data_5YJO # _entry.id 5YJO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5YJO WWPDB D_1300005405 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5YJO _pdbx_database_status.recvd_initial_deposition_date 2017-10-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Baburajendran, N.' 1 ? 'Anna E, J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Med.Chem.Lett.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1948-5875 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 978 _citation.page_last 984 _citation.title 'Discovery of Irreversible Inhibitors Targeting Histone Methyltransferase, SMYD3.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acsmedchemlett.9b00170 _citation.pdbx_database_id_PubMed 31223458 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, C.' 1 ? primary 'Liew, S.S.' 2 ? primary 'Lin, G.R.' 3 ? primary 'Poulsen, A.' 4 ? primary 'Ang, M.J.Y.' 5 ? primary 'Chia, B.C.S.' 6 ? primary 'Chew, S.Y.' 7 ? primary 'Kwek, Z.P.' 8 ? primary 'Wee, J.L.K.' 9 ? primary 'Ong, E.H.' 10 ? primary 'Retna, P.' 11 ? primary 'Baburajendran, N.' 12 ? primary 'Li, R.' 13 ? primary 'Yu, W.' 14 ? primary 'Koh-Stenta, X.' 15 ? primary 'Ngo, A.' 16 ? primary 'Manesh, S.' 17 ? primary 'Fulwood, J.' 18 ? primary 'Ke, Z.' 19 ? primary 'Chung, H.H.' 20 ? primary 'Sepramaniam, S.' 21 ? primary 'Chew, X.H.' 22 ? primary 'Dinie, N.' 23 ? primary 'Lee, M.A.' 24 ? primary 'Chew, Y.S.' 25 ? primary 'Low, C.B.' 26 ? primary 'Pendharkar, V.' 27 ? primary 'Manoharan, V.' 28 ? primary 'Vuddagiri, S.' 29 ? primary 'Sangthongpitag, K.' 30 ? primary 'Joy, J.' 31 ? primary 'Matter, A.' 32 ? primary 'Hill, J.' 33 ? primary 'Keller, T.H.' 34 ? primary 'Foo, K.' 35 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5YJO _cell.details ? _cell.formula_units_Z ? _cell.length_a 61.428 _cell.length_a_esd ? _cell.length_b 66.181 _cell.length_b_esd ? _cell.length_c 107.648 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YJO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone-lysine N-methyltransferase SMYD3' 48602.457 1 2.1.1.43 ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 3 non-polymer syn 'propyl (3~{S})-4-[[(6~{R})-6-(aminomethyl)-5,6,7,8-tetrahydroacridin-3-yl]carbonyl]-3-methyl-piperazine-1-carboxylate' 424.536 1 ? ? ? ? 4 non-polymer syn S-ADENOSYLMETHIONINE 398.437 1 ? ? ? ? 5 water nat water 18.015 158 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'SET and MYND domain-containing protein 3,Zinc finger MYND domain-containing protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PLKVEKFATANRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPD HKRECKCLKSCKPRYPPDSVRLLGRVVFKLMDGAPSESEKLYSFYDLESNINKLTEDRKEGLRQLVMTFQHFMREEIQDA SQLPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDM LMTSEERRKQLRDQYCFECDCFRCQTQDKDADMLTGDEQVWKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPD INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV THGREHSLIEDLILLLEECDANI ; _entity_poly.pdbx_seq_one_letter_code_can ;PLKVEKFATANRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPD HKRECKCLKSCKPRYPPDSVRLLGRVVFKLMDGAPSESEKLYSFYDLESNINKLTEDRKEGLRQLVMTFQHFMREEIQDA SQLPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDM LMTSEERRKQLRDQYCFECDCFRCQTQDKDADMLTGDEQVWKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPD INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV THGREHSLIEDLILLLEECDANI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 LEU n 1 3 LYS n 1 4 VAL n 1 5 GLU n 1 6 LYS n 1 7 PHE n 1 8 ALA n 1 9 THR n 1 10 ALA n 1 11 ASN n 1 12 ARG n 1 13 GLY n 1 14 ASN n 1 15 GLY n 1 16 LEU n 1 17 ARG n 1 18 ALA n 1 19 VAL n 1 20 THR n 1 21 PRO n 1 22 LEU n 1 23 ARG n 1 24 PRO n 1 25 GLY n 1 26 GLU n 1 27 LEU n 1 28 LEU n 1 29 PHE n 1 30 ARG n 1 31 SER n 1 32 ASP n 1 33 PRO n 1 34 LEU n 1 35 ALA n 1 36 TYR n 1 37 THR n 1 38 VAL n 1 39 CYS n 1 40 LYS n 1 41 GLY n 1 42 SER n 1 43 ARG n 1 44 GLY n 1 45 VAL n 1 46 VAL n 1 47 CYS n 1 48 ASP n 1 49 ARG n 1 50 CYS n 1 51 LEU n 1 52 LEU n 1 53 GLY n 1 54 LYS n 1 55 GLU n 1 56 LYS n 1 57 LEU n 1 58 MET n 1 59 ARG n 1 60 CYS n 1 61 SER n 1 62 GLN n 1 63 CYS n 1 64 ARG n 1 65 VAL n 1 66 ALA n 1 67 LYS n 1 68 TYR n 1 69 CYS n 1 70 SER n 1 71 ALA n 1 72 LYS n 1 73 CYS n 1 74 GLN n 1 75 LYS n 1 76 LYS n 1 77 ALA n 1 78 TRP n 1 79 PRO n 1 80 ASP n 1 81 HIS n 1 82 LYS n 1 83 ARG n 1 84 GLU n 1 85 CYS n 1 86 LYS n 1 87 CYS n 1 88 LEU n 1 89 LYS n 1 90 SER n 1 91 CYS n 1 92 LYS n 1 93 PRO n 1 94 ARG n 1 95 TYR n 1 96 PRO n 1 97 PRO n 1 98 ASP n 1 99 SER n 1 100 VAL n 1 101 ARG n 1 102 LEU n 1 103 LEU n 1 104 GLY n 1 105 ARG n 1 106 VAL n 1 107 VAL n 1 108 PHE n 1 109 LYS n 1 110 LEU n 1 111 MET n 1 112 ASP n 1 113 GLY n 1 114 ALA n 1 115 PRO n 1 116 SER n 1 117 GLU n 1 118 SER n 1 119 GLU n 1 120 LYS n 1 121 LEU n 1 122 TYR n 1 123 SER n 1 124 PHE n 1 125 TYR n 1 126 ASP n 1 127 LEU n 1 128 GLU n 1 129 SER n 1 130 ASN n 1 131 ILE n 1 132 ASN n 1 133 LYS n 1 134 LEU n 1 135 THR n 1 136 GLU n 1 137 ASP n 1 138 ARG n 1 139 LYS n 1 140 GLU n 1 141 GLY n 1 142 LEU n 1 143 ARG n 1 144 GLN n 1 145 LEU n 1 146 VAL n 1 147 MET n 1 148 THR n 1 149 PHE n 1 150 GLN n 1 151 HIS n 1 152 PHE n 1 153 MET n 1 154 ARG n 1 155 GLU n 1 156 GLU n 1 157 ILE n 1 158 GLN n 1 159 ASP n 1 160 ALA n 1 161 SER n 1 162 GLN n 1 163 LEU n 1 164 PRO n 1 165 PRO n 1 166 ALA n 1 167 PHE n 1 168 ASP n 1 169 LEU n 1 170 PHE n 1 171 GLU n 1 172 ALA n 1 173 PHE n 1 174 ALA n 1 175 LYS n 1 176 VAL n 1 177 ILE n 1 178 CYS n 1 179 ASN n 1 180 SER n 1 181 PHE n 1 182 THR n 1 183 ILE n 1 184 CYS n 1 185 ASN n 1 186 ALA n 1 187 GLU n 1 188 MET n 1 189 GLN n 1 190 GLU n 1 191 VAL n 1 192 GLY n 1 193 VAL n 1 194 GLY n 1 195 LEU n 1 196 TYR n 1 197 PRO n 1 198 SER n 1 199 ILE n 1 200 SER n 1 201 LEU n 1 202 LEU n 1 203 ASN n 1 204 HIS n 1 205 SER n 1 206 CYS n 1 207 ASP n 1 208 PRO n 1 209 ASN n 1 210 CYS n 1 211 SER n 1 212 ILE n 1 213 VAL n 1 214 PHE n 1 215 ASN n 1 216 GLY n 1 217 PRO n 1 218 HIS n 1 219 LEU n 1 220 LEU n 1 221 LEU n 1 222 ARG n 1 223 ALA n 1 224 VAL n 1 225 ARG n 1 226 ASP n 1 227 ILE n 1 228 GLU n 1 229 VAL n 1 230 GLY n 1 231 GLU n 1 232 GLU n 1 233 LEU n 1 