data_5YT2 # _entry.id 5YT2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YT2 pdb_00005yt2 10.2210/pdb5yt2/pdb WWPDB D_1300005869 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5YT2 _pdbx_database_status.recvd_initial_deposition_date 2017-11-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Takimoto-Kamimura, M.' 1 ? 'Kakuda, S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Org. Biomol. Chem.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1477-0539 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 2448 _citation.page_last 2455 _citation.title ;Effects of 2-substitution on 14-epi-19-nortachysterol-mediated biological events: based on synthesis and X-ray co-crystallographic analysis with the human vitamin D receptor. ; _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/C8OB00158H _citation.pdbx_database_id_PubMed 29560490 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sawada, D.' 1 ? primary 'Kakuda, S.' 2 ? primary 'Takeuchi, A.' 3 ? primary 'Kawagoe, F.' 4 ? primary 'Takimoto-Kamimura, M.' 5 ? primary 'Kittaka, A.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5YT2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.565 _cell.length_a_esd ? _cell.length_b 51.565 _cell.length_b_esd ? _cell.length_c 132.490 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YT2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vitamin D3 receptor' 28948.420 1 ? ? 'ligand binding domain' ? 2 non-polymer syn ;(1R,2S,3R)-5-[(E)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-1,2,3,3a,6,7-hexahydroinden-4-yl]ethenyl]-2-(3-oxidanylpropyl)cyclohex-4-ene-1,3-diol ; 460.689 1 ? ? ? ? 3 water nat water 18.015 151 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'VDR,1,25-dihydroxyvitamin D3 receptor,Nuclear receptor subfamily 1 group I member 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMI PGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEE EHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQP ECSMKLTPLVLEVFG ; _entity_poly.pdbx_seq_one_letter_code_can ;DSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMI PGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEE EHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQP ECSMKLTPLVLEVFG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 SER n 1 3 LEU n 1 4 ARG n 1 5 PRO n 1 6 LYS n 1 7 LEU n 1 8 SER n 1 9 GLU n 1 10 GLU n 1 11 GLN n 1 12 GLN n 1 13 ARG n 1 14 ILE n 1 15 ILE n 1 16 ALA n 1 17 ILE n 1 18 LEU n 1 19 LEU n 1 20 ASP n 1 21 ALA n 1 22 HIS n 1 23 HIS n 1 24 LYS n 1 25 THR n 1 26 TYR n 1 27 ASP n 1 28 PRO n 1 29 THR n 1 30 TYR n 1 31 SER n 1 32 ASP n 1 33 PHE n 1 34 CYS n 1 35 GLN n 1 36 PHE n 1 37 ARG n 1 38 PRO n 1 39 PRO n 1 40 VAL n 1 41 ARG n 1 42 VAL n 1 43 ASN n 1 44 ASP n 1 45 GLY n 1 46 GLY n 1 47 GLY n 1 48 SER n 1 49 VAL n 1 50 THR n 1 51 LEU n 1 52 GLU n 1 53 LEU n 1 54 SER n 1 55 GLN n 1 56 LEU n 1 57 SER n 1 58 MET n 1 59 LEU n 1 60 PRO n 1 61 HIS n 1 62 LEU n 1 63 ALA n 1 64 ASP n 1 65 LEU n 1 66 VAL n 1 67 SER n 1 68 TYR n 1 69 SER n 1 70 ILE n 1 71 GLN n 1 72 LYS n 1 73 VAL n 1 74 ILE n 1 75 GLY n 1 76 PHE n 1 77 ALA n 1 78 LYS n 1 79 MET n 1 80 ILE n 1 81 PRO n 1 82 GLY n 1 83 PHE n 1 84 ARG n 1 85 ASP n 1 86 LEU n 1 87 THR n 1 88 SER n 1 89 GLU n 1 90 ASP n 1 91 GLN n 1 92 ILE n 1 93 VAL n 1 94 LEU n 1 95 LEU n 1 96 LYS n 1 97 SER n 1 98 SER n 1 99 ALA n 1 100 ILE n 1 101 GLU n 1 102 VAL n 1 103 ILE n 1 104 MET n 1 105 LEU n 1 106 ARG n 1 107 SER n 1 108 ASN n 1 109 GLU n 1 110 SER n 1 111 PHE n 1 112 THR n 1 113 MET n 1 114 ASP n 1 115 ASP n 1 116 MET n 1 117 SER n 1 118 TRP n 1 119 THR n 1 120 CYS n 1 121 GLY n 1 122 ASN n 1 123 GLN n 1 124 ASP n 1 125 TYR n 1 126 LYS n 1 127 TYR n 1 128 ARG n 1 129 VAL n 1 130 SER n 1 131 ASP n 1 132 VAL n 1 133 THR n 1 134 LYS n 1 135 ALA n 1 136 GLY n 1 137 HIS n 1 138 SER n 1 139 LEU n 1 140 GLU n 1 141 LEU n 1 142 ILE n 1 143 GLU n 1 144 PRO n 1 145 LEU n 1 146 ILE n 1 147 LYS n 1 148 PHE n 1 149 GLN n 1 150 VAL n 1 151 GLY n 1 152 LEU n 1 153 LYS n 1 154 LYS n 1 155 LEU n 1 156 ASN n 1 157 LEU n 1 158 HIS n 1 159 GLU n 1 160 GLU n 1 161 GLU n 1 162 HIS n 1 163 VAL n 1 164 LEU n 1 165 LEU n 1 166 MET n 1 167 ALA n 1 168 ILE n 1 169 CYS n 1 170 ILE n 1 171 VAL n 1 172 SER n 1 173 PRO n 1 174 ASP n 1 175 ARG n 1 176 PRO n 1 177 GLY n 1 178 VAL n 1 179 GLN n 1 180 ASP n 1 181 ALA n 1 182 ALA n 1 183 LEU n 1 184 ILE n 1 185 GLU n 1 186 ALA n 1 187 ILE n 1 188 GLN n 1 189 ASP n 1 190 ARG n 1 191 LEU n 1 192 SER n 1 193 ASN n 1 194 THR n 1 195 LEU n 1 196 GLN n 1 197 THR n 1 198 TYR n 1 199 ILE n 1 200 ARG n 1 201 CYS n 1 202 ARG n 1 203 HIS n 1 204 PRO n 1 205 PRO n 1 206 PRO n 1 207 GLY n 1 208 SER n 1 209 HIS n 1 210 LEU n 1 211 LEU n 1 212 TYR n 1 213 ALA n 1 214 LYS n 1 215 MET n 1 216 ILE n 1 217 GLN n 1 218 LYS n 1 219 LEU n 1 220 ALA n 1 221 ASP n 1 222 LEU n 1 223 ARG n 1 224 SER n 1 225 LEU n 1 226 ASN n 1 227 GLU n 1 228 GLU n 1 229 HIS n 1 230 SER n 1 231 LYS n 1 232 GLN n 1 233 TYR n 1 234 ARG n 1 235 CYS n 1 236 LEU n 1 237 SER n 1 238 PHE n 1 239 GLN n 1 240 PRO n 1 241 GLU n 1 242 CYS n 1 243 SER n 1 244 MET n 1 245 LYS n 1 246 LEU n 1 247 THR n 1 248 PRO n 1 249 LEU n 1 250 VAL n 1 251 LEU n 1 252 GLU n 1 253 VAL n 1 254 PHE n 1 255 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 47 Human ? 'VDR, NR1I1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 48 255 Human ? 'VDR, NR1I1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP VDR_HUMAN P11473 ? 1 DSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGG 118 2 UNP VDR_HUMAN P11473 ? 1 ;SVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKY RVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPG SHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLEVFG ; 216 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5YT2 A 1 ? 47 ? P11473 118 ? 164 ? 118 164 2 2 5YT2 A 48 ? 255 ? P11473 216 ? 423 ? 