HEADER OXIDOREDUCTASE 11-OCT-17 5YJY TITLE STRUCTURE OF THE NDI1 PROTEIN FROM SACCHAROMYCES CEREVISIAE IN COMPLEX TITLE 2 WITH AC0-12. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ROTENONE-INSENSITIVE NADH-UBIQUINONE OXIDOREDUCTASE, COMPND 3 MITOCHONDRIAL; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 29-513; COMPND 6 SYNONYM: INTERNAL NADH DEHYDROGENASE,NADH:UBIQUINONE REDUCTASE (NON- COMPND 7 ELECTROGENIC); COMPND 8 EC: 1.6.5.9; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: ROTENONE-INSENSITIVE NADH-UBIQUINONE OXIDOREDUCTASE, COMPND 12 MITOCHONDRIAL; COMPND 13 CHAIN: B; COMPND 14 FRAGMENT: UNP RESIDUES 28-513; COMPND 15 SYNONYM: INTERNAL NADH DEHYDROGENASE,NADH:UBIQUINONE REDUCTASE (NON- COMPND 16 ELECTROGENIC); COMPND 17 EC: 1.6.5.9; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: NDI1, YML120C, YM7056.06C; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 12 S288C); SOURCE 13 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 14 ORGANISM_TAXID: 559292; SOURCE 15 STRAIN: ATCC 204508 / S288C; SOURCE 16 GENE: NDI1, YML120C, YM7056.06C; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MONOTOPIC MEMBRANE PROTEIN, NUCLEOTIDE-BINDING DOMAIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.YAMASITA,D.K.INAOKA,T.SHIBA,T.OOHASHI,S.IWATA,T.YAGI,H.KOSAKA, AUTHOR 2 S.HARADA,K.KITA,K.HIRANO REVDAT 3 22-NOV-23 5YJY 1 LINK REVDAT 2 21-FEB-18 5YJY 1 JRNL REVDAT 1 14-FEB-18 5YJY 0 JRNL AUTH T.YAMASHITA,D.K.INAOKA,T.SHIBA,T.OOHASHI,S.IWATA,T.YAGI, JRNL AUTH 2 H.KOSAKA,H.MIYOSHI,S.HARADA,K.KITA,K.HIRANO JRNL TITL UBIQUINONE BINDING SITE OF YEAST NADH DEHYDROGENASE REVEALED JRNL TITL 2 BY STRUCTURES BINDING NOVEL COMPETITIVE- AND MIXED-TYPE JRNL TITL 3 INHIBITORS JRNL REF SCI REP V. 8 2427 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29402945 JRNL DOI 10.1038/S41598-018-20775-6 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 82.1 REMARK 3 NUMBER OF REFLECTIONS : 15012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 807 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 529 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 40.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.3940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7280 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 176 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.37000 REMARK 3 B22 (A**2) : -3.17000 REMARK 3 B33 (A**2) : -4.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.780 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.507 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.628 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.822 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7682 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7469 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10420 ; 1.609 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17217 ; 0.838 