HEADER VIRAL PROTEIN 22-OCT-17 5YMS TITLE STRUCTURAL BASIS OF GLYCAN SPECIFICITY AND IDENTIFICATION OF A NOVEL TITLE 2 GLYCAN BINDING CAVITY IN HUMAN P[19] ROTAVIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER CAPSID PROTEIN VP4; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 SYNONYM: ROTAVIRUS VP8* PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: P[19] VP8* AND LNT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ROTAVIRUS A; SOURCE 3 ORGANISM_TAXID: 10941; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI-PICHIA PASTORIS SHUTTLE VECTOR SOURCE 5 PPPARG4; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 1182032 KEYWDS P[19] ROTAVIRUS, P[6] ROTAVIRUS, VP8*, MUCIN CORE2CORE 2, LACTO-N- KEYWDS 2 TETRAROSETETRAOSE (LNT), VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.SUN,L.DANDI,Z.DUAN REVDAT 5 22-NOV-23 5YMS 1 HETSYN LINK REVDAT 4 29-JUL-20 5YMS 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 11-JUL-18 5YMS 1 JRNL REVDAT 2 23-MAY-18 5YMS 1 JRNL REVDAT 1 02-MAY-18 5YMS 0 JRNL AUTH X.SUN,D.LI,J.QI,W.CHAI,L.WANG,L.WANG,R.PENG,H.WANG,Q.ZHANG, JRNL AUTH 2 L.PANG,X.KONG,H.WANG,M.JIN,G.F.GAO,Z.DUAN JRNL TITL GLYCAN BINDING SPECIFICITY AND MECHANISM OF HUMAN AND JRNL TITL 2 PORCINE P[6]/P[19] ROTAVIRUS VP8*S. JRNL REF J. VIROL. V. 92 2018 JRNL REFN ESSN 1098-5514 JRNL PMID 29720519 JRNL DOI 10.1128/JVI.00538-18 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 98627 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 4951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 1.2954 52.4932 112.9311 REMARK 3 T TENSOR REMARK 3 T11: 0.1751 T22: 0.1055 REMARK 3 T33: 0.1540 T12: -0.0354 REMARK 3 T13: 0.0264 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.5402 L22: 0.7839 REMARK 3 L33: 1.1698 L12: -0.1851 REMARK 3 L13: 0.1344 L23: -0.1191 REMARK 3 S TENSOR REMARK 3 S11: -0.0333 S12: 0.0625 S13: 0.0088 REMARK 3 S21: 0.0386 S22: -0.0030 S23: 0.0146 REMARK 3 S31: -0.1270 S32: 0.0884 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -17.7366 15.6814 103.4046 REMARK 3 T TENSOR REMARK 3 T11: 0.1619 T22: 0.1162 REMARK 3 T33: 0.1505 T12: -0.0011 REMARK 3 T13: 0.0081 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 0.9438 L22: 0.7255 REMARK 3 L33: 0.6630 L12: -0.1297 REMARK 3 L13: -0.4759 L23: -0.1234 REMARK 3 S TENSOR REMARK 3 S11: -0.0471 S12: 0.0923 S13: -0.1275 REMARK 3 S21: 0.0446 S22: -0.0022 S23: 0.0240 REMARK 3 S31: 0.0385 S32: 0.0117 S33: -0.0011 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 4.7460 33.3645 130.7461 REMARK 3 T TENSOR REMARK 3 T11: 0.2024 T22: 0.1432 REMARK 3 T33: 0.1390 T12: 0.0102 REMARK 3 T13: -0.0103 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.9786 L22: 0.9135 REMARK 3 L33: 0.9334 L12: 0.1768 REMARK 3 L13: -0.0145 L23: -0.0214 REMARK 3 S TENSOR REMARK 3 S11: 0.0788 S12: -0.0267 S13: -0.0090 REMARK 3 S21: 0.1715 S22: -0.0210 S23: -0.0142 REMARK 3 S31: 0.0469 S32: 0.1147 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): -37.5737 15.2658 146.5661 REMARK 3 T TENSOR REMARK 3 T11: 0.1576 T22: 0.2621 REMARK 3 T33: 0.1693 T12: -0.0066 REMARK 3 T13: 0.0099 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 1.2560 L22: 1.5043 REMARK 3 L33: 1.4321 L12: -0.0124 REMARK 3 L13: -0.4967 L23: -0.3359 REMARK 3 S TENSOR REMARK 3 S11: -0.0421 S12: -0.0496 S13: 0.0532 REMARK 3 S21: -0.0395 S22: -0.0103 S23: -0.1258 REMARK 3 S31: 0.0620 S32: 0.2246 S33: -0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN E REMARK 3 ORIGIN FOR THE GROUP (A): -20.4185 53.0988 155.1541 REMARK 3 T TENSOR REMARK 3 T11: 0.1932 T22: 0.2408 REMARK 3 T33: 0.1117 T12: -0.0483 REMARK 3 T13: -0.0019 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 0.8380 L22: 1.5990 