234 THR n 1 235 ILE n 1 236 CYS n 1 237 TYR n 1 238 LEU n 1 239 ASP n 1 240 MET n 1 241 LEU n 1 242 MET n 1 243 THR n 1 244 SER n 1 245 GLU n 1 246 GLU n 1 247 ARG n 1 248 ARG n 1 249 LYS n 1 250 GLN n 1 251 LEU n 1 252 ARG n 1 253 ASP n 1 254 GLN n 1 255 TYR n 1 256 CYS n 1 257 PHE n 1 258 GLU n 1 259 CYS n 1 260 ASP n 1 261 CYS n 1 262 PHE n 1 263 ARG n 1 264 CYS n 1 265 GLN n 1 266 THR n 1 267 GLN n 1 268 ASP n 1 269 LYS n 1 270 ASP n 1 271 ALA n 1 272 ASP n 1 273 MET n 1 274 LEU n 1 275 THR n 1 276 GLY n 1 277 ASP n 1 278 GLU n 1 279 GLN n 1 280 VAL n 1 281 TRP n 1 282 LYS n 1 283 GLU n 1 284 VAL n 1 285 GLN n 1 286 GLU n 1 287 SER n 1 288 LEU n 1 289 LYS n 1 290 LYS n 1 291 ILE n 1 292 GLU n 1 293 GLU n 1 294 LEU n 1 295 LYS n 1 296 ALA n 1 297 HIS n 1 298 TRP n 1 299 LYS n 1 300 TRP n 1 301 GLU n 1 302 GLN n 1 303 VAL n 1 304 LEU n 1 305 ALA n 1 306 MET n 1 307 CYS n 1 308 GLN n 1 309 ALA n 1 310 ILE n 1 311 ILE n 1 312 SER n 1 313 SER n 1 314 ASN n 1 315 SER n 1 316 GLU n 1 317 ARG n 1 318 LEU n 1 319 PRO n 1 320 ASP n 1 321 ILE n 1 322 ASN n 1 323 ILE n 1 324 TYR n 1 325 GLN n 1 326 LEU n 1 327 LYS n 1 328 VAL n 1 329 LEU n 1 330 ASP n 1 331 CYS n 1 332 ALA n 1 333 MET n 1 334 ASP n 1 335 ALA n 1 336 CYS n 1 337 ILE n 1 338 ASN n 1 339 LEU n 1 340 GLY n 1 341 LEU n 1 342 LEU n 1 343 GLU n 1 344 GLU n 1 345 ALA n 1 346 LEU n 1 347 PHE n 1 348 TYR n 1 349 GLY n 1 350 THR n 1 351 ARG n 1 352 THR n 1 353 MET n 1 354 GLU n 1 355 PRO n 1 356 TYR n 1 357 ARG n 1 358 ILE n 1 359 PHE n 1 360 PHE n 1 361 PRO n 1 362 GLY n 1 363 SER n 1 364 HIS n 1 365 PRO n 1 366 VAL n 1 367 ARG n 1 368 GLY n 1 369 VAL n 1 370 GLN n 1 371 VAL n 1 372 MET n 1 373 LYS n 1 374 VAL n 1 375 GLY n 1 376 LYS n 1 377 LEU n 1 378 GLN n 1 379 LEU n 1 380 HIS n 1 381 GLN n 1 382 GLY n 1 383 MET n 1 384 PHE n 1 385 PRO n 1 386 GLN n 1 387 ALA n 1 388 MET n 1 389 LYS n 1 390 ASN n 1 391 LEU n 1 392 ARG n 1 393 LEU n 1 394 ALA n 1 395 PHE n 1 396 ASP n 1 397 ILE n 1 398 MET n 1 399 ARG n 1 400 VAL n 1 401 THR n 1 402 HIS n 1 403 GLY n 1 404 ARG n 1 405 GLU n 1 406 HIS n 1 407 SER n 1 408 LEU n 1 409 ILE n 1 410 GLU n 1 411 ASP n 1 412 LEU n 1 413 ILE n 1 414 LEU n 1 415 LEU n 1 416 LEU n 1 417 GLU n 1 418 GLU n 1 419 CYS n 1 420 ASP n 1 421 ALA n 1 422 ASN n 1 423 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 423 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SMYD3, ZMYND1, ZNFN3A1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SMYD3_HUMAN _struct_ref.pdbx_db_accession Q9H7B4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PLKVEKFATAKRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPD HKRECKCLKSCKPRYPPDSVRLLGRVVFKLMDGAPSESEKLYSFYDLESNINKLTEDKKEGLRQLVMTFQHFMREEIQDA SQLPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDM LMTSEERRKQLRDQYCFECDCFRCQTQDKDADMLTGDEQVWKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPD INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV THGREHSLIEDLILLLEECDANI ; _struct_ref.pdbx_align_begin 3 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5YJO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 423 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9H7B4 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 425 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 425 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5YJO ASN A 11 ? UNP Q9H7B4 LYS 13 'engineered mutation' 13 1 1 5YJO ARG A 138 ? UNP Q9H7B4 LYS 140 'engineered mutation' 140 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8W0 non-polymer . 'propyl (3~{S})-4-[[(6~{R})-6-(aminomethyl)-5,6,7,8-tetrahydroacridin-3-yl]carbonyl]-3-methyl-piperazine-1-carboxylate' ? 'C24 H32 N4 O3' 424.536 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YJO _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M Magnesium acetate, 17% PEG3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR CCD 130 mm' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-02-06 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5419 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5419 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 21.850 _reflns.entry_id 5YJO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.1350 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 24856 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.300 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.800 _reflns.pdbx_Rmerge_I_obs 0.165 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.800 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.337 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.140 2.180 ? ? ? ? ? ? 1203 97.900 ? ? ? ? 0.310 ? ? ? ? ? ? ? ? 4.400 ? 1.413 ? ? ? ? ? 1 1 ? ? 2.180 2.220 ? ? ? ? ? ? 1225 98.400 ? ? ? ? 0.301 ? ? ? ? ? ? ? ? 4.800 ? 1.454 ? ? ? ? ? 2 1 ? ? 2.220 2.260 ? ? ? ? ? ? 1212 98.700 ? ? ? ? 0.270 ? ? ? ? ? ? ? ? 4.800 ? 1.459 ? ? ? ? ? 3 1 ? ? 2.260 2.310 ? ? ? ? ? ? 1207 98.800 ? ? ? ? 0.267 ? ? ? ? ? ? ? ? 4.800 ? 1.468 ? ? ? ? ? 4 1 ? ? 2.310 2.360 ? ? ? ? ? ? 1205 98.900 ? ? ? ? 0.254 ? ? ? ? ? ? ? ? 4.800 ? 1.489 ? ? ? ? ? 5 1 ? ? 2.360 2.410 ? ? ? ? ? ? 1216 99.100 ? ? ? ? 0.229 ? ? ? ? ? ? ? ? 4.800 ? 1.417 ? ? ? ? ? 6 1 ? ? 2.410 2.470 ? ? ? ? ? ? 1239 99.400 ? ? ? ? 0.221 ? ? ? ? ? ? ? ? 4.800 ? 1.375 ? ? ? ? ? 7 1 ? ? 2.470 2.540 ? ? ? ? ? ? 1217 99.300 ? ? ? ? 0.223 ? ? ? ? ? ? ? ? 4.800 ? 1.441 ? ? ? ? ? 8 1 ? ? 2.540 2.610 ? ? ? ? ? ? 1214 99.400 ? ? ? ? 0.208 ? ? ? ? ? ? ? ? 4.800 ? 1.403 ? ? ? ? ? 9 1 ? ? 2.610 2.700 ? ? ? ? ? ? 1250 99.300 ? ? ? ? 0.208 ? ? ? ? ? ? ? ? 4.800 ? 1.404 ? ? ? ? ? 10 1 ? ? 2.700 2.790 ? ? ? ? ? ? 1237 99.700 ? ? ? ? 0.192 ? ? ? ? ? ? ? ? 4.800 ? 1.384 ? ? ? ? ? 11 1 ? ? 2.790 2.900 ? ? ? ? ? ? 1223 99.800 ? ? ? ? 0.188 ? ? ? ? ? ? ? ? 4.800 ? 1.413 ? ? ? ? ? 12 1 ? ? 2.900 3.040 ? ? ? ? ? ? 1257 99.700 ? ? ? ? 0.174 ? ? ? ? ? ? ? ? 4.800 ? 1.325 ? ? ? ? ? 13 1 ? ? 3.040 3.200 ? ? ? ? ? ? 1243 99.800 ? ? ? ? 0.172 ? ? ? ? ? ? ? ? 4.800 ? 1.311 ? ? ? ? ? 14 1 ? ? 3.200 3.400 ? ? ? ? ? ? 1256 99.900 ? ? ? ? 0.159 ? ? ? ? ? ? ? ? 4.800 ? 1.211 ? ? ? ? ? 15 1 ? ? 3.400 3.660 ? ? ? ? ? ? 1257 100.000 ? ? ? ? 