HEADER METAL BINDING PROTEIN 28-SEP-17 5YHE TITLE THE CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS CNTA IN COMPLEX WITH TITLE 2 STAPHYLOPINE AND COBALT COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICKEL ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: OPP-1A, AYM28_13740, AYM37_13740, ERS072738_00487, SOURCE 5 ERS074020_00717, HMPREF3211_02361; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RECEPTOR, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.SONG,Q.JI REVDAT 4 27-MAR-24 5YHE 1 REMARK REVDAT 3 25-APR-18 5YHE 1 JRNL REVDAT 2 11-APR-18 5YHE 1 JRNL REVDAT 1 28-MAR-18 5YHE 0 JRNL AUTH L.SONG,Y.ZHANG,W.CHEN,T.GU,S.Y.ZHANG,Q.JI JRNL TITL MECHANISTIC INSIGHTS INTO STAPHYLOPINE-MEDIATED METAL JRNL TITL 2 ACQUISITION JRNL REF PROC. NATL. ACAD. SCI. V. 115 3942 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29581261 JRNL DOI 10.1073/PNAS.1718382115 REMARK 2 REMARK 2 RESOLUTION. 2.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 37019 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1839 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7799 - 5.7884 0.98 2726 144 0.1328 0.1662 REMARK 3 2 5.7884 - 4.5973 0.99 2699 156 0.1342 0.1769 REMARK 3 3 4.5973 - 4.0170 0.99 2742 147 0.1228 0.2107 REMARK 3 4 4.0170 - 3.6500 0.99 2727 148 0.1496 0.2222 REMARK 3 5 3.6500 - 3.3886 0.98 2710 136 0.1605 0.2491 REMARK 3 6 3.3886 - 3.1890 0.98 2769 129 0.1771 0.2616 REMARK 3 7 3.1890 - 3.0293 0.98 2661 152 0.1927 0.2955 REMARK 3 8 3.0293 - 2.8975 0.98 2761 111 0.1937 0.2800 REMARK 3 9 2.8975 - 2.7860 0.98 2660 151 0.1955 0.3017 REMARK 3 10 2.7860 - 2.6899 0.98 2710 144 0.1939 0.2899 REMARK 3 11 2.6899 - 2.6058 0.97 2687 136 0.2093 0.3058 REMARK 3 12 2.6058 - 2.5314 0.98 2708 146 0.2154 0.2851 REMARK 3 13 2.5314 - 2.4647 0.94 2620 139 0.2388 0.3258 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 8269 REMARK 3 ANGLE : 0.995 11092 REMARK 3 CHIRALITY : 0.055 1177 REMARK 3 PLANARITY : 0.006 1444 REMARK 3 DIHEDRAL : 17.842 5089 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YHE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1300005276. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37030 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.465 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BICINE PH 8.5, 8%(W/V) REMARK 280 POLYETHYLENE GLYCOL MONOMETHYL ETHER 5000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 336 REMARK 465 ASP A 337 REMARK 465 MET B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 26 -167.10 -117.89 REMARK 500 LEU A 52 -94.58 -139.92 REMARK 500 TYR A 129 98.85 -165.86 REMARK 500 PHE A 162 72.83 -115.06 REMARK 500 GLU A 177 -58.03 -123.37 REMARK 500 GLU A 190 97.76 -58.74 REMARK 500 ALA A 204 -169.37 -73.29 REMARK 500 LEU B 52 -100.26 -145.82 REMARK 500 ARG B 71 150.84 -49.55 REMARK 500 TYR B 129 100.34 -163.39 REMARK 500 PRO B 131 1.02 -69.34 REMARK 500 PHE B 162 61.26 -119.26 REMARK 500 GLU B 177 -61.84 -140.37 REMARK 500 GLU B 190 99.50 -63.49 REMARK 500 ALA B 204 -163.41 -72.93 REMARK 500 ILE B 309 -87.58 -98.61 REMARK 500 ILE B 474 -66.72 -123.23 REMARK 500 LYS B 489 38.30 71.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 895 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 896 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 897 DISTANCE = 8.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 605 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 8UX A 604 O REMARK 620 2 8UX A 604 C 24.3 REMARK 620 3 8UX A 604 N 84.3 60.7 REMARK 620 4 8UX A 604 CAV 104.4 80.7 33.7 REMARK 620 5 8UX A 604 CAR 100.4 84.2 64.1 34.5 REMARK 620 6 8UX A 604 OAF 94.3 88.4 90.2 62.3 27.8 REMARK 620 7 8UX A 604 NAN 178.4 155.9 95.6 76.2 80.9 87.2 REMARK 620 8 8UX A 604 CAS 117.9 126.7 105.7 117.1 139.7 144.8 60.6 REMARK 620 9 8UX A 604 OAD 94.4 101.9 96.5 120.8 153.9 169.5 84.1 25.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 603 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 8UX B 602 C REMARK 620 2 8UX B 602 OXT 22.4 REMARK 620 3 8UX B 602 N 58.6 80.7 REMARK 620 4 8UX B 602 CAR 81.5 95.9 60.6 REMARK 620 5 8UX B 602 OAF 80.3 86.3 81.4 24.9 REMARK 620 6 8UX B 602 NAN 148.0 170.3 90.1 76.9 89.5 REMARK 620 7 8UX B 602 CAW 156.8 154.0 108.5 109.9 118.7 33.1 REMARK 620 8 8UX B 602 CAS 125.4 120.7 103.7 138.4 152.9 64.2 34.2 REMARK 620 9 8UX B 602 OAG 98.5 94.4 93.8 150.2 175.0 89.1 61.3 27.2 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8UX A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8UX B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 603 DBREF1 5YHE A 1 507 UNP A0A068A9N4_STAAU DBREF2 5YHE A A0A068A9N4 26 532 DBREF1 5YHE B 1 507 UNP A0A068A9N4_STAAU DBREF2 5YHE B A0A068A9N4 26 