216 423 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 90O non-polymer . ;(1R,2S,3R)-5-[(E)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-1,2,3,3a,6,7-hexahydroinden-4-yl]ethenyl]-2-(3-oxidanylpropyl)cyclohex-4-ene-1,3-diol ; ;(1R,2S,3R)-5-[(E)-2-{(1R,3aS,7aR)-1-[(R)-6-hydroxy-6-methylheptan-2-yl]-7a-methyl-2,3,3a,6,7,7a-hexahydro-1H-inden-4-yl}vinyl]-2-(3-hydroxypropyl)cyclohex-4-ene-1,3-diol ; 'C29 H48 O4' 460.689 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YT2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.63 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50mM Mes, 1.4M ammonium sulphate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2011-06-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NE3A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline AR-NE3A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5YT2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 21508 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.7 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 40.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.03 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.366 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.74 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.65 _refine.B_iso_max ? _refine.B_iso_mean 26.551 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.929 _refine.details ;1. The authors state they removed the long loop 165-215 for the crystallization with direct lincage with Gly 164 and Ser 216, so this region recieved quite large steric hindrance and resuled abnormal bond length as usual, and that the bond is existing in real but the bond distance is abnormal by the disorder by the steric hindrances. 2. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS ; _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5YT2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.00 _refine.ls_d_res_low 50.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20336 _refine.ls_number_reflns_R_free 1100 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.85 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19338 _refine.ls_R_factor_R_free 0.23342 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19119 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1DB1 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.179 _refine.pdbx_overall_ESU_R_Free 0.161 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.587 _refine.overall_SU_ML 0.104 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 2027 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 2211 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.018 0.022 2235 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.938 1.996 3043 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.172 5.000 279 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.933 24.216 102 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.428 15.000 411 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 17.692 15.000 16 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.144 0.200 341 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 1694 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.226 0.200 1068 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.302 0.200 1574 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.171 0.200 123 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 0.180 0.200 63 ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? 0.270 0.200 15 ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.214 1.500 1414 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.927 2.000 2218 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.599 3.000 924 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 3.851 4.500 825 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.997 _refine_ls_shell.d_res_low 2.049 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 77 _refine_ls_shell.number_reflns_R_work 1461 _refine_ls_shell.percent_reflns_obs 98.72 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.301 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.190 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5YT2 _struct.title ;Crystal structure of the human vitamin D receptor ligand binding domain complexed with (1R,2S,3R)-5-[(E)-2-{(1R,3aS,7aR)-1-[(R)-6-hydroxy-6-methylheptan-2-yl]-7a-methyl-2,3,3a,6,7,7a-hexahydro-1H-inden-4-yl}vinyl]-2-(3-hydroxypropyl)cyclohex-4-ene-1,3-diol ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YT2 _struct_keywords.text 'Active ligand, Complex, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 8 ? TYR A 26 ? SER A 125 TYR A 143 1 ? 19 HELX_P HELX_P2 AA2 ASP A 32 ? PHE A 36 ? ASP A 149 PHE A 153 5 ? 5 HELX_P HELX_P3 AA3 VAL A 49 ? LEU A 56 ? VAL A 217 LEU A 224 1 ? 8 HELX_P HELX_P4 AA4 MET A 58 ? MET A 79 ? MET A 226 MET A 247 1 ? 22 HELX_P HELX_P5 AA5 GLY A 82 ? LEU A 86 ? GLY A 250 LEU A 254 5 ? 5 HELX_P HELX_P6 AA6 THR A 87 ? SER A 107 ? THR A 255 SER A 275 1 ? 21 HELX_P HELX_P7 AA7 ARG A 128 ? LYS A 134 ? ARG A 296 LYS A 302 1 ? 7 HELX_P HELX_P8 AA8 SER A 138 ? ASN A 156 ? SER A 306 ASN A 324 1 ? 19 HELX_P HELX_P9 AA9 HIS A 158 ? VAL A 171 ? HIS A 326 VAL A 339 1 ? 14 HELX_P HELX_P10 AB1 ASP A 180 ? HIS A 203 ? ASP A 348 HIS A 371 1 ? 24 HELX_P HELX_P11 AB2 GLY A 207 ? HIS A 209 ? GLY A 375 HIS A 377 5 ? 3 HELX_P HELX_P12 AB3 LEU A 210 ? PHE A 238 ? LEU A 378 PHE A 406 1 ? 29 HELX_P HELX_P13 AB4 GLU A 241 ? LEU A 246 ? GLU A 409 LEU A 414 1 ? 6 HELX_P HELX_P14 AB5 THR A 247 ? GLY A 255 ? THR A 415 GLY A 423 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 46 A . ? GLY 163 A GLY 47 A ? GLY 164 A 1 -1.58 2 PRO 204 A . ? PRO 372 A PRO 205 A ? PRO 373 A 1 -6.91 3 PRO 205 A . ? PRO 373 A PRO 206 A ? PRO 374 A 1 -8.77 4 PRO 206 A . ? PRO 374 A GLY 207 A ? GLY 375 A 1 22.91 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 111 ? THR A 112 ? PHE A 279 THR A 280 AA1 2 SER A 117 ? THR A 119 ? SER A 285 THR A 287 AA1 3 LYS A 126 ? TYR A 127 ? LYS A 294 TYR A 295 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 112 ? N THR A 280 O SER A 117 ? O SER A 285 AA1 2 3 N TRP A 118 ? N TRP A 286 O TYR A 127 ? O TYR A 295 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 90O _struct_site.pdbx_auth_seq_id 501 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'binding site for residue 90O A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 THR A 25 ? THR A 142 . ? 