REMARK 3 L33: 1.5263 L12: -0.0413 REMARK 3 L13: 0.1101 L23: 0.0237 REMARK 3 S TENSOR REMARK 3 S11: 0.0467 S12: 0.1216 S13: -0.0424 REMARK 3 S21: -0.1913 S22: 0.0351 S23: -0.0072 REMARK 3 S31: -0.0064 S32: -0.0963 S33: 0.0025 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN F REMARK 3 ORIGIN FOR THE GROUP (A): -55.8063 33.7521 144.2389 REMARK 3 T TENSOR REMARK 3 T11: 0.1787 T22: 0.2433 REMARK 3 T33: 0.2993 T12: -0.0311 REMARK 3 T13: -0.0206 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 1.1568 L22: 1.0241 REMARK 3 L33: 1.0595 L12: -0.5155 REMARK 3 L13: -0.1897 L23: -0.0199 REMARK 3 S TENSOR REMARK 3 S11: -0.0147 S12: -0.1422 S13: 0.2624 REMARK 3 S21: 0.0727 S22: 0.0043 S23: 0.0490 REMARK 3 S31: -0.0920 S32: 0.0138 S33: 0.0002 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN G REMARK 3 ORIGIN FOR THE GROUP (A): -33.9917 34.6839 111.7586 REMARK 3 T TENSOR REMARK 3 T11: 0.1200 T22: 0.1217 REMARK 3 T33: 0.1826 T12: 0.0136 REMARK 3 T13: 0.0170 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.9460 L22: 0.7405 REMARK 3 L33: 0.8868 L12: 0.1792 REMARK 3 L13: -0.0638 L23: -0.0048 REMARK 3 S TENSOR REMARK 3 S11: 0.0183 S12: 0.0317 S13: 0.0562 REMARK 3 S21: 0.0475 S22: -0.0065 S23: 0.0991 REMARK 3 S31: -0.0562 S32: -0.0255 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN H REMARK 3 ORIGIN FOR THE GROUP (A): -7.5126 34.4833 168.0752 REMARK 3 T TENSOR REMARK 3 T11: 0.2735 T22: 0.2821 REMARK 3 T33: 0.2633 T12: -0.0614 REMARK 3 T13: -0.0960 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.9452 L22: 1.2581 REMARK 3 L33: 1.3587 L12: -0.6100 REMARK 3 L13: 0.1527 L23: -0.2671 REMARK 3 S TENSOR REMARK 3 S11: 0.1243 S12: -0.1422 S13: -0.2158 REMARK 3 S21: 0.0172 S22: 0.0494 S23: -0.1613 REMARK 3 S31: 0.2178 S32: -0.0629 S33: 0.0169 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YMS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1300005506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 123 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104019 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5750 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5GJ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M MES PH REMARK 280 6.5, 30% W/V POLYETHYLENE GLYCOL MME 5000, PH 8.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 89.88800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.67300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 89.88800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 64.67300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 0 REMARK 465 MET D 0 REMARK 465 MET E 0 REMARK 465 MET F 0 REMARK 465 MET H 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH E 779 O HOH H 750 1.81 REMARK 500 OE2 GLU G 31 O HOH G 701 1.84 REMARK 500 O HOH G 817 O HOH G 827 1.84 REMARK 500 O HOH B 841 O HOH B 842 1.85 REMARK 500 O HOH G 851 O HOH G 852 1.87 REMARK 500 O HOH G 759 O HOH G 834 1.90 REMARK 500 O HOH B 817 O HOH B 833 1.92 REMARK 500 NH2 ARG E 109 O HOH E 701 1.92 REMARK 500 OD1 ASN E 62 O HOH E 702 1.96 REMARK 500 O HOH D 779 O HOH D 795 1.96 REMARK 500 O HOH D 727 O HOH D 804 1.97 REMARK 500 O HOH G 801 O HOH G 810 1.97 REMARK 500 O HOH A 808 O HOH A 816 1.99 REMARK 500 O HOH G 767 O HOH G 820 1.99 REMARK 500 O HOH B 821 O HOH B 833 2.00 REMARK 500 O HOH G 776 O HOH G 815 2.00 REMARK 500 O HOH A 820 O HOH A 829 2.00 REMARK 500 OXT LEU A 160 O HOH A 701 2.01 REMARK 500 O HOH A 813 O HOH C 795 2.01 REMARK 500 O HOH A 744 O HOH A 829 2.02 REMARK 500 ND2 ASN E 24 O HOH E 703 2.02 REMARK 500 OD1 ASN D 62 O HOH D 701 2.02 REMARK 500 O HOH D 822 O HOH D 823 2.03 REMARK 500 O HOH B 751 O HOH B 828 2.03 REMARK 500 O HOH H 746 O HOH H 751 2.03 REMARK 500 OE2 