HEADER TRANSPORT PROTEIN 11-OCT-17 5YK0 TITLE THE COMPLEX STRUCTURE OF RV3197-ADP FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MACROLIDE ANTIBIOTIC BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: RV3197; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-CODON PLUS (DE3) RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS MYCOBACTERIUM TUBERCULOSIS, MACROLIDE ANTIBIOTIC BINDING PROTEIN, KEYWDS 2 NON-CANONICAL ABC PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.H.RAO,Q.Q.ZHANG REVDAT 3 22-NOV-23 5YK0 1 REMARK REVDAT 2 21-NOV-18 5YK0 1 JRNL REVDAT 1 07-FEB-18 5YK0 0 JRNL AUTH Q.ZHANG,H.LIU,X.LIU,D.JIANG,B.ZHANG,H.TIAN,C.YANG, JRNL AUTH 2 L.W.GUDDAT,H.YANG,K.MI,Z.RAO JRNL TITL DISCOVERY OF THE FIRST MACROLIDE ANTIBIOTIC BINDING PROTEIN JRNL TITL 2 IN MYCOBACTERIUM TUBERCULOSIS: A NEW ANTIBIOTIC RESISTANCE JRNL TITL 3 DRUG TARGET. JRNL REF PROTEIN CELL V. 9 971 2018 JRNL REFN ESSN 1674-8018 JRNL PMID 29350349 JRNL DOI 10.1007/S13238-017-0502-7 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 40423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2031 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.2837 - 5.1819 0.98 2778 123 0.1950 0.1822 REMARK 3 2 5.1819 - 4.1139 1.00 2672 126 0.1595 0.2243 REMARK 3 3 4.1139 - 3.5942 1.00 2577 161 0.1614 0.2082 REMARK 3 4 3.5942 - 3.2656 1.00 2600 144 0.1902 0.2298 REMARK 3 5 3.2656 - 3.0316 1.00 2555 147 0.1939 0.2441 REMARK 3 6 3.0316 - 2.8529 1.00 2570 137 0.2118 0.2240 REMARK 3 7 2.8529 - 2.7101 1.00 2545 136 0.2055 0.2608 REMARK 3 8 2.7101 - 2.5921 1.00 2544 148 0.2076 0.2455 REMARK 3 9 2.5921 - 2.4923 1.00 2541 136 0.2024 0.2452 REMARK 3 10 2.4923 - 2.4063 1.00 2563 117 0.2023 0.2455 REMARK 3 11 2.4063 - 2.3311 1.00 2543 127 0.2076 0.2809 REMARK 3 12 2.3311 - 2.2645 1.00 2565 118 0.2097 0.2744 REMARK 3 13 2.2645 - 2.2048 1.00 2529 134 0.2079 0.2445 REMARK 3 14 2.2048 - 2.1511 0.99 2475 158 0.2063 0.2032 REMARK 3 15 2.1511 - 2.1022 0.93 2335 119 0.2095 0.2420 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3229 REMARK 3 ANGLE : 0.868 4377 REMARK 3 CHIRALITY : 0.031 485 REMARK 3 PLANARITY : 0.004 564 REMARK 3 DIHEDRAL : 14.660 1222 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -74.8595 23.5845 9.1689 REMARK 3 T TENSOR REMARK 3 T11: 0.2601 T22: 0.1382 REMARK 3 T33: 0.2170 T12: -0.0074 REMARK 3 T13: -0.0708 T23: -0.0771 REMARK 3 L TENSOR REMARK 3 L11: 0.1194 L22: 0.4549 REMARK 3 L33: 0.2577 L12: 0.0422 REMARK 3 L13: -0.1503 L23: 0.1209 REMARK 3 S TENSOR REMARK 3 S11: -0.0393 S12: -0.0255 S13: 0.0548 REMARK 3 S21: 0.0379 S22: 0.0465 S23: -0.0281 REMARK 3 S31: 0.1100 S32: 0.0059 S33: 0.0247 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YK0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1300005376. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97906 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40630 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.40 REMARK 200 R MERGE FOR SHELL (I) : 0.69900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5YJZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M LITHIUM SULFATE, 0.1M TRIS (PH REMARK 280 8.5), 2% (W/V) PEG 400, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.64300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.64300 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.64300 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.64300 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 33.64300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 33.64300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 46300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 98520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -599.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -93.48150 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 161.91471 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -186.96300 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 33.64300 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -186.96300 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 33.64300 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 -93.48150 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 161.91471 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 33.64300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ASP A 3 REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 VAL A 6 REMARK 465 SER A 7 REMARK 465 ASP A 8 REMARK 465 ILE A 9 REMARK 465 LYS A 10 REMARK 465 ARG A 11 REMARK 465 GLY A 12 REMARK 465 ARG A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 ARG A 16 REMARK 465 ASN A 17 REMARK 465 ALA A 18 REMARK 465 LYS A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 SER A 22 REMARK 465 ILE A 23 REMARK 465 PRO A 24 REMARK 465 VAL A 25 REMARK 465 GLY A 26 REMARK 465 PHE A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 ARG A 30 REMARK 465 ALA A 31 REMARK 465 ALA A 32 REMARK 465 LEU A 33 REMARK 465 GLY A 34 REMARK 465 LEU A 35 REMARK 465 GLY A 36 REMARK 465 LYS A 37 REMARK 465 ARG A 38 REMARK 465 LEU A 39 REMARK 465 THR A 40 REMARK 465 GLY A 41 REMARK 465 LYS A 42 REMARK 465 SER A 43 REMARK 465 LYS A 44 REMARK 465 ALA A 444 REMARK 465 ILE A 445 REMARK 465 VAL A 446 REMARK 465 VAL A 447 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 105 C - N - CD ANGL. DEV. = 12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 939 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 940 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A 941 