0.147 ? ? ? ? ? ? ? ? 4.800 ? 1.161 ? ? ? ? ? 16 1 ? ? 3.660 4.030 ? ? ? ? ? ? 1257 99.600 ? ? ? ? 0.145 ? ? ? ? ? ? ? ? 4.700 ? 1.154 ? ? ? ? ? 17 1 ? ? 4.030 4.610 ? ? ? ? ? ? 1272 99.900 ? ? ? ? 0.146 ? ? ? ? ? ? ? ? 4.600 ? 1.118 ? ? ? ? ? 18 1 ? ? 4.610 5.810 ? ? ? ? ? ? 1299 99.800 ? ? ? ? 0.148 ? ? ? ? ? ? ? ? 4.700 ? 1.043 ? ? ? ? ? 19 1 ? ? 5.810 50.000 ? ? ? ? ? ? 1367 98.200 ? ? ? ? 0.121 ? ? ? ? ? ? ? ? 4.400 ? 1.328 ? ? ? ? ? 20 1 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 63.670 _refine.B_iso_mean 24.2532 _refine.B_iso_min 12.410 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5YJO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1350 _refine.ls_d_res_low 31.6300 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24817 _refine.ls_number_reflns_R_free 2027 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.1400 _refine.ls_percent_reflns_R_free 8.1700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1935 _refine.ls_R_factor_R_free 0.2317 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1901 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.3000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.1350 _refine_hist.d_res_low 31.6300 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 3558 _refine_hist.pdbx_number_residues_total 423 _refine_hist.pdbx_B_iso_mean_ligand 21.54 _refine_hist.pdbx_B_iso_mean_solvent 22.60 _refine_hist.pdbx_number_atoms_protein 3339 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 3467 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.525 ? 4681 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.038 ? 516 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 601 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 6.279 ? 2154 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1354 2.1888 1674 . 137 1537 95.0000 . . . 0.2647 0.0000 0.2161 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.1888 2.2479 1723 . 155 1568 99.0000 . . . 0.2597 0.0000 0.2084 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.2479 2.3141 1731 . 133 1598 99.0000 . . . 0.2734 0.0000 0.2020 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.3141 2.3887 1760 . 138 1622 99.0000 . . . 0.2409 0.0000 0.2034 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.3887 2.4741 1745 . 148 1597 99.0000 . . . 0.2510 0.0000 0.2086 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.4741 2.5731 1759 . 136 1623 99.0000 . . . 0.2801 0.0000 0.2129 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.5731 2.6901 1756 . 142 1614 100.0000 . . . 0.2771 0.0000 0.2162 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.6901 2.8319 1768 . 142 1626 100.0000 . . . 0.2849 0.0000 0.2066 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.8319 3.0092 1778 . 147 1631 100.0000 . . . 0.2588 0.0000 0.2231 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.0092 3.2413 1786 . 150 1636 100.0000 . . . 0.2467 0.0000 0.2131 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.2413 3.5671 1783 . 140 1643 100.0000 . . . 0.2247 0.0000 0.1921 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.5671 4.0823 1809 . 153 1656 100.0000 . . . 0.2244 0.0000 0.1650 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 4.0823 5.1398 1837 . 149 1688 100.0000 . . . 0.1823 0.0000 0.1498 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 5.1398 31.6333 1908 . 157 1751 99.0000 . . . 0.1674 0.0000 0.1659 . . . . . . 14 . . . # _struct.entry_id 5YJO _struct.title 'Crystal structure of SmyD3 in complex with covalent inhibitor 4' _struct.pdbx_descriptor 'Smyd3 methyltransferase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YJO _struct_keywords.text 'covalent inhibitor, methyltransferase, methyltransferase inhibitor, TRANSFERASE-INHIBITOR complex' _struct_keywords.pdbx_keywords TRANSFERASE/INHIBITOR # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 40 ? ARG A 43 ? LYS A 42 ARG A 45 5 ? 4 HELX_P HELX_P2 AA2 SER A 70 ? ALA A 77 ? SER A 72 ALA A 79 1 ? 8 HELX_P HELX_P3 AA3 ALA A 77 ? CYS A 91 ? ALA A 79 CYS A 93 1 ? 15 HELX_P HELX_P4 AA4 PRO A 97 ? GLY A 113 ? PRO A 99 GLY A 115 1 ? 17 HELX_P HELX_P5 AA5 SER A 116 ? LYS A 120 ? SER A 118 LYS A 122 5 ? 5 HELX_P HELX_P6 AA6 ASN A 130 ? LEU A 134 ? ASN A 132 LEU A 136 5 ? 5 HELX_P HELX_P7 AA7 THR A 135 ? MET A 153 ? THR A 137 MET A 155 1 ? 19 HELX_P HELX_P8 AA8 ASP A 159 ? LEU A 163 ? ASP A 161 LEU A 165 5 ? 5 HELX_P HELX_P9 AA9 ASP A 168 ? CYS A 178 ? ASP A 170 CYS A 180 1 ? 11 HELX_P HELX_P10 AB1 SER A 198 ? LEU A 202 ? SER A 200 LEU A 204 5 ? 5 HELX_P HELX_P11 AB2 THR A 243 ? GLN A 254 ? THR A 245 GLN A 256 1 ? 12 HELX_P HELX_P12 AB3 CYS A 261 ? GLN A 267 ? CYS A 263 GLN A 269 1 ? 7 HELX_P HELX_P13 AB4 LYS A 269 ? LEU A 274 ? LYS A 271 LEU A 276 1 ? 6 HELX_P HELX_P14 AB5 ASP A 277 ? HIS A 297 ? ASP A 279 HIS A 299 1 ? 21 HELX_P HELX_P15 AB6 LYS A 299 ? SER A 312 ? LYS A 301 SER A 314 1 ? 14 HELX_P HELX_P16 AB7 ASN A 322 ? GLY A 340 ? ASN A 324 GLY A 342 1 ? 19 HELX_P HELX_P17 AB8 LEU A 341 ? THR A 352 ? LEU A 343 THR A 354 1 ? 12 HELX_P HELX_P18 AB9 THR A 352 ? PHE A 360 ? THR A 354 PHE A 362 1 ? 9 HELX_P HELX_P19 AC1 HIS A 364 ? GLY A 382 ? HIS A 366 GLY A 384 1 ? 19 HELX_P HELX_P20 AC2 MET A 383 ? HIS A 402 ? MET A 385 HIS A 404 1 ? 20 HELX_P HELX_P21 AC3 HIS A 406 ? ILE A 423 ? HIS A 408 ILE A 425 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 47 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 49 A ZN 502 1_555 ? ? ? ? ? ? ? 2.358 ? metalc2 metalc ? ? A CYS 50 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 52 A ZN 502 1_555 ? ? ? ? ? ? ? 2.333 ? metalc3 metalc ? ? A CYS 60 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 62 A ZN 501 1_555 ? ? ? ? ? ? ? 2.349 ? metalc4 metalc ? ? A CYS 63 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 65 A ZN 501 1_555 ? ? ? ? ? ? ? 2.312 ? metalc5 metalc ? ? A CYS 69 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 71 A ZN 502 1_555 ? ? ? ? ? ? ? 2.353 ? metalc6 metalc ? ? A CYS 73 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 75 A ZN 502 1_555 ? ? ? ? ? ? ? 2.287 ? metalc7 metalc ? ? A HIS 81 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 83 A ZN 501 1_555 ? ? ? ? ? ? ? 