HEADER PLANT PROTEIN 04-NOV-17 5YQ3 TITLE SOLUTION NMR STRUCTURE AND BACKBONE DYNAMICS OF THE PARTIALLY TITLE 2 DISORDERED ARABIDOPSIS THALIANA PHLOEM PROTEIN 16-1, A PUTATIVE MRNA TITLE 3 TRANSPORTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: AT3G55470; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY COMPND 5 PROTEIN,ELICITOR RESPONSIVE/PHLOEM-LIKE PROTEIN,PUTATIVE ELICITOR COMPND 6 RESPONSIVE/PHLOEM; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: T22E16.130, AT3G55470, AT3G55470/T22E16_130; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS STRUCTURE FROM CYANA 2.1, PLANT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.K.BHUYAN,P.SASHI REVDAT 3 15-MAY-24 5YQ3 1 REMARK REVDAT 2 14-JUN-23 5YQ3 1 REMARK REVDAT 1 18-APR-18 5YQ3 0 JRNL AUTH P.SASHI,K.K.SINGARAPU,A.K.BHUYAN JRNL TITL SOLUTION NMR STRUCTURE AND BACKBONE DYNAMICS OF PARTIALLY JRNL TITL 2 DISORDERED ARABIDOPSIS THALIANA PHLOEM PROTEIN 16-1, A JRNL TITL 3 PUTATIVE MRNA TRANSPORTER. JRNL REF BIOCHEMISTRY V. 57 912 2018 JRNL REFN ISSN 1520-4995 JRNL PMID 29320165 JRNL DOI 10.1021/ACS.BIOCHEM.7B01071 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YQ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1300005712. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.2 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 100 UM [U-99% 13C; U-99% 15N] REMARK 210 ARABIDOPSIS THALIANA PHLOEM REMARK 210 PROTEIN 16-1, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HBHA(CO)NH; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D HNCO; 3D HN(CO)CA REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, XEASY, TOPSPIN, NMRPIPE, REMARK 210 SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 11 -75.52 -78.79 REMARK 500 1 PHE A 21 110.25 63.42 REMARK 500 1 PRO A 27 88.24 -69.79 REMARK 500 1 LYS A 34 -74.85 -104.53 REMARK 500 1 SER A 41 -169.31 -63.20 REMARK 500 1 VAL A 42 162.99 -48.79 REMARK 500 1 LYS A 44 49.62 -97.56 REMARK 500 1 GLU A 45 101.13 63.95 REMARK 500 1 ASP A 46 87.88 49.91 REMARK 500 1 PRO A 51 -174.20 -69.73 REMARK 500 1 ALA A 68 84.67 46.26 REMARK 500 1 ASP A 69 -169.11 63.86 REMARK 500 1 TYR A 70 169.89 64.68 REMARK 500 1 LYS A 71 96.87 63.82 REMARK 500 1 LYS A 75 61.69 -119.09 REMARK 500 1 VAL A 76 31.83 -148.70 REMARK 500 1 MET A 77 -169.43 -110.75 REMARK 500 1 HIS A 79 87.56 51.73 REMARK 500 1 PHE A 82 -48.17 -172.25 REMARK 500 1 SER A 83 91.64 -172.68 REMARK 500 1 THR A 92 89.77 -53.36 REMARK 500 1 HIS A 94 103.17 -39.12 REMARK 500 1 VAL A 95 27.56 -151.68 REMARK 500 1 PRO A 112 79.72 -69.78 REMARK 500 1 TYR A 115 -175.11 -58.25 REMARK 500 1 ILE A 117 19.84 -154.25 REMARK 500 1 ASP A 119 103.23 -51.87 REMARK 500 1 SER A 120 -75.38 -143.66 REMARK 500 1 ASP A 121 75.36 -175.90 REMARK 500 1 LEU A 122 -74.91 -139.25 REMARK 500 1 SER A 123 34.97 -157.33 REMARK 500 1 VAL A 125 174.14 -53.35 REMARK 500 1 VAL A 132 95.08 -59.65 REMARK 500 1 GLN A 138 26.78 -158.08 REMARK 500 1 ASP A 139 65.82 -107.38 REMARK 500 1 ARG A 140 100.47 -56.11 REMARK 500 1 MET A 142 -74.71 -126.19 REMARK 500 1 ASP A 143 -169.82 52.52 REMARK 500 1 HIS A 152 -74.50 -146.35 REMARK 500 1 SER A 153 -176.03 -179.14 REMARK 500 1 ASN A 154 99.85 -178.92 REMARK 500 1 HIS A 161 -176.31 -176.19 REMARK 500 2 ILE A 11 -71.69 -91.29 REMARK 500 2 ARG A 18 -169.99 63.38 REMARK 500 2 ASP A 20 61.91 -118.46 REMARK 500 2 LEU A 22 98.50 63.08 REMARK 500 2 ASP A 26 65.22 -175.37 REMARK 500 2 TYR A 33 25.23 -141.05 REMARK 500 2 LYS A 34 -74.63 -105.63 REMARK 500 2 ASP A 46 106.83 63.70 REMARK 500 REMARK 500 THIS ENTRY HAS 740 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36129 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE AND BACKBONE DYNAMICS OF THE PARTIALLY REMARK 900 DISORDERED ARABIDOPSIS THALIANA PHLOEM PROTEIN 16-1, A PUTATIVE REMARK 900 MRNA TRANSPORTER DBREF 5YQ3 A 1 156 UNP Q9M2T2 Q9M2T2_ARATH 1 156 SEQADV 5YQ3 ASN A 154 UNP Q9M2T2 GLN 154 ENGINEERED MUTATION SEQADV 5YQ3 HIS A 157 UNP Q9M2T2 EXPRESSION TAG SEQADV 5YQ3 HIS A 158 UNP Q9M2T2 EXPRESSION TAG SEQADV 5YQ3 HIS A 159 UNP Q9M2T2 EXPRESSION TAG SEQADV 5YQ3 HIS A 160 UNP Q9M2T2 EXPRESSION TAG SEQADV 5YQ3 HIS A 161 UNP Q9M2T2 EXPRESSION TAG SEQADV 5YQ3 HIS A 162 UNP Q9M2T2 EXPRESSION TAG SEQRES 1 A 162 MET ALA VAL GLY ILE LEU GLU VAL SER LEU ILE SER GLY SEQRES 2 A 162 LYS GLY LEU LYS ARG SER ASP PHE LEU GLY LYS ILE ASP SEQRES 3 A 162 PRO TYR VAL GLU ILE GLN TYR LYS GLY GLN THR ARG LYS SEQRES 4 A 162 SER SER VAL ALA LYS GLU ASP GLY GLY ARG ASN PRO THR SEQRES 5 A 162 TRP ASN ASP LYS LEU LYS TRP ARG ALA GLU PHE PRO GLY SEQRES 6 A 162 SER GLY ALA ASP TYR LYS LEU ILE VAL LYS VAL MET ASP SEQRES 7 A 162 HIS ASP THR PHE SER SER ASP ASP PHE ILE GLY GLU ALA SEQRES 8 A 162 THR VAL HIS VAL LYS GLU LEU LEU GLU MET GLY VAL GLU SEQRES 9 A 162 LYS GLY THR ALA GLU LEU ARG PRO THR LYS TYR ASN ILE SEQRES 10 A 162 VAL ASP SER ASP LEU SER PHE VAL GLY GLU LEU LEU ILE SEQRES 11 A 162 GLY VAL SER TYR SER LEU LEU GLN ASP ARG GLY MET ASP SEQRES 12 A 162 GLY GLU GLN PHE GLY GLY TRP LYS HIS SER ASN VAL ASP SEQRES 13 A 162 HIS HIS HIS HIS HIS HIS HELIX 1 AA1 VAL A 95 MET A 101 1 7 HELIX 2 AA2 MET A 101 GLY A 106 1 6 SHEET 1 AA1 2 GLY A 4 SER A 9 0 SHEET 2 AA1 2 LYS A 56 ALA A 61 -1 O TRP A 59 N LEU A 6 SHEET 1 AA2 2 THR A 107 ALA A 108 0 SHEET 2 AA2 2 TYR A 134 SER A 135 -1 O TYR A 134 N ALA A 108 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1