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 936 ; 8.191 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 317 ;40.546 ;24.164 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1314 ;20.583 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;17.741 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1153 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8526 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1729 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5YJY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1300005423. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18371 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.77300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4G9K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM MES(PH 6.0), 34%(V/V) PEG 400, REMARK 280 100MM NACL, 2%(V/V) ETHYLENE GLYCOL, 5%(V/V) GLYCEROL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.92700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.24950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.89750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.24950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.92700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.89750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 147 REMARK 465 SER A 148 REMARK 465 GLN A 149 REMARK 465 LEU A 150 REMARK 465 TYR A 151 REMARK 465 GLN A 152 REMARK 465 PRO A 153 REMARK 465 GLU A 154 REMARK 465 ASN A 155 REMARK 465 HIS A 156 REMARK 465 LEU A 157 REMARK 465 GLY A 158 REMARK 465 LEU A 159 REMARK 465 HIS A 160 REMARK 465 GLN A 161 REMARK 465 ALA A 162 REMARK 465 GLU A 163 REMARK 465 LEU A 420 REMARK 465 SER A 421 REMARK 465 SER A 422 REMARK 465 ARG A 423 REMARK 465 LYS A 424 REMARK 465 VAL B 147 REMARK 465 SER B 148 REMARK 465 GLN B 149 REMARK 465 LEU B 150 REMARK 465 TYR B 151 REMARK 465 GLN B 152 REMARK 465 PRO B 153 REMARK 465 GLU B 154 REMARK 465 ASN B 155 REMARK 465 HIS B 156 REMARK 465 LEU B 157 REMARK 465 GLY B 158 REMARK 465 LEU B 159 REMARK 465 HIS B 160 REMARK 465 GLN B 161 REMARK 465 ALA B 162 REMARK 465 GLU B 163 REMARK 465 SER B 421 REMARK 465 SER B 422 REMARK 465 ARG B 423 REMARK 465 LYS B 424 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 126 CB CG CD OE1 OE2 REMARK 470 GLU A 166 CB CG CD OE1 OE2 REMARK 470 ASP A 249 CG OD1 OD2 REMARK 470 TYR A 449 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 449 OH REMARK 470 GLU B 126 CB CG CD OE1 OE2 REMARK 470 GLU B 310 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 186 C - N - CD ANGL. DEV. = -38.5 DEGREES REMARK 500 ARG B 460 CB - CA - C ANGL. DEV. = -13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 30 -10.60 81.28 REMARK 500 THR A 38 -10.14 -45.70 REMARK 500 VAL A 45 -142.98 -125.29 REMARK 500 ILE A 111 -52.61 -22.40 REMARK 500 ASN A 113 -8.87 -58.64 REMARK 500 LYS A 119 -78.11 -66.41 REMARK 500 THR A 130 -44.86 -143.50 REMARK 500 LEU A 144 20.26 -72.43 REMARK 500 ARG A 206 -90.70 -32.84 REMARK 500 LEU A 212 -48.36 -28.15 REMARK 500 THR A 239 -71.51 -38.18 REMARK 500 ASP A 249 -34.31 -35.48 REMARK 500 HIS A 252 -82.10 -49.91 REMARK 500 ASP A 254 -93.45 -94.55 REMARK 500 LYS A 257 -91.00 -43.22 REMARK 500 SER A 297 21.36 103.92 REMARK 500 SER A 297 27.64 100.04 REMARK 500 ASP A 322 36.84 -67.72 REMARK 500 ALA A 338 68.84 -108.19 REMARK 500 LYS A 342 127.39 -173.81 REMARK 500 LYS A 342 127.39 -170.86 REMARK 500 GLN A 357 10.97 -69.83 REMARK 500 SER A 360 99.82 -68.66 REMARK 500 ASN A 367 -168.45 -73.19 REMARK 500 LYS A 373 98.58 -66.64 REMARK 500 SER A 375 -164.44 -122.42 REMARK 500 ASN A 376 -69.04 -147.64 REMARK 500 ASN A 377 -4.97 -47.28 REMARK 500 PRO A 391 71.64 -105.81 REMARK 500 LYS A 405 -71.91 -55.84 REMARK 500 ASN A 406 -32.88 -30.37 REMARK 500 ASN A 435 64.09 66.18 REMARK 500 LEU A 444 41.22 -146.68 REMARK 500 ALA A 448 129.50 -172.87 REMARK 500 SER A 452 65.45 37.94 REMARK 500 GLU A 453 42.25 38.80 REMARK 500 PHE A 466 -75.91 -54.34 REMARK 500 THR A 468 59.95 -165.98 REMARK 500 ARG A 479 -76.57 -57.18 REMARK 500 ILE A 500 -70.70 -56.78 REMARK 500 LYS A 506 -170.73 -47.03 REMARK 500 PHE A 509 59.63 -114.76 REMARK 500 VAL B 30 -61.32 -151.90 REMARK 500 GLU B 31 -74.75 -159.83 REMARK 500 MET B 43 68.47 -65.00 REMARK 500 VAL B 45 -133.05 -137.21 REMARK 500 HIS B 50 88.38 -69.81 REMARK 500 PRO B 95 -5.99 -58.55 REMARK 500 VAL B 112 -52.93 -22.19 REMARK 500 ASN B 113 -7.78 -57.26 REMARK 500 REMARK 500 THIS ENTRY HAS 79 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 426 ILE A 427 -148.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 8WF A 606 REMARK 610 8WF B 606 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 175 O REMARK 620 2 FAD A 601 O1P 114.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 381 O REMARK 620 2 FAD A 601 O2P 115.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 605 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 FAD A 601 O2A REMARK 620 2 FAD A 601 O3P 59.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 175 O REMARK 620 2 FAD B 601 O5B 90.8 REMARK 620 3 FAD B 601 O1P 117.3 77.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 FAD B 601 O2P REMARK 620 2 FAD B 601 O3P 53.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 605 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 FAD B 601 O2A REMARK 620 2 FAD B 601 O3P 60.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8WF A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8WF B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 607 DBREF 5YJY A 29 513 UNP P32340 NDI1_YEAST 29 513 DBREF 5YJY B 28 513 UNP P32340 NDI1_YEAST 28 513 SEQRES 1 A 485 GLY VAL GLU ASN SER GLY ALA GLY PRO THR SER PHE LYS SEQRES 2 A 485 THR MET LYS VAL ILE ASP PRO GLN HIS SER ASP LYS PRO SEQRES 3 A 485 ASN VAL LEU ILE LEU GLY SER GLY TRP GLY ALA ILE SER SEQRES 4 A 485 PHE LEU LYS HIS ILE ASP THR LYS