161 GLN B 179 1 19 HELIX 24 AC6 GLY B 192 ASN B 204 1 13 HELIX 25 AC7 MET B 220 ARG B 228 1 9 HELIX 26 AC8 ALA B 243 ILE B 247 5 5 HELIX 27 AC9 THR B 255 LEU B 260 1 6 HELIX 28 AD1 ASN B 271 LYS B 287 1 17 HELIX 29 AD2 GLU B 291 THR B 303 1 13 HELIX 30 AD3 THR B 303 PHE B 309 1 7 SHEET 1 AA1 6 VAL A 31 PHE A 32 0 SHEET 2 AA1 6 GLN A 48 ALA A 53 -1 O PHE A 51 N PHE A 32 SHEET 3 AA1 6 LYS A 315 LEU A 320 1 O ILE A 318 N TYR A 50 SHEET 4 AA1 6 ALA A 184 SER A 188 1 N ALA A 184 O GLY A 317 SHEET 5 AA1 6 LYS A 210 PRO A 216 1 O PHE A 212 N ILE A 185 SHEET 6 AA1 6 ILE A 268 VAL A 270 1 O ILE A 268 N GLU A 215 SHEET 1 AA2 4 GLU A 129 CYS A 133 0 SHEET 2 AA2 4 LYS A 106 PRO A 112 1 N VAL A 109 O GLU A 129 SHEET 3 AA2 4 GLY A 83 HIS A 87 1 N THR A 86 O VAL A 110 SHEET 4 AA2 4 LYS A 154 TYR A 155 1 O LYS A 154 N GLY A 83 SHEET 1 AA3 6 VAL B 31 PHE B 32 0 SHEET 2 AA3 6 GLN B 48 ALA B 53 -1 O PHE B 51 N PHE B 32 SHEET 3 AA3 6 LYS B 315 LEU B 320 1 O ILE B 318 N LYS B 52 SHEET 4 AA3 6 ALA B 184 SER B 188 1 N ALA B 184 O GLY B 317 SHEET 5 AA3 6 LYS B 210 PRO B 216 1 O PHE B 212 N ILE B 185 SHEET 6 AA3 6 ILE B 268 VAL B 270 1 O ILE B 268 N GLU B 215 SHEET 1 AA4 4 GLU B 129 LYS B 132 0 SHEET 2 AA4 4 CYS B 107 VAL B 111 1 N VAL B 111 O VAL B 131 SHEET 3 AA4 4 VAL B 84 HIS B 87 1 N THR B 86 O VAL B 110 SHEET 4 AA4 4 LYS B 154 TYR B 155 1 O LYS B 154 N VAL B 85 LINK C PHE A 62 N LLP A 63 1555 1555 1.34 LINK C LLP A 63 N ALA A 64 1555 1555 1.34 LINK C PHE B 62 N LLP B 63 1555 1555 1.34 LINK C LLP B 63 N ALA B 64 1555 1555 1.33 CISPEP 1 ASN A 234 PRO A 235 0 -2.46 CISPEP 2 ASN B 234 PRO B 235 0 -1.39 CRYST1 94.181 80.708 87.991 90.00 116.22 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010618 0.000000 0.005230 0.00000 SCALE2 0.000000 0.012390 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012669 0.00000