HEADER TRANSPORT PROTEIN 11-OCT-17 5YJZ TITLE THE NATIVE CRYSTAL STRUCTURE OF RV3197 FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MACROLIDE ANTIBIOTIC BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: RV3197; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-CODON PLUS (DE3) RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1 KEYWDS MYCOBACTERIAL TUBERCULOSIS, MACROLIDE ANTIBIOTIC BINDING PROTEIN, KEYWDS 2 NON-CANONICAL ABC PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Q.Q.ZHANG,Z.H.RAO REVDAT 3 27-MAR-24 5YJZ 1 REMARK REVDAT 2 21-NOV-18 5YJZ 1 JRNL REVDAT 1 07-FEB-18 5YJZ 0 JRNL AUTH Q.ZHANG,H.LIU,X.LIU,D.JIANG,B.ZHANG,H.TIAN,C.YANG, JRNL AUTH 2 L.W.GUDDAT,H.YANG,K.MI,Z.RAO JRNL TITL DISCOVERY OF THE FIRST MACROLIDE ANTIBIOTIC BINDING PROTEIN JRNL TITL 2 IN MYCOBACTERIUM TUBERCULOSIS: A NEW ANTIBIOTIC RESISTANCE JRNL TITL 3 DRUG TARGET. JRNL REF PROTEIN CELL V. 9 971 2018 JRNL REFN ESSN 1674-8018 JRNL PMID 29350349 JRNL DOI 10.1007/S13238-017-0502-7 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 37811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.3992 - 5.2011 0.99 2769 135 0.1913 0.2105 REMARK 3 2 5.2011 - 4.1303 1.00 2639 149 0.1563 0.1913 REMARK 3 3 4.1303 - 3.6088 1.00 2578 155 0.1512 0.1807 REMARK 3 4 3.6088 - 3.2791 1.00 2567 147 0.1740 0.1922 REMARK 3 5 3.2791 - 3.0442 1.00 2582 120 0.1890 0.1990 REMARK 3 6 3.0442 - 2.8648 1.00 2571 133 0.2049 0.2390 REMARK 3 7 2.8648 - 2.7214 1.00 2516 146 0.1936 0.2545 REMARK 3 8 2.7214 - 2.6029 1.00 2556 121 0.1863 0.2331 REMARK 3 9 2.6029 - 2.5028 1.00 2530 145 0.1829 0.2170 REMARK 3 10 2.5028 - 2.4164 1.00 2515 148 0.1766 0.2265 REMARK 3 11 2.4164 - 2.3409 1.00 2543 117 0.1802 0.2167 REMARK 3 12 2.3409 - 2.2740 1.00 2554 119 0.1712 0.2048 REMARK 3 13 2.2740 - 2.2141 1.00 2532 124 0.1747 0.2433 REMARK 3 14 2.2141 - 2.1601 0.98 2467 133 0.1652 0.1959 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3212 REMARK 3 ANGLE : 1.035 4348 REMARK 3 CHIRALITY : 0.040 483 REMARK 3 PLANARITY : 0.005 566 REMARK 3 DIHEDRAL : 13.729 1224 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 74.9316 -23.7694 9.2916 REMARK 3 T TENSOR REMARK 3 T11: 0.2368 T22: 0.0992 REMARK 3 T33: 0.1668 T12: -0.0174 REMARK 3 T13: 0.0440 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.0728 L22: 0.7106 REMARK 3 L33: 0.4202 L12: -0.0625 REMARK 3 L13: 0.2053 L23: -0.1233 REMARK 3 S TENSOR REMARK 3 S11: -0.0030 S12: -0.0319 S13: -0.0342 REMARK 3 S21: 0.0489 S22: 0.0226 S23: -0.0114 REMARK 3 S31: -0.2014 S32: 0.0200 S33: 0.0116 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YJZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1300005312. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00849 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37838 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 45.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : 0.27000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M LITHIUM SULFATE, 0.1 M TRIS (PH REMARK 280 8.5), 2% (W/V) PEG 400, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.80450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.80450 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.80450 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.80450 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 33.80450 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 33.80450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 36470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 99640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -388.