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH A 942 DISTANCE = 6.85 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 510 DBREF 5YK0 A 1 447 UNP O53343 O53343_MYCTU 1 447 SEQADV 5YK0 GLY A -4 UNP O53343 EXPRESSION TAG SEQADV 5YK0 PRO A -3 UNP O53343 EXPRESSION TAG SEQADV 5YK0 LEU A -2 UNP O53343 EXPRESSION TAG SEQADV 5YK0 GLY A -1 UNP O53343 EXPRESSION TAG SEQADV 5YK0 SER A 0 UNP O53343 EXPRESSION TAG SEQRES 1 A 452 GLY PRO LEU GLY SER MET ASP ASP GLY SER VAL SER ASP SEQRES 2 A 452 ILE LYS ARG GLY ARG ALA ALA ARG ASN ALA LYS LEU ALA SEQRES 3 A 452 SER ILE PRO VAL GLY PHE ALA GLY ARG ALA ALA LEU GLY SEQRES 4 A 452 LEU GLY LYS ARG LEU THR GLY LYS SER LYS ASP GLU VAL SEQRES 5 A 452 THR ALA GLU LEU MET GLU LYS ALA ALA ASN GLN LEU PHE SEQRES 6 A 452 THR VAL LEU GLY GLU LEU LYS GLY GLY ALA MET LYS VAL SEQRES 7 A 452 GLY GLN ALA LEU SER VAL MET GLU ALA ALA ILE PRO ASP SEQRES 8 A 452 GLU PHE GLY GLU PRO TYR ARG GLU ALA LEU THR LYS LEU SEQRES 9 A 452 GLN LYS ASP ALA PRO PRO LEU PRO ALA SER LYS VAL HIS SEQRES 10 A 452 ARG VAL LEU ASP GLY GLN LEU GLY THR LYS TRP ARG GLU SEQRES 11 A 452 ARG PHE SER SER PHE ASN ASP THR PRO VAL ALA SER ALA SEQRES 12 A 452 SER ILE GLY GLN VAL HIS LYS ALA ILE TRP SER ASP GLY SEQRES 13 A 452 ARG GLU VAL ALA VAL LYS ILE GLN TYR PRO GLY ALA ASP SEQRES 14 A 452 GLU ALA LEU ARG ALA ASP LEU LYS THR MET GLN ARG MET SEQRES 15 A 452 VAL GLY VAL LEU LYS GLN LEU SER PRO GLY ALA ASP VAL SEQRES 16 A 452 GLN GLY VAL VAL ASP GLU LEU VAL GLU ARG THR GLU MET SEQRES 17 A 452 GLU LEU ASP TYR ARG LEU GLU ALA ALA ASN GLN ARG ALA SEQRES 18 A 452 PHE ALA LYS ALA TYR HIS ASP HIS PRO ARG PHE GLN VAL SEQRES 19 A 452 PRO HIS VAL VAL ALA SER ALA PRO LYS VAL VAL ILE GLN SEQRES 20 A 452 GLU TRP ILE GLU GLY VAL PRO MET ALA GLU ILE ILE ARG SEQRES 21 A 452 HIS GLY THR THR GLU GLN ARG ASP LEU ILE GLY THR LEU SEQRES 22 A 452 LEU ALA GLU LEU THR PHE ASP ALA PRO ARG ARG LEU GLY SEQRES 23 A 452 LEU MET HIS GLY ASP ALA HIS PRO GLY ASN PHE MET LEU SEQRES 24 A 452 LEU PRO ASP GLY ARG MET GLY ILE ILE ASP PHE GLY ALA SEQRES 25 A 452 VAL ALA PRO MET PRO GLY GLY PHE PRO ILE GLU LEU GLY SEQRES 26 A 452 MET THR ILE ARG LEU ALA ARG GLU LYS ASN TYR ASP LEU SEQRES 27 A 452 LEU LEU PRO THR MET GLU LYS ALA GLY LEU ILE GLN ARG SEQRES 28 A 452 GLY ARG GLN VAL SER VAL ARG GLU ILE ASP GLU MET LEU SEQRES 29 A 452 ARG GLN TYR VAL GLU PRO ILE GLN VAL GLU VAL PHE HIS SEQRES 30 A 452 TYR THR ARG LYS TRP LEU GLN LYS MET THR VAL SER GLN SEQRES 31 A 452 ILE ASP ARG SER VAL ALA GLN ILE ARG THR ALA ARG GLN SEQRES 32 A 452 MET ASP LEU PRO ALA LYS LEU ALA ILE PRO MET ARG VAL SEQRES 33 A 452 ILE ALA SER VAL GLY ALA ILE LEU CYS GLN LEU ASP ALA SEQRES 34 A 452 HIS VAL PRO ILE LYS ALA LEU SER GLU GLU LEU ILE PRO SEQRES 35 A 452 GLY PHE ALA GLU PRO ASP ALA ILE