LYS TYR ASN VAL SER SEQRES 5 A 485 ILE ILE SER PRO ARG SER TYR PHE LEU PHE THR PRO LEU SEQRES 6 A 485 LEU PRO SER ALA PRO VAL GLY THR VAL ASP GLU LYS SER SEQRES 7 A 485 ILE ILE GLU PRO ILE VAL ASN PHE ALA LEU LYS LYS LYS SEQRES 8 A 485 GLY ASN VAL THR TYR TYR GLU ALA GLU ALA THR SER ILE SEQRES 9 A 485 ASN PRO ASP ARG ASN THR VAL THR ILE LYS SER LEU SER SEQRES 10 A 485 ALA VAL SER GLN LEU TYR GLN PRO GLU ASN HIS LEU GLY SEQRES 11 A 485 LEU HIS GLN ALA GLU PRO ALA GLU ILE LYS TYR ASP TYR SEQRES 12 A 485 LEU ILE SER ALA VAL GLY ALA GLU PRO ASN THR PHE GLY SEQRES 13 A 485 ILE PRO GLY VAL THR ASP TYR GLY HIS PHE LEU LYS GLU SEQRES 14 A 485 ILE PRO ASN SER LEU GLU ILE ARG ARG THR PHE ALA ALA SEQRES 15 A 485 ASN LEU GLU LYS ALA ASN LEU LEU PRO LYS GLY ASP PRO SEQRES 16 A 485 GLU ARG ARG ARG LEU LEU SER ILE VAL VAL VAL GLY GLY SEQRES 17 A 485 GLY PRO THR GLY VAL GLU ALA ALA GLY GLU LEU GLN ASP SEQRES 18 A 485 TYR VAL HIS GLN ASP LEU ARG LYS PHE LEU PRO ALA LEU SEQRES 19 A 485 ALA GLU GLU VAL GLN ILE HIS LEU VAL GLU ALA LEU PRO SEQRES 20 A 485 ILE VAL LEU ASN MET PHE GLU LYS LYS LEU SER SER TYR SEQRES 21 A 485 ALA GLN SER HIS LEU GLU ASN THR SER ILE LYS VAL HIS SEQRES 22 A 485 LEU ARG THR ALA VAL ALA LYS VAL GLU GLU LYS GLN LEU SEQRES 23 A 485 LEU ALA LYS THR LYS HIS GLU ASP GLY LYS ILE THR GLU SEQRES 24 A 485 GLU THR ILE PRO TYR GLY THR LEU ILE TRP ALA THR GLY SEQRES 25 A 485 ASN LYS ALA ARG PRO VAL ILE THR ASP LEU PHE LYS LYS SEQRES 26 A 485 ILE PRO GLU GLN ASN SER SER LYS ARG GLY LEU ALA VAL SEQRES 27 A 485 ASN ASP PHE LEU GLN VAL LYS GLY SER ASN ASN ILE PHE SEQRES 28 A 485 ALA ILE GLY ASP ASN ALA PHE ALA GLY LEU PRO PRO THR SEQRES 29 A 485 ALA GLN VAL ALA HIS GLN GLU ALA GLU TYR LEU ALA LYS SEQRES 30 A 485 ASN PHE ASP LYS MET ALA GLN ILE PRO ASN PHE GLN LYS SEQRES 31 A 485 ASN LEU SER SER ARG LYS ASP LYS ILE ASP LEU LEU PHE SEQRES 32 A 485 GLU GLU ASN ASN PHE LYS PRO PHE LYS TYR ASN ASP LEU SEQRES 33 A 485 GLY ALA LEU ALA TYR LEU GLY SER GLU ARG ALA ILE ALA SEQRES 34 A 485 THR ILE ARG SER GLY LYS ARG THR PHE TYR THR GLY GLY SEQRES 35 A 485 GLY LEU MET THR PHE TYR LEU TRP ARG ILE LEU TYR LEU SEQRES 36 A 485 SER MET ILE LEU SER ALA ARG SER ARG LEU LYS VAL PHE SEQRES 37 A 485 PHE ASP TRP ILE LYS LEU ALA PHE PHE LYS ARG ASP PHE SEQRES 38 A 485 PHE LYS GLY LEU SEQRES 1 B 486 THR GLY VAL GLU ASN SER GLY ALA GLY PRO THR SER PHE SEQRES 2 B 486 LYS THR MET LYS VAL ILE ASP PRO GLN HIS SER ASP LYS SEQRES 3 B 486 PRO ASN VAL LEU ILE LEU GLY SER GLY TRP GLY ALA ILE SEQRES 4 B 486 SER PHE LEU LYS HIS ILE ASP THR LYS LYS TYR ASN VAL SEQRES 5 B 486 SER ILE ILE SER PRO ARG SER TYR PHE LEU PHE THR PRO SEQRES 6 B 486 LEU LEU PRO SER ALA PRO VAL GLY THR VAL ASP GLU LYS SEQRES 7 B 486 SER ILE ILE GLU PRO ILE VAL ASN PHE ALA LEU LYS LYS SEQRES 8 B 486 LYS GLY ASN VAL THR TYR TYR GLU ALA GLU ALA THR SER SEQRES 9 B 486 ILE ASN PRO ASP ARG ASN THR VAL THR ILE LYS SER LEU SEQRES 10 