1_555 ? 2 AC1 13 TYR A 26 ? TYR A 143 . ? 1_555 ? 3 AC1 13 LEU A 59 ? LEU A 227 . ? 1_555 ? 4 AC1 13 LEU A 65 ? LEU A 233 . ? 1_555 ? 5 AC1 13 SER A 69 ? SER A 237 . ? 1_555 ? 6 AC1 13 ARG A 106 ? ARG A 274 . ? 1_555 ? 7 AC1 13 SER A 107 ? SER A 275 . ? 1_555 ? 8 AC1 13 SER A 110 ? SER A 278 . ? 1_555 ? 9 AC1 13 TRP A 118 ? TRP A 286 . ? 1_555 ? 10 AC1 13 VAL A 132 ? VAL A 300 . ? 1_555 ? 11 AC1 13 HIS A 137 ? HIS A 305 . ? 1_555 ? 12 AC1 13 HIS A 229 ? HIS A 397 . ? 1_555 ? 13 AC1 13 HOH C . ? HOH A 628 . ? 1_555 ? # _atom_sites.entry_id 5YT2 _atom_sites.fract_transf_matrix[1][1] 0.022439 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019393 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007548 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 118 118 ASP ASP A . n A 1 2 SER 2 119 119 SER SER A . n A 1 3 LEU 3 120 120 LEU LEU A . n A 1 4 ARG 4 121 121 ARG ARG A . n A 1 5 PRO 5 122 122 PRO PRO A . n A 1 6 LYS 6 123 123 LYS LYS A . n A 1 7 LEU 7 124 124 LEU LEU A . n A 1 8 SER 8 125 125 SER SER A . n A 1 9 GLU 9 126 126 GLU GLU A . n A 1 10 GLU 10 127 127 GLU GLU A . n A 1 11 GLN 11 128 128 GLN GLN A . n A 1 12 GLN 12 129 129 GLN GLN A . n A 1 13 ARG 13 130 130 ARG ARG A . n A 1 14 ILE 14 131 131 ILE ILE A . n A 1 15 ILE 15 132 132 ILE ILE A . n A 1 16 ALA 16 133 133 ALA ALA A . n A 1 17 ILE 17 134 134 ILE ILE A . n A 1 18 LEU 18 135 135 LEU LEU A . n A 1 19 LEU 19 136 136 LEU LEU A . n A 1 20 ASP 20 137 137 ASP ASP A . n A 1 21 ALA 21 138 138 ALA ALA A . n A 1 22 HIS 22 139 139 HIS HIS A . n A 1 23 HIS 23 140 140 HIS HIS A . n A 1 24 LYS 24 141 141 LYS LYS A . n A 1 25 THR 25 142 142 THR THR A . n A 1 26 TYR 26 143 143 TYR TYR A . n A 1 27 ASP 27 144 144 ASP ASP A . n A 1 28 PRO 28 145 145 PRO PRO A . n A 1 29 THR 29 146 146 THR THR A . n A 1 30 TYR 30 147 147 TYR TYR A . n A 1 31 SER 31 148 148 SER SER A . n A 1 32 ASP 32 149 149 ASP ASP A . n A 1 33 PHE 33 150 150 PHE PHE A . n A 1 34 CYS 34 151 151 CYS CYS A . n A 1 35 GLN 35 152 152 GLN GLN A . n A 1 36 PHE 36 153 153 PHE PHE A . n A 1 37 ARG 37 154 154 ARG ARG A . n A 1 38 PRO 38 155 155 PRO PRO A . n A 1 39 PRO 39 156 156 PRO PRO A . n A 1 40 VAL 40 157 157 VAL VAL A . n A 1 41 ARG 41 158 158 ARG ARG A . n A 1 42 VAL 42 159 159 VAL VAL A . n A 1 43 ASN 43 160 160 ASN ASN A . n A 1 44 ASP 44 161 161 ASP ASP A . n A 1 45 GLY 45 162 162 GLY GLY A . n A 1 46 GLY 46 163 163 GLY GLY A . n A 1 47 GLY 47 164 164 GLY GLY A . n A 1 48 SER 48 216 216 SER SER A . n A 1 49 VAL 49 217 217 VAL VAL A . n A 1 50 THR 50 218 218 THR THR A . n A 1 51 LEU 51 219 219 LEU LEU A . n A 1 52 GLU 52 220 220 GLU GLU A . n A 1 53 LEU 53 221 221 LEU LEU A . n A 1 54 SER 54 222 222 SER SER A . n A 1 55 GLN 55 223 223 GLN GLN A . n A 1 56 LEU 56 224 224 LEU LEU A . n A 1 57 SER 57 225 225 SER SER A . n A 1 58 MET 58 226 226 MET MET A . n A 1 59 LEU 59 227 227 LEU LEU A . n A 1 60 PRO 60 228 228 PRO PRO A . n A 1 61 HIS 61 229 229 HIS HIS A . n A 1 62 LEU 62 230 230 LEU LEU A . n A 1 63 ALA 63 231 231 ALA ALA A . n A 1 64 ASP 64 232 232 ASP ASP A . n A 1 65 LEU 65 233 233 LEU LEU A . n A 1 66 VAL 66 234 234 VAL VAL A . n A 1 67 SER 67 235 235 SER SER A . n A 1 68 TYR 68 236 236 TYR TYR A . n A 1 69 SER 69 237 237 SER SER A . n A 1 70 ILE 70 238 238 ILE ILE A . n A 1 71 GLN 71 239 239 GLN GLN A . n A 1 72 LYS 72 240 240 LYS LYS A . n A 1 73 VAL 73 241 241 VAL VAL A . n A 1 74 ILE 74 242 242 ILE ILE A . n A 1 75 GLY 75 243 243 GLY GLY A . n A 1 76 PHE 76 244 244 PHE PHE A . n A 1 77 ALA 77 245 245 ALA ALA A . n A 1 78 LYS 78 246 246 LYS LYS A . n A 1 79 MET 79 247 247 MET MET A . n A 1 80 ILE 80 248 248 ILE ILE A . n A 1 81 PRO 81 249 249 PRO PRO A . n A 1 82 GLY 82 250 250 GLY GLY A . n A 1 83 PHE 83 251 251 PHE PHE A . n A 1 84 ARG 84 252 252 ARG ARG A . n A 1 85 ASP 85 253 253 ASP ASP A . n A 1 86 LEU 86 254 254 LEU LEU A . n A 1 87 THR 87 255 255 THR THR A . n A 1 88 SER 88 256 256 SER SER A . n A 1 89 GLU 89 257 257 GLU GLU A . n A 1 90 ASP 90 258 258 ASP ASP A . n A 1 91 GLN 91 259 259 GLN GLN A . n A 1 92 ILE 92 260 260 ILE ILE A . n A 1 93 VAL 93 261 261 VAL VAL A . n A 1 94 LEU 94 262 262 LEU LEU A . n A 1 95 LEU 95 263 263 LEU LEU A . n A 1 96 LYS 96 264 264 LYS LYS A . n A 1 97 SER 97 265 265 SER SER A . n A 1 98 SER 98 266 266 SER SER A . n A 1 99 ALA 99 267 267 ALA ALA A . n A 1 100 ILE 100 268 268 ILE ILE A . n A 1 101 GLU 101 269 269 GLU GLU A . n A 1 102 VAL 102 270 270 VAL VAL A . n A 1 103 ILE 103 271 271 ILE ILE A . n A 1 104 MET 104 272 272 MET MET A . n A 1 105 LEU 105 273 273 LEU LEU A . n A 1 106 ARG 106 274 274 ARG ARG A . n A 1 107 SER 107 275 275 SER SER A . n A 1 108 ASN 108 276 276 ASN ASN A . n A 1 109 GLU 109 277 277 GLU GLU A . n A 1 110 SER 110 278 278 SER SER A . n A 1 111 PHE 111 279 279 PHE PHE A . n A 1 112 THR 112 280 280 THR THR A . n A 1 113 MET 113 281 281 MET MET A . n A 1 114 ASP 114 282 282 ASP ASP A . n A 1 115 ASP 115 283 283 ASP ASP A . n A 1 116 MET 116 284 284 MET MET A . n A 1 117 SER 117 285 285 SER SER A . n A 1 118 TRP 118 286 286 TRP TRP A . n A 1 119 THR 119 287 287 THR THR A . n A 1 120 CYS 120 288 288 CYS CYS A . n A 1 121 GLY 121 289 289 GLY GLY A . n A 1 122 ASN 122 290 290 ASN ASN A . n A 1 123 GLN 123 291 291 GLN GLN A . n A 1 124 ASP 124 292 292 ASP ASP A . n A 1 125 TYR 125 293 293 TYR TYR A . n A 1 126 LYS 126 294 294 LYS LYS A . n A 1 127 TYR 127 295 295 TYR TYR A . n A 1 128 ARG 128 296 296 ARG ARG A . n A 1 129 VAL 129 297 297 VAL VAL A . n A 1 130 SER 130 298 298 SER SER A . n A 1 131 ASP 131 299 299 ASP ASP A . n A 1 132 VAL 132 300 300 VAL VAL A . n A 1 133 THR 133 301 301 THR THR A . n A 1 134 LYS 134 302 302 LYS LYS A . n A 1 135 ALA 135 303 303 ALA ALA A . n A 1 136 GLY 136 304 304 GLY GLY A . n A 1 137 HIS 137 305 305 HIS HIS A . n A 1 138 SER 138 306 306 SER SER A . n A 1 139 LEU 139 307 307 LEU LEU A . n A 1 140 GLU 140 308 308 GLU GLU A . n A 1 141 LEU 141 309 