VAL VAL HET ADP A 501 27 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 A 506 5 HET SO4 A 507 5 HET GOL A 508 6 HET GOL A 509 6 HET GOL A 510 6 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 SO4 6(O4 S 2-) FORMUL 9 GOL 3(C3 H8 O3) FORMUL 12 HOH *341(H2 O) HELIX 1 AA1 ASP A 45 GLY A 68 1 24 HELIX 2 AA2 LYS A 72 ILE A 84 1 13 HELIX 3 AA3 PRO A 85 GLU A 87 5 3 HELIX 4 AA4 PHE A 88 THR A 97 1 10 HELIX 5 AA5 PRO A 107 GLY A 120 1 14 HELIX 6 AA6 LYS A 122 GLU A 125 5 4 HELIX 7 AA7 GLY A 162 SER A 185 1 24 HELIX 8 AA8 GLY A 192 ASP A 206 1 15 HELIX 9 AA9 TYR A 207 TYR A 221 1 15 HELIX 10 AB1 MET A 250 GLY A 257 1 8 HELIX 11 AB2 THR A 258 GLY A 281 1 24 HELIX 12 AB3 HIS A 288 GLY A 290 5 3 HELIX 13 AB4 PRO A 316 GLU A 328 1 13 HELIX 14 AB5 ASN A 330 GLY A 342 1 13 HELIX 15 AB6 SER A 351 GLU A 364 1 14 HELIX 16 AB7 PRO A 365 VAL A 368 5 4 HELIX 17 AB8 THR A 374 MET A 381 1 8 HELIX 18 AB9 PRO A 402 ASP A 423 1 22 HELIX 19 AC1 PRO A 427 ILE A 436 1 10 SHEET 1 AA1 3 PHE A 127 PHE A 130 0 SHEET 2 AA1 3 GLY A 141 TRP A 148 -1 O ILE A 147 N SER A 128 SHEET 3 AA1 3 ALA A 136 ALA A 138 -1 N ALA A 138 O GLY A 141 SHEET 1 AA2 5 PHE A 127 PHE A 130 0 SHEET 2 AA2 5 GLY A 141 TRP A 148 -1 O ILE A 147 N SER A 128 SHEET 3 AA2 5 GLU A 153 GLN A 159 -1 O ILE A 158 N GLN A 142 SHEET 4 AA2 5 VAL A 239 GLU A 243 -1 O VAL A 240 N LYS A 157 SHEET 5 AA2 5 VAL A 232 SER A 235 -1 N ALA A 234 O ILE A 241 SHEET 1 AA3 4 PHE A 227 GLN A 228 0 SHEET 2 AA3 4 MET A 300 ILE A 302 1 O MET A 300 N GLN A 228 SHEET 3 AA3 4 PHE A 292 LEU A 294 -1 N MET A 293 O GLY A 301 SHEET 4 AA3 4 VAL A 248 PRO A 249 -1 N VAL A 248 O LEU A 294 SHEET 1 AA4 2 LEU A 282 MET A 283 0 SHEET 2 AA4 2 ALA A 309 PRO A 310 -1 O ALA A 309 N MET A 283 SHEET 1 AA5 2 PHE A 371 HIS A 372 0 SHEET 2 AA5 2 HIS A 425 VAL A 426 -1 O VAL A 426 N PHE A 371 SITE 1 AC1 16 SER A 137 ALA A 138 SER A 139 VAL A 143 SITE 2 AC1 16 ALA A 155 LYS A 157 GLN A 242 GLU A 243 SITE 3 AC1 16 TRP A 244 ILE A 245 ASP A 304 HOH A 603 SITE 4 AC1 16 HOH A 605 HOH A 675 HOH A 717 HOH A 791 SITE 1 AC2 3 GLN A 345 ARG A 346 GLN A 398 SITE 1 AC3 3 ARG A 126 TRP A 148 HOH A 611 SITE 1 AC4 4 ARG A 279 HOH A 619 HOH A 726 HOH A 780 SITE 1 AC5 8 VAL A 190 GLN A 191 GLY A 192 ASP A 195 SITE 2 AC5 8 ARG A 388 HOH A 674 HOH A 707 HOH A 807 SITE 1 AC6 3 LYS A 98 ARG A 113 HOH A 804 SITE 1 AC7 1 ARG A 208 SITE 1 AC8 4 ARG A 126 ARG A 215 ALA A 234 SER A 235 SITE 1 AC9 4 PRO A 277 ARG A 278 GLY A 281 PRO A 312 SITE 1 AD1 6 ASP A 263 LEU A 264 THR A 267 HIS A 425 SITE 2 AD1 6 HOH A 601 HOH A 784 CRYST1 186.963 186.963 67.286 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005349 0.003088 0.000000 0.00000 SCALE2 0.000000 0.006176 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014862 0.00000