GLU C 31 O HOH C 701 2.03 REMARK 500 O HOH B 795 O HOH B 820 2.04 REMARK 500 OE1 GLU G 132 O HOH G 702 2.05 REMARK 500 OD1 ASN A 85 O HOH A 702 2.05 REMARK 500 OG SER F 147 O HOH F 701 2.06 REMARK 500 O HOH B 702 O HOH B 713 2.06 REMARK 500 O HOH C 737 O HOH C 838 2.07 REMARK 500 O HOH D 774 O HOH D 813 2.08 REMARK 500 O HOH G 817 O HOH G 841 2.09 REMARK 500 O HOH D 798 O HOH F 753 2.09 REMARK 500 O HOH A 812 O HOH A 846 2.10 REMARK 500 O HOH A 779 O HOH A 836 2.10 REMARK 500 O ASN E 48 O HOH E 704 2.12 REMARK 500 OD1 ASN H 35 O HOH H 701 2.12 REMARK 500 O HOH G 850 O HOH G 852 2.12 REMARK 500 O HOH C 836 O HOH C 845 2.12 REMARK 500 ND2 ASN B 22 O HOH B 701 2.12 REMARK 500 O HOH B 838 O HOH C 837 2.16 REMARK 500 O HOH B 814 O HOH B 824 2.16 REMARK 500 O HOH A 704 O HOH C 762 2.16 REMARK 500 O HOH A 836 O HOH A 849 2.17 REMARK 500 O HOH D 729 O HOH D 807 2.17 REMARK 500 O HOH C 792 O HOH C 806 2.18 REMARK 500 ND2 ASN B 72 O THR G 70 2.18 REMARK 500 O HOH G 807 O HOH G 845 2.19 REMARK 500 REMARK 500 THIS ENTRY HAS 51 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH F 790 O HOH G 835 2558 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 140 CB GLU B 140 CG 0.169 REMARK 500 GLU B 140 CG GLU B 140 CD 0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 30 CA - CB - CG ANGL. DEV. = 18.5 DEGREES REMARK 500 LEU B 30 CA - CB - CG ANGL. DEV. = 21.4 DEGREES REMARK 500 LEU C 30 CA - CB - CG ANGL. DEV. = 21.3 DEGREES REMARK 500 ARG C 92 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 LEU D 30 CA - CB - CG ANGL. DEV. = 18.7 DEGREES REMARK 500 LEU E 30 CA - CB - CG ANGL. DEV. = 19.0 DEGREES REMARK 500 LEU F 30 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 LEU G 30 CA - CB - CG ANGL. DEV. = 20.9 DEGREES REMARK 500 LEU H 30 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 24 -56.74 -121.00 REMARK 500 ASN A 26 54.01 -98.49 REMARK 500 ASN A 35 15.01 57.03 REMARK 500 THR A 36 -54.41 -122.02 REMARK 500 ASP A 37 10.92 -140.45 REMARK 500 ASN A 69 88.66 -156.92 REMARK 500 ASN A 129 55.58 -140.20 REMARK 500 THR B 36 -56.19 -125.28 REMARK 500 ASN B 69 88.58 -154.15 REMARK 500 ASN B 129 54.24 -141.32 REMARK 500 THR C 36 -53.72 -122.50 REMARK 500 ASP C 37 10.34 -141.70 REMARK 500 ASN C 69 94.78 -160.08 REMARK 500 ASP D 37 15.60 -144.55 REMARK 500 ASN D 69 88.96 -154.52 REMARK 500 ASN E 35 13.03 58.43 REMARK 500 THR E 36 -62.98 -121.04 REMARK 500 ASP E 37 15.85 -141.19 REMARK 500 ASN E 69 87.93 -154.59 REMARK 500 ASN F 24 -65.84 -120.01 REMARK 500 THR F 36 -59.62 -121.10 REMARK 500 ASN F 69 89.58 -155.89 REMARK 500 ASN G 48 60.32 62.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 852 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B 854 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH B 855 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH B 856 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH D 822 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH D 823 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH G 852 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH H 762 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH H 763 DISTANCE = 6.46 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 601 REMARK 610 NAG B 601 REMARK 610 NAG C 601 REMARK 610 NAG D 601 REMARK 610 NAG E 601 REMARK 610 NAG G 601 DBREF 5YMS A 1 160 UNP Q9Q2P6 Q9Q2P6_9REOV 64 223 DBREF 5YMS B 1 160 UNP Q9Q2P6 Q9Q2P6_9REOV 64 223 DBREF 5YMS C 1 160 UNP Q9Q2P6 Q9Q2P6_9REOV 64 223 DBREF 5YMS D 1 160 UNP Q9Q2P6 Q9Q2P6_9REOV 64 223 DBREF 5YMS E 1 160 UNP Q9Q2P6 Q9Q2P6_9REOV 64 223 DBREF 5YMS F 1 160 UNP Q9Q2P6 Q9Q2P6_9REOV 64 223 DBREF 5YMS G 1 160 UNP Q9Q2P6 Q9Q2P6_9REOV 64 223 DBREF 5YMS H 1 160 UNP Q9Q2P6 