309 LEU LEU A . n A 1 142 ILE 142 310 310 ILE ILE A . n A 1 143 GLU 143 311 311 GLU GLU A . n A 1 144 PRO 144 312 312 PRO PRO A . n A 1 145 LEU 145 313 313 LEU LEU A . n A 1 146 ILE 146 314 314 ILE ILE A . n A 1 147 LYS 147 315 315 LYS LYS A . n A 1 148 PHE 148 316 316 PHE PHE A . n A 1 149 GLN 149 317 317 GLN GLN A . n A 1 150 VAL 150 318 318 VAL VAL A . n A 1 151 GLY 151 319 319 GLY GLY A . n A 1 152 LEU 152 320 320 LEU LEU A . n A 1 153 LYS 153 321 321 LYS LYS A . n A 1 154 LYS 154 322 322 LYS LYS A . n A 1 155 LEU 155 323 323 LEU LEU A . n A 1 156 ASN 156 324 324 ASN ASN A . n A 1 157 LEU 157 325 325 LEU LEU A . n A 1 158 HIS 158 326 326 HIS HIS A . n A 1 159 GLU 159 327 327 GLU GLU A . n A 1 160 GLU 160 328 328 GLU GLU A . n A 1 161 GLU 161 329 329 GLU GLU A . n A 1 162 HIS 162 330 330 HIS HIS A . n A 1 163 VAL 163 331 331 VAL VAL A . n A 1 164 LEU 164 332 332 LEU LEU A . n A 1 165 LEU 165 333 333 LEU LEU A . n A 1 166 MET 166 334 334 MET MET A . n A 1 167 ALA 167 335 335 ALA ALA A . n A 1 168 ILE 168 336 336 ILE ILE A . n A 1 169 CYS 169 337 337 CYS CYS A . n A 1 170 ILE 170 338 338 ILE ILE A . n A 1 171 VAL 171 339 339 VAL VAL A . n A 1 172 SER 172 340 340 SER SER A . n A 1 173 PRO 173 341 341 PRO PRO A . n A 1 174 ASP 174 342 342 ASP ASP A . n A 1 175 ARG 175 343 343 ARG ARG A . n A 1 176 PRO 176 344 344 PRO PRO A . n A 1 177 GLY 177 345 345 GLY GLY A . n A 1 178 VAL 178 346 346 VAL VAL A . n A 1 179 GLN 179 347 347 GLN GLN A . n A 1 180 ASP 180 348 348 ASP ASP A . n A 1 181 ALA 181 349 349 ALA ALA A . n A 1 182 ALA 182 350 350 ALA ALA A . n A 1 183 LEU 183 351 351 LEU LEU A . n A 1 184 ILE 184 352 352 ILE ILE A . n A 1 185 GLU 185 353 353 GLU GLU A . n A 1 186 ALA 186 354 354 ALA ALA A . n A 1 187 ILE 187 355 355 ILE ILE A . n A 1 188 GLN 188 356 356 GLN GLN A . n A 1 189 ASP 189 357 357 ASP ASP A . n A 1 190 ARG 190 358 358 ARG ARG A . n A 1 191 LEU 191 359 359 LEU LEU A . n A 1 192 SER 192 360 360 SER SER A . n A 1 193 ASN 193 361 361 ASN ASN A . n A 1 194 THR 194 362 362 THR THR A . n A 1 195 LEU 195 363 363 LEU LEU A . n A 1 196 GLN 196 364 364 GLN GLN A . n A 1 197 THR 197 365 365 THR THR A . n A 1 198 TYR 198 366 366 TYR TYR A . n A 1 199 ILE 199 367 367 ILE ILE A . n A 1 200 ARG 200 368 368 ARG ARG A . n A 1 201 CYS 201 369 369 CYS CYS A . n A 1 202 ARG 202 370 370 ARG ARG A . n A 1 203 HIS 203 371 371 HIS HIS A . n A 1 204 PRO 204 372 372 PRO PRO A . n A 1 205 PRO 205 373 373 PRO PRO A . n A 1 206 PRO 206 374 374 PRO PRO A . n A 1 207 GLY 207 375 375 GLY GLY A . n A 1 208 SER 208 376 376 SER SER A . n A 1 209 HIS 209 377 377 HIS HIS A . n A 1 210 LEU 210 378 378 LEU LEU A . n A 1 211 LEU 211 379 379 LEU LEU A . n A 1 212 TYR 212 380 380 TYR TYR A . n A 1 213 ALA 213 381 381 ALA ALA A . n A 1 214 LYS 214 382 382 LYS LYS A . n A 1 215 MET 215 383 383 MET MET A . n A 1 216 ILE 216 384 384 ILE ILE A . n A 1 217 GLN 217 385 385 GLN GLN A . n A 1 218 LYS 218 386 386 LYS LYS A . n A 1 219 LEU 219 387 387 LEU LEU A . n A 1 220 ALA 220 388 388 ALA ALA A . n A 1 221 ASP 221 389 389 ASP ASP A . n A 1 222 LEU 222 390 390 LEU LEU A . n A 1 223 ARG 223 391 391 ARG ARG A . n A 1 224 SER 224 392 392 SER SER A . n A 1 225 LEU 225 393 393 LEU LEU A . n A 1 226 ASN 226 394 394 ASN ASN A . n A 1 227 GLU 227 395 395 GLU GLU A . n A 1 228 GLU 228 396 396 GLU GLU A . n A 1 229 HIS 229 397 397 HIS HIS A . n A 1 230 SER 230 398 398 SER SER A . n A 1 231 LYS 231 399 399 LYS LYS A . n A 1 232 GLN 232 400 400 GLN GLN A . n A 1 233 TYR 233 401 401 TYR TYR A . n A 1 234 ARG 234 402 402 ARG ARG A . n A 1 235 CYS 235 403 403 CYS CYS A . n A 1 236 LEU 236 404 404 LEU LEU A . n A 1 237 SER 237 405 405 SER SER A . n A 1 238 PHE 238 406 406 PHE PHE A . n A 1 239 GLN 239 407 407 GLN GLN A . n A 1 240 PRO 240 408 408 PRO PRO A . n A 1 241 GLU 241 409 409 GLU GLU A . n A 1 242 CYS 242 410 410 CYS CYS A . n A 1 243 SER 243 411 411 SER SER A . n A 1 244 MET 244 412 412 MET MET A . n A 1 245 LYS 245 413 413 LYS LYS A . n A 1 246 LEU 246 414 414 LEU LEU A . n A 1 247 THR 247 415 415 THR THR A . n A 1 248 PRO 248 416 416 PRO PRO A . n A 1 249 LEU 249 417 417 LEU LEU A . n A 1 250 VAL 250 418 418 VAL VAL A . n A 1 251 LEU 251 419 419 LEU LEU A . n A 1 252 GLU 252 420 420 GLU GLU A . n A 1 253 VAL 253 421 421 VAL VAL A . n A 1 254 PHE 254 422 422 PHE PHE A . n A 1 255 GLY 255 423 423 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 90O 1 501 0 90O MMM A . C 3 HOH 1 601 78 HOH HOH A . C 3 HOH 2 602 126 HOH HOH A . C 3 HOH 3 603 119 HOH HOH A . C 3 HOH 4 604 98 HOH HOH A . C 3 HOH 5 605 151 HOH HOH A . C 3 HOH 6 606 27 HOH HOH A . C 3 HOH 7 607 21 HOH HOH A . C 3 HOH 8 608 63 HOH HOH A . C 3 HOH 9 609 43 HOH HOH A . C 3 HOH 10 610 96 HOH HOH A . C 3 HOH 11 611 100 HOH HOH A . C 3 HOH 12 612 86 HOH HOH A . C 3 HOH 13 613 139 HOH HOH A . C 3 HOH 14 614 51 HOH HOH A . C 3 HOH 15 615 60 HOH HOH A . C 3 HOH 16 616 14 HOH HOH A . C 3 HOH 17 617 99 HOH HOH A . C 3 HOH 18 618 117 HOH HOH A . C 3 HOH 19 619 4 HOH HOH A . C 3 HOH 20 620 49 HOH HOH A . C 3 HOH 21 621 22 HOH HOH A . C 3 HOH 22 622 26 HOH HOH A . C 3 HOH 23 623 41 HOH HOH A . C 3 HOH 24 624 34 HOH HOH A . C 3 HOH 25 625 128 HOH HOH A . C 3 HOH 26 626 97 HOH HOH A . C 3 HOH 27 627 9 HOH HOH A . C 3 HOH 28 628 2 HOH HOH A . C 3 HOH 29 629 122 HOH HOH A . C 3 HOH 30 630 54 HOH HOH A . C 3 HOH 31 631 50 HOH HOH A . C 3 HOH 32 632 64 HOH HOH A . C 3 HOH 33 633 109 HOH HOH A . C 3 HOH 34 634 8 HOH HOH A . C 3 HOH 35 635 80 HOH HOH A . C 3 HOH 36 636 116 HOH HOH A . C 3 HOH 37 637 70 HOH HOH A . C 3 HOH 38 638 81 HOH HOH A . C 3 HOH 39 639 37 HOH HOH A . C 3 HOH 40 640 89 HOH HOH A . C 3 HOH 41 641 17 HOH HOH A . C 3 HOH 42 642 79 HOH HOH A . C 3 HOH 43 643 52 HOH HOH A . C 3 HOH 44 644 102 HOH HOH A . C 3 HOH 45 645 57 HOH HOH A . C 3 HOH 46 646 146 HOH HOH A . C 3 HOH 47 647 123 HOH HOH A . C 3 HOH 48 648 56 HOH HOH A . C 3 HOH 49 649 32 HOH HOH A . C 3 HOH 50 650 74 HOH HOH A . C 3 HOH 51 651 55 HOH HOH A . C 3 HOH 52 652 61 HOH HOH A . C 3 HOH 53 653 40 HOH HOH A . C 3 HOH 54 654 107 HOH HOH A . C 3 HOH 55 