532 SEQADV 5YHE MET A 0 UNP A0A068A9N INITIATING METHIONINE SEQADV 5YHE MET B 0 UNP A0A068A9N INITIATING METHIONINE SEQRES 1 A 508 MET GLY LEU GLU GLU LYS LYS GLU ASN LYS GLN LEU THR SEQRES 2 A 508 TYR THR THR VAL LYS ASP ILE GLY ASP MET ASN PRO HIS SEQRES 3 A 508 VAL TYR GLY GLY SER MET SER ALA GLU SER MET ILE TYR SEQRES 4 A 508 GLU PRO LEU VAL ARG ASN THR LYS ASP GLY ILE LYS PRO SEQRES 5 A 508 LEU LEU ALA LYS LYS TRP ASP VAL SER GLU ASP GLY LYS SEQRES 6 A 508 THR TYR THR PHE HIS LEU ARG ASP ASP VAL LYS PHE HIS SEQRES 7 A 508 ASP GLY THR PRO PHE ASP ALA ASP ALA VAL LYS LYS ASN SEQRES 8 A 508 ILE ASP ALA VAL GLN GLU ASN LYS LYS LEU HIS SER TRP SEQRES 9 A 508 LEU LYS ILE SER THR LEU ILE ASP ASN VAL LYS VAL LYS SEQRES 10 A 508 ASP LYS TYR THR VAL GLU LEU ASN LEU LYS GLU ALA TYR SEQRES 11 A 508 GLN PRO ALA LEU ALA GLU LEU ALA MET PRO ARG PRO TYR SEQRES 12 A 508 VAL PHE VAL SER PRO LYS ASP PHE LYS ASN GLY THR THR SEQRES 13 A 508 LYS ASP GLY VAL LYS LYS PHE ASP GLY THR GLY PRO PHE SEQRES 14 A 508 LYS LEU GLY GLU HIS LYS LYS ASP GLU SER ALA ASP PHE SEQRES 15 A 508 ASN LYS ASN ASP GLN TYR TRP GLY GLU LYS SER LYS LEU SEQRES 16 A 508 ASN LYS VAL GLN ALA LYS VAL MET PRO ALA GLY GLU THR SEQRES 17 A 508 ALA PHE LEU SER MET LYS LYS GLY GLU THR ASN PHE ALA SEQRES 18 A 508 PHE THR ASP ASP ARG GLY THR ASP SER LEU ASP LYS ASP SEQRES 19 A 508 SER LEU LYS GLN LEU LYS ASP THR GLY ASP TYR GLN VAL SEQRES 20 A 508 LYS ARG SER GLN PRO MET ASN THR LYS MET LEU VAL VAL SEQRES 21 A 508 ASN SER GLY LYS LYS ASP ASN ALA VAL SER ASP LYS THR SEQRES 22 A 508 VAL ARG GLN ALA ILE GLY HIS MET VAL ASN ARG ASP LYS SEQRES 23 A 508 ILE ALA LYS GLU ILE LEU ASP GLY GLN GLU LYS PRO ALA SEQRES 24 A 508 THR GLN LEU PHE ALA LYS ASN VAL THR ASP ILE ASN PHE SEQRES 25 A 508 ASP MET PRO THR ARG LYS TYR ASP LEU LYS LYS ALA GLU SEQRES 26 A 508 SER LEU LEU ASP GLU ALA GLY TRP LYS LYS GLY LYS ASP SEQRES 27 A 508 SER ASP VAL ARG GLN LYS ASP GLY LYS ASN LEU GLU MET SEQRES 28 A 508 ALA MET TYR TYR ASP LYS GLY SER SER SER GLN LYS GLU SEQRES 29 A 508 GLN ALA GLU TYR LEU GLN ALA GLU PHE LYS LYS MET GLY SEQRES 30 A 508 ILE LYS LEU ASN ILE ASN GLY GLU THR SER ASP LYS ILE SEQRES 31 A 508 ALA GLU ARG ARG THR SER GLY ASP TYR ASP LEU MET PHE SEQRES 32 A 508 ASN GLN THR TRP GLY LEU LEU TYR ASP PRO GLN SER THR SEQRES 33 A 508 ILE ALA ALA PHE LYS ALA LYS ASN GLY TYR