2.050 ? metalc8 metalc ? ? A CYS 85 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 87 A ZN 501 1_555 ? ? ? ? ? ? ? 2.274 ? metalc9 metalc ? ? A CYS 206 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 208 A ZN 503 1_555 ? ? ? ? ? ? ? 2.306 ? metalc10 metalc ? ? A CYS 259 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 261 A ZN 503 1_555 ? ? ? ? ? ? ? 2.272 ? metalc11 metalc ? ? A CYS 261 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 263 A ZN 503 1_555 ? ? ? ? ? ? ? 2.315 ? metalc12 metalc ? ? A CYS 264 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 266 A ZN 503 1_555 ? ? ? ? ? ? ? 2.334 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 92 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 94 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 93 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 95 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? AA3 ? 3 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 4 ? ALA A 8 ? VAL A 6 ALA A 10 AA1 2 ASN A 14 ? ALA A 18 ? ASN A 16 ALA A 20 AA1 3 GLU A 232 ? ILE A 235 ? GLU A 234 ILE A 237 AA1 4 ASN A 203 ? HIS A 204 ? ASN A 205 HIS A 206 AA2 1 LEU A 27 ? SER A 31 ? LEU A 29 SER A 33 AA2 2 HIS A 218 ? ALA A 223 ? HIS A 220 ALA A 225 AA2 3 CYS A 210 ? ASN A 215 ? CYS A 212 ASN A 217 AA3 1 ALA A 35 ? VAL A 38 ? ALA A 37 VAL A 40 AA3 2 GLU A 190 ? LEU A 195 ? GLU A 192 LEU A 197 AA3 3 SER A 180 ? CYS A 184 ? SER A 182 CYS A 186 AA4 1 MET A 58 ? ARG A 59 ? MET A 60 ARG A 61 AA4 2 LYS A 67 ? TYR A 68 ? LYS A 69 TYR A 70 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 7 ? N PHE A 9 O GLY A 15 ? O GLY A 17 AA1 2 3 N LEU A 16 ? N LEU A 18 O LEU A 233 ? O LEU A 235 AA1 3 4 O ILE A 235 ? O ILE A 237 N ASN A 203 ? N ASN A 205 AA2 1 2 N LEU A 28 ? N LEU A 30 O LEU A 221 ? O LEU A 223 AA2 2 3 O ARG A 222 ? O ARG A 224 N SER A 211 ? N SER A 213 AA3 1 2 N ALA A 35 ? N ALA A 37 O LEU A 195 ? O LEU A 197 AA3 2 3 O VAL A 191 ? O VAL A 193 N ILE A 183 ? N ILE A 185 AA4 1 2 N MET A 58 ? N MET A 60 O TYR A 68 ? O TYR A 70 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'binding site for residue ZN A 501' AC2 Software A ZN 502 ? 4 'binding site for residue ZN A 502' AC3 Software A ZN 503 ? 4 'binding site for residue ZN A 503' AC4 Software A 8W0 504 ? 17 'binding site for residue 8W0 A 504' AC5 Software A SAM 505 ? 23 'binding site for residue SAM A 505' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 60 ? CYS A 62 . ? 1_555 ? 2 AC1 4 CYS A 63 ? CYS A 65 . ? 1_555 ? 3 AC1 4 HIS A 81 ? HIS A 83 . ? 1_555 ? 4 AC1 4 CYS A 85 ? CYS A 87 . ? 1_555 ? 5 AC2 4 CYS A 47 ? CYS A 49 . ? 1_555 ? 6 AC2 4 CYS A 50 ? CYS A 52 . ? 1_555 ? 7 AC2 4 CYS A 69 ? CYS A 71 . ? 1_555 ? 8 AC2 4 CYS A 73 ? CYS A 75 . ? 1_555 ? 9 AC3 4 CYS A 206 ? CYS A 208 . ? 1_555 ? 10 AC3 4 CYS A 259 ? CYS A 261 . ? 1_555 ? 11 AC3 4 CYS A 261 ? CYS A 263 . ? 1_555 ? 12 AC3 4 CYS A 264 ? CYS A 266 . ? 1_555 ? 13 AC4 17 ASN A 179 ? ASN A 181 . ? 1_555 ? 14 AC4 17 SER A 180 ? SER A 182 . ? 1_555 ? 15 AC4 17 PHE A 181 ? PHE A 183 . ? 1_555 ? 16 AC4 17 THR A 182 ? THR A 184 . ? 1_555 ? 17 AC4 17 CYS A 184 ? CYS A 186 . ? 1_555 ? 18 AC4 17 MET A 188 ? MET A 190 . ? 1_555 ? 19 AC4 17 ILE A 212 ? ILE A 214 . ? 1_555 ? 20 AC4 17 PHE A 214 ? PHE A 216 . ? 1_555 ? 21 AC4 17 CYS A 236 ? CYS A 238 . ? 1_555 ? 22 AC4 17 TYR A 237 ? TYR A 239 . ? 1_555 ? 23 AC4 17 ASP A 239 ? ASP A 241 . ? 1_555 ? 24 AC4 17 TYR A 255 ? TYR A 257 . ? 1_555 ? 25 AC4 17 SAM F . ? SAM A 505 . ? 1_555 ? 26 AC4 17 HOH G . ? HOH A 603 . ? 1_555 ? 27 AC4 17 HOH G . ? HOH A 672 . ? 1_555 ? 28 AC4 17 HOH G . ? HOH A 694 . ? 1_555 ? 29 AC4 17 HOH G . ? HOH A 721 . ? 1_555 ? 30 AC5 23 ARG A 12 ? ARG A 14 . ? 1_555 ? 31 AC5 23 ASN A 14 ? ASN A 16 . ? 1_555 ? 32 AC5 23 TYR A 122 ? TYR A 124 . ? 1_555 ? 33 AC5 23 GLU A 128 ? GLU A 130 . ? 1_555 ? 34 AC5 23 ASN A 130 ? ASN A 132 . ? 1_555 ? 35 AC5 23 CYS A 178 ? CYS A 180 . ? 1_555 ? 36 AC5 23 ASN A 179 ? ASN A 181 . ? 1_555 ? 37 AC5 23 SER A 200 ? SER A 202 . ? 1_555 ? 38 AC5 23 LEU A 201 ? LEU A 203 . ? 1_555 ? 39 AC5 23 LEU A 202 ? LEU A 204 . ? 1_555 ? 40 AC5 23 ASN A 203 ? ASN A 205 . ? 1_555 ? 41 AC5 23 HIS A 204 ? HIS A 206 . ? 1_555 ? 42 AC5 23 TYR A 237 ? TYR A 239 . ? 1_555 ? 43 AC5 23 TYR A 255 ? TYR A 257 . ? 1_555 ? 44 AC5 23 PHE A 257 ? PHE A 259 . ? 1_555 ? 45 AC5 23 8W0 E . ? 8W0 A 504 . ? 1_555 ? 46 AC5 23 HOH G . ? HOH A 604 . ? 1_555 ? 47 AC5 23 HOH G . ? HOH A 638 . ? 1_555 ? 48 AC5 23 HOH G . ? HOH A 653 . ? 1_555 ? 49 AC5 23 HOH G . ? HOH A 698 . ? 1_555 ? 50 AC5 23 HOH G . ? HOH A 711 . ? 1_555 ? 51 AC5 23 HOH G . ? HOH A 715 . ? 1_555 ? 52 AC5 23 HOH G . ? HOH A 723 . ? 1_555 ? # _atom_sites.entry_id 5YJO _atom_sites.fract_transf_matrix[1][1] 0.016279 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015110 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009290 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 3 3 PRO PRO A . n A 1 2 LEU 2 4 4 LEU LEU A . n A 1 3 LYS 3 5 5 LYS LYS A . n A 1 4 VAL 4 6 6 VAL VAL A . n A 1 5 GLU 5 7 7 GLU GLU A . n A 1 6 LYS 6 8 8 LYS LYS A . n A 1 7 PHE 7 9 9 PHE PHE A . n A 1 8 ALA 8 10 10 ALA ALA A . n A 1 9 THR 9 11 11 THR THR A . n A 1 10 ALA 10 12 12 ALA ALA A . n A 1 11 ASN 11 13 13 ASN ASN A . n A 1 12 ARG 12 14 14 ARG ARG A . n A 1 13 GLY 13 15 15 GLY GLY A . n A 1 14 ASN 14 16 16 ASN ASN A . n A 1 15 GLY 15 17 17 GLY GLY A . n A 1 16 LEU 16 18 18 LEU LEU A . n A 1 17 ARG 17 19 19 ARG ARG A . n A 1 18 ALA 18 20 20 ALA ALA A . n A 1 19 VAL 19 21 21 VAL VAL A . n A 1 20 THR 20 22 22 THR THR A . n A 1 21 PRO 21 23 23 PRO PRO A . n A 1 22 LEU 22 24 24 LEU LEU A . n A 1 23 ARG 23 25 25 ARG ARG A . n A 1 24 PRO 24 26 26 PRO PRO A . n A 1 25 GLY 25 27 27 GLY GLY A . n A 1 26 GLU 26 28 28 GLU GLU A . n A 1 27 LEU 27 29 29 LEU LEU A . n A 1 28 LEU 28 30 30 LEU LEU A . n A 1 29 PHE 29 31 31 PHE PHE A . n A 1 30 ARG 30 32 32 ARG ARG A . n A 1 31 SER 31 33 33 SER SER A . n A 1 32 ASP 32 34 34 ASP ASP A . n A 1 33 PRO 33 35 35 PRO PRO A . n A 1 34 LEU 34 36 36 LEU LEU A . n A 1 35 ALA 35 37 37 ALA ALA A . n A 1 36 