B 486 SER ALA VAL SER GLN LEU TYR GLN PRO GLU ASN HIS LEU SEQRES 11 B 486 GLY LEU HIS GLN ALA GLU PRO ALA GLU ILE LYS TYR ASP SEQRES 12 B 486 TYR LEU ILE SER ALA VAL GLY ALA GLU PRO ASN THR PHE SEQRES 13 B 486 GLY ILE PRO GLY VAL THR ASP TYR GLY HIS PHE LEU LYS SEQRES 14 B 486 GLU ILE PRO ASN SER LEU GLU ILE ARG ARG THR PHE ALA SEQRES 15 B 486 ALA ASN LEU GLU LYS ALA ASN LEU LEU PRO LYS GLY ASP SEQRES 16 B 486 PRO GLU ARG ARG ARG LEU LEU SER ILE VAL VAL VAL GLY SEQRES 17 B 486 GLY GLY PRO THR GLY VAL GLU ALA ALA GLY GLU LEU GLN SEQRES 18 B 486 ASP TYR VAL HIS GLN ASP LEU ARG LYS PHE LEU PRO ALA SEQRES 19 B 486 LEU ALA GLU GLU VAL GLN ILE HIS LEU VAL GLU ALA LEU SEQRES 20 B 486 PRO ILE VAL LEU ASN MET PHE GLU LYS LYS LEU SER SER SEQRES 21 B 486 TYR ALA GLN SER HIS LEU GLU ASN THR SER ILE LYS VAL SEQRES 22 B 486 HIS LEU ARG THR ALA VAL ALA LYS VAL GLU GLU LYS GLN SEQRES 23 B 486 LEU LEU ALA LYS THR LYS HIS GLU ASP GLY LYS ILE THR SEQRES 24 B 486 GLU GLU THR ILE PRO TYR GLY THR LEU ILE TRP ALA THR SEQRES 25 B 486 GLY ASN LYS ALA ARG PRO VAL ILE THR ASP LEU PHE LYS SEQRES 26 B 486 LYS ILE PRO GLU GLN ASN SER SER LYS ARG GLY LEU ALA SEQRES 27 B 486 VAL ASN ASP PHE LEU GLN VAL LYS GLY SER ASN ASN ILE SEQRES 28 B 486 PHE ALA ILE GLY ASP ASN ALA PHE ALA GLY LEU PRO PRO SEQRES 29 B 486 THR ALA GLN VAL ALA HIS GLN GLU ALA GLU TYR LEU ALA SEQRES 30 B 486 LYS ASN PHE ASP LYS MET ALA GLN ILE PRO ASN PHE GLN SEQRES 31 B 486 LYS ASN LEU SER SER ARG LYS ASP LYS ILE ASP LEU LEU SEQRES 32 B 486 PHE GLU GLU ASN ASN PHE LYS PRO PHE LYS TYR ASN ASP SEQRES 33 B 486 LEU GLY ALA LEU ALA TYR LEU GLY SER GLU ARG ALA ILE SEQRES 34 B 486 ALA THR ILE ARG SER GLY LYS ARG THR PHE TYR THR GLY SEQRES 35 B 486 GLY GLY LEU MET THR PHE TYR LEU TRP ARG ILE LEU TYR SEQRES 36 B 486 LEU SER MET ILE LEU SER ALA ARG SER ARG LEU LYS VAL SEQRES 37 B 486 PHE PHE ASP TRP ILE LYS LEU ALA PHE PHE LYS ARG ASP SEQRES 38 B 486 PHE PHE LYS GLY LEU HET FAD A 601 53 HET MG A 602 1 HET MG A 603 1 HET MG A 604 1 HET MG A 605 1 HET 8WF A 606 19 HET MES A 607 12 HET FAD B 601 53 HET MG B 602 1 HET MG B 603 1 HET MG B 604 1 HET MG B 605 1 HET 8WF B 606 19 HET MES B 607 12 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM MG MAGNESIUM ION HETNAM 8WF 2-DODECYL-1-OXIDANIDYL-QUINOLIN-1-IUM-4-OL HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN 8WF 2-DODECYL -4-HYDROXY QUINOLINE N-OXIDE FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 MG 8(MG 2+) FORMUL 8 8WF 2(C21 H31 N O2) FORMUL 9 MES 2(C6 H13 N O4 S) HELIX 1 AA1 GLY A 64 ILE A 72 1 9 HELIX 2 AA2 THR A 91 ALA A 97 5 7 HELIX 3 AA3 ILE A 111 LEU A 116 1 6 HELIX 4 AA4 GLY A 187 GLY A 192 1 6 HELIX 5 AA5 GLU A 197 LEU A 217 1 21 HELIX 6 AA6 ASP A 222 LEU A 229 1 8 HELIX 7 AA7 GLY A 237 ASP A 254 1 18 HELIX 8 AA8 LEU A 259 VAL A 266 1 8 HELIX 9 AA9 GLU A 282 SER A 297 1 16 HELIX 10 AB1 ARG A 344 LYS A 353 1 10 HELIX 11 AB2 PRO A 355 SER A 360 5 6 