HEADER TRANSFERASE 09-OCT-17 5YJ9 TITLE CRYSTAL STRUCTURE OF TRIBOLIUM CASTANEUM PINK1 KINASE DOMAIN IN TITLE 2 COMPLEX WITH AMP-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PINK1, MITOCHONDRIAL-LIKE COMPND 3 PROTEIN; COMPND 4 CHAIN: D; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRIBOLIUM CASTANEUM; SOURCE 3 ORGANISM_COMMON: RED FLOUR BEETLE; SOURCE 4 ORGANISM_TAXID: 7070; SOURCE 5 GENE: TCASGA2_TC013202; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN KINASE, MITOCHONDRIA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.OKATSU,Y.SATO,S.FUKAI REVDAT 1 25-JUL-18 5YJ9 0 JRNL AUTH K.OKATSU,Y.SATO,K.YAMANO,N.MATSUDA,L.NEGISHI,A.TAKAHASHI, JRNL AUTH 2 A.YAMAGATA,S.GOTO-ITO,M.MISHIMA,Y.ITO,T.OKA,K.TANAKA,S.FUKAI JRNL TITL STRUCTURAL INSIGHTS INTO UBIQUITIN PHOSPHORYLATION BY PINK1. JRNL REF SCI REP V. 8 10382 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29991771 JRNL DOI 10.1038/S41598-018-28656-8 REMARK 2 REMARK 2 RESOLUTION. 2.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.480 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 12625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.7538 - 4.3256 0.94 2489 129 0.2162 0.2252 REMARK 3 2 4.3256 - 3.4336 0.95 2457 152 0.2146 0.2193 REMARK 3 3 3.4336 - 2.9997 0.94 2453 114 0.2344 0.2801 REMARK 3 4 2.9997 - 2.7254 0.93 2434 113 0.2678 0.2629 REMARK 3 5 2.7254 - 2.5301 0.85 2139 145 0.2951 0.3517 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2834 REMARK 3 ANGLE : 1.012 3854 REMARK 3 CHIRALITY : 0.068 434 REMARK 3 PLANARITY : 0.004 481 REMARK 3 DIHEDRAL : 13.537 1050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 46.9343 44.2287 7.9071 REMARK 3 T TENSOR REMARK 3 T11: 0.1982 T22: 0.2996 REMARK 3 T33: 0.1538 T12: -0.0076 REMARK 3 T13: -0.0306 T23: -0.0233 REMARK 3 L TENSOR REMARK 3 L11: 3.6891 L22: 2.8590 REMARK 3 L33: 1.6302 L12: -0.1563 REMARK 3 L13: 0.2194 L23: 0.3124 REMARK 3 S TENSOR REMARK 3 S11: 0.1039 S12: -0.4298 S13: 0.5524 REMARK 3 S21: 0.1963 S22: -0.0346 S23: -0.1131 REMARK 3 S31: -0.2293 S32: -0.1819 S33: -0.0403 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YJ9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1300005383. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13138 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.54500 REMARK 200 FOR SHELL : 1.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CALCIUM ACETATE, PEG 400, PH 7, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 69.01400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.89500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 69.01400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.89500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY D 148 REMARK 465 PRO D 149 REMARK 465 LEU D 150 REMARK 465 GLY D 151 REMARK 465 SER D 152 REMARK 465 GLU D 153 REMARK 465 SER D 154 REMARK 465 ASN D 155 REMARK 465 PRO D 156 REMARK 465 ILE D 157 REMARK 465 THR D 158 REMARK 465 LEU D 159 REMARK 465 ASN D 160 REMARK 465 ASP D 161 REMARK 465 LEU D 162 REMARK 465 SER D 163 REMARK 465 LEU D 164 REMARK 465 GLY D 165 REMARK 465 ASP D 184 REMARK 465 GLU D 185 REMARK 465 THR D 186 REMARK 465 ASP D 187 REMARK 465 ASP D 188 REMARK 465 ASN D 189 REMARK 465 LYS D 190 REMARK 465 SER D 226 REMARK 465 ASN D 227 REMARK 465 HIS D 228 REMARK 465 ASP D 229 REMARK 465 LEU D 230 REMARK 465 ASN D 231 REMARK 465 ASN D 232 REMARK 465 TRP D 233 REMARK 465 GLU D 234 REMARK 465 ILE D 235 REMARK 465 GLU D 236 REMARK 465 LEU D 237 REMARK 465 ALA D 238 REMARK 465 ASN D 239 REMARK 465 ARG D 240 REMARK 465 ARG D 241 REMARK 465 ASP D 259 REMARK 465 LEU D 260 REMARK 465 ILE D 261 REMARK 465 GLN D 262 REMARK 465 GLU D 263 REMARK 465 LEU D 264 REMARK 465 GLU D 265 REMARK 465 GLY D 266 REMARK 465 SER D 267 REMARK 465 LYS D 268 REMARK 465 ASP D 269 REMARK 465 LEU D 270 REMARK 465 TYR D 271 REMARK 465 PRO D 272 REMARK 465 ALA D 273 REMARK 465 ALA D 274 REMARK 465 LEU D 275 REMARK 465 PRO D 276 REMARK 465 PRO D 277 REMARK 465 ARG D 278 REMARK 465 LEU D 279 REMARK 465 HIS D 280 REMARK 465 PRO D 281 REMARK 465 GLU D 282 REMARK 465 GLY D 283 REMARK 465 GLU D 284 REMARK 465 GLY D 285 REMARK 465 ARG D 286 REMARK 465 ASN D 287 REMARK 465 GLU D 517 REMARK 465 GLY D 518 REMARK 465 LYS D 519 REMARK 465 ILE D 520 REMARK 465 ASN D 521 REMARK 465 ASN D 522 REMARK 465 LYS D 523 REMARK 465 SER D 524 REMARK 465 PHE D 525 REMARK 465 GLY D 526 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS D 382 OH TYR D 406 1.90 REMARK 500 O TYR D 375 OG SER D 402 2.10 REMARK 500 O1G ANP D 601 O HOH D 701 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS D 180 16.72 -157.15 REMARK 500 GLU D 379 28.97 43.58 REMARK 500 LEU D 569 47.08 70.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 217 OE2 REMARK 620 2 ASP D 359 OD1 75.7 REMARK 620 3 ASP D 359 OD2 117.7 51.3 REMARK 620 4 ANP D 601 O2B 91.9 110.6 80.5 REMARK 620 5 HOH D 703 O 115.4 73.9 82.2 152.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D 342 OD1 REMARK 620 2 ASP D 359 OD2 100.5 REMARK 620 3 ANP D 601 O1G 128.5 127.5 REMARK 620 4 ANP D 601 O1A 93.3 74.9 83.7 REMARK 620 5 HOH D 701 O 76.0 151.2 53.1 76.8 REMARK 620 6 HOH D 702 O 72.7 138.1 81.1 145.2 69.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP D 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 603 DBREF 5YJ9 D 153 570 UNP D6WMX4 D6WMX4_TRICA 153 570 SEQADV 5YJ9 GLY D 148 UNP D6WMX4 EXPRESSION TAG SEQADV 5YJ9 PRO D 149 UNP D6WMX4 EXPRESSION TAG SEQADV 5YJ9 LEU D 150 UNP D6WMX4 EXPRESSION TAG SEQADV 5YJ9 GLY D 151 UNP D6WMX4 EXPRESSION TAG SEQADV 5YJ9 SER D 152 UNP D6WMX4 EXPRESSION TAG SEQADV 5YJ9 ASP D 205 UNP D6WMX4 SER 205 ENGINEERED MUTATION SEQADV 5YJ9 ASP D 377 UNP D6WMX4 SER 377 ENGINEERED MUTATION SEQADV 5YJ9 GLU D 386 UNP D6WMX4 THR 386 ENGINEERED MUTATION SEQADV 5YJ9 GLU D 530 UNP D6WMX4 THR 530 ENGINEERED MUTATION SEQRES 1 D 423 GLY PRO LEU GLY SER GLU SER ASN PRO ILE THR LEU ASN SEQRES 2 D 423 ASP LEU SER LEU GLY LYS PRO ILE ALA LYS GLY THR ASN SEQRES 3 D 423 GLY VAL VAL TYR SER ALA LYS VAL LYS ASP ASP GLU THR SEQRES 4 D 423 ASP ASP ASN LYS TYR PRO PHE ALA LEU LYS MSE MSE PHE SEQRES 5 D 423 ASN TYR ASP ILE GLN ASP ASN SER MSE GLU ILE LEU LYS SEQRES 6 D 423 ALA MSE TYR ARG GLU THR VAL PRO ALA ARG MSE TYR TYR SEQRES 7 D 423 SER ASN HIS ASP LEU ASN ASN TRP GLU ILE GLU LEU ALA SEQRES 8 D 423 ASN ARG ARG LYS HIS LEU PRO PRO HIS PRO ASN ILE VAL SEQRES 9 D 423 ALA ILE PHE SER VAL PHE THR ASP LEU ILE GLN GLU LEU SEQRES 10 D 423 GLU GLY SER LYS ASP LEU TYR PRO ALA ALA LEU PRO PRO SEQRES 11 D 423 ARG LEU HIS PRO GLU GLY GLU GLY ARG ASN MSE SER LEU SEQRES 12 D 423 PHE LEU LEU MSE LYS ARG TYR ASP CYS ASN LEU GLN SER SEQRES 13 D 423 PHE LEU SER THR ALA PRO SER THR ARG THR SER LEU LEU SEQRES 14 D 423 LEU LEU ALA GLN LEU LEU GLU GLY VAL ALA HIS MSE THR SEQRES 15 D 423 ALA HIS GLY ILE ALA HIS ARG ASP LEU LYS SER ASP ASN SEQRES 16 D 423 LEU LEU LEU ASP THR SER GLU PRO GLU SER PRO ILE LEU SEQRES 17 D 423 VAL ILE SER ASP PHE GLY CYS CYS LEU ALA ASP LYS THR SEQRES 18 D 423 ASN GLY LEU SER LEU PRO TYR THR ASP TYR GLU MSE ASP SEQRES 19 D 423 LYS GLY GLY ASN GLU ALA LEU MSE ALA PRO GLU ILE ILE SEQRES 20 D 423 CYS GLN LYS PRO GLY THR PHE SER VAL LEU ASN TYR SER SEQRES 21 D 423 LYS ALA ASP LEU TRP ALA VAL GLY ALA ILE ALA TYR GLU SEQRES 22 D 423 ILE PHE ASN CYS HIS ASN PRO PHE TYR GLY PRO SER ARG SEQRES 23 D 423 LEU LYS ASN PHE ASN TYR LYS GLU GLY ASP LEU PRO LYS SEQRES 24 D 423 LEU PRO ASP GLU VAL PRO THR VAL ILE GLN ALA LEU VAL SEQRES 25 D 423 ALA ASN LEU LEU LYS ARG ASN PRO ASN LYS ARG LEU ASP SEQRES 26 D 423 PRO GLU VAL ALA ALA ASN VAL CYS GLN LEU PHE LEU TRP SEQRES 27 D 423 ALA PRO SER THR TRP LEU LYS PRO GLY LEU LYS VAL PRO SEQRES 28 D 423 THR SER GLY GLU ILE LEU GLN TRP LEU LEU SER LEU THR SEQRES 29 D 423 THR LYS VAL LEU CYS GLU GLY LYS ILE ASN ASN LYS SER SEQRES 30 D 423 PHE GLY GLU LYS PHE GLU ARG ASN TRP ARG ARG THR TYR SEQRES 31 D 423 PRO GLU TYR LEU LEU ILE SER SER PHE LEU CYS ARG ALA SEQRES 32 D 423 LYS LEU ALA ASN VAL ARG ASN ALA LEU HIS TRP ILE GLN SEQRES 33 D 423 GLU ASN LEU PRO GLU LEU ASP MODRES 5YJ9 MSE D 197 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 198 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 208 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 214 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 223 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 288 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 294 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 328 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 380 MET MODIFIED RESIDUE MODRES 5YJ9 MSE D 389 MET MODIFIED RESIDUE HET MSE D 197 8 HET MSE D 198 8 HET MSE D 208 8 HET MSE D 214 8 HET MSE D 223 8 HET MSE D 288 8 HET MSE D 294 8 HET MSE D 328 8 HET MSE D 380 8 HET MSE D 389 8 HET ANP D 601 31 HET MG D 602 1 HET MG D 603 1 HETNAM MSE SELENOMETHIONINE HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 2 ANP C10 H17 N6 O12 P3 FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *3(H2 O) HELIX 1 AA1 SER D 207 GLU D 217 1 11 HELIX 2 AA2 LEU D 301 LEU D 305 1 5 HELIX 3 AA3 SER D 310 HIS D 331 1 22 HELIX 4 AA4 ALA D 390 CYS D 395 1 6 HELIX 5 AA5 LYS D 408 PHE D 422 1 15 HELIX 6 AA6 LYS D 440 LEU D 444 5 5 HELIX 7 AA7 PRO D 452 LEU D 463 1 12 HELIX 8 AA8 ASN D 466 ARG D 470 5 5 HELIX 9 AA9 ASP D 472 ALA D 486 1 15 HELIX 10 AB1 PRO D 487 LYS D 492 5 6 HELIX 11 AB2 THR D 499 CYS D 516 1 18 HELIX 12 AB3 THR D 536 ARG D 549 1 14 HELIX 13 AB4 LYS D 551 ASN D 565 1 15 SHEET 1 AA1 5 PRO D 167 LYS D 170 0 SHEET 2 AA1 5 GLY D 174 ALA D 179 -1 O VAL D 176 N ILE D 168 SHEET 3 AA1 5 PHE D 193 PHE D 199 -1 O LEU D 195 N TYR D 177 SHEET 4 AA1 5 SER D 289 LYS D 295 -1 O LEU D 292 N LYS D 196 SHEET 5 AA1 5 ILE D 253 PHE D 257 -1 N PHE D 257 O PHE D 291 SHEET 1 AA2 3 CYS D 299 ASN D 300 0 SHEET 2 AA2 3 LEU D 343 ASP D 346 -1 O LEU D 345 N CYS D 299 SHEET 3 AA2 3 ILE D 354 ILE D 357 -1 O VAL D 356 N LEU D 344 SHEET 1 AA3 2 SER D 372 PRO D 374 0 SHEET 2 AA3 2 VAL D 403 ASN D 405 -1 O LEU D 404 N LEU D 373 SSBOND 1 CYS D 516 CYS D 548 1555 2655 2.03 LINK C LYS D 196 N MSE D 197 1555 1555 1.32 LINK C MSE D 197 N MSE D 198 1555 1555 1.33 LINK C MSE D 198 N PHE D 199 1555 1555 1.33 LINK C SER D 207 N MSE D 208 1555 1555 1.33 LINK C MSE D 208 N GLU D 209 1555 1555 1.33 LINK C ALA D 213 N MSE D 214 1555 1555 1.33 LINK C MSE D 214 N TYR D 215 1555 1555 1.33 LINK OE2 GLU D 217 MG MG D 602 1555 1555 2.89 LINK C ARG D 222 N MSE D 223 1555 1555 1.33 LINK C MSE D 223 N TYR D 224 1555 1555 1.33 LINK C MSE D 288 N SER D 289 1555 1555 1.33 LINK C LEU D 293 N MSE D 294 1555 1555 1.33 LINK C MSE D 294 N LYS D 295 1555 1555 1.33 LINK C HIS D 327 N MSE D 328 1555 1555 1.33 LINK C MSE D 328 N THR D 329 1555 1555 1.33 LINK OD1 ASN D 342 MG MG D 603 1555 1555 2.27 LINK OD1 ASP D 359 MG MG D 602 1555 1555 2.59 LINK OD2 ASP D 359 MG MG D 602 1555 1555 2.47 LINK OD2 ASP D 359 MG MG D 603 1555 1555 2.24 LINK C GLU D 379 N MSE D 380 1555 1555 1.32 LINK C MSE D 380 N ASP D 381 1555 1555 1.33 LINK C LEU D 388 N MSE D 389 1555 1555 1.33 LINK C MSE D 389 N ALA D 390 1555 1555 1.33 LINK O1G ANP D 601 MG MG D 603 1555 1555 2.56 LINK O2B ANP D 601 MG MG D 602 1555 1555 2.14 LINK O1A ANP D 601 MG MG D 603 1555 1555 2.09 LINK MG MG D 602 O HOH D 703 1555 1555 2.01 LINK MG MG D 603 O HOH D 701 1555 1555 2.22 LINK MG MG D 603 O HOH D 702 1555 1555 2.06 SITE 1 AC1 18 ALA D 169 ALA D 194 LYS D 196 GLU D 217 SITE 2 AC1 18 MSE D 294 LYS D 295 TYR D 297 ASN D 300 SITE 3 AC1 18 ASP D 341 ASN D 342 LEU D 344 ASP D 359 SITE 4 AC1 18 LYS D 446 ASP D 449 MG D 602 MG D 603 SITE 5 AC1 18 HOH D 701 HOH D 702 SITE 1 AC2 4 GLU D 217 ASP D 359 ANP D 601 HOH D 703 SITE 1 AC3 5 ASN D 342 ASP D 359 ANP D 601 HOH D 701 SITE 2 AC3 5 HOH D 702 CRYST1 138.028 59.790 50.822 90.00 101.82 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007245 0.000000 0.001516 0.00000 SCALE2 0.000000 0.016725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020103 0.00000