655 11 HOH HOH A . C 3 HOH 56 656 48 HOH HOH A . C 3 HOH 57 657 141 HOH HOH A . C 3 HOH 58 658 65 HOH HOH A . C 3 HOH 59 659 30 HOH HOH A . C 3 HOH 60 660 130 HOH HOH A . C 3 HOH 61 661 47 HOH HOH A . C 3 HOH 62 662 108 HOH HOH A . C 3 HOH 63 663 75 HOH HOH A . C 3 HOH 64 664 83 HOH HOH A . C 3 HOH 65 665 12 HOH HOH A . C 3 HOH 66 666 3 HOH HOH A . C 3 HOH 67 667 29 HOH HOH A . C 3 HOH 68 668 33 HOH HOH A . C 3 HOH 69 669 10 HOH HOH A . C 3 HOH 70 670 77 HOH HOH A . C 3 HOH 71 671 101 HOH HOH A . C 3 HOH 72 672 1 HOH HOH A . C 3 HOH 73 673 103 HOH HOH A . C 3 HOH 74 674 23 HOH HOH A . C 3 HOH 75 675 28 HOH HOH A . C 3 HOH 76 676 18 HOH HOH A . C 3 HOH 77 677 16 HOH HOH A . C 3 HOH 78 678 114 HOH HOH A . C 3 HOH 79 679 20 HOH HOH A . C 3 HOH 80 680 6 HOH HOH A . C 3 HOH 81 681 36 HOH HOH A . C 3 HOH 82 682 71 HOH HOH A . C 3 HOH 83 683 147 HOH HOH A . C 3 HOH 84 684 44 HOH HOH A . C 3 HOH 85 685 138 HOH HOH A . C 3 HOH 86 686 39 HOH HOH A . C 3 HOH 87 687 69 HOH HOH A . C 3 HOH 88 688 106 HOH HOH A . C 3 HOH 89 689 35 HOH HOH A . C 3 HOH 90 690 92 HOH HOH A . C 3 HOH 91 691 24 HOH HOH A . C 3 HOH 92 692 31 HOH HOH A . C 3 HOH 93 693 68 HOH HOH A . C 3 HOH 94 694 131 HOH HOH A . C 3 HOH 95 695 15 HOH HOH A . C 3 HOH 96 696 53 HOH HOH A . C 3 HOH 97 697 62 HOH HOH A . C 3 HOH 98 698 42 HOH HOH A . C 3 HOH 99 699 88 HOH HOH A . C 3 HOH 100 700 66 HOH HOH A . C 3 HOH 101 701 46 HOH HOH A . C 3 HOH 102 702 137 HOH HOH A . C 3 HOH 103 703 124 HOH HOH A . C 3 HOH 104 704 94 HOH HOH A . C 3 HOH 105 705 13 HOH HOH A . C 3 HOH 106 706 95 HOH HOH A . C 3 HOH 107 707 120 HOH HOH A . C 3 HOH 108 708 82 HOH HOH A . C 3 HOH 109 709 19 HOH HOH A . C 3 HOH 110 710 93 HOH HOH A . C 3 HOH 111 711 132 HOH HOH A . C 3 HOH 112 712 134 HOH HOH A . C 3 HOH 113 713 67 HOH HOH A . C 3 HOH 114 714 121 HOH HOH A . C 3 HOH 115 715 73 HOH HOH A . C 3 HOH 116 716 25 HOH HOH A . C 3 HOH 117 717 84 HOH HOH A . C 3 HOH 118 718 145 HOH HOH A . C 3 HOH 119 719 7 HOH HOH A . C 3 HOH 120 720 58 HOH HOH A . C 3 HOH 121 721 129 HOH HOH A . C 3 HOH 122 722 59 HOH HOH A . C 3 HOH 123 723 136 HOH HOH A . C 3 HOH 124 724 105 HOH HOH A . C 3 HOH 125 725 143 HOH HOH A . C 3 HOH 126 726 133 HOH HOH A . C 3 HOH 127 727 45 HOH HOH A . C 3 HOH 128 728 148 HOH HOH A . C 3 HOH 129 729 90 HOH HOH A . C 3 HOH 130 730 144 HOH HOH A . C 3 HOH 131 731 153 HOH HOH A . C 3 HOH 132 732 140 HOH HOH A . C 3 HOH 133 733 38 HOH HOH A . C 3 HOH 134 734 111 HOH HOH A . C 3 HOH 135 735 85 HOH HOH A . C 3 HOH 136 736 112 HOH HOH A . C 3 HOH 137 737 142 HOH HOH A . C 3 HOH 138 738 127 HOH HOH A . C 3 HOH 139 739 152 HOH HOH A . C 3 HOH 140 740 72 HOH HOH A . C 3 HOH 141 741 76 HOH HOH A . C 3 HOH 142 742 113 HOH HOH A . C 3 HOH 143 743 104 HOH HOH A . C 3 HOH 144 744 135 HOH HOH A . C 3 HOH 145 745 149 HOH HOH A . C 3 HOH 146 746 125 HOH HOH A . C 3 HOH 147 747 118 HOH HOH A . C 3 HOH 148 748 115 HOH HOH A . C 3 HOH 149 749 87 HOH HOH A . C 3 HOH 150 750 91 HOH HOH A . C 3 HOH 151 751 150 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 11940 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-04-11 2 'Structure model' 1 1 2018-04-18 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.2.0019 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.20 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? 11.0.05 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 246 ? ? O A HOH 601 ? ? 2.08 2 1 OE2 A GLU 308 ? B O A HOH 602 ? ? 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 369 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 369 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.687 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.125 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A ASN 290 ? ? CA A ASN 290 ? ? C A ASN 290 ? ? 84.73 111.00 -26.27 2.70 N 2 1 CA A LEU 378 ? ? CB A LEU 378 ? ? CG A LEU 378 ? ? 130.48 115.30 15.18 2.30 N 3 1 CB A LEU 390 ? ? CG A LEU 390 ? ? CD1 A LEU 390 ? ? 121.47 111.00 10.47 1.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 119 ? ? 44.27 74.48 2 1 ASP A 283 ? ? -140.03 23.27 3 1 ASN A 290 ? ? 129.26 -117.41 4 1 ASN A 290 ? ? 129.26 -116.58 5 1 GLN A 291 ? A -157.10 -50.15 6 1 GLN A 291 ? B -166.76 -23.07 7 1 ASP A 342 ? ? -96.36 57.29 8 1 GLN A 347 ? B -91.59 -69.01 9 1 ASP A 348 ? ? -108.81 68.85 10 1 PRO A 373 ? ? -31.29 -72.62 11 1 SER A 376 ? ? -80.93 32.65 12 1 LEU A 414 ? ? -98.54 -154.32 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 CYS A 288 ? ? GLY A 289 ? ? 34.96 2 1 GLY A 289 ? ? ASN A 290 ? ? 45.59 3 1 ASN A 290 ? ? GLN A 291 ? B 147.27 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 GLY _pdbx_validate_polymer_linkage.auth_seq_id_1 164 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 SER _pdbx_validate_polymer_linkage.auth_seq_id_2 216 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 3.52 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 90O C2 C N N 1 90O C3 C N N 2 90O C4 C N S 3 90O C5 C N R 4 90O C6 C N N 5 90O O35 O N N 6 90O C34 C N N 7 90O C33 C N N 8 90O C32 C N N 9 90O C27 C N S 10 90O C26 C N R 11 90O O31 O N N 12 90O C25 C N N 13 90O C28 C N R 14 90O O30 O N N 15 90O C29 C N N 16 90O C24 C N N 17 90O C23 C N N 18 90O C22 C N N 19 90O C7 C N N 20 90O C8 C N N 21 90O C9 C N R 22 90O C10 C N N 23 90O C1 C N N 24 90O C12 C N R 25 90O C14 C N N 26 90O C15 C N N 27 90O C16 C N N 28 90O C17 C N N 29 90O C18 C N N 30 90O O21 O N N 31 90O C20 C N N 32 90O C19 C N N 33 90O H1 H N N 34 90O H2 H N N 35 90O H3 H N N 36 90O H4 H N N 37 90O H5 H N N 38 90O H6 H N N 39 90O H7 H N N 40 90O H8 H N N 41 90O H9 H N N 42 90O H10 H N N 43 90O H11 H N N 44 90O H12 H N N 45 90O H13 H N N 46 90O H14 H N N 47 90O H15 H N N 48 90O H16 H N N 49 90O H17 H N N 50 90O H18 H N N 51 90O H19 H N N 52 90O H20 H N N 53 90O H21 H N N 54 90O H22 H N N 55 90O H23 H N N 56 90O H24 H N N 57 90O H25 H N N 58 90O H26 H N N 59 90O H27 H N N 60 90O H28 H N N 61 90O H29 H N N 62 90O H30 H N N 63 90O H31 H N N 64 90O H32 H N N 65 90O H33 H N N 66 90O H34 H N N 67 90O H35 H N N 68 90O H36 H N N 69 90O H37 H N N 70 90O H38 