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 93.64500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -162.19790 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 187.29000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 33.80450 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 187.29000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 33.80450 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 93.64500 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 -162.19790 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 33.80450 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ASP A 3 REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 VAL A 6 REMARK 465 SER A 7 REMARK 465 ASP A 8 REMARK 465 ILE A 9 REMARK 465 LYS A 10 REMARK 465 ARG A 11 REMARK 465 GLY A 12 REMARK 465 ARG A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 ARG A 16 REMARK 465 ASN A 17 REMARK 465 ALA A 18 REMARK 465 LYS A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 SER A 22 REMARK 465 ILE A 23 REMARK 465 PRO A 24 REMARK 465 VAL A 25 REMARK 465 GLY A 26 REMARK 465 PHE A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 ARG A 30 REMARK 465 ALA A 31 REMARK 465 ALA A 32 REMARK 465 LEU A 33 REMARK 465 GLY A 34 REMARK 465 LEU A 35 REMARK 465 GLY A 36 REMARK 465 LYS A 37 REMARK 465 ARG A 38 REMARK 465 LEU A 39 REMARK 465 THR A 40 REMARK 465 GLY A 41 REMARK 465 LYS A 42 REMARK 465 ASP A 443 REMARK 465 ALA A 444 REMARK 465 ILE A 445 REMARK 465 VAL A 446 REMARK 465 VAL A 447 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 866 O HOH A 881 2.11 REMARK 500 O HOH A 705 O HOH A 717 2.17 REMARK 500 O HOH A 661 O HOH A 869 2.17 REMARK 500 O HOH A 878 O HOH A 937 2.17 REMARK 500 O HOH A 870 O HOH A 909 2.18 REMARK 500 O HOH A 862 O HOH A 897 2.19 REMARK 500 O HOH A 857 O HOH A 887 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 938 DISTANCE = 6.15 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 507 DBREF 5YJZ A 1 447 UNP O53343 O53343_MYCTU 1 447 SEQADV 5YJZ GLY A -4 UNP O53343 EXPRESSION TAG SEQADV 5YJZ PRO A -3 UNP O53343 EXPRESSION TAG SEQADV 5YJZ LEU A -2 UNP O53343 EXPRESSION TAG SEQADV 5YJZ GLY A -1 UNP O53343 EXPRESSION TAG SEQADV 5YJZ SER A 0 UNP O53343 EXPRESSION TAG SEQRES 1 A 452 GLY PRO LEU GLY SER MET ASP ASP GLY SER VAL SER ASP SEQRES 2 A 452 ILE LYS ARG GLY ARG ALA ALA ARG ASN ALA LYS LEU ALA SEQRES 3 A 452 SER ILE PRO VAL GLY PHE ALA GLY ARG ALA ALA LEU GLY SEQRES 4 A 452 LEU GLY LYS ARG LEU THR GLY LYS SER LYS ASP GLU VAL SEQRES 5 A 452 THR ALA GLU LEU MET GLU LYS ALA ALA ASN GLN LEU PHE SEQRES 6 A 452 THR VAL LEU GLY GLU LEU LYS GLY GLY ALA MET LYS VAL SEQRES 7 A 452 GLY GLN ALA LEU SER VAL MET GLU ALA ALA ILE PRO ASP SEQRES 8 A 452 GLU PHE GLY GLU PRO TYR ARG GLU ALA LEU THR LYS LEU SEQRES 9 A 452 GLN LYS ASP ALA PRO PRO LEU PRO ALA SER LYS VAL HIS SEQRES 10 A 452 ARG VAL LEU ASP GLY GLN LEU GLY THR LYS TRP ARG GLU SEQRES 11 A 452 ARG PHE SER SER PHE ASN ASP THR PRO VAL ALA SER ALA SEQRES 12 A 452 SER ILE GLY GLN VAL HIS LYS ALA ILE TRP SER ASP GLY SEQRES 13 A 452 ARG GLU VAL ALA VAL LYS ILE GLN TYR PRO GLY ALA ASP SEQRES 14 A 452 GLU ALA LEU ARG ALA ASP LEU LYS THR MET GLN ARG MET SEQRES 15 A 452 VAL GLY VAL LEU LYS GLN LEU SER PRO GLY ALA ASP VAL SEQRES 16 A 452 GLN GLY VAL VAL ASP GLU LEU VAL GLU ARG THR GLU MET SEQRES 17 A 452 GLU LEU ASP TYR ARG LEU GLU ALA ALA ASN GLN ARG ALA SEQRES 18 A 452 PHE ALA LYS ALA TYR HIS ASP HIS PRO ARG PHE GLN VAL SEQRES 