HELIX 12 AB3 THR A 392 LYS A 409 1 18 HELIX 13 AB4 PRO A 414 LYS A 418 5 5 HELIX 14 AB5 ASP A 428 ASN A 434 1 7 HELIX 15 AB6 GLY A 471 ILE A 486 1 16 HELIX 16 AB7 SER A 488 PHE A 505 1 18 HELIX 17 AB8 GLY B 62 ILE B 72 1 11 HELIX 18 AB9 THR B 91 ALA B 97 5 7 HELIX 19 AC1 ILE B 111 LEU B 116 1 6 HELIX 20 AC2 GLY B 187 GLY B 192 1 6 HELIX 21 AC3 GLU B 197 LEU B 217 1 21 HELIX 22 AC4 ASP B 222 LEU B 229 1 8 HELIX 23 AC5 GLY B 237 ASP B 254 1 18 HELIX 24 AC6 LEU B 259 VAL B 266 1 8 HELIX 25 AC7 GLU B 282 THR B 296 1 15 HELIX 26 AC8 ARG B 344 LYS B 353 1 10 HELIX 27 AC9 THR B 392 ILE B 413 1 22 HELIX 28 AD1 ASP B 428 ASN B 434 1 7 HELIX 29 AD2 GLY B 470 ILE B 486 1 17 HELIX 30 AD3 SER B 488 PHE B 505 1 18 SHEET 1 AA1 6 GLY A 36 LYS A 41 0 SHEET 2 AA1 6 VAL A 122 GLU A 126 -1 O TYR A 124 N PHE A 40 SHEET 3 AA1 6 ASN A 78 ILE A 82 1 N ILE A 81 O THR A 123 SHEET 4 AA1 6 ASN A 55 LEU A 59 1 N ILE A 58 O SER A 80 SHEET 5 AA1 6 TYR A 171 SER A 174 1 O ILE A 173 N LEU A 57 SHEET 6 AA1 6 ILE A 378 ALA A 380 1 O PHE A 379 N LEU A 172 SHEET 1 AA2 2 TYR A 87 LEU A 89 0 SHEET 2 AA2 2 ILE A 108 PRO A 110 -1 O GLU A 109 N PHE A 88 SHEET 1 AA3 2 GLU A 128 ASN A 133 0 SHEET 2 AA3 2 THR A 138 LYS A 142 -1 O THR A 140 N SER A 131 SHEET 1 AA4 2 ALA A 178 PRO A 180 0 SHEET 2 AA4 2 ASN A 341 ALA A 343 -1 O LYS A 342 N GLU A 179 SHEET 1 AA5 4 LYS A 299 HIS A 301 0 SHEET 2 AA5 4 GLN A 267 VAL A 271 1 N LEU A 270 O LYS A 299 SHEET 3 AA5 4 SER A 230 VAL A 234 1 N ILE A 231 O HIS A 269 SHEET 4 AA5 4 THR A 334 TRP A 337 1 O ILE A 336 N VAL A 232 SHEET 1 AA6 3 THR A 304 GLU A 310 0 SHEET 2 AA6 3 GLN A 313 THR A 318 -1 O LEU A 315 N LYS A 308 SHEET 3 AA6 3 GLU A 328 PRO A 331 -1 O ILE A 330 N LEU A 314 SHEET 1 AA7 2 LEU A 364 ALA A 365 0 SHEET 2 AA7 2 ALA A 385 PHE A 386 1 O PHE A 386 N LEU A 364 SHEET 1 AA8 2 ALA A 446 TYR A 449 0 SHEET 2 AA8 2 ALA A 455 THR A 458 -1 O THR A 458 N ALA A 446 SHEET 1 AA9 6 PHE B 40 LYS B 41 0 SHEET 2 AA9 6 VAL B 122 TYR B 125 -1 O TYR B 124 N PHE B 40 SHEET 3 AA9 6 ASN B 78 ILE B 82 1 N ILE B 81 O THR B 123 SHEET 4 AA9 6 ASN B 55 LEU B 59 1 N ILE B 58 O ILE B 82 SHEET 5 AA9 6 TYR B 171 SER B 174 1 O ILE B 173 N LEU B 57 SHEET 6 AA9 6 ILE B 378 ALA B 380 1 O PHE B 379 N LEU B 172 SHEET 1 AB1 2 TYR B 87 LEU B 89 0 SHEET 2 AB1 2 ILE B 108 PRO B 110 -1 O GLU B 109 N PHE B 88 SHEET 1 AB2 2 ALA B 129 ASN B 133 0 SHEET 2 AB2 2 THR B 138 ILE B 141 -1 O THR B 138 N ASN B 133 SHEET 1 AB3 2 ALA B 178 PRO B 180 0 SHEET 2 AB3 2 ASN B 341 ALA B 343 -1 O LYS B 342 N GLU B 179 SHEET 1 AB4 4 LYS B 299 HIS B 301 0 SHEET 2 AB4 4 GLN B 267 VAL B 271 1 N LEU B 270 O HIS B 301 SHEET 3 AB4 4 SER B 230 VAL B 234 1 N ILE B 231 O GLN B 267 SHEET 4 AB4 4 THR B 334 TRP B 337 1 O ILE B 336 N VAL B 234 SHEET 1 AB5 3 THR B 304 VAL B 309 0 SHEET 2 AB5 3 GLN B 313 THR B 318 -1 O LEU B 315 N ALA B 307 SHEET 3 AB5 3 GLU B 328 PRO B 331 -1 O ILE B 330 N LEU B 314 SHEET 1 AB6 2 LEU B 364 