H N N 71 90O H39 H N N 72 90O H40 H N N 73 90O H41 H N N 74 90O H42 H N N 75 90O H43 H N N 76 90O H44 H N N 77 90O H45 H N N 78 90O H46 H N N 79 90O H47 H N N 80 90O H48 H N N 81 ALA N N N N 82 ALA CA C N S 83 ALA C C N N 84 ALA O O N N 85 ALA CB C N N 86 ALA OXT O N N 87 ALA H H N N 88 ALA H2 H N N 89 ALA HA H N N 90 ALA HB1 H N N 91 ALA HB2 H N N 92 ALA HB3 H N N 93 ALA HXT H N N 94 ARG N N N N 95 ARG CA C N S 96 ARG C C N N 97 ARG O O N N 98 ARG CB C N N 99 ARG CG C N N 100 ARG CD C N N 101 ARG NE N N N 102 ARG CZ C N N 103 ARG NH1 N N N 104 ARG NH2 N N N 105 ARG OXT O N N 106 ARG H H N N 107 ARG H2 H N N 108 ARG HA H N N 109 ARG HB2 H N N 110 ARG HB3 H N N 111 ARG HG2 H N N 112 ARG HG3 H N N 113 ARG HD2 H N N 114 ARG HD3 H N N 115 ARG HE H N N 116 ARG HH11 H N N 117 ARG HH12 H N N 118 ARG HH21 H N N 119 ARG HH22 H N N 120 ARG HXT H N N 121 ASN N N N N 122 ASN CA C N S 123 ASN C C N N 124 ASN O O N N 125 ASN CB C N N 126 ASN CG C N N 127 ASN OD1 O N N 128 ASN ND2 N N N 129 ASN OXT O N N 130 ASN H H N N 131 ASN H2 H N N 132 ASN HA H N N 133 ASN HB2 H N N 134 ASN HB3 H N N 135 ASN HD21 H N N 136 ASN HD22 H N N 137 ASN HXT H N N 138 ASP N N N N 139 ASP CA C N S 140 ASP C C N N 141 ASP O O N N 142 ASP CB C N N 143 ASP CG C N N 144 ASP OD1 O N N 145 ASP OD2 O N N 146 ASP OXT O N N 147 ASP H H N N 148 ASP H2 H N N 149 ASP HA H N N 150 ASP HB2 H N N 151 ASP HB3 H N N 152 ASP HD2 H N N 153 ASP HXT H N N 154 CYS N N N N 155 CYS CA C N R 156 CYS C C N N 157 CYS O O N N 158 CYS CB C N N 159 CYS SG S N N 160 CYS OXT O N N 161 CYS H H N N 162 CYS H2 H N N 163 CYS HA H N N 164 CYS HB2 H N N 165 CYS HB3 H N N 166 CYS HG H N N 167 CYS HXT H N N 168 GLN N N N N 169 GLN CA C N S 170 GLN C C N N 171 GLN O O N N 172 GLN CB C N N 173 GLN CG C N N 174 GLN CD C N N 175 GLN OE1 O N N 176 GLN NE2 N N N 177 GLN OXT O N N 178 GLN H H N N 179 GLN H2 H N N 180 GLN HA H N N 181 GLN HB2 H N N 182 GLN HB3 H N N 183 GLN HG2 H N N 184 GLN HG3 H N N 185 GLN HE21 H N N 186 GLN HE22 H N N 187 GLN HXT H N N 188 GLU N N N N 189 GLU CA C N S 190 GLU C C N N 191 GLU O O N N 192 GLU CB C N N 193 GLU CG C N N 194 GLU CD C N N 195 GLU OE1 O N N 196 GLU OE2 O N N 197 GLU OXT O N N 198 GLU H H N N 199 GLU H2 H N N 200 GLU HA H N N 201 GLU HB2 H N N 202 GLU HB3 H N N 203 GLU HG2 H N N 204 GLU HG3 H N N 205 GLU HE2 H N N 206 GLU HXT H N N 207 GLY N N N N 208 GLY CA C N N 209 GLY C C N N 210 GLY O O N N 211 GLY OXT O N N 212 GLY H H N N 213 GLY H2 H N N 214 GLY HA2 H N N 215 GLY HA3 H N N 216 GLY HXT H N N 217 HIS N N N N 218 HIS CA C N S 219 HIS C C N N 220 HIS O O N N 221 HIS CB C N N 222 HIS CG C Y N 223 HIS ND1 N Y N 224 HIS CD2 C Y N 225 HIS CE1 C Y N 226 HIS NE2 N Y N 227 HIS OXT O N N 228 HIS H H N N 229 HIS H2 H N N 230 HIS HA H N N 231 HIS HB2 H N N 232 HIS HB3 H N N 233 HIS HD1 H N N 234 HIS HD2 H N N 235 HIS HE1 H N N 236 HIS HE2 H N N 237 HIS HXT H N N 238 HOH O O N N 239 HOH H1 H N N 240 HOH H2 H N N 241 ILE N N N N 242 ILE CA C N S 243 ILE C C N N 244 ILE O O N N 245 ILE CB C N S 246 ILE CG1 C N N 247 ILE CG2 C N N 248 ILE CD1 C N N 249 ILE OXT O N N 250 ILE H H N N 251 ILE H2 H N N 252 ILE HA H N N 253 ILE HB H N N 254 ILE HG12 H N N 255 ILE HG13 H N N 256 ILE HG21 H N N 257 ILE HG22 H N N 258 ILE HG23 H N N 259 ILE HD11 H N N 260 ILE HD12 H N N 261 ILE HD13 H N N 262 ILE HXT H N N 263 LEU N N N N 264 LEU CA C N S 265 LEU C C N N 266 LEU O O N N 267 LEU CB C N N 268 LEU CG C N N 269 LEU CD1 C N N 270 LEU CD2 C N N 271 LEU OXT O N N 272 LEU H H N N 273 LEU H2 H N N 274 LEU HA H N N 275 LEU HB2 H N N 276 LEU HB3 H N N 277 LEU HG H N N 278 LEU HD11 H N N 279 LEU HD12 H N N 280 LEU HD13 H N N 281 LEU HD21 H N N 282 LEU HD22 H N N 283 LEU HD23 H N N 284 LEU HXT H N N 285 LYS N N N N 286 LYS CA C N S 287 LYS C C N N 288 LYS O O N N 289 LYS CB C N N 290 LYS CG C N N 291 LYS CD C N N 292 LYS CE C N N 293 LYS NZ N N N 294 LYS OXT O N N 295 LYS H H N N 296 LYS H2 H N N 297 LYS HA H N N 298 LYS HB2 H N N 299 LYS HB3 H N N 300 LYS HG2 H N N 301 LYS HG3 H N N 302 LYS HD2 H N N 303 LYS HD3 H N N 304 LYS HE2 H N N 305 LYS HE3 H N N 306 LYS HZ1 H N N 307 LYS HZ2 H N N 308 LYS HZ3 H N N 309 LYS HXT H N N 310 MET N N N N 311 MET CA C N S 312 MET C C N N 313 MET O O N N 314 MET CB C N N 315 MET CG C N N 316 MET SD S N N 317 MET CE C N N 318 MET OXT O N N 319 MET H H N N 320 MET H2 H N N 321 MET HA H N N 322 MET HB2 H N N 323 MET HB3 H N N 324 MET HG2 H N N 325 MET HG3 H N N 326 MET HE1 H N N 327 MET HE2 H N N 328 MET HE3 H N N 329 MET HXT H N N 330 PHE N N N N 331 PHE CA C N S 332 PHE C C N N 333 PHE O O N N 334 PHE CB C N N 335 PHE CG C Y N 336 PHE CD1 C Y N 337 PHE CD2 C Y N 338 PHE CE1 C Y N 339 PHE CE2 C Y N 340 PHE CZ C Y N 341 PHE OXT O N N 342 PHE H H N N 343 PHE H2 H N N 344 PHE HA H N N 345 PHE HB2 H N N 346 PHE HB3 H N N 347 PHE HD1 H N N 348 PHE HD2 H N N 349 PHE HE1 H N N 350 PHE HE2 H N N 351 PHE HZ H N N 352 PHE HXT H N N 353 PRO N N N N 354 PRO CA C N S 355 PRO C C N N 356 PRO O O N N 357 PRO CB C N N 358 PRO CG C N N 359 PRO CD C N N 360 PRO OXT O N N 361 PRO H H N N 362 PRO HA H N N 363 PRO HB2 H N N 364 PRO HB3 H N N 365 PRO HG2 H N N 366 PRO HG3 H N N 367 PRO HD2 H N N 368 PRO HD3 H N N 369 PRO HXT H N N 370 SER N N N N 371 SER CA C N S 372 SER C C N N 373 SER O O N N 374 SER CB C N N 375 SER OG O N N 376 SER OXT O N N 377 SER H H N N 378 SER H2 H N N 379 SER HA H N N 380 SER HB2 H N N 381 SER HB3 H N N 382 SER HG H N N 383 SER HXT H N N 384 THR N N N N 385 THR CA C N S 386 THR C C N N 387 THR O O N N 388 THR CB C N R 389 THR OG1 O N N 390 THR CG2 C N N 391 THR OXT O N N 392 THR H H N N 393 THR H2 H N N 394 THR HA H N N 395 THR HB H N N 396 THR HG1 H N N 397 THR HG21 H N N 398 THR HG22 H N N 399 THR HG23 H N N 400 THR HXT H N N 401 TRP N N N N 402 TRP CA C N S 403 TRP C C N N 404 TRP O O N N 405 TRP CB C N N 406 TRP CG C Y N 407 TRP CD1 C Y N 408 TRP CD2 C Y N 409 TRP NE1 N Y N 410 TRP CE2 C Y N 411 TRP CE3 C Y N 412 TRP CZ2 C Y N 413 TRP CZ3 C Y N 414 TRP CH2 C Y N 415 TRP OXT O N N 416 TRP H H N N 417 TRP H2 H N N 418 TRP HA H N N 419 TRP HB2 H N N 420 TRP HB3 