Q9Q2P6_9REOV 64 223 SEQADV 5YMS MET A 0 UNP Q9Q2P6 INITIATING METHIONINE SEQADV 5YMS MET B 0 UNP Q9Q2P6 INITIATING METHIONINE SEQADV 5YMS MET C 0 UNP Q9Q2P6 INITIATING METHIONINE SEQADV 5YMS MET D 0 UNP Q9Q2P6 INITIATING METHIONINE SEQADV 5YMS MET E 0 UNP Q9Q2P6 INITIATING METHIONINE SEQADV 5YMS MET F 0 UNP Q9Q2P6 INITIATING METHIONINE SEQADV 5YMS MET G 0 UNP Q9Q2P6 INITIATING METHIONINE SEQADV 5YMS MET H 0 UNP Q9Q2P6 INITIATING METHIONINE SEQRES 1 A 161 MET VAL LEU ASP GLY PRO TYR GLN PRO VAL ALA PHE LYS SEQRES 2 A 161 PRO PRO ASN ASP TYR TRP ILE LEU VAL ASN SER ASN SER SEQRES 3 A 161 ASN GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL SEQRES 4 A 161 TRP VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER SEQRES 5 A 161 GLU SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN SEQRES 6 A 161 ILE THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET SEQRES 7 A 161 GLU MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS SEQRES 8 A 161 LYS ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE SEQRES 9 A 161 LEU LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU SEQRES 10 A 161 THR PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN SEQRES 11 A 161 LEU ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR SEQRES 12 A 161 ILE ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR SEQRES 13 A 161 ILE ASN THR GLY LEU SEQRES 1 B 161 MET VAL LEU ASP GLY PRO TYR GLN PRO VAL ALA PHE LYS SEQRES 2 B 161 PRO PRO ASN ASP TYR TRP ILE LEU VAL ASN SER ASN SER SEQRES 3 B 161 ASN GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL SEQRES 4 B 161 TRP VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER SEQRES 5 B 161 GLU SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN SEQRES 6 B 161 ILE THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET SEQRES 7 B 161 GLU MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS SEQRES 8 B 161 LYS ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE SEQRES 9 B 161 LEU LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU SEQRES 10 B 161 THR PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN SEQRES 11 B 161 LEU ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR SEQRES 12 B 161 ILE ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR SEQRES 13 B 161 ILE ASN THR GLY LEU SEQRES 1 C 161 MET VAL LEU ASP GLY PRO TYR GLN PRO VAL ALA PHE LYS SEQRES 2 C 161 PRO PRO ASN ASP TYR TRP ILE LEU VAL ASN SER ASN SER SEQRES 3 C 161 ASN GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL SEQRES 4 C 161 TRP VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER SEQRES 5 C 161 GLU SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN SEQRES 6 C 161 ILE THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET SEQRES 7 C 161 GLU MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS SEQRES 8 C 161 LYS ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE SEQRES 9 C 161 LEU LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU SEQRES 10 C 161 THR PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN SEQRES 11 C 161 LEU ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR SEQRES 12 C 161 ILE ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR SEQRES 13 C 161 ILE ASN THR GLY LEU SEQRES 1 D 161 MET VAL LEU ASP GLY PRO TYR GLN PRO VAL ALA PHE LYS SEQRES 2 D 161 PRO PRO ASN ASP TYR TRP ILE LEU VAL ASN SER ASN SER SEQRES 3 D 161 ASN GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL SEQRES 4 D 161 TRP VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER SEQRES 5 D 161 GLU SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN SEQRES 6 D 161 ILE THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET SEQRES 7 D 161 GLU MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS SEQRES 8 D 161 LYS ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE SEQRES 9 D 161 LEU LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU SEQRES 10 D 161 THR PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN SEQRES 11 D 161 LEU ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR SEQRES 12 D 161 ILE ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR SEQRES 13 D 161 ILE ASN THR GLY LEU SEQRES 1 E 161 MET VAL LEU ASP GLY PRO TYR GLN PRO VAL ALA PHE LYS SEQRES 2 E 161 PRO PRO ASN ASP TYR TRP ILE LEU VAL ASN SER ASN SER SEQRES 3 E 161 ASN GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL SEQRES 4 E 161 TRP VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER SEQRES 5 E 161 GLU SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN SEQRES 6 E 161 ILE THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET SEQRES 7 E 161 GLU MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS SEQRES 8 E 161 LYS ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE SEQRES 9 E 161 LEU LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU SEQRES 10 E 161 THR PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN SEQRES 11 E 161 LEU ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR SEQRES 12 E 161 ILE ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR SEQRES 13 E 161 ILE ASN THR GLY LEU SEQRES 1 F 161 MET VAL LEU ASP GLY PRO TYR GLN PRO VAL ALA PHE LYS SEQRES 2 F 161 PRO PRO ASN ASP TYR TRP ILE LEU VAL ASN SER ASN SER SEQRES 3 F 161 ASN GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL SEQRES 4 F 161 TRP VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER SEQRES 5 F 161 GLU SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN SEQRES 6 F 161 ILE THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET SEQRES 7 F 161 GLU MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS SEQRES 8 F 161 LYS ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE SEQRES 9 F 161 LEU LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU SEQRES 10 F 161 THR PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN SEQRES 11 F 161 LEU ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR SEQRES 12 F 161 ILE ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR SEQRES 13 F 161 ILE ASN THR GLY LEU SEQRES 1 G 161 MET VAL LEU ASP GLY PRO TYR GLN PRO VAL ALA PHE LYS SEQRES 2 G 161 PRO PRO ASN ASP TYR TRP ILE LEU VAL ASN SER ASN SER SEQRES 3 G 161 ASN GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL SEQRES 4 G 161 TRP VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER SEQRES 5 G 161 GLU SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN SEQRES 6 G 161 ILE THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET SEQRES 7 G 161 GLU MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS SEQRES 8 G 161 LYS ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE SEQRES 9 G 161 LEU LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU SEQRES 10 G 161 THR PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN SEQRES 11 G 161 LEU ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR SEQRES 12 G 161 ILE ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR SEQRES 13 G 161 ILE ASN THR GLY LEU SEQRES 1 H 161 MET VAL LEU ASP GLY PRO TYR GLN PRO VAL ALA PHE LYS SEQRES 2 H 161 PRO PRO ASN ASP TYR TRP ILE LEU VAL ASN SER ASN SER SEQRES 3 H 161 ASN GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL SEQRES 4 H 161 TRP VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER SEQRES 5 H 161 GLU SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN SEQRES 6 H 161 ILE THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET SEQRES 7 H 161 GLU MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS SEQRES 8 H 161 LYS ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE SEQRES 9 H 161 LEU LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU SEQRES 10 H 161 THR PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN SEQRES 11 H 161 LEU ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR SEQRES 12 H 161 ILE ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR SEQRES 13 H 161 ILE ASN THR GLY LEU HET A2G I 1 15 HET GAL I 2 11 HET NAG I 3 14 HET A2G J 1 15 HET GAL J 2 11 HET NAG J 3 14 HET NAG A 601 14 HET NAG B 601 14 HET NAG C 601 14 HET NAG D 601 14 HET NAG E 601 14 HET NAG G 601 14 HETNAM A2G 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN A2G N-ACETYL-ALPHA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 A2G ALPHA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 A2G ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-2-DEOXY-2-AMINO- HETSYN 4 A2G GALACTOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 9 A2G 2(C8 H15 N O6) FORMUL 9 GAL 2(C6 H12 O6) FORMUL 9 NAG 8(C8 H15 N O6) FORMUL 17 HOH *982(H2 O) HELIX 1 AA1 GLN A 148 GLY A 159 1 12 HELIX 2 AA2 GLN B 148 GLY B 159 1 12 HELIX 3 AA3 ASN C 129 ILE C 133 5 5 HELIX 4 AA4 GLN C 148 GLY C 159 1 12 HELIX 5 AA5 ASN D 129 ILE D 133 5 5 HELIX 6 AA6 GLN D 148 GLY D 159 1 12 HELIX 7 AA7 ASN E 129 ILE E 133 5 5 HELIX 8 AA8 GLN E 148 GLY E 159 1 12 HELIX 9 AA9 GLN F 148 GLY F 159 1 12 HELIX 10 AB1 GLN G 148 GLY G 159 1 12 HELIX 11 AB2 GLN H 148 GLY H 159 1 12 SHEET 1 AA111 ASP A 3 TYR A 6 0 SHEET 2 AA111 PHE A 141 PRO A 145 -1 O PHE A 141 N TYR A 6 SHEET 3 AA111 TYR A 17 ASN A 22 -1 N TRP A 18 O ILE A 144 SHEET 4 AA111 LEU A 100 HIS A 106 -1 O VAL A 101 N VAL A 21 SHEET 5 AA111 ARG A 109 GLU A 116 -1 O TRP A 111 N LEU A 104 SHEET 6 AA111 GLN A 89 SER A 96 1 N THR A 95 O GLY A 115 SHEET 7 AA111 TRP A 74 ARG A 81 -1 N PHE A 76 O LEU A 94 SHEET 8 AA111 TRP A 39 ILE A 45 -1 N ALA A 41 O MET A 79 SHEET 9 AA111 VAL A 28 THR A 33 -1 N GLY A 32 O VAL A 40 SHEET 10 AA111 SER A 134 THR A 137 -1 O THR A 136 N GLU A 31 SHEET 11 AA111 ALA A 10 PHE A 11 -1 N PHE A 11 O VAL A 135 SHEET 1 AA2 6 ASP A 3 TYR A 6 0 SHEET 2 AA2 6 PHE A 141 PRO A 145 -1 O PHE A 141 N TYR A 6 SHEET 3 AA2 6 TYR A 17 ASN A 22 -1 N TRP A 18 O ILE A 144 SHEET 4 AA2 6 LEU A 100 HIS A 106 -1 O VAL A 101 N VAL A 21 SHEET 5 AA2 6 ARG A 109 GLU A 116 -1 O TRP A 111 N LEU A 104 SHEET 6 AA2 6 THR A 121 THR A 126 -1 O THR A 121 N HIS A 114 SHEET 1 AA3 2 VAL A 49 LEU A 58 0 SHEET 2 AA3 2 VAL A 61 ASN A 69 -1 O ASN A 69 N VAL A 49 SHEET 1 AA411 ASP B 3 TYR B 6 0 SHEET 2 AA411 PHE B 141 PRO B 145 -1 O PHE B 141 N TYR B 6 SHEET 3 AA411 TYR B 17 ASN B 22 -1 N TRP B 18 O ILE B 144 SHEET 4 AA411 LEU B 100 HIS B 106 -1 O VAL B 101 N VAL B 21 SHEET 5 AA411 ARG B 109 GLU B 116 -1 O TRP B 111 N LEU B 104 SHEET 6 AA411 GLN B 89 SER B 96 1 N THR B 95 O GLY B 115 SHEET 7 AA411 TRP B 74 ARG B 81 -1 N PHE B 76 O LEU B 94 SHEET 8 AA411 TRP B 39 ILE B 45 -1 N ALA B 41 O MET B 79 SHEET 9 AA411 GLY B 27 THR B 33 -1 N GLY B 27 O SER B 44 SHEET 10 AA411 SER B 134 THR B 137 -1 O THR B 136 N GLU B 31 SHEET 11 AA411 ALA B 10 PHE B 11 -1 N PHE B 11 O VAL B 135 SHEET 1 AA5 6 ASP B 3 TYR B 6 0 SHEET 2 AA5 6 PHE B 141 PRO B 145 -1 O PHE B 141 N TYR B 6 SHEET 3 AA5 6 TYR B 17 ASN B 22 -1 N TRP B 18 O ILE B 144 SHEET 4 AA5 6 LEU B 100 HIS B 106 -1 O VAL B 101 N VAL B 21 SHEET 5 AA5 6 ARG B 109 GLU B 116 -1 O TRP B 111 N LEU B 104 SHEET 6 AA5 6 THR B 121 THR B 126 -1 O SER B 125 N LEU B 110 SHEET 1 AA6 2 VAL B 49 LEU B 58 0 SHEET 2 AA6 2 VAL B 61 ASN B 69 -1 O VAL B 67 N GLU B 52 SHEET 1 AA7 8 ALA C 10 PHE C 11 0 SHEET 2 AA7 8 SER C 134 THR C 137 -1 O VAL C 135 N PHE C 11 SHEET 