19 A 452 PRO HIS VAL VAL ALA SER ALA PRO LYS VAL VAL ILE GLN SEQRES 20 A 452 GLU TRP ILE GLU GLY VAL PRO MET ALA GLU ILE ILE ARG SEQRES 21 A 452 HIS GLY THR THR GLU GLN ARG ASP LEU ILE GLY THR LEU SEQRES 22 A 452 LEU ALA GLU LEU THR PHE ASP ALA PRO ARG ARG LEU GLY SEQRES 23 A 452 LEU MET HIS GLY ASP ALA HIS PRO GLY ASN PHE MET LEU SEQRES 24 A 452 LEU PRO ASP GLY ARG MET GLY ILE ILE ASP PHE GLY ALA SEQRES 25 A 452 VAL ALA PRO MET PRO GLY GLY PHE PRO ILE GLU LEU GLY SEQRES 26 A 452 MET THR ILE ARG LEU ALA ARG GLU LYS ASN TYR ASP LEU SEQRES 27 A 452 LEU LEU PRO THR MET GLU LYS ALA GLY LEU ILE GLN ARG SEQRES 28 A 452 GLY ARG GLN VAL SER VAL ARG GLU ILE ASP GLU MET LEU SEQRES 29 A 452 ARG GLN TYR VAL GLU PRO ILE GLN VAL GLU VAL PHE HIS SEQRES 30 A 452 TYR THR ARG LYS TRP LEU GLN LYS MET THR VAL SER GLN SEQRES 31 A 452 ILE ASP ARG SER VAL ALA GLN ILE ARG THR ALA ARG GLN SEQRES 32 A 452 MET ASP LEU PRO ALA LYS LEU ALA ILE PRO MET ARG VAL SEQRES 33 A 452 ILE ALA SER VAL GLY ALA ILE LEU CYS GLN LEU ASP ALA SEQRES 34 A 452 HIS VAL PRO ILE LYS ALA LEU SER GLU GLU LEU ILE PRO SEQRES 35 A 452 GLY PHE ALA GLU PRO ASP ALA ILE VAL VAL HET GOL A 501 6 HET GOL A 502 6 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 A 506 5 HET SO4 A 507 5 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 SO4 5(O4 S 2-) FORMUL 9 HOH *336(H2 O) HELIX 1 AA1 SER A 43 GLY A 68 1 26 HELIX 2 AA2 LYS A 72 ILE A 84 1 13 HELIX 3 AA3 PRO A 85 GLU A 87 5 3 HELIX 4 AA4 PHE A 88 LYS A 101 1 14 HELIX 5 AA5 PRO A 107 GLY A 120 1 14 HELIX 6 AA6 LYS A 122 GLU A 125 5 4 HELIX 7 AA7 GLY A 162 SER A 185 1 24 HELIX 8 AA8 GLY A 192 ASP A 206 1 15 HELIX 9 AA9 TYR A 207 TYR A 221 1 15 HELIX 10 AB1 MET A 250 GLY A 257 1 8 HELIX 11 AB2 THR A 258 GLY A 281 1 24 HELIX 12 AB3 HIS A 288 GLY A 290 5 3 HELIX 13 AB4 PRO A 316 GLU A 328 1 13 HELIX 14 AB5 ASN A 330 GLY A 342 1 13 HELIX 15 AB6 SER A 351 GLU A 364 1 14 HELIX 16 AB7 PRO A 365 VAL A 368 5 4 HELIX 17 AB8 THR A 374 THR A 382 1 9 HELIX 18 AB9 PRO A 402 ASP A 423 1 22 HELIX 19 AC1 PRO A 427 ILE A 436 1 10 SHEET 1 AA1 3 PHE A 127 PHE A 130 0 SHEET 2 AA1 3 GLY A 141 TRP A 148 -1 O ILE A 147 N SER A 128 SHEET 3 AA1 3 ALA A 136 ALA A 138 -1 N ALA A 138 O GLY A 141 SHEET 1 AA2 5 PHE A 127 PHE A 130 0 SHEET 2 AA2 5 GLY A 141 TRP A 148 -1 O ILE A 147 N SER A 128 SHEET 3 AA2 5 GLU A 153 GLN A 159 -1 O ILE A 158 N GLN A 142 SHEET 4 AA2 5 VAL A 239 GLU A 243 -1 O VAL A 240 N LYS A 157 SHEET 5 AA2 5 VAL A 232 SER A 235 -1 N ALA A 234 O ILE A 241 SHEET 1 AA3 4 PHE A 227 GLN A 228 0 SHEET 2 AA3 4 MET A 300 ILE A 302 1 O MET A 300 N GLN A 228 SHEET 3 AA3 4 PHE A 292 LEU A 294 -1 N MET A 293 O GLY A 301 SHEET 4 AA3 4 VAL A 248 PRO A 249 -1 N VAL A 248 O LEU A 294 SHEET 1 AA4 2 LEU A 282 MET A 283 0 SHEET 2 AA4 2 ALA A 309 PRO A 310 -1 O ALA A 309 N MET A 283 SHEET 1 AA5 2 PHE A 371 HIS A 372 0 SHEET 2 AA5 2 HIS A 425 VAL A 426 -1 O VAL A 426 N PHE A 371 CISPEP 1 PRO A 104 PRO A 105 0 -0.08 SITE 1 AC1 5 ARG A 126 ARG A 215 ALA A 234 SER A 235 SITE 2 AC1 5 HOH A 702 SITE 1 AC2 5 PRO A 277 ARG A 278 LEU A 280 GLY A 281 SITE 2 AC2 5 GLY A 313 SITE 1 AC3 4 ARG A 126 TRP A 148 HOH A 617 HOH A 702 SITE 1 AC4 4 GLN A 345 ARG A 346 GLN A 398 HOH A 816 SITE 1 AC5 4 GLN A 191 GLY A 192 ARG A 388 HOH A 637 SITE 1 AC6 2 ARG A 113 HOH A 827 SITE 1 AC7 1 ARG A 208 CRYST1 187.290 187.290 67.609 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005339 0.003083 0.000000 0.00000 SCALE2 0.000000 0.006165 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014791 0.00000