H N N 421 TRP HD1 H N N 422 TRP HE1 H N N 423 TRP HE3 H N N 424 TRP HZ2 H N N 425 TRP HZ3 H N N 426 TRP HH2 H N N 427 TRP HXT H N N 428 TYR N N N N 429 TYR CA C N S 430 TYR C C N N 431 TYR O O N N 432 TYR CB C N N 433 TYR CG C Y N 434 TYR CD1 C Y N 435 TYR CD2 C Y N 436 TYR CE1 C Y N 437 TYR CE2 C Y N 438 TYR CZ C Y N 439 TYR OH O N N 440 TYR OXT O N N 441 TYR H H N N 442 TYR H2 H N N 443 TYR HA H N N 444 TYR HB2 H N N 445 TYR HB3 H N N 446 TYR HD1 H N N 447 TYR HD2 H N N 448 TYR HE1 H N N 449 TYR HE2 H N N 450 TYR HH H N N 451 TYR HXT H N N 452 VAL N N N N 453 VAL CA C N S 454 VAL C C N N 455 VAL O O N N 456 VAL CB C N N 457 VAL CG1 C N N 458 VAL CG2 C N N 459 VAL OXT O N N 460 VAL H H N N 461 VAL H2 H N N 462 VAL HA H N N 463 VAL HB H N N 464 VAL HG11 H N N 465 VAL HG12 H N N 466 VAL HG13 H N N 467 VAL HG21 H N N 468 VAL HG22 H N N 469 VAL HG23 H N N 470 VAL HXT H N N 471 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 90O C1 C2 sing N N 1 90O C1 C6 sing N N 2 90O C2 C3 doub N N 3 90O C10 C5 sing N N 4 90O C20 C18 sing N N 5 90O C6 C5 sing N N 6 90O C3 C22 sing N N 7 90O C3 C4 sing N N 8 90O C22 C23 doub N E 9 90O C29 C28 sing N N 10 90O C29 C24 doub N N 11 90O C5 C4 sing N N 12 90O C5 C9 sing N N 13 90O C28 C27 sing N N 14 90O C28 O30 sing N N 15 90O C4 C7 sing N N 16 90O C32 C27 sing N N 17 90O C32 C33 sing N N 18 90O C23 C24 sing N N 19 90O C18 C19 sing N N 20 90O C18 C17 sing N N 21 90O C18 O21 sing N N 22 90O C24 C25 sing N N 23 90O C16 C17 sing N N 24 90O C16 C15 sing N N 25 90O C27 C26 sing N N 26 90O C34 C33 sing N N 27 90O C34 O35 sing N N 28 90O C9 C12 sing N N 29 90O C9 C8 sing N N 30 90O C12 C15 sing N N 31 90O C12 C14 sing N N 32 90O C7 C8 sing N N 33 90O C25 C26 sing N N 34 90O C26 O31 sing N N 35 90O C2 H1 sing N N 36 90O C4 H2 sing N N 37 90O C6 H3 sing N N 38 90O C6 H4 sing N N 39 90O O35 H5 sing N N 40 90O C34 H6 sing N N 41 90O C34 H7 sing N N 42 90O C33 H8 sing N N 43 90O C33 H9 sing N N 44 90O C32 H10 sing N N 45 90O C32 H11 sing N N 46 90O C27 H12 sing N N 47 90O C26 H13 sing N N 48 90O O31 H14 sing N N 49 90O C25 H15 sing N N 50 90O C25 H16 sing N N 51 90O C28 H17 sing N N 52 90O O30 H18 sing N N 53 90O C29 H19 sing N N 54 90O C23 H20 sing N N 55 90O C22 H21 sing N N 56 90O C7 H22 sing N N 57 90O C7 H23 sing N N 58 90O C8 H24 sing N N 59 90O C8 H25 sing N N 60 90O C9 H26 sing N N 61 90O C10 H27 sing N N 62 90O C10 H28 sing N N 63 90O C10 H29 sing N N 64 90O C1 H30 sing N N 65 90O C1 H31 sing N N 66 90O C12 H32 sing N N 67 90O C14 H33 sing N N 68 90O C14 H34 sing N N 69 90O C14 H35 sing N N 70 90O C15 H36 sing N N 71 90O C15 H37 sing N N 72 90O C16 H38 sing N N 73 90O C16 H39 sing N N 74 90O C17 H40 sing N N 75 90O C17 H41 sing N N 76 90O O21 H42 sing N N 77 90O C20 H43 sing N N 78 90O C20 H44 sing N N 79 90O C20 H45 sing N N 80 90O C19 H46 sing N N 81 90O C19 H47 sing N N 82 90O C19 H48 sing N N 83 ALA N CA sing N N 84 ALA N H sing N N 85 ALA N H2 sing N N 86 ALA CA C sing N N 87 ALA CA CB sing N N 88 ALA CA HA sing N N 89 ALA C O doub N N 90 ALA C OXT sing N N 91 ALA CB HB1 sing N N 92 ALA CB HB2 sing N N 93 ALA CB HB3 sing N N 94 ALA OXT HXT sing N N 95 ARG N CA sing N N 96 ARG N H sing N N 97 ARG N H2 sing N N 98 ARG CA C sing N N 99 ARG CA CB sing N N 100 ARG CA HA sing N N 101 ARG C O doub N N 102 ARG C OXT sing N N 103 ARG CB CG sing N N 104 ARG CB HB2 sing N N 105 ARG CB HB3 sing N N 106 ARG CG CD sing N N 107 ARG CG HG2 sing N N 108 ARG CG HG3 sing N N 109 ARG CD NE sing N N 110 ARG CD HD2 sing N N 111 ARG CD HD3 sing N N 112 ARG NE CZ sing N N 113 ARG NE HE sing N N 114 ARG CZ NH1 sing N N 115 ARG CZ NH2 doub N N 116 ARG NH1 HH11 sing N N 117 ARG NH1 HH12 sing N N 118 ARG NH2 HH21 sing N N 119 ARG NH2 HH22 sing N N 120 ARG OXT HXT sing N N 121 ASN N CA sing N N 122 ASN N H sing N N 123 ASN N H2 sing N N 124 ASN CA C sing N N 125 ASN CA CB sing N N 126 ASN CA HA sing N N 127 ASN C O doub N N 128 ASN C OXT sing N N 129 ASN CB CG sing N N 130 ASN CB HB2 sing N N 131 ASN CB HB3 sing N N 132 ASN CG OD1 doub N N 133 ASN CG ND2 sing N N 134 ASN ND2 HD21 sing N N 135 ASN ND2 HD22 sing N N 136 ASN OXT HXT sing N N 137 ASP N CA sing N N 138 ASP N H sing N N 139 ASP N H2 sing N N 140 ASP CA C sing N N 141 ASP CA CB sing N N 142 ASP CA HA sing N N 143 ASP C O doub N N 144 ASP C OXT sing N N 145 ASP CB CG sing N N 146 ASP CB HB2 sing N N 147 ASP CB HB3 sing N N 148 ASP CG OD1 doub N N 149 ASP CG OD2 sing N N 150 ASP OD2 HD2 sing N N 151 ASP OXT HXT sing N N 152 CYS N CA sing N N 153 CYS N H sing N N 154 CYS N H2 sing N N 155 CYS CA C sing N N 156 CYS CA CB sing N N 157 CYS CA HA sing N N 158 CYS C O doub N N 159 CYS C OXT sing N N 160 CYS CB SG sing N N 161 CYS CB HB2 sing N N 162 CYS CB HB3 sing N N 163 CYS SG HG sing N N 164 CYS OXT HXT sing N N 165 GLN N CA sing N N 166 GLN N H sing N N 167 GLN N H2 sing N N 168 GLN CA C sing N N 169 GLN CA CB sing N N 170 GLN CA HA sing N N 171 GLN C O doub N N 172 GLN C OXT sing N N 173 GLN CB CG sing N N 174 GLN CB HB2 sing N N 175 GLN CB HB3 sing N N 176 GLN CG CD sing N N 177 GLN CG HG2 sing N N 178 GLN CG HG3 sing N N 179 GLN CD OE1 doub N N 180 GLN CD NE2 sing N N 181 GLN NE2 HE21 sing N N 182 GLN NE2 HE22 sing N N 183 GLN OXT HXT sing N N 184 GLU N CA sing N N 185 GLU N H sing N N 186 GLU N H2 sing N N 187 GLU CA C sing N N 188 GLU CA CB sing N N 189 GLU CA HA sing N N 190 GLU C O doub N N 191 GLU C OXT sing N N 192 GLU CB CG sing N N 193 GLU CB HB2 sing N N 194 GLU CB HB3 sing N N 195 GLU CG CD sing N N 196 GLU CG HG2 sing N N 197 GLU CG HG3 sing N N 198 GLU CD OE1 doub N N 199 GLU CD OE2 sing N N 200 GLU OE2 HE2 sing N N 201 GLU OXT HXT sing N N 202 GLY N CA sing N N 203 GLY N H sing N N 204 GLY N H2 sing N N 205 GLY CA C sing N N 206 GLY CA HA2 sing N N 207 GLY CA HA3 sing N N 208 GLY C O doub N N 209 GLY C OXT sing N N 210 GLY OXT HXT sing N N 211 HIS N CA sing N N 212 HIS N H sing N N 213 HIS N H2 sing N N 214 HIS CA C sing N N 215 HIS CA CB sing N N 216 HIS CA HA sing N N 217 HIS C O doub N N 218 HIS C OXT sing N N 219 HIS CB CG sing N N 220 HIS CB HB2 