GLU SER ALA SEQRES 34 A 508 THR SER GLY ILE GLU ASN LYS ASP LYS ILE TYR ASN SER SEQRES 35 A 508 ILE ASP ASP ALA PHE LYS ILE GLN ASN GLY LYS GLU ARG SEQRES 36 A 508 SER ASP ALA TYR LYS ASN ILE LEU LYS GLN ILE ASP ASP SEQRES 37 A 508 GLU GLY ILE PHE ILE PRO ILE SER HIS GLY SER MET THR SEQRES 38 A 508 VAL VAL ALA PRO LYS ASP LEU GLU LYS VAL SER PHE THR SEQRES 39 A 508 GLN SER GLN TYR GLU LEU PRO PHE ASN GLU MET GLN TYR SEQRES 40 A 508 LYS SEQRES 1 B 508 MET GLY LEU GLU GLU LYS LYS GLU ASN LYS GLN LEU THR SEQRES 2 B 508 TYR THR THR VAL LYS ASP ILE GLY ASP MET ASN PRO HIS SEQRES 3 B 508 VAL TYR GLY GLY SER MET SER ALA GLU SER MET ILE TYR SEQRES 4 B 508 GLU PRO LEU VAL ARG ASN THR LYS ASP GLY ILE LYS PRO SEQRES 5 B 508 LEU LEU ALA LYS LYS TRP ASP VAL SER GLU ASP GLY LYS SEQRES 6 B 508 THR TYR THR PHE HIS LEU ARG ASP ASP VAL LYS PHE HIS SEQRES 7 B 508 ASP GLY THR PRO PHE ASP ALA ASP ALA VAL LYS LYS ASN SEQRES 8 B 508 ILE ASP ALA VAL GLN GLU ASN LYS LYS LEU HIS SER TRP SEQRES 9 B 508 LEU LYS ILE SER THR LEU ILE ASP ASN VAL LYS VAL LYS SEQRES 10 B 508 ASP LYS TYR THR VAL GLU LEU ASN LEU LYS GLU ALA TYR SEQRES 11 B 508 GLN PRO ALA LEU ALA GLU LEU ALA MET PRO ARG PRO TYR SEQRES 12 B 508 VAL PHE VAL SER PRO LYS ASP PHE LYS ASN GLY THR THR SEQRES 13 B 508 LYS ASP GLY VAL LYS LYS PHE ASP GLY THR GLY PRO PHE SEQRES 14 B 508 LYS LEU GLY GLU HIS LYS LYS ASP GLU SER ALA ASP PHE SEQRES 15 B 508 ASN LYS ASN ASP GLN TYR TRP GLY GLU LYS SER LYS LEU SEQRES 16 B 508 ASN LYS VAL GLN ALA LYS VAL MET PRO ALA GLY GLU THR SEQRES 17 B 508 ALA PHE LEU SER MET LYS LYS GLY GLU THR ASN PHE ALA SEQRES 18 B 508 PHE THR ASP ASP ARG GLY THR ASP SER LEU ASP LYS ASP SEQRES 19 B 508 SER LEU LYS GLN LEU LYS ASP THR GLY ASP TYR GLN VAL SEQRES 20 B 508 LYS ARG SER GLN PRO MET ASN THR LYS MET LEU VAL VAL SEQRES 21 B 508 ASN SER GLY LYS LYS ASP ASN ALA VAL SER ASP LYS THR SEQRES 22 B 508 VAL ARG GLN ALA ILE GLY HIS MET VAL ASN ARG ASP LYS SEQRES 23 B 508 ILE ALA LYS GLU ILE LEU ASP GLY GLN GLU LYS PRO ALA SEQRES 24 B 508 THR GLN LEU PHE ALA LYS ASN VAL THR ASP ILE ASN PHE SEQRES 25 B 508 ASP MET PRO THR ARG LYS TYR ASP LEU LYS LYS ALA GLU SEQRES 26 B 508 SER LEU LEU ASP GLU ALA GLY TRP LYS LYS GLY LYS ASP SEQRES 27 B 508 SER ASP VAL ARG GLN LYS ASP GLY LYS ASN LEU GLU MET SEQRES 28 B 508 ALA MET TYR TYR ASP LYS GLY SER SER SER GLN LYS GLU SEQRES 29 B 508 GLN ALA GLU TYR LEU GLN ALA GLU PHE LYS LYS MET GLY SEQRES 30 B 508 ILE LYS LEU ASN ILE ASN GLY GLU THR SER ASP LYS ILE SEQRES 31 B 508 ALA GLU ARG ARG THR SER GLY ASP TYR ASP LEU MET PHE SEQRES 32 B 508 ASN GLN THR TRP GLY LEU LEU TYR ASP PRO GLN SER THR SEQRES 33 B 508 ILE ALA ALA PHE LYS ALA LYS ASN GLY TYR GLU SER ALA SEQRES 34 B 508 THR SER GLY ILE GLU ASN LYS ASP LYS ILE TYR ASN SER SEQRES 35 B 508 ILE ASP ASP ALA PHE LYS ILE GLN ASN GLY LYS GLU ARG SEQRES 36 B 508 SER ASP ALA TYR LYS ASN ILE LEU LYS GLN ILE ASP ASP SEQRES 37 B 508 GLU GLY ILE PHE ILE PRO ILE SER HIS GLY SER MET THR SEQRES 38 B 508 VAL VAL ALA PRO LYS ASP LEU GLU LYS VAL SER PHE THR SEQRES 39 B 508 GLN SER GLN TYR GLU LEU PRO PHE ASN GLU MET GLN TYR SEQRES 40 B 508 LYS HET CL A 601 1 HET ACT A 602 4 HET ACT A 603 4 HET 8UX A 604 23 HET CO A 605 1 HET ACT B 601 4 HET 8UX B 602 23 HET CO B 603 1 HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETNAM 8UX (2~{S})-4-[[(2~{R})-3-(1~{H}-IMIDAZOL-4-YL)-1-OXIDANYL- HETNAM 2 8UX 1-OXIDANYLIDENE-PROPAN-2-YL]AMINO]-2-[[(2~{S})-1- HETNAM 3 8UX OXIDANYL-1-OXIDANYLIDENE-PROPAN-2-YL]AMINO]BUTANOIC HETNAM 4 8UX ACID HETNAM CO COBALT (II) ION HETSYN 8UX STAPHYLOPINE FORMUL 3 CL CL 1- FORMUL 4 ACT 3(C2 H3 O2 1-) FORMUL 6 8UX 2(C13 H20 N4 O6) FORMUL 7 CO 2(CO 2+) FORMUL 11 HOH *395(H2 O) HELIX 1 AA1 MET A 0 ASN A 8 1 9 HELIX 2 AA2 SER A 30 TYR A 38 1 9 HELIX 3 AA3 ASP A 83 ASN A 97 1 15 HELIX 4 AA4 LYS A 98 SER A 102 5 5 HELIX 5 AA5 LYS A 105 LEU A 109 1 5 HELIX 6 AA6 PRO A 131 ALA A 137 1 7 HELIX 7 AA7 SER A 146 LYS A 148 5 3 HELIX 8 AA8 GLY A 205 LYS A 214 1 10 HELIX 9 AA9 ASP A 231 ASP A 240 1 10 HELIX 10 AB1 ASN A 266 SER A 269 5 4 HELIX 11 AB2 ASP A 270 GLY A 278 1 9 HELIX 12 AB3 ASN A 282 GLU A 289 1 8 HELIX 13 AB4 ASP A 319 ALA A 330 1 12 HELIX 14 AB5 SER A 358 GLY A 376 1 19 HELIX 15 AB6 THR A 385 GLY A 396 1 12 HELIX 16 AB7 PRO A 412 ALA A 418 1 7 HELIX 17 AB8 PHE A 419 ALA A 421 5 3 HELIX 18 AB9 TYR A 425 SER A 430 1 6 HELIX 19 AC1 ASN A 434 PHE A 446 1 13 HELIX 20 AC2 ASN A 450 GLY A 469 1 20 HELIX 21 AC3 PRO A 500 MET A 504 5 5 HELIX 22 AC4 LEU B 2 ASN B 8 1 7 HELIX 23 AC5 SER B 30 TYR B 38 1 9 HELIX 24 AC6 ASP B 83 GLU B 96 1 14 HELIX 25 AC7 ASN B 97 SER B 102 5 6 HELIX 26 AC8 LYS B 105 LEU B 109 1 5 HELIX 27 AC9 PRO B 131 ALA B 137 1 7 HELIX 28 AD1 SER B 146 LYS B 