ALA B 365 0 SHEET 2 AB6 2 ALA B 385 PHE B 386 1 O PHE B 386 N LEU B 364 SHEET 1 AB7 3 ALA B 446 TYR B 449 0 SHEET 2 AB7 3 ALA B 455 THR B 458 -1 O THR B 458 N ALA B 446 SHEET 3 AB7 3 THR B 468 GLY B 469 -1 O GLY B 469 N ALA B 457 LINK O LEU A 89 MG MG A 604 1555 1555 2.60 LINK O ALA A 175 MG MG A 603 1555 1555 2.28 LINK O ILE A 381 MG MG A 602 1555 1555 2.93 LINK O2P FAD A 601 MG MG A 602 1555 1555 2.03 LINK O1P FAD A 601 MG MG A 603 1555 1555 2.39 LINK O2A FAD A 601 MG MG A 605 1555 1555 2.49 LINK O3P FAD A 601 MG MG A 605 1555 1555 2.60 LINK O ALA B 175 MG MG B 603 1555 1555 2.27 LINK O2P FAD B 601 MG MG B 602 1555 1555 2.31 LINK O3P FAD B 601 MG MG B 602 1555 1555 2.99 LINK O5B FAD B 601 MG MG B 603 1555 1555 2.83 LINK O1P FAD B 601 MG MG B 603 1555 1555 2.41 LINK O1A FAD B 601 MG MG B 604 1555 1555 2.42 LINK O2A FAD B 601 MG MG B 605 1555 1555 2.18 LINK O3P FAD B 601 MG MG B 605 1555 1555 2.75 SITE 1 AC1 32 GLY A 60 SER A 61 GLY A 62 TRP A 63 SITE 2 AC1 32 GLY A 64 ILE A 82 SER A 83 PRO A 84 SITE 3 AC1 32 ARG A 85 THR A 91 PRO A 92 LEU A 94 SITE 4 AC1 32 ALA A 129 ALA A 175 VAL A 176 GLY A 177 SITE 5 AC1 32 LEU A 195 LYS A 196 THR A 239 ARG A 344 SITE 6 AC1 32 GLY A 382 ASP A 383 PRO A 391 THR A 392 SITE 7 AC1 32 ALA A 393 TYR A 482 MG A 602 MG A 603 SITE 8 AC1 32 MG A 604 MG A 605 8WF A 606 MES A 607 SITE 1 AC2 7 ALA A 175 GLY A 177 ILE A 381 GLY A 382 SITE 2 AC2 7 ASP A 383 ASN A 384 FAD A 601 SITE 1 AC3 5 GLY A 62 GLY A 64 ALA A 65 ALA A 175 SITE 2 AC3 5 FAD A 601 SITE 1 AC4 4 GLY A 62 ARG A 85 LEU A 89 FAD A 601 SITE 1 AC5 5 GLY A 177 ALA A 178 LYS A 196 ASP A 383 SITE 2 AC5 5 FAD A 601 SITE 1 AC6 3 GLN A 394 MET A 485 FAD A 601 SITE 1 AC7 7 PRO A 180 LEU A 195 PRO A 238 THR A 239 SITE 2 AC7 7 THR A 339 GLY A 340 FAD A 601 SITE 1 AC8 34 GLY B 60 SER B 61 GLY B 62 TRP B 63 SITE 2 AC8 34 GLY B 64 ILE B 82 SER B 83 PRO B 84 SITE 3 AC8 34 ARG B 85 THR B 91 PRO B 92 LEU B 94 SITE 4 AC8 34 PRO B 95 GLU B 128 ALA B 129 ALA B 175 SITE 5 AC8 34 VAL B 176 GLY B 177 LEU B 195 THR B 239 SITE 6 AC8 34 ARG B 344 GLY B 382 ASP B 383 PRO B 391 SITE 7 AC8 34 THR B 392 ALA B 393 GLN B 394 TYR B 482 SITE 8 AC8 34 MG B 602 MG B 603 MG B 604 MG B 605 SITE 9 AC8 34 8WF B 606 MES B 607 SITE 1 AC9 7 ALA B 175 VAL B 176 GLY B 177 ILE B 381 SITE 2 AC9 7 ASP B 383 ASN B 384 FAD B 601 SITE 1 AD1 5 GLY B 62 GLY B 64 ALA B 65 ALA B 175 SITE 2 AD1 5 FAD B 601 SITE 1 AD2 6 GLY B 62 TRP B 63 ARG B 85 LEU B 89 SITE 2 AD2 6 THR B 91 FAD B 601 SITE 1 AD3 5 GLY B 177 ALA B 178 LYS B 196 ASP B 383 SITE 2 AD3 5 FAD B 601 SITE 1 AD4 4 GLN B 394 LEU B 444 MET B 485 FAD B 601 SITE 1 AD5 7 LEU B 195 GLY B 237 PRO B 238 THR B 239 SITE 2 AD5 7 GLY B 340 ASN B 341 FAD B 601 CRYST1 69.854 115.795 166.499 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014316 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008636 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006006 0.00000