3 AA7 8 GLY C 27 THR C 33 -1 N GLU C 31 O THR C 136 SHEET 4 AA7 8 TRP C 39 ILE C 45 -1 O SER C 44 N GLY C 27 SHEET 5 AA7 8 TRP C 74 ARG C 81 -1 O MET C 79 N ALA C 41 SHEET 6 AA7 8 GLN C 89 SER C 96 -1 O LEU C 94 N PHE C 76 SHEET 7 AA7 8 ARG C 109 GLU C 116 1 O GLY C 115 N THR C 95 SHEET 8 AA7 8 THR C 121 THR C 126 -1 O THR C 121 N HIS C 114 SHEET 1 AA813 ALA C 10 PHE C 11 0 SHEET 2 AA813 SER C 134 THR C 137 -1 O VAL C 135 N PHE C 11 SHEET 3 AA813 GLY C 27 THR C 33 -1 N GLU C 31 O THR C 136 SHEET 4 AA813 TRP C 39 ILE C 45 -1 O SER C 44 N GLY C 27 SHEET 5 AA813 TRP C 74 ARG C 81 -1 O MET C 79 N ALA C 41 SHEET 6 AA813 GLN C 89 SER C 96 -1 O LEU C 94 N PHE C 76 SHEET 7 AA813 ARG C 109 GLU C 116 1 O GLY C 115 N THR C 95 SHEET 8 AA813 LEU C 100 HIS C 106 -1 N LEU C 104 O TRP C 111 SHEET 9 AA813 TYR C 17 ASN C 22 -1 N VAL C 21 O VAL C 101 SHEET 10 AA813 PHE C 141 PRO C 145 -1 O TYR C 142 N LEU C 20 SHEET 11 AA813 LEU C 2 TYR C 6 -1 N TYR C 6 O PHE C 141 SHEET 12 AA813 VAL H 61 ASN H 69 -1 O GLN H 64 N LEU C 2 SHEET 13 AA813 VAL H 49 LEU H 58 -1 N VAL H 49 O ASN H 69 SHEET 1 AA9 2 VAL C 49 LEU C 58 0 SHEET 2 AA9 2 VAL C 61 ASN C 69 -1 O ASN C 69 N VAL C 49 SHEET 1 AB111 ASP D 3 TYR D 6 0 SHEET 2 AB111 PHE D 141 PRO D 145 -1 O PHE D 141 N TYR D 6 SHEET 3 AB111 TYR D 17 ASN D 22 -1 N TRP D 18 O ILE D 144 SHEET 4 AB111 LEU D 100 HIS D 106 -1 O VAL D 101 N VAL D 21 SHEET 5 AB111 ARG D 109 GLU D 116 -1 O TRP D 111 N LEU D 104 SHEET 6 AB111 GLN D 89 SER D 96 1 N THR D 95 O GLY D 115 SHEET 7 AB111 TRP D 74 ARG D 81 -1 N TRP D 74 O SER D 96 SHEET 8 AB111 TRP D 39 ILE D 45 -1 N ALA D 41 O MET D 79 SHEET 9 AB111 GLY D 27 THR D 33 -1 N GLY D 27 O SER D 44 SHEET 10 AB111 SER D 134 THR D 137 -1 O SER D 134 N THR D 33 SHEET 11 AB111 ALA D 10 PHE D 11 -1 N PHE D 11 O VAL D 135 SHEET 1 AB2 6 ASP D 3 TYR D 6 0 SHEET 2 AB2 6 PHE D 141 PRO D 145 -1 O PHE D 141 N TYR D 6 SHEET 3 AB2 6 TYR D 17 ASN D 22 -1 N TRP D 18 O ILE D 144 SHEET 4 AB2 6 LEU D 100 HIS D 106 -1 O VAL D 101 N VAL D 21 SHEET 5 AB2 6 ARG D 109 GLU D 116 -1 O TRP D 111 N LEU D 104 SHEET 6 AB2 6 THR D 121 THR D 126 -1 O SER D 125 N LEU D 110 SHEET 1 AB3 2 VAL D 49 LEU D 58 0 SHEET 2 AB3 2 VAL D 61 ASN D 69 -1 O VAL D 67 N GLU D 52 SHEET 1 AB411 ASP E 3 TYR E 6 0 SHEET 2 AB411 GLU E 140 PRO E 145 -1 O PHE E 141 N TYR E 6 SHEET 3 AB411 TYR E 17 ASN E 22 -1 N ASN E 22 O GLU E 140 SHEET 4 AB411 LEU E 100 HIS E 106 -1 O VAL E 101 N VAL E 21 SHEET 5 AB411 ARG E 109 GLU E 116 -1 O TRP E 111 N LEU E 104 SHEET 6 AB411 GLN E 89 SER E 96 1 N THR E 95 O GLY E 115 SHEET 7 AB411 TRP E 74 ARG E 81 -1 N PHE E 76 O LEU E 94 SHEET 8 AB411 TRP E 39 ILE E 45 -1 N ALA E 41 O MET E 79 SHEET 9 AB411 GLY E 27 THR E 33 -1 N VAL E 29 O ILE E 42 SHEET 10 AB411 SER E 134 THR E 137 -1 O THR E 136 N GLU E 31 SHEET 11 AB411 ALA E 10 PHE E 11 -1 N PHE E 11 O VAL E 135 SHEET 1 AB5 6 ASP E 3 TYR E 6 0 SHEET 2 AB5 6 GLU E 140 PRO E 145 -1 O PHE E 141 N TYR E 6 SHEET 3 AB5 6 TYR E 17 ASN E 22 -1 N ASN E 22 O GLU E 140 SHEET 4 AB5 6 LEU E 100 HIS E 106 -1 O VAL E 101 N VAL E 21 SHEET 5 AB5 6 ARG E 109 GLU E 116 -1 O TRP E 111 N LEU E 104 SHEET 6 AB5 6 THR E 121 THR E 126 -1 O SER E 125 N LEU E 110 SHEET 1 AB6 2 VAL E 49 LEU E 58 0 SHEET 2 AB6 2 VAL E 61 ASN E 69 -1 O ASN E 69 N VAL E 49 SHEET 1 AB711 ASP F 3 TYR F 6 0 SHEET 2 AB711 PHE F 141 PRO F 145 -1 O PHE F 141 N TYR F 6 SHEET 3 AB711 TYR F 17 ASN F 22 -1 N TRP F 18 O ILE F 144 SHEET 4 AB711 LEU F 100 HIS F 106 -1 O VAL F 101 N VAL F 21 SHEET 5 AB711 ARG F 109 GLU F 116 -1 O TRP F 111 N LEU F 104 SHEET 6 AB711 GLN F 89 SER F 96 1 N THR F 95 O GLY F 115 SHEET 7 AB711 TRP F 74 ARG F 81 -1 N GLU F 78 O ARG F 92 SHEET 8 AB711 TRP F 39 ILE F 45 -1 N ALA F 41 O MET