148 5 3 HELIX 29 AD2 ALA B 204 LYS B 214 1 11 HELIX 30 AD3 ASP B 231 ASP B 240 1 10 HELIX 31 AD4 ASN B 266 SER B 269 5 4 HELIX 32 AD5 ASP B 270 GLY B 278 1 9 HELIX 33 AD6 ASN B 282 ILE B 290 1 9 HELIX 34 AD7 ASP B 319 GLY B 331 1 13 HELIX 35 AD8 SER B 358 MET B 375 1 18 HELIX 36 AD9 THR B 385 GLY B 396 1 12 HELIX 37 AE1 PRO B 412 ALA B 418 1 7 HELIX 38 AE2 PHE B 419 ALA B 421 5 3 HELIX 39 AE3 TYR B 425 SER B 430 1 6 HELIX 40 AE4 ASN B 434 PHE B 446 1 13 HELIX 41 AE5 ASN B 450 GLY B 469 1 20 SHEET 1 AA1 4 GLN A 10 THR A 15 0 SHEET 2 AA1 4 LYS A 196 VAL A 201 1 O LYS A 200 N TYR A 13 SHEET 3 AA1 4 SER A 178 LYS A 183 -1 N ALA A 179 O ALA A 199 SHEET 4 AA1 4 PHE A 168 LYS A 174 -1 N GLU A 172 O ASP A 180 SHEET 1 AA2 2 VAL A 42 THR A 45 0 SHEET 2 AA2 2 GLY A 48 PRO A 51 -1 O LYS A 50 N ARG A 43 SHEET 1 AA3 4 ALA A 54 VAL A 59 0 SHEET 2 AA3 4 THR A 65 LEU A 70 -1 O HIS A 69 N LYS A 56 SHEET 3 AA3 4 THR A 120 LEU A 125 -1 O VAL A 121 N PHE A 68 SHEET 4 AA3 4 ILE A 110 ASP A 117 -1 N ASP A 117 O THR A 120 SHEET 1 AA4 2 PHE A 150 LYS A 151 0 SHEET 2 AA4 2 THR A 154 VAL A 159 -1 O THR A 154 N LYS A 151 SHEET 1 AA5 6 ALA A 220 PHE A 221 0 SHEET 2 AA5 6 PHE A 471 PRO A 484 -1 O VAL A 482 N ALA A 220 SHEET 3 AA5 6 TYR A 244 VAL A 259 -1 N LEU A 257 O ILE A 472 SHEET 4 AA5 6 LEU A 400 GLN A 404 -1 O MET A 401 N VAL A 258 SHEET 5 AA5 6 GLU A 349 ASP A 355 1 N TYR A 353 O PHE A 402 SHEET 6 AA5 6 LYS A 378 GLU A 384 1 O ASN A 380 N MET A 350 SHEET 1 AA6 3 LYS A 333 LYS A 334 0 SHEET 2 AA6 3 ARG A 341 LYS A 343 -1 O GLN A 342 N LYS A 333 SHEET 3 AA6 3 LYS A 346 ASN A 347 -1 O LYS A 346 N LYS A 343 SHEET 1 AA710 PHE B 168 LYS B 174 0 SHEET 2 AA710 SER B 178 LYS B 183 -1 O ASP B 180 N GLU B 172 SHEET 3 AA710 LYS B 196 VAL B 201 -1 O VAL B 197 N PHE B 181 SHEET 4 AA710 GLN B 10 THR B 15 1 N TYR B 13 O LYS B 200 SHEET 5 AA710 PHE B 219 PHE B 221 1 O PHE B 219 N THR B 14 SHEET 6 AA710 PHE B 471 PRO B 484 -1 O VAL B 482 N ALA B 220 SHEET 7 AA710 TYR B 244 VAL B 259 -1 N SER B 249 O MET B 479 SHEET 8 AA710 LEU B 400 GLN B 404 -1 O MET B 401 N VAL B 258 SHEET 9 AA710 GLU B 349 ASP B 355 1 N TYR B 353 O PHE B 402 SHEET 10 AA710 LYS B 378 GLU B 384 1 O ASN B 380 N MET B 350 SHEET 1 AA8 2 VAL B 42 THR B 45 0 SHEET 2 AA8 2 GLY B 48 PRO B 51 -1 O LYS B 50 N ARG B 43 SHEET 1 AA9 4 ALA B 54 VAL B 59 0 SHEET 2 AA9 4 THR B 65 LEU B 