TYR 36 38 38 TYR TYR A . n A 1 37 THR 37 39 39 THR THR A . n A 1 38 VAL 38 40 40 VAL VAL A . n A 1 39 CYS 39 41 41 CYS CYS A . n A 1 40 LYS 40 42 42 LYS LYS A . n A 1 41 GLY 41 43 43 GLY GLY A . n A 1 42 SER 42 44 44 SER SER A . n A 1 43 ARG 43 45 45 ARG ARG A . n A 1 44 GLY 44 46 46 GLY GLY A . n A 1 45 VAL 45 47 47 VAL VAL A . n A 1 46 VAL 46 48 48 VAL VAL A . n A 1 47 CYS 47 49 49 CYS CYS A . n A 1 48 ASP 48 50 50 ASP ASP A . n A 1 49 ARG 49 51 51 ARG ARG A . n A 1 50 CYS 50 52 52 CYS CYS A . n A 1 51 LEU 51 53 53 LEU LEU A . n A 1 52 LEU 52 54 54 LEU LEU A . n A 1 53 GLY 53 55 55 GLY GLY A . n A 1 54 LYS 54 56 56 LYS LYS A . n A 1 55 GLU 55 57 57 GLU GLU A . n A 1 56 LYS 56 58 58 LYS LYS A . n A 1 57 LEU 57 59 59 LEU LEU A . n A 1 58 MET 58 60 60 MET MET A . n A 1 59 ARG 59 61 61 ARG ARG A . n A 1 60 CYS 60 62 62 CYS CYS A . n A 1 61 SER 61 63 63 SER SER A . n A 1 62 GLN 62 64 64 GLN GLN A . n A 1 63 CYS 63 65 65 CYS CYS A . n A 1 64 ARG 64 66 66 ARG ARG A . n A 1 65 VAL 65 67 67 VAL VAL A . n A 1 66 ALA 66 68 68 ALA ALA A . n A 1 67 LYS 67 69 69 LYS LYS A . n A 1 68 TYR 68 70 70 TYR TYR A . n A 1 69 CYS 69 71 71 CYS CYS A . n A 1 70 SER 70 72 72 SER SER A . n A 1 71 ALA 71 73 73 ALA ALA A . n A 1 72 LYS 72 74 74 LYS LYS A . n A 1 73 CYS 73 75 75 CYS CYS A . n A 1 74 GLN 74 76 76 GLN GLN A . n A 1 75 LYS 75 77 77 LYS LYS A . n A 1 76 LYS 76 78 78 LYS LYS A . n A 1 77 ALA 77 79 79 ALA ALA A . n A 1 78 TRP 78 80 80 TRP TRP A . n A 1 79 PRO 79 81 81 PRO PRO A . n A 1 80 ASP 80 82 82 ASP ASP A . n A 1 81 HIS 81 83 83 HIS HIS A . n A 1 82 LYS 82 84 84 LYS LYS A . n A 1 83 ARG 83 85 85 ARG ARG A . n A 1 84 GLU 84 86 86 GLU GLU A . n A 1 85 CYS 85 87 87 CYS CYS A . n A 1 86 LYS 86 88 88 LYS LYS A . n A 1 87 CYS 87 89 89 CYS CYS A . n A 1 88 LEU 88 90 90 LEU LEU A . n A 1 89 LYS 89 91 91 LYS LYS A . n A 1 90 SER 90 92 92 SER SER A . n A 1 91 CYS 91 93 93 CYS CYS A . n A 1 92 LYS 92 94 94 LYS LYS A . n A 1 93 PRO 93 95 95 PRO PRO A . n A 1 94 ARG 94 96 96 ARG ARG A . n A 1 95 TYR 95 97 97 TYR TYR A . n A 1 96 PRO 96 98 98 PRO PRO A . n A 1 97 PRO 97 99 99 PRO PRO A . n A 1 98 ASP 98 100 100 ASP ASP A . n A 1 99 SER 99 101 101 SER SER A . n A 1 100 VAL 100 102 102 VAL VAL A . n A 1 101 ARG 101 103 103 ARG ARG A . n A 1 102 LEU 102 104 104 LEU LEU A . n A 1 103 LEU 103 105 105 LEU LEU A . n A 1 104 GLY 104 106 106 GLY GLY A . n A 1 105 ARG 105 107 107 ARG ARG A . n A 1 106 VAL 106 108 108 VAL VAL A . n A 1 107 VAL 107 109 109 VAL VAL A . n A 1 108 PHE 108 110 110 PHE PHE A . n A 1 109 LYS 109 111 111 LYS LYS A . n A 1 110 LEU 110 112 112 LEU LEU A . n A 1 111 MET 111 113 113 MET MET A . n A 1 112 ASP 112 114 114 ASP ASP A . n A 1 113 GLY 113 115 115 GLY GLY A . n A 1 114 ALA 114 116 116 ALA ALA A . n A 1 115 PRO 115 117 117 PRO PRO A . n A 1 116 SER 116 118 118 SER SER A . n A 1 117 GLU 117 119 119 GLU GLU A . n A 1 118 SER 118 120 120 SER SER A . n A 1 119 GLU 119 121 121 GLU GLU A . n A 1 120 LYS 120 122 122 LYS LYS A . n A 1 121 LEU 121 123 123 LEU LEU A . n A 1 122 TYR 122 124 124 TYR TYR A . n A 1 123 SER 123 125 125 SER SER A . n A 1 124 PHE 124 126 126 PHE PHE A . n A 1 125 TYR 125 127 127 TYR TYR A . n A 1 126 ASP 126 128 128 ASP ASP A . n A 1 127 LEU 127 129 129 LEU LEU A . n A 1 128 GLU 128 130 130 GLU GLU A . n A 1 129 SER 129 131 131 SER SER A . n A 1 130 ASN 130 132 132 ASN ASN A . n A 1 131 ILE 131 133 133 ILE ILE A . n A 1 132 ASN 132 134 134 ASN ASN A . n A 1 133 LYS 133 135 135 LYS LYS A . n A 1 134 LEU 134 136 136 LEU LEU A . n A 1 135 THR 135 137 137 THR THR A . n A 1 136 GLU 136 138 138 GLU GLU A . n A 1 137 ASP 137 139 139 ASP ASP A . n A 1 138 ARG 138 140 140 ARG ARG A . n A 1 139 LYS 139 141 141 LYS LYS A . n A 1 140 GLU 140 142 142 GLU GLU A . n A 1 141 GLY 141 143 143 GLY GLY A . n A 1 142 LEU 142 144 144 LEU LEU A . n A 1 143 ARG 143 145 145 ARG ARG A . n A 1 144 GLN 144 146 146 GLN GLN A . n A 1 145 LEU 145 147 147 LEU LEU A . n A 1 146 VAL 146 148 148 VAL VAL A . n A 1 147 MET 147 149 149 MET MET A . n A 1 148 THR 148 150 150 THR THR A . n A 1 149 PHE 149 151 151 PHE PHE A . n A 1 150 GLN 150 152 152 GLN GLN A . n A 1 151 HIS 151 153 153 HIS HIS A . n A 1 152 PHE 152 154 154 PHE PHE A . n A 1 153 MET 153 155 155 MET MET A . n A 1 154 ARG 154 156 156 ARG ARG A . n A 1 155 GLU 155 157 157 GLU GLU A . n A 1 156 GLU 156 158 158 GLU GLU A . n A 1 157 ILE 157 159 159 ILE ILE A . n A 1 158 GLN 158 160 160 GLN GLN A . n A 1 159 ASP 159 161 161 ASP ASP A . n A 1 160 ALA 160 162 162 ALA ALA A . n A 1 161 SER 161 163 163 SER SER A . n A 1 162 GLN 162 164 164 GLN GLN A . n A 1 163 LEU 163 165 165 LEU LEU A . n A 1 164 PRO 164 166 166 PRO PRO A . n A 1 165 PRO 165 167 167 PRO PRO A . n A 1 166 ALA 166 168 168 ALA ALA A . n A 1 167 PHE 167 169 169 PHE PHE A . n A 1 168 ASP 168 170 170 ASP ASP A . n A 1 169 LEU 169 171 171 LEU LEU A . n A 1 170 PHE 170 172 172 PHE PHE A . n A 1 171 GLU 171 173 173 GLU GLU A . n A 1 172 ALA 172 174 174 ALA ALA A . n A 1 173 PHE 173 175 175 PHE PHE A . n A 1 174 ALA 174 176 176 ALA ALA A . n A 1 175 LYS 175 177 177 LYS LYS A . n A 1 176 VAL 176 178 178 VAL VAL A . n A 1 177 ILE 177 179 179 ILE ILE A . n A 1 178 CYS 178 180 180 CYS CYS A . n A 1 179 ASN 179 181 181 ASN ASN A . n A 1 180 SER 180 182 182 SER SER A . n A 1 181 PHE 181 183 183 PHE PHE A . n A 1 182 THR 182 184 184 THR THR A . n A 1 183 ILE 183 185 185 ILE ILE A . n A 1 184 CYS 184 186 186 CYS CYS A . n A 1 185 ASN 185 187 187 ASN ASN A . n A 1 186 ALA 186 188 188 ALA ALA A . n A 1 187 GLU 187 189 189 GLU GLU A . n A 1 188 MET 188 190 190 MET MET A . n A 1 189 GLN 189 191 191 GLN GLN A . n A 1 190 GLU 190 192 192 GLU GLU A . n A 1 191 VAL 191 193 193 VAL VAL A . n A 1 192 GLY 192 194 194 GLY GLY A . n A 1 193 VAL 193 195 195 VAL VAL A . n A 1 194 GLY 194 196 196 GLY GLY A . n A 1 195 LEU 195 197 197 LEU LEU A . n A 1 196 TYR 196 198 198 TYR TYR A . n A 1 197 PRO 197 199 199 PRO PRO A . n A 1 198 SER 198 200 200 SER SER A . n A 1 199 ILE 199 201 201 ILE ILE A . n A 1 200 SER 200 202 202 SER SER A . n A 1 201 LEU 201 203 203 LEU LEU A . n A 1 202 LEU 202 204 204 LEU LEU A . n A 1 203 