F 79 SHEET 9 AB711 GLY F 27 THR F 33 -1 N GLY F 27 O SER F 44 SHEET 10 AB711 SER F 134 THR F 137 -1 O THR F 136 N GLU F 31 SHEET 11 AB711 ALA F 10 PHE F 11 -1 N PHE F 11 O VAL F 135 SHEET 1 AB8 6 ASP F 3 TYR F 6 0 SHEET 2 AB8 6 PHE F 141 PRO F 145 -1 O PHE F 141 N TYR F 6 SHEET 3 AB8 6 TYR F 17 ASN F 22 -1 N TRP F 18 O ILE F 144 SHEET 4 AB8 6 LEU F 100 HIS F 106 -1 O VAL F 101 N VAL F 21 SHEET 5 AB8 6 ARG F 109 GLU F 116 -1 O TRP F 111 N LEU F 104 SHEET 6 AB8 6 THR F 121 THR F 126 -1 O SER F 125 N LEU F 110 SHEET 1 AB913 VAL F 49 LEU F 58 0 SHEET 2 AB913 VAL F 61 ASN F 69 -1 O ASN F 69 N VAL F 49 SHEET 3 AB913 VAL G 1 TYR G 6 -1 O LEU G 2 N GLN F 64 SHEET 4 AB913 PHE G 141 PRO G 145 -1 O PHE G 141 N TYR G 6 SHEET 5 AB913 TYR G 17 ASN G 22 -1 N TRP G 18 O ILE G 144 SHEET 6 AB913 LEU G 100 HIS G 106 -1 O VAL G 101 N VAL G 21 SHEET 7 AB913 ARG G 109 GLU G 116 -1 O TRP G 111 N LEU G 104 SHEET 8 AB913 GLN G 89 SER G 96 1 N THR G 95 O GLY G 115 SHEET 9 AB913 TRP G 74 ARG G 81 -1 N PHE G 76 O LEU G 94 SHEET 10 AB913 TRP G 39 ILE G 45 -1 N ALA G 41 O MET G 79 SHEET 11 AB913 GLY G 27 THR G 33 -1 N GLY G 27 O SER G 44 SHEET 12 AB913 SER G 134 THR G 137 -1 O THR G 136 N GLU G 31 SHEET 13 AB913 ALA G 10 PHE G 11 -1 N PHE G 11 O VAL G 135 SHEET 1 AC1 8 VAL F 49 LEU F 58 0 SHEET 2 AC1 8 VAL F 61 ASN F 69 -1 O ASN F 69 N VAL F 49 SHEET 3 AC1 8 VAL G 1 TYR G 6 -1 O LEU G 2 N GLN F 64 SHEET 4 AC1 8 PHE G 141 PRO G 145 -1 O PHE G 141 N TYR G 6 SHEET 5 AC1 8 TYR G 17 ASN G 22 -1 N TRP G 18 O ILE G 144 SHEET 6 AC1 8 LEU G 100 HIS G 106 -1 O VAL G 101 N VAL G 21 SHEET 7 AC1 8 ARG G 109 GLU G 116 -1 O TRP G 111 N LEU G 104 SHEET 8 AC1 8 THR G 121 THR G 126 -1 O SER G 125 N LEU G 110 SHEET 1 AC2 2 VAL G 49 LEU G 58 0 SHEET 2 AC2 2 VAL G 61 ASN G 69 -1 O ASN G 69 N VAL G 49 SHEET 1 AC311 ASP H 3 TYR H 6 0 SHEET 2 AC311 PHE H 141 PRO H 145 -1 O PHE H 141 N TYR H 6 SHEET 3 AC311 TYR H 17 ASN H 22 -1 N TRP H 18 O ILE H 144 SHEET 4 AC311 LEU H 100 HIS H 106 -1 O ILE H 103 N ILE H 19 SHEET 5 AC311 ARG H 109 GLU H 116 -1 O TRP H 111 N LEU H 104 SHEET 6 AC311 GLN H 89 SER H 96 1 N THR H 95 O GLY H 115 SHEET 7 AC311 TRP H 74 ARG H 81 -1 N PHE H 80 O GLN H 89 SHEET 8 AC311 TRP H 39 ILE H 45 -1 N ALA H 41 O MET H 79 SHEET 9 AC311 GLY H 27 THR H 33 -1 N GLY H 27 O SER H 44 SHEET 10 AC311 SER H 134 THR H 137 -1 O THR H 136 N GLU H 31 SHEET 11 AC311 ALA H 10 PHE H 11 -1 N PHE H 11 O VAL H 135 SHEET 1 AC4 6 ASP H 3 TYR H 6 0 SHEET 2 AC4 6 PHE H 141 PRO H 145 -1 O PHE H 141 N TYR H 6 SHEET 3 AC4 6 TYR H 17 ASN H 22 -1 N TRP H 18 O ILE H 144 SHEET 4 AC4 6 LEU H 100 HIS H 106 -1 O ILE H 103 N ILE H 19 SHEET 5 AC4 6 ARG H 109 GLU H 116 -1 O TRP H 111 N LEU H 104 SHEET 6 AC4 6 THR H 121 THR H 126 -1 O THR H 121 N HIS H 114 LINK O3 A2G I 1 C1 GAL I 2 1555 1555 1.45 LINK O6 A2G I 1 C1 NAG I 3 1555 1555 1.46 LINK O3 A2G J 1 C1 GAL J 2 1555 1555 1.45 LINK O6 A2G J 1 C1 NAG J 3 1555 1555 1.45 CISPEP 1 GLY A 4 PRO A 5 0 2.64 CISPEP 2 THR A 117 PRO A 118 0 9.20 CISPEP 3 GLY B 4 PRO B 5 0 5.61 CISPEP 4 THR B 117 PRO B 118 0 4.96 CISPEP 5 GLY C 4 PRO C 5 0 8.55 CISPEP 6 THR C 117 PRO C 118 0 5.27 CISPEP 7 GLY D 4 PRO D 5 0 1.33 CISPEP 8 THR D 117 PRO D 118 0 5.34 CISPEP 9 GLY E 4 PRO E 5 0 2.67 CISPEP 10 THR E 117 PRO E 118 0 5.62 CISPEP 11 GLY F 4 PRO F 5 0 2.51 CISPEP 12 THR F 117 PRO F 118 0 4.48 CISPEP 13 GLY G 4 PRO G 5 0 9.58 CISPEP 14 THR G 117 PRO G 118 0 5.03 CISPEP 15 GLY H 4 PRO H 5 0 2.55 CISPEP 16 THR H 117 PRO H 118 0 7.81 CRYST1 179.776 129.346 86.365 90.00 116.07 90.00 C 1 2 1 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005562 0.000000 0.002722 0.00000 SCALE2 0.000000 0.007731 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012891 0.00000