70 -1 O HIS B 69 N LYS B 56 SHEET 3 AA9 4 THR B 120 LEU B 125 -1 O VAL B 121 N PHE B 68 SHEET 4 AA9 4 ILE B 110 ASP B 117 -1 N ASP B 117 O THR B 120 SHEET 1 AB1 2 PHE B 150 LYS B 151 0 SHEET 2 AB1 2 THR B 154 VAL B 159 -1 O THR B 154 N LYS B 151 SHEET 1 AB2 3 LYS B 333 LYS B 334 0 SHEET 2 AB2 3 ARG B 341 LYS B 343 -1 O GLN B 342 N LYS B 333 SHEET 3 AB2 3 LYS B 346 ASN B 347 -1 O LYS B 346 N LYS B 343 LINK O 8UX A 604 CO CO A 605 1555 1555 1.75 LINK C 8UX A 604 CO CO A 605 1555 1555 2.63 LINK N 8UX A 604 CO CO A 605 1555 1555 2.44 LINK CAV 8UX A 604 CO CO A 605 1555 1555 2.66 LINK CAR 8UX A 604 CO CO A 605 1555 1555 2.50 LINK OAF 8UX A 604 CO CO A 605 1555 1555 1.75 LINK NAN 8UX A 604 CO CO A 605 1555 1555 2.29 LINK CAS 8UX A 604 CO CO A 605 1555 1555 2.69 LINK OAD 8UX A 604 CO CO A 605 1555 1555 1.89 LINK NAP 8UX A 604 CO CO A 605 1555 1555 2.16 LINK C 8UX B 602 CO CO B 603 1555 1555 2.72 LINK OXT 8UX B 602 CO CO B 603 1555 1555 1.80 LINK N 8UX B 602 CO CO B 603 1555 1555 2.54 LINK CAR 8UX B 602 CO CO B 603 1555 1555 2.67 LINK OAF 8UX B 602 CO CO B 603 1555 1555 1.90 LINK NAN 8UX B 602 CO CO B 603 1555 1555 2.20 LINK CAW 8UX B 602 CO CO B 603 1555 1555 2.71 LINK CAS 8UX B 602 CO CO B 603 1555 1555 2.56 LINK OAG 8UX B 602 CO CO B 603 1555 1555 1.80 LINK NAP 8UX B 602 CO CO B 603 1555 1555 2.00 CISPEP 1 ARG A 140 PRO A 141 0 -0.62 CISPEP 2 ASP A 411 PRO A 412 0 -3.85 CISPEP 3 ARG B 140 PRO B 141 0 1.44 CISPEP 4 ASP B 411 PRO B 412 0 -1.26 SITE 1 AC1 1 ARG A 316 SITE 1 AC2 6 LYS A 105 TYR A 129 GLU A 135 GLN A 413 SITE 2 AC2 6 PHE A 446 HOH A 764 SITE 1 AC3 2 LYS A 239 GLU B 371 SITE 1 AC4 14 TYR A 27 TRP A 103 ARG A 140 ASP A 224 SITE 2 AC4 14 ARG A 225 ARG A 393 TRP A 406 ASN A 423 SITE 3 AC4 14 TYR A 497 CO A 605 HOH A 736 HOH A 802 SITE 4 AC4 14 HOH A 817 HOH A 835 SITE 1 AC5 1 8UX A 604 SITE 1 AC6 6 SER B 441 ALA B 445 ALA B 457 ILE B 461 SITE 2 AC6 6 HOH B 799 HOH B 877 SITE 1 AC7 14 TYR B 27 TRP B 103 ARG B 140 ASP B 224 SITE 2 AC7 14 ARG B 225 ARG B 393 TRP B 406 ASN B 423 SITE 3 AC7 14 TYR B 497 CO B 603 HOH B 751 HOH B 762 SITE 4 AC7 14 HOH B 766 HOH B 784 SITE 1 AC8 1 8UX B 602 CRYST1 42.605 76.659 85.673 90.68 91.25 104.57 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023471 0.006100 0.000622 0.00000 SCALE2 0.000000 0.013478 0.000243 0.00000 SCALE3 0.000000 0.000000 0.011677 0.00000