ASN 203 205 205 ASN ASN A . n A 1 204 HIS 204 206 206 HIS HIS A . n A 1 205 SER 205 207 207 SER SER A . n A 1 206 CYS 206 208 208 CYS CYS A . n A 1 207 ASP 207 209 209 ASP ASP A . n A 1 208 PRO 208 210 210 PRO PRO A . n A 1 209 ASN 209 211 211 ASN ASN A . n A 1 210 CYS 210 212 212 CYS CYS A . n A 1 211 SER 211 213 213 SER SER A . n A 1 212 ILE 212 214 214 ILE ILE A . n A 1 213 VAL 213 215 215 VAL VAL A . n A 1 214 PHE 214 216 216 PHE PHE A . n A 1 215 ASN 215 217 217 ASN ASN A . n A 1 216 GLY 216 218 218 GLY GLY A . n A 1 217 PRO 217 219 219 PRO PRO A . n A 1 218 HIS 218 220 220 HIS HIS A . n A 1 219 LEU 219 221 221 LEU LEU A . n A 1 220 LEU 220 222 222 LEU LEU A . n A 1 221 LEU 221 223 223 LEU LEU A . n A 1 222 ARG 222 224 224 ARG ARG A . n A 1 223 ALA 223 225 225 ALA ALA A . n A 1 224 VAL 224 226 226 VAL VAL A . n A 1 225 ARG 225 227 227 ARG ARG A . n A 1 226 ASP 226 228 228 ASP ASP A . n A 1 227 ILE 227 229 229 ILE ILE A . n A 1 228 GLU 228 230 230 GLU GLU A . n A 1 229 VAL 229 231 231 VAL VAL A . n A 1 230 GLY 230 232 232 GLY GLY A . n A 1 231 GLU 231 233 233 GLU GLU A . n A 1 232 GLU 232 234 234 GLU GLU A . n A 1 233 LEU 233 235 235 LEU LEU A . n A 1 234 THR 234 236 236 THR THR A . n A 1 235 ILE 235 237 237 ILE ILE A . n A 1 236 CYS 236 238 238 CYS CYS A . n A 1 237 TYR 237 239 239 TYR TYR A . n A 1 238 LEU 238 240 240 LEU LEU A . n A 1 239 ASP 239 241 241 ASP ASP A . n A 1 240 MET 240 242 242 MET MET A . n A 1 241 LEU 241 243 243 LEU LEU A . n A 1 242 MET 242 244 244 MET MET A . n A 1 243 THR 243 245 245 THR THR A . n A 1 244 SER 244 246 246 SER SER A . n A 1 245 GLU 245 247 247 GLU GLU A . n A 1 246 GLU 246 248 248 GLU GLU A . n A 1 247 ARG 247 249 249 ARG ARG A . n A 1 248 ARG 248 250 250 ARG ARG A . n A 1 249 LYS 249 251 251 LYS LYS A . n A 1 250 GLN 250 252 252 GLN GLN A . n A 1 251 LEU 251 253 253 LEU LEU A . n A 1 252 ARG 252 254 254 ARG ARG A . n A 1 253 ASP 253 255 255 ASP ASP A . n A 1 254 GLN 254 256 256 GLN GLN A . n A 1 255 TYR 255 257 257 TYR TYR A . n A 1 256 CYS 256 258 258 CYS CYS A . n A 1 257 PHE 257 259 259 PHE PHE A . n A 1 258 GLU 258 260 260 GLU GLU A . n A 1 259 CYS 259 261 261 CYS CYS A . n A 1 260 ASP 260 262 262 ASP ASP A . n A 1 261 CYS 261 263 263 CYS CYS A . n A 1 262 PHE 262 264 264 PHE PHE A . n A 1 263 ARG 263 265 265 ARG ARG A . n A 1 264 CYS 264 266 266 CYS CYS A . n A 1 265 GLN 265 267 267 GLN GLN A . n A 1 266 THR 266 268 268 THR THR A . n A 1 267 GLN 267 269 269 GLN GLN A . n A 1 268 ASP 268 270 270 ASP ASP A . n A 1 269 LYS 269 271 271 LYS LYS A . n A 1 270 ASP 270 272 272 ASP ASP A . n A 1 271 ALA 271 273 273 ALA ALA A . n A 1 272 ASP 272 274 274 ASP ASP A . n A 1 273 MET 273 275 275 MET MET A . n A 1 274 LEU 274 276 276 LEU LEU A . n A 1 275 THR 275 277 277 THR THR A . n A 1 276 GLY 276 278 278 GLY GLY A . n A 1 277 ASP 277 279 279 ASP ASP A . n A 1 278 GLU 278 280 280 GLU GLU A . n A 1 279 GLN 279 281 281 GLN GLN A . n A 1 280 VAL 280 282 282 VAL VAL A . n A 1 281 TRP 281 283 283 TRP TRP A . n A 1 282 LYS 282 284 284 LYS LYS A . n A 1 283 GLU 283 285 285 GLU GLU A . n A 1 284 VAL 284 286 286 VAL VAL A . n A 1 285 GLN 285 287 287 GLN GLN A . n A 1 286 GLU 286 288 288 GLU GLU A . n A 1 287 SER 287 289 289 SER SER A . n A 1 288 LEU 288 290 290 LEU LEU A . n A 1 289 LYS 289 291 291 LYS LYS A . n A 1 290 LYS 290 292 292 LYS LYS A . n A 1 291 ILE 291 293 293 ILE ILE A . n A 1 292 GLU 292 294 294 GLU GLU A . n A 1 293 GLU 293 295 295 GLU GLU A . n A 1 294 LEU 294 296 296 LEU LEU A . n A 1 295 LYS 295 297 297 LYS LYS A . n A 1 296 ALA 296 298 298 ALA ALA A . n A 1 297 HIS 297 299 299 HIS HIS A . n A 1 298 TRP 298 300 300 TRP TRP A . n A 1 299 LYS 299 301 301 LYS LYS A . n A 1 300 TRP 300 302 302 TRP TRP A . n A 1 301 GLU 301 303 303 GLU GLU A . n A 1 302 GLN 302 304 304 GLN GLN A . n A 1 303 VAL 303 305 305 VAL VAL A . n A 1 304 LEU 304 306 306 LEU LEU A . n A 1 305 ALA 305 307 307 ALA ALA A . n A 1 306 MET 306 308 308 MET MET A . n A 1 307 CYS 307 309 309 CYS CYS A . n A 1 308 GLN 308 310 310 GLN GLN A . n A 1 309 ALA 309 311 311 ALA ALA A . n A 1 310 ILE 310 312 312 ILE ILE A . n A 1 311 ILE 311 313 313 ILE ILE A . n A 1 312 SER 312 314 314 SER SER A . n A 1 313 SER 313 315 315 SER SER A . n A 1 314 ASN 314 316 316 ASN ASN A . n A 1 315 SER 315 317 317 SER SER A . n A 1 316 GLU 316 318 318 GLU GLU A . n A 1 317 ARG 317 319 319 ARG ARG A . n A 1 318 LEU 318 320 320 LEU LEU A . n A 1 319 PRO 319 321 321 PRO PRO A . n A 1 320 ASP 320 322 322 ASP ASP A . n A 1 321 ILE 321 323 323 ILE ILE A . n A 1 322 ASN 322 324 324 ASN ASN A . n A 1 323 ILE 323 325 325 ILE ILE A . n A 1 324 TYR 324 326 326 TYR TYR A . n A 1 325 GLN 325 327 327 GLN GLN A . n A 1 326 LEU 326 328 328 LEU LEU A . n A 1 327 LYS 327 329 329 LYS LYS A . n A 1 328 VAL 328 330 330 VAL VAL A . n A 1 329 LEU 329 331 331 LEU LEU A . n A 1 330 ASP 330 332 332 ASP ASP A . n A 1 331 CYS 331 333 333 CYS CYS A . n A 1 332 ALA 332 334 334 ALA ALA A . n A 1 333 MET 333 335 335 MET MET A . n A 1 334 ASP 334 336 336 ASP ASP A . n A 1 335 ALA 335 337 337 ALA ALA A . n A 1 336 CYS 336 338 338 CYS CYS A . n A 1 337 ILE 337 339 339 ILE ILE A . n A 1 338 ASN 338 340 340 ASN ASN A . n A 1 339 LEU 339 341 341 LEU LEU A . n A 1 340 GLY 340 342 342 GLY GLY A . n A 1 341 LEU 341 343 343 LEU LEU A . n A 1 342 LEU 342 344 344 LEU LEU A . n A 1 343 GLU 343 345 345 GLU GLU A . n A 1 344 GLU 344 346 346 GLU GLU A . n A 1 345 ALA 345 347 347 ALA ALA A . n A 1 346 LEU 346 348 348 LEU LEU A . n A 1 347 PHE 347 349 349 PHE PHE A . n A 1 348 TYR 348 350 350 TYR TYR A . n A 1 349 GLY 349 351 351 GLY GLY A . n A 1 350 THR 350 352 352 THR THR A . n A 1 351 ARG 351 353 353 ARG ARG A . n A 1 352 THR 352 354 354 THR THR A . n A 1 353 MET 353 355 355 MET MET A . n A 1 354 GLU 354 356 356 GLU GLU A . n A 1 355 PRO 355 357 357 PRO PRO A . n A 1 356 TYR 356 358 358 TYR TYR A . n A 1 357 ARG 357 359 359 ARG ARG A . n A 1 358 ILE 358 360 360 ILE ILE A . n A 1 359 PHE 359 361 361 PHE PHE A . n A 1 360 PHE 360 362 362 PHE PHE A . n A 1 361 PRO 361 363 363 PRO PRO A . n A 1 362 GLY 362 364 364 GLY GLY A . n A 1 363 SER 363 365 365 SER SER A . n A 1 364 HIS 364 366 366 HIS HIS A . n A 1 365 PRO 365 367 367 PRO PRO A . n A 1 366 VAL 366 368 368 VAL VAL A . n A 1 367 ARG 367 369 369 ARG ARG A . n A 1 368 GLY 368 370 370 GLY GLY A . n A 1 369 VAL 369 371 371 VAL VAL A . n A 1 370 GLN 370 372 372 GLN GLN A . n A 1 371 VAL 371 373 373 VAL VAL A . n A 1 372 MET 372 374 374 MET MET A . n A 1 373 LYS 373 375 375 LYS LYS A . n A 1 374 VAL 374 376 376 VAL VAL A . n A 1 375 GLY 375 377 377 GLY GLY A . n A 1 376 LYS 376 378 378 LYS LYS A . n A 1 377 LEU 377 379 379 LEU LEU A . n A 1 378 GLN 378 380 380 GLN GLN A . n A 1 379 LEU 379 381 381 LEU LEU A . n A 1 380 HIS 380 382 382 HIS HIS A . n A 1 381 GLN 381 383 383 GLN GLN A . n A 1 382 GLY 382 384 384 GLY GLY A . n A 1 383 MET 383 385 385 MET MET A . n A 1 384 PHE 384 386 386 PHE PHE A . n A 1 385 PRO 385 387 387 PRO PRO A . n A 1 386 GLN 386 388 388 GLN GLN A . n A 1 387 ALA 387 389 389 ALA ALA A . n A 1 388 MET 388 390 390 MET MET A . n A 1 389 LYS 389 391 391 LYS LYS A . n A 1 390 ASN 390 392 392 ASN ASN A . n A 1 391 LEU 391 393 393 LEU LEU A . n A 1 392 ARG 392 394 394 ARG ARG A . n A 1 393 LEU 393 395 395 LEU LEU A . n A 1 394 ALA 394 396 396 ALA ALA A . n A 1 395 PHE 395 397 397 PHE PHE A . n A 1 396 ASP 396 398 398 ASP ASP A . n A 1 397 ILE 397 399 399 ILE ILE A . n A 1 398 MET 398 400 400 MET MET A . n A 1 399 ARG 399 401 401 ARG ARG A . n A 1 400 VAL 400 402 402 VAL VAL A . n A 1 401 THR 401 403 403 THR THR A . n A 1 402 HIS 402 404 404 HIS HIS A . n A 1 403 GLY 403 405 405 GLY GLY A . n A 1 404 ARG 404 406 406 ARG ARG A . n A 1 405 GLU 405 407 407 GLU GLU A . n A 1 406 HIS 406 408 408 HIS HIS A . n A 1 407 SER 407 409 409 SER SER A . n A 1 408 LEU 408 410 410 LEU LEU A . n A 1 409 ILE 409 411 411 ILE ILE A . n A 1 410 GLU 410 412 412 GLU GLU A . n A 1 411 ASP 411 413 413 ASP ASP A . n A 1 412 LEU 412 414 414 LEU LEU A . n A 1 413 ILE 413 415 415 ILE ILE A . n A 1 414 LEU 414 416 416 LEU LEU A . n A 1 415 LEU 415 417 417 LEU LEU A . n A 1 416 LEU 416 418 418 LEU LEU A . n A 1 417 GLU 417 419 419 GLU GLU A . n A 1 418 GLU 418 420 420 GLU GLU A . n A 1 419 CYS 419 421 421 CYS CYS A . n A 1 420 ASP 420 422 422 ASP ASP A . n A 1 421 ALA 421 423 423 ALA ALA A . n A 1 422 ASN 422 424 424 ASN ASN A . n A 1 423 ILE 423 425 425 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 501 500 ZN ZN A . C 2 ZN 1 502 501 ZN ZN A . D 2 ZN 1 503 502 ZN ZN A . E 3 8W0 1 504 1 8W0 DRG A . F 4 SAM 1 505 511 SAM SAM A . G 5 HOH 1 601 140 HOH HOH A . G 5 HOH 2 602 63 HOH HOH A . G 5 HOH 3 603 73 HOH HOH A . G 5 HOH 4 604 98 HOH HOH A . G 5 HOH 5 605 22 HOH HOH A . G 5 HOH 6 606 41 HOH HOH A . G 5 HOH 7 607 81 HOH HOH A . G 5 HOH 8 608 7 HOH HOH A . G 5 HOH 9 609 124 HOH HOH A . G 5 HOH 10 610 14 HOH HOH A . G 5 HOH 11 611 48 HOH HOH A . G 5 HOH 12 612 23 HOH HOH A . G 5 HOH 13 613 135 HOH HOH A . G 5 HOH 14 614 85 HOH HOH A . G 5 HOH 15 615 31 HOH HOH A . G 5 HOH 16 616 106 HOH HOH A . G 5 HOH 17 617 32 HOH HOH A . G 5 HOH 18 618 60 HOH HOH A . G 5 HOH 19 619 8 HOH HOH A . G 5 HOH 20 620 45 HOH HOH A . G 5 HOH 21 621 1 HOH HOH A . G 5 HOH 22 622 96 HOH HOH A . G 5 HOH 23 623 75 HOH HOH A . G 5 HOH 24 624 19 HOH HOH A . G 5 HOH 25 625 150 HOH HOH A . G 5 HOH 26 626 57 HOH HOH A . G 5 HOH 27 627 117 HOH HOH A . G 5 HOH 28 628 58 HOH HOH A . G 5 HOH 29 629 13 HOH HOH A . G 5 HOH 30 630 64 HOH HOH A . G 5 HOH 31 631 86 HOH HOH A . G 5 HOH 32 632 79 HOH HOH A . G 5 HOH 33 633 61 HOH HOH A . G 5 HOH 34 634 56 HOH HOH A . G 5 HOH 35 635 113 HOH HOH A . G 5 HOH 36 636 84 HOH HOH A . G 5 HOH 37 637 2 HOH HOH A . G 5 HOH 38 638 5 HOH HOH A . G 5 HOH 39 639 78 HOH HOH A . G 5 HOH 40 640 12 HOH HOH A . G 5 HOH 41 641 26 HOH HOH A . G 5 HOH 42 642 27 HOH HOH A . G 5 HOH 43 643 104 HOH HOH A . G 5 HOH 44 644 59 HOH HOH A . G 5 HOH 45 645 110 HOH HOH A . G 5 HOH 46 646 101 HOH HOH A . G 5 HOH 47 647 37 HOH HOH A . G 5 HOH 48 648 112 HOH HOH A . G 5 HOH 49 649 29 HOH HOH A . G 5 HOH 50 650 146 HOH HOH A . G 5 HOH 51 651 24 HOH HOH A . G 5 HOH 52 652 30 HOH HOH A . G 5 HOH 53 653 53 HOH HOH A . G 5 HOH 54 654 114 HOH HOH A . G 5 HOH 55 655 123 HOH HOH A . G 5 HOH 56 656 107 HOH HOH A . G 5 HOH 57 657 42 HOH HOH A . G 5 HOH 58 658 15 HOH HOH A . G 5 HOH 59 659 25 HOH HOH A . G 5 HOH 60 660 54 HOH HOH A . G 5 HOH 61 661 36 HOH HOH A . G 5 HOH 62 662 10 HOH HOH A . G 5 HOH 63 663 147 HOH HOH A . G 5 HOH 64 664 66 HOH HOH A . G 5 HOH 65 665 21 HOH HOH A . G 5 HOH 66 666 28 HOH HOH A . G 5 HOH 67 667 125 HOH HOH A . G 5 HOH 68 668 9 HOH HOH A . G 5 HOH 69 669 127 HOH HOH A . G 5 HOH 70 670 49 HOH HOH A . G 5 HOH 71 671 6 HOH HOH A . G 5 HOH 72 672 69 HOH HOH A . G 5 HOH 73 673 139 HOH HOH A . G 5 HOH 74 674 3 HOH HOH A . G 5 HOH 75 675 34 HOH HOH A . G 5 HOH 76 676 82 HOH HOH A . G 5 HOH 77 677 134 HOH HOH A . G 5 HOH 78 678 77 HOH HOH A . G 5 HOH 79 679 108 HOH HOH A . G 5 HOH 80 680 71 HOH HOH A . G 5 HOH 81 681 129 HOH HOH A . G 5 HOH 82 682 39 HOH HOH A . G 5 HOH 83 683 44 HOH HOH A . G 5 HOH 84 684 40 HOH HOH A . G 5 HOH 85 685 109 HOH HOH A . G 5 HOH 86 686 91 HOH HOH A . G 5 HOH 87 687 158 HOH HOH A . G 5 HOH 88 688 126 HOH HOH A . G 5 HOH 89 689 46 HOH HOH A . G 5 HOH 90 690 120 HOH HOH A . G 5 HOH 91 691 136 HOH HOH A . G 5 HOH 92 692 90 HOH HOH A . G 5 HOH 93 693 43 HOH HOH A . G 5 HOH 94 694 18 HOH HOH A . G 5 HOH 95 695 68 HOH HOH A . G 5 HOH 96 696 141 HOH HOH A . G 5 HOH 97 697 33 HOH HOH A . G 5 HOH 98 698 16 HOH HOH A . G 5 HOH 99 699 137 HOH HOH A . G 5 HOH 100 700 102 HOH HOH A . G 5 HOH 101 701 83 HOH HOH A . G 5 HOH 102 702 88 HOH HOH A . G 5 HOH 103 703 144 HOH HOH A . G 5 HOH 104 704 20 HOH HOH A . G 5 HOH 105 705 67 HOH HOH A . G 5 HOH 106 706 121 HOH HOH A . G 5 HOH 107 707 74 HOH HOH A . G 5 HOH 108 708 76 HOH HOH A . G 5 HOH 109 709 70 HOH HOH A . G 5 HOH 110 710 157 HOH HOH A . G 5 HOH 111 711 87 HOH HOH A . G 5 HOH 112 712 131 HOH HOH A . G 5 HOH 113 713 50 HOH HOH A . G 5 HOH 114 714 11 HOH HOH A . G 5 HOH 115 715 105 HOH HOH A . G 5 HOH 116 716 152 HOH HOH A . G 5 HOH 117 717 130 HOH HOH A . G 5 HOH 118 718 118 HOH HOH A . G 5 HOH 119 719 145 HOH HOH A . G 5 HOH 120 720 89 HOH HOH A . G 5 HOH 121 721 35 HOH HOH A . G 5 HOH 122 722 97 HOH HOH A . G 5 HOH 123 723 52 HOH HOH A . G 5 HOH 124 724 133 HOH HOH A . G 5 HOH 125 725 115 HOH HOH A . G 5 HOH 126 726 38 HOH HOH A . G 5 HOH 127 727 156 HOH HOH A . G 5 HOH 128 728 92 HOH HOH A . G 5 HOH 129 729 47 HOH HOH A . G 5 HOH 130 730 116 HOH HOH A . G 5 HOH 131 731 103 HOH HOH A . G 5 HOH 132 732 65 HOH HOH A . G 5 HOH 133 733 94 HOH HOH A . G 5 HOH 134 734 93 HOH HOH A . G 5 HOH 135 735 119 HOH HOH A . G 5 HOH 136 736 51 HOH HOH A . G 5 HOH 137 737 4 HOH HOH A . G 5 HOH 138 738 99 HOH HOH A . G 5 HOH 139 739 72 HOH HOH A . G 5 HOH 140 740 80 HOH HOH A . G 5 HOH 141 741 155 HOH HOH A . G 5 HOH 142 742 122 HOH HOH A . G 5 HOH 143 743 132 HOH HOH A . G 5 HOH 144 744 148 HOH HOH A . G 5 HOH 145 745 17 HOH HOH A . G 5 HOH 146 746 55 HOH HOH A . G 5 HOH 147 747 149 HOH HOH A . G 5 HOH 148 748 154 HOH HOH A . G 5 HOH 149 749 100 HOH HOH A . G 5 HOH 150 750 128 HOH HOH A . G 5 HOH 151 751 62 HOH HOH A . G 5 HOH 152 752 95 HOH HOH A . G 5 HOH 153 753 143 HOH HOH A . G 5 HOH 154 754 111 HOH HOH A . G 5 HOH 155 755 138 HOH HOH A . G 5 HOH 156 756 153 HOH HOH A . G 5 HOH 157 757 142 HOH HOH A . G 5 HOH 158 758 151 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 19420 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 47 ? A CYS 49 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 50 ? A CYS 52 ? 1_555 107.7 ? 2 SG ? A CYS 47 ? A CYS 49 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 69 ? A CYS 71 ? 1_555 114.0 ? 3 SG ? A CYS 50 ? A CYS 52 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 69 ? A CYS 71 ? 1_555 106.5 ? 4 SG ? A CYS 47 ? A CYS 49 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 73 ? A CYS 75 ? 1_555 108.7 ? 5 SG ? A CYS 50 ? A CYS 52 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 73 ? A CYS 75 ? 1_555 116.4 ? 6 SG ? A CYS 69 ? A CYS 71 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 73 ? A CYS 75 ? 1_555 103.7 ? 7 SG ? A CYS 60 ? A CYS 62 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 63 ? A CYS 65 ? 1_555 109.2 ? 8 SG ? A CYS 60 ? A CYS 62 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 81 ? A HIS 83 ? 1_555 114.3 ? 9 SG ? A CYS 63 ? A CYS 65 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 81 ? A HIS 83 ? 1_555 109.2 ? 10 SG ? A CYS 60 ? A CYS 62 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 85 ? A CYS 87 ? 1_555 110.4 ? 11 SG ? A CYS 63 ? A CYS 65 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 85 ? A CYS 87 ? 1_555 110.3 ? 12 NE2 ? A HIS 81 ? A HIS 83 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 85 ? A CYS 87 ? 1_555 103.3 ? 13 SG ? A CYS 206 ? A CYS 208 ? 1_555 ZN ? D ZN . ? A ZN 503 ? 1_555 SG ? A CYS 259 ? A CYS 261 ? 1_555 114.4 ? 14 SG ? A CYS 206 ? A CYS 208 ? 1_555 ZN ? D ZN . ? A ZN 503 ? 1_555 SG ? A CYS 261 ? A CYS 263 ? 1_555 109.6 ? 15 SG ? A CYS 259 ? A CYS 261 ? 1_555 ZN ? D ZN . ? A ZN 503 ? 1_555 SG ? A CYS 261 ? A CYS 263 ? 1_555 108.4 ? 16 SG ? A CYS 206 ? A CYS 208 ? 1_555 ZN ? D ZN . ? A ZN 503 ? 1_555 SG ? A CYS 264 ? A CYS 266 ? 1_555 101.8 ? 17 SG ? A CYS 259 ? A CYS 261 ? 1_555 ZN ? D ZN . ? A ZN 503 ? 1_555 SG ? A CYS 264 ? A CYS 266 ? 1_555 111.9 ? 18 SG ? A CYS 261 ? A CYS 263 ? 1_555 ZN ? D ZN . ? A ZN 503 ? 1_555 SG ? A CYS 264 ? A CYS 266 ? 1_555 110.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-17 2 'Structure model' 1 1 2019-07-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_validate_close_contact 4 2 'Structure model' struct_conn 5 2 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11.1_2575 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 186 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CAJ _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 8W0 _pdbx_validate_close_contact.auth_seq_id_2 504 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.77 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 13 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -144.84 _pdbx_validate_torsion.psi 17.67 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 25 ? CG ? A ARG 23 CG 2 1 Y 1 A ARG 25 ? CD ? A ARG 23 CD 3 1 Y 1 A ARG 25 ? NE ? A ARG 23 NE 4 1 Y 1 A ARG 25 ? CZ ? A ARG 23 CZ 5 1 Y 1 A ARG 25 ? NH1 ? A ARG 23 NH1 6 1 Y 1 A ARG 25 ? NH2 ? A ARG 23 NH2 7 1 Y 1 A GLU 57 ? CG ? A GLU 55 CG 8 1 Y 1 A GLU 57 ? CD ? A GLU 55 CD 9 1 Y 1 A GLU 57 ? OE1 ? A GLU 55 OE1 10 1 Y 1 A GLU 57 ? OE2 ? A GLU 55 OE2 11 1 Y 1 A LYS 58 ? CG ? A LYS 56 CG 12 1 Y 1 A LYS 58 ? CD ? A LYS 56 CD 13 1 Y 1 A LYS 58 ? CE ? A LYS 56 CE 14 1 Y 1 A LYS 58 ? NZ ? A LYS 56 NZ 15 1 Y 1 A LYS 88 ? CG ? A LYS 86 CG 16 1 Y 1 A LYS 88 ? CD ? A LYS 86 CD 17 1 Y 1 A LYS 88 ? CE ? A LYS 86 CE 18 1 Y 1 A LYS 88 ? NZ ? A LYS 86 NZ 19 1 Y 1 A LYS 94 ? CG ? A LYS 92 CG 20 1 Y 1 A LYS 94 ? CD ? A LYS 92 CD 21 1 Y 1 A LYS 94 ? CE ? A LYS 92 CE 22 1 Y 1 A LYS 94 ? NZ ? A LYS 92 NZ 23 1 Y 1 A ARG 96 ? CG ? A ARG 94 CG 24 1 Y 1 A ARG 96 ? CD ? A ARG 94 CD 25 1 Y 1 A ARG 96 ? NE ? A ARG 94 NE 26 1 Y 1 A ARG 96 ? CZ ? A ARG 94 CZ 27 1 Y 1 A ARG 96 ? NH1 ? A ARG 94 NH1 28 1 Y 1 A ARG 96 ? NH2 ? A ARG 94 NH2 29 1 Y 1 A GLU 138 ? CG ? A GLU 136 CG 30 1 Y 1 A GLU 138 ? CD ? A GLU 136 CD 31 1 Y 1 A GLU 138 ? OE1 ? A GLU 136 OE1 32 1 Y 1 A GLU 138 ? OE2 ? A GLU 136 OE2 33 1 Y 1 A GLN 281 ? CG ? A GLN 279 CG 34 1 Y 1 A GLN 281 ? CD ? A GLN 279 CD 35 1 Y 1 A GLN 281 ? OE1 ? A GLN 279 OE1 36 1 Y 1 A GLN 281 ? NE2 ? A GLN 279 NE2 37 1 Y 1 A LYS 292 ? CG ? A LYS 290 CG 38 1 Y 1 A LYS 292 ? CD ? A LYS 290 CD 39 1 Y 1 A LYS 292 ? CE ? A LYS 290 CE 40 1 Y 1 A LYS 292 ? NZ ? A LYS 290 NZ 41 1 Y 1 A LYS 391 ? CG ? A LYS 389 CG 42 1 Y 1 A LYS 391 ? CD ? A LYS 389 CD 43 1 Y 1 A LYS 391 ? CE ? A LYS 389 CE 44 1 Y 1 A LYS 391 ? NZ ? A LYS 389 NZ 45 1 Y 1 A ASP 422 ? CG ? A ASP 420 CG 46 1 Y 1 A ASP 422 ? OD1 ? A ASP 420 OD1 47 1 Y 1 A ASP 422 ? OD2 ? A ASP 420 OD2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'propyl (3~{S})-4-[[(6~{R})-6-(aminomethyl)-5,6,7,8-tetrahydroacridin-3-yl]carbonyl]-3-methyl-piperazine-1-carboxylate' 8W0 4 S-ADENOSYLMETHIONINE SAM 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? #