HEADER DNA BINDING PROTEIN/DAN 23-NOV-17 5YUW TITLE DNA POLYMERASE IV - DNA TERNARY COMPLEX 6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A, F; COMPND 4 FRAGMENT: UNP RESIDUES 2-351; COMPND 5 SYNONYM: POL IV,TRANSLESION SYNTHESIS POLYMERASE IV,TSL POLYMERASE COMPND 6 IV; COMPND 7 EC: 2.7.7.7; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DTN1; COMPND 11 CHAIN: B, G; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DTN2C; COMPND 15 CHAIN: C, H; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: PVI REPRESENTS THE PENTACOVALENT INTERMEDIATE FORMED COMPND 18 DURING DNA SYNTHESIS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 GENE: DINB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 15 ORGANISM_TAXID: 562 KEYWDS DNA POLYMERASE, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DAN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.KOTTUR,D.T.NAIR REVDAT 2 22-NOV-23 5YUW 1 LINK REVDAT 1 07-NOV-18 5YUW 0 JRNL AUTH J.KOTTUR,D.T.NAIR JRNL TITL PYROPHOSPHATE HYDROLYSIS IS AN INTRINSIC AND CRITICAL STEP JRNL TITL 2 OF THE DNA SYNTHESIS REACTION JRNL REF NUCLEIC ACIDS RES. V. 46 5875 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 29850882 JRNL DOI 10.1093/NAR/GKY402 REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 59515 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 5810 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6458 - 6.5929 0.99 3684 211 0.1465 0.1448 REMARK 3 2 6.5929 - 5.2356 1.00 3720 212 0.1699 0.1957 REMARK 3 3 5.2356 - 4.5745 1.00 3714 208 0.1494 0.1887 REMARK 3 4 4.5745 - 4.1566 1.00 3742 185 0.1449 0.2071 REMARK 3 5 4.1566 - 3.8589 1.00 3734 201 0.1520 0.2042 REMARK 3 6 3.8589 - 3.6315 1.00 3714 204 0.1668 0.2440 REMARK 3 7 3.6315 - 3.4497 1.00 3699 216 0.1748 0.1967 REMARK 3 8 3.4497 - 3.2996 1.00 3783 162 0.1667 0.1766 REMARK 3 9 3.2996 - 3.1726 1.00 3704 171 0.1757 0.2423 REMARK 3 10 3.1726 - 3.0631 1.00 3799 196 0.1885 0.2426 REMARK 3 11 3.0631 - 2.9674 1.00 3697 199 0.2020 0.2757 REMARK 3 12 2.9674 - 2.8826 1.00 3718 173 0.2054 0.2631 REMARK 3 13 2.8826 - 2.8067 1.00 3764 183 0.2130 0.2238 REMARK 3 14 2.8067 - 2.7382 1.00 3678 234 0.2105 0.2655 REMARK 3 15 2.7382 - 2.6760 0.99 3702 207 0.2310 0.2932 REMARK 3 16 2.6760 - 2.6190 0.99 3702 198 0.2347 0.2748 REMARK 3 17 2.6190 - 2.5667 0.98 3644 208 0.2381 0.3402 REMARK 3 18 2.5667 - 2.5182 0.97 3568 192 0.2356 0.2853 REMARK 3 19 2.5182 - 2.4733 0.97 3600 187 0.2342 0.2846 REMARK 3 20 2.4733 - 2.4313 0.96 3601 192 0.2359 0.2877 REMARK 3 21 2.4313 - 2.3921 0.95 3495 185 0.2446 0.2806 REMARK 3 22 2.3921 - 2.3553 0.95 3587 190 0.2455 0.2988 REMARK 3 23 2.3553 - 2.3207 0.95 3577 217 0.2464 0.2876 REMARK 3 24 2.3207 - 2.2880 0.93 3394 191 0.2467 0.2970 REMARK 3 25 2.2880 - 2.2571 0.93 3521 157 0.2693 0.2743 REMARK 3 26 2.2571 - 2.2278 0.92 3423 182 0.3176 0.3217 REMARK 3 27 2.2278 - 2.1999 0.92 3391 171 0.2818 0.3379 REMARK 3 28 2.1999 - 2.1734 0.91 3390 217 0.2702 0.2897 REMARK 3 29 2.1734 - 2.1481 0.91 3457 158 0.2709 0.3198 REMARK 3 30 2.1481 - 2.1240 0.90 3354 203 0.2725 0.3480 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7076 REMARK 3 ANGLE : 1.632 9857 REMARK 3 CHIRALITY : 0.057 1091 REMARK 3 PLANARITY : 0.006 1032 REMARK 3 DIHEDRAL : 22.976 4135 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 0 THROUGH 10 OR RESID 76 REMARK 3 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6954 -13.8079 -69.9461 REMARK 3 T TENSOR REMARK 3 T11: 0.2262 T22: 0.2363 REMARK 3 T33: 0.4747 T12: -0.0233 REMARK 3 T13: 0.0876 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 1.3302 L22: 2.3499 REMARK 3 L33: 2.4200 L12: -0.5694 REMARK 3 L13: 0.6936 L23: -0.2882 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: 0.2129 S13: -0.0734 REMARK 3 S21: -0.3920 S22: 0.0201 S23: -0.6638 REMARK 3 S31: 0.1467 S32: 0.1165 S33: 0.0475 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6310 3.4132 -69.1870 REMARK 3 T TENSOR REMARK 3 T11: 0.2616 T22: 0.2237 REMARK 3 T33: 0.4786 T12: 0.0138 REMARK 3 T13: -0.0890 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.5004 L22: 2.9559 REMARK 3 L33: 1.4525 L12: -0.2988 REMARK 3 L13: 0.5410 L23: 0.0370 REMARK 3 S TENSOR REMARK 3 S11: -0.1079 S12: 0.1933 S13: 0.5937 REMARK 3 S21: -0.3356 S22: -0.1447 S23: 0.0969 REMARK 3 S31: -0.2714 S32: -0.1844 S33: 0.1875 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 165 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3053 -14.5693 -44.3531 REMARK 3 T TENSOR REMARK 3 T11: 0.3056 T22: 0.2421 REMARK 3 T33: 0.4978 T12: 0.0364 REMARK 3 T13: -0.0930 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 2.1161 L22: 1.9929 REMARK 3 L33: 1.8341 L12: -0.7840 REMARK 3 L13: 0.2500 L23: -0.1691 REMARK 3 S TENSOR REMARK 3 S11: -0.2602 S12: -0.3374 S13: 0.0630 REMARK 3 S21: 0.5232 S22: 0.0086 S23: -0.2781 REMARK 3 S31: -0.1618 S32: -0.0678 S33: 0.1877 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 241 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.7106 -18.8424 -63.9615 REMARK 3 T TENSOR REMARK 3 T11: 0.1585 T22: 0.4670 REMARK 3 T33: 0.3222 T12: -0.0629 REMARK 3 T13: 0.0218 T23: -0.1329 REMARK 3 L TENSOR REMARK 3 L11: 3.1267 L22: 3.3232 REMARK 3 L33: 2.4576 L12: 0.2630 REMARK 3 L13: 0.5430 L23: -0.3068 REMARK 3 S TENSOR REMARK 3 S11: -0.1451 S12: -0.3480 S13: 0.4381 REMARK 3 S21: -0.2212 S22: 0.1677 S23: 0.2273 REMARK 3 S31: 0.2581 S32: -0.4733 S33: -0.0960 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 10 OR RESID 76 REMARK 3 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9141 -8.0645 3.3084 REMARK 3 T TENSOR REMARK 3 T11: 0.5552 T22: 0.3903 REMARK 3 T33: 0.2946 T12: 0.0776 REMARK 3 T13: -0.0999 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 1.8523 L22: 1.5571 REMARK 3 L33: 1.2694 L12: 0.3191 REMARK 3 L13: -0.0716 L23: 0.2032 REMARK 3 S TENSOR REMARK 3 S11: 0.0657 S12: -0.1713 S13: -0.1738 REMARK 3 S21: 0.4041 S22: -0.0217 S23: -0.3043 REMARK 3 S31: 0.2630 S32: 0.3109 S33: -0.0630 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5824 8.7919 -14.5692 REMARK 3 T TENSOR REMARK 3 T11: 0.5919 T22: 0.3941 REMARK 3 T33: 0.3205 T12: -0.0443 REMARK 3 T13: 0.0164 T23: -0.0523 REMARK 3 L TENSOR REMARK 3 L11: 1.3942 L22: 2.4421 REMARK 3 L33: 1.4448 L12: 0.0654 REMARK 3 L13: -0.4781 L23: -0.3993 REMARK 3 S TENSOR REMARK 3 S11: 0.1919 S12: 0.0075 S13: 0.2007 REMARK 3 S21: 0.0810 S22: -0.0699 S23: -0.2105 REMARK 3 S31: -0.6186 S32: 0.4803 S33: -0.0697 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.6404 -8.8571 -4.5283 REMARK 3 T TENSOR REMARK 3 T11: 0.5670 T22: 0.3842 REMARK 3 T33: 0.2603 T12: -0.0104 REMARK 3 T13: 0.0396 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 1.7200 L22: 1.9557 REMARK 3 L33: 1.0041 L12: 0.0199 REMARK 3 L13: 0.1515 L23: -0.7004 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: 0.0219 S13: 0.0713 REMARK 3 S21: -0.0669 S22: 0.0432 S23: 0.2846 REMARK 3 S31: 0.0689 S32: -0.1753 S33: -0.0882 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 241 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6851 -14.7560 -32.4493 REMARK 3 T TENSOR REMARK 3 T11: 0.4119 T22: 0.4122 REMARK 3 T33: 0.2335 T12: 0.1365 REMARK 3 T13: 0.0352 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 1.9197 L22: 2.2106 REMARK 3 L33: 3.1840 L12: 0.1122 REMARK 3 L13: -0.3270 L23: 0.5504 REMARK 3 S TENSOR REMARK 3 S11: -0.0979 S12: 0.0455 S13: -0.1895 REMARK 3 S21: 0.1480 S22: -0.0593 S23: -0.0884 REMARK 3 S31: 0.3916 S32: 0.3739 S33: 0.1388 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 860 THROUGH 873 ) OR CHAIN 'G' REMARK 3 AND (RESID 838 THROUGH 854) OR CHAIN 'F' AND (RESID REMARK 3 901 THROUGH 902) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5258 -24.0159 -52.7664 REMARK 3 T TENSOR REMARK 3 T11: 0.2272 T22: 0.3484 REMARK 3 T33: 0.3524 T12: -0.0093 REMARK 3 T13: 0.0716 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 4.0814 L22: 2.1686 REMARK 3 L33: 1.5119 L12: 0.9594 REMARK 3 L13: -0.0361 L23: -0.7481 REMARK 3 S TENSOR REMARK 3 S11: -0.0538 S12: -0.6187 S13: -0.5123 REMARK 3 S21: 0.1157 S22: -0.1434 S23: -0.1562 REMARK 3 S31: 0.1678 S32: -0.2032 S33: 0.0843 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 838 THROUGH 854 ) OR CHAIN 'C' REMARK 3 AND (RESID 857 THROUGH 873) OR CHAIN 'A' AND (RESID REMARK 3 900 THROUGH 902) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8759 -19.2852 -23.0962 REMARK 3 T TENSOR REMARK 3 T11: 0.6062 T22: 0.4299 REMARK 3 T33: 0.2929 T12: -0.0110 REMARK 3 T13: -0.0091 T23: -0.0415 REMARK 3 L TENSOR REMARK 3 L11: 0.9818 L22: 2.0714 REMARK 3 L33: 0.3915 L12: 1.3854 REMARK 3 L13: 0.6012 L23: 0.9410 REMARK 3 S TENSOR REMARK 3 S11: 0.1091 S12: -0.0438 S13: -0.0352 REMARK 3 S21: 0.1224 S22: -0.1436 S23: 0.0427 REMARK 3 S31: 0.1072 S32: -0.2395 S33: -0.0197 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YUW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300005341. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60569 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.124 REMARK 200 RESOLUTION RANGE LOW (A) : 109.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.54900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IR1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% MPD , PH 5.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.50500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 342 REMARK 465 MET A 343 REMARK 465 GLU A 344 REMARK 465 ARG A 345 REMARK 465 GLN A 346 REMARK 465 LEU A 347 REMARK 465 VAL A 348 REMARK 465 LEU A 349 REMARK 465 GLY A 350 REMARK 465 LEU A 351 REMARK 465 DT B 837 REMARK 465 DT C 856 REMARK 465 DT C 874 REMARK 465 GLN F 342 REMARK 465 MET F 343 REMARK 465 GLU F 344 REMARK 465 ARG F 345 REMARK 465 GLN F 346 REMARK 465 LEU F 347 REMARK 465 VAL F 348 REMARK 465 LEU F 349 REMARK 465 GLY F 350 REMARK 465 LEU F 351 REMARK 465 DT G 837 REMARK 465 DT H 856 REMARK 465 DC H 857 REMARK 465 DT H 858 REMARK 465 DA H 859 REMARK 465 DT H 874 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 0 N REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 LYS A 205 CG CD CE NZ REMARK 470 DC C 857 P OP1 OP2 REMARK 470 LYS F 64 CG CD CE NZ REMARK 470 LYS F 205 CG CD CE NZ REMARK 470 DG H 860 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3' DC H 873 PA TTP F 903 1.78 REMARK 500 O HOH F 1049 O HOH F 1190 1.82 REMARK 500 O HOH A 1143 O HOH A 1181 1.89 REMARK 500 O3' DC H 873 O5' TTP F 903 1.91 REMARK 500 NH1 ARG F 324 O HOH F 1001 1.93 REMARK 500 O HOH B 906 O HOH B 909 1.93 REMARK 500 O HOH A 1159 O HOH A 1168 1.95 REMARK 500 OP2 DG B 849 O HOH B 901 1.96 REMARK 500 O HOH C 1022 O HOH C 1034 1.98 REMARK 500 O HOH A 1166 O HOH B 918 1.98 REMARK 500 OD1 ASP A 233 O HOH A 1001 1.99 REMARK 500 O HOH F 1010 O HOH F 1116 2.02 REMARK 500 O4' DG H 861 O HOH H 901 2.04 REMARK 500 O HOH F 1163 O HOH F 1166 2.04 REMARK 500 O HOH A 1140 O HOH A 1157 2.04 REMARK 500 O6 DG C 862 O HOH C 1001 2.04 REMARK 500 O HOH H 912 O HOH H 923 2.05 REMARK 500 O HOH A 1168 O HOH A 1183 2.06 REMARK 500 OP1 DA C 870 O HOH C 1002 2.06 REMARK 500 O HOH A 1159 O HOH A 1183 2.09 REMARK 500 ND1 HIS F 255 O HOH F 1002 2.09 REMARK 500 O LEU A 69 O HOH A 1002 2.10 REMARK 500 OP2 DG C 861 O HOH C 1003 2.11 REMARK 500 O THR A 110 O HOH A 1003 2.13 REMARK 500 O HOH A 1044 O HOH A 1161 2.13 REMARK 500 O HOH F 1119 O HOH F 1173 2.14 REMARK 500 NH1 ARG F 38 O HOH F 1003 2.15 REMARK 500 OP2 DA G 848 O HOH G 901 2.16 REMARK 500 O HOH A 1128 O HOH A 1167 2.17 REMARK 500 OD1 ASP F 321 O HOH F 1004 2.18 REMARK 500 NE2 GLN F 227 O HOH F 1005 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC C 857 C1' DC C 857 N1 0.078 REMARK 500 DC C 872 O3' DC C 873 P 0.108 REMARK 500 DC C 873 P DC C 873 O5' 0.066 REMARK 500 DC C 873 C4' DC C 873 C3' 0.099 REMARK 500 DC C 873 C3' DC C 873 C2' -0.224 REMARK 500 DC C 873 O4' DC C 873 C1' 0.136 REMARK 500 DC C 873 O4' DC C 873 C4' -0.158 REMARK 500 DC C 873 C1' DC C 873 N1 -0.106 REMARK 500 DC C 873 C4 DC C 873 N4 0.127 REMARK 500 DC C 873 N1 DC C 873 C2 -0.063 REMARK 500 DC C 873 N1 DC C 873 C6 -0.037 REMARK 500 DC C 873 C5 DC C 873 C6 0.059 REMARK 500 DT G 839 O3' DT G 839 C3' -0.046 REMARK 500 DG H 869 O3' DG H 869 C3' -0.063 REMARK 500 DC H 873 P DC H 873 O5' 0.076 REMARK 500 DC H 873 C4' DC H 873 C3' 0.110 REMARK 500 DC H 873 C3' DC H 873 C2' -0.224 REMARK 500 DC H 873 O4' DC H 873 C1' 0.118 REMARK 500 DC H 873 O4' DC H 873 C4' -0.158 REMARK 500 DC H 873 O3' DC H 873 C3' 0.089 REMARK 500 DC H 873 C1' DC H 873 N1 -0.091 REMARK 500 DC H 873 C4 DC H 873 N4 0.103 REMARK 500 DC H 873 N1 DC H 873 C2 -0.082 REMARK 500 DC H 873 C5 DC H 873 C6 0.059 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG B 850 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC C 873 O3' - P - OP1 ANGL. DEV. = 8.0 DEGREES REMARK 500 DC C 873 OP1 - P - OP2 ANGL. DEV. = -9.2 DEGREES REMARK 500 DC C 873 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC C 873 N3 - C4 - C5 ANGL. DEV. = -3.5 DEGREES REMARK 500 PRO F 341 C - N - CA ANGL. DEV. = -10.0 DEGREES REMARK 500 DG G 842 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC G 853 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG H 869 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC H 872 C3' - O3' - P ANGL. DEV. = -12.1 DEGREES REMARK 500 DC H 873 OP1 - P - OP2 ANGL. DEV. = -10.8 DEGREES REMARK 500 DC H 873 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DC H 873 N3 - C4 - C5 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 56 -0.23 80.18 REMARK 500 GLU A 133 -56.08 68.34 REMARK 500 ASP A 230 90.62 -165.90 REMARK 500 LYS A 278 88.73 -150.68 REMARK 500 CYS F 11 53.26 38.41 REMARK 500 ALA F 56 -0.52 77.62 REMARK 500 SER F 101 -177.40 -174.44 REMARK 500 GLU F 133 -38.99 69.90 REMARK 500 LEU F 307 121.97 -27.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1185 DISTANCE = 7.52 ANGSTROMS REMARK 525 HOH A1186 DISTANCE = 7.99 ANGSTROMS REMARK 525 HOH F1206 DISTANCE = 6.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 MET A 9 O 94.8 REMARK 620 3 ASP A 103 OD2 84.1 80.7 REMARK 620 4 TTP A 900 O2A 101.5 161.8 93.0 REMARK 620 5 TTP A 900 O2B 173.8 80.8 99.4 83.4 REMARK 620 6 TTP A 900 O2G 107.4 98.0 168.4 84.7 69.1 REMARK 620 7 TTP C 901 O2A 93.8 161.1 83.5 11.6 91.6 95.3 REMARK 620 8 TTP C 901 O2B 173.4 83.4 89.3 79.5 11.0 79.2 86.1 REMARK 620 9 TTP C 901 O2G 102.0 95.8 173.3 88.6 74.3 6.2 98.8 84.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ASP A 103 OD1 92.2 REMARK 620 3 GLU A 104 OE2 116.9 115.6 REMARK 620 4 TTP A 900 O2A 79.3 95.4 142.9 REMARK 620 5 DC C 873 O3' 143.2 94.6 92.3 64.1 REMARK 620 6 DC C 873 O3' 130.6 104.4 97.2 53.4 14.5 REMARK 620 7 TTP C 901 O2A 74.3 89.1 151.0 8.1 69.7 60.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 ASP F 8 OD1 35.4 REMARK 620 3 MET F 9 O 77.9 89.1 REMARK 620 4 ASP F 103 OD2 110.5 78.4 84.9 REMARK 620 5 TTP F 903 O1A 114.8 100.7 167.2 89.1 REMARK 620 6 TTP F 903 O1B 148.4 170.6 84.8 93.8 84.4 REMARK 620 7 TTP F 903 O3G 76.8 109.7 93.3 171.8 91.1 78.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 ASP F 8 OD2 33.9 REMARK 620 3 ASP F 103 OD1 85.2 114.2 REMARK 620 4 GLU F 104 OE1 107.9 80.0 113.5 REMARK 620 5 TTP F 903 O1A 74.3 90.9 92.6 153.8 REMARK 620 6 HOH F1073 O 95.4 66.4 179.4 66.4 87.5 REMARK 620 7 DC H 873 O3' 144.6 152.3 88.3 106.5 71.3 91.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TTP A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TTP C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TTP F 903 DBREF 5YUW A 2 351 UNP Q47155 DPO4_ECOLI 2 351 DBREF 5YUW B 837 854 PDB 5YUW 5YUW 837 854 DBREF 5YUW C 856 874 PDB 5YUW 5YUW 856 874 DBREF 5YUW F 2 351 UNP Q47155 DPO4_ECOLI 2 351 DBREF 5YUW G 837 854 PDB 5YUW 5YUW 837 854 DBREF 5YUW H 856 874 PDB 5YUW 5YUW 856 874 SEQADV 5YUW GLY A 0 UNP Q47155 EXPRESSION TAG SEQADV 5YUW SER A 1 UNP Q47155 EXPRESSION TAG SEQADV 5YUW GLY F 0 UNP Q47155 EXPRESSION TAG SEQADV 5YUW SER F 1 UNP Q47155 EXPRESSION