sing N N 221 HIS CB HB3 sing N N 222 HIS CG ND1 sing Y N 223 HIS CG CD2 doub Y N 224 HIS ND1 CE1 doub Y N 225 HIS ND1 HD1 sing N N 226 HIS CD2 NE2 sing Y N 227 HIS CD2 HD2 sing N N 228 HIS CE1 NE2 sing Y N 229 HIS CE1 HE1 sing N N 230 HIS NE2 HE2 sing N N 231 HIS OXT HXT sing N N 232 HOH O H1 sing N N 233 HOH O H2 sing N N 234 ILE N CA sing N N 235 ILE N H sing N N 236 ILE N H2 sing N N 237 ILE CA C sing N N 238 ILE CA CB sing N N 239 ILE CA HA sing N N 240 ILE C O doub N N 241 ILE C OXT sing N N 242 ILE CB CG1 sing N N 243 ILE CB CG2 sing N N 244 ILE CB HB sing N N 245 ILE CG1 CD1 sing N N 246 ILE CG1 HG12 sing N N 247 ILE CG1 HG13 sing N N 248 ILE CG2 HG21 sing N N 249 ILE CG2 HG22 sing N N 250 ILE CG2 HG23 sing N N 251 ILE CD1 HD11 sing N N 252 ILE CD1 HD12 sing N N 253 ILE CD1 HD13 sing N N 254 ILE OXT HXT sing N N 255 LEU N CA sing N N 256 LEU N H sing N N 257 LEU N H2 sing N N 258 LEU CA C sing N N 259 LEU CA CB sing N N 260 LEU CA HA sing N N 261 LEU C O doub N N 262 LEU C OXT sing N N 263 LEU CB CG sing N N 264 LEU CB HB2 sing N N 265 LEU CB HB3 sing N N 266 LEU CG CD1 sing N N 267 LEU CG CD2 sing N N 268 LEU CG HG sing N N 269 LEU CD1 HD11 sing N N 270 LEU CD1 HD12 sing N N 271 LEU CD1 HD13 sing N N 272 LEU CD2 HD21 sing N N 273 LEU CD2 HD22 sing N N 274 LEU CD2 HD23 sing N N 275 LEU OXT HXT sing N N 276 LYS N CA sing N N 277 LYS N H sing N N 278 LYS N H2 sing N N 279 LYS CA C sing N N 280 LYS CA CB sing N N 281 LYS CA HA sing N N 282 LYS C O doub N N 283 LYS C OXT sing N N 284 LYS CB CG sing N N 285 LYS CB HB2 sing N N 286 LYS CB HB3 sing N N 287 LYS CG CD sing N N 288 LYS CG HG2 sing N N 289 LYS CG HG3 sing N N 290 LYS CD CE sing N N 291 LYS CD HD2 sing N N 292 LYS CD HD3 sing N N 293 LYS CE NZ sing N N 294 LYS CE HE2 sing N N 295 LYS CE HE3 sing N N 296 LYS NZ HZ1 sing N N 297 LYS NZ HZ2 sing N N 298 LYS NZ HZ3 sing N N 299 LYS OXT HXT sing N N 300 MET N CA sing N N 301 MET N H sing N N 302 MET N H2 sing N N 303 MET CA C sing N N 304 MET CA CB sing N N 305 MET CA HA sing N N 306 MET C O doub N N 307 MET C OXT sing N N 308 MET CB CG sing N N 309 MET CB HB2 sing N N 310 MET CB HB3 sing N N 311 MET CG SD sing N N 312 MET CG HG2 sing N N 313 MET CG HG3 sing N N 314 MET SD CE sing N N 315 MET CE HE1 sing N N 316 MET CE HE2 sing N N 317 MET CE HE3 sing N N 318 MET OXT HXT sing N N 319 PHE N CA sing N N 320 PHE N H sing N N 321 PHE N H2 sing N N 322 PHE CA C sing N N 323 PHE CA CB sing N N 324 PHE CA HA sing N N 325 PHE C O doub N N 326 PHE C OXT sing N N 327 PHE CB CG sing N N 328 PHE CB HB2 sing N N 329 PHE CB HB3 sing N N 330 PHE CG CD1 doub Y N 331 PHE CG CD2 sing Y N 332 PHE CD1 CE1 sing Y N 333 PHE CD1 HD1 sing N N 334 PHE CD2 CE2 doub Y N 335 PHE CD2 HD2 sing N N 336 PHE CE1 CZ doub Y N 337 PHE CE1 HE1 sing N N 338 PHE CE2 CZ sing Y N 339 PHE CE2 HE2 sing N N 340 PHE CZ HZ sing N N 341 PHE OXT HXT sing N N 342 PRO N CA sing N N 343 PRO N CD sing N N 344 PRO N H sing N N 345 PRO CA C sing N N 346 PRO CA CB sing N N 347 PRO CA HA sing N N 348 PRO C O doub N N 349 PRO C OXT sing N N 350 PRO CB CG sing N N 351 PRO CB HB2 sing N N 352 PRO CB HB3 sing N N 353 PRO CG CD sing N N 354 PRO CG HG2 sing N N 355 PRO CG HG3 sing N N 356 PRO CD HD2 sing N N 357 PRO CD HD3 sing N N 358 PRO OXT HXT sing N N 359 SER N CA sing N N 360 SER N H sing N N 361 SER N H2 sing N N 362 SER CA C sing N N 363 SER CA CB sing N N 364 SER CA HA sing N N 365 SER C O doub N N 366 SER C OXT sing N N 367 SER CB OG sing N N 368 SER CB HB2 sing N N 369 SER CB HB3 sing N N 370 SER OG HG sing N N 371 SER OXT HXT sing N N 372 THR N CA sing N N 373 THR N H sing N N 374 THR N H2 sing N N 375 THR CA C sing N N 376 THR CA CB sing N N 377 THR CA HA sing N N 378 THR C O doub N N 379 THR C OXT sing N N 380 THR CB OG1 sing N N 381 THR CB CG2 sing N N 382 THR CB HB sing N N 383 THR OG1 HG1 sing N N 384 THR CG2 HG21 sing N N 385 THR CG2 HG22 sing N N 386 THR CG2 HG23 sing N N 387 THR OXT HXT sing N N 388 TRP N CA sing N N 389 TRP N H sing N N 390 TRP N H2 sing N N 391 TRP CA C sing N N 392 TRP CA CB sing N N 393 TRP CA HA sing N N 394 TRP C O doub N N 395 TRP C OXT sing N N 396 TRP CB CG sing N N 397 TRP CB HB2 sing N N 398 TRP CB HB3 sing N N 399 TRP CG CD1 doub Y N 400 TRP CG CD2 sing Y N 401 TRP CD1 NE1 sing Y N 402 TRP CD1 HD1 sing N N 403 TRP CD2 CE2 doub Y N 404 TRP CD2 CE3 sing Y N 405 TRP NE1 CE2 sing Y N 406 TRP NE1 HE1 sing N N 407 TRP CE2 CZ2 sing Y N 408 TRP CE3 CZ3 doub Y N 409 TRP CE3 HE3 sing N N 410 TRP CZ2 CH2 doub Y N 411 TRP CZ2 HZ2 sing N N 412 TRP CZ3 CH2 sing Y N 413 TRP CZ3 HZ3 sing N N 414 TRP CH2 HH2 sing N N 415 TRP OXT HXT sing N N 416 TYR N CA sing N N 417 TYR N H sing N N 418 TYR N H2 sing N N 419 TYR CA C sing N N 420 TYR CA CB sing N N 421 TYR CA HA sing N N 422 TYR C O doub N N 423 TYR C OXT sing N N 424 TYR CB CG sing N N 425 TYR CB HB2 sing N N 426 TYR CB HB3 sing N N 427 TYR CG CD1 doub Y N 428 TYR CG CD2 sing Y N 429 TYR CD1 CE1 sing Y N 430 TYR CD1 HD1 sing N N 431 TYR CD2 CE2 doub Y N 432 TYR CD2 HD2 sing N N 433 TYR CE1 CZ doub Y N 434 TYR CE1 HE1 sing N N 435 TYR CE2 CZ sing Y N 436 TYR CE2 HE2 sing N N 437 TYR CZ OH sing N N 438 TYR OH HH sing N N 439 TYR OXT HXT sing N N 440 VAL N CA sing N N 441 VAL N H sing N N 442 VAL N H2 sing N N 443 VAL CA C sing N N 444 VAL CA CB sing N N 445 VAL CA HA sing N N 446 VAL C O doub N N 447 VAL C OXT sing N N 448 VAL CB CG1 sing N N 449 VAL CB CG2 sing N N 450 VAL CB HB sing N N 451 VAL CG1 HG11 sing N N 452 VAL CG1 HG12 sing N N 453 VAL CG1 HG13 sing N N 454 VAL CG2 HG21 sing N N 455 VAL CG2 HG22 sing N N 456 VAL CG2 HG23 sing N N 457 VAL OXT HXT sing N N 458 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 90O _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 90O _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(1R,2S,3R)-5-[(E)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-1,2,3,3a,6,7-hexahydroinden-4-yl]ethenyl]-2-(3-oxidanylpropyl)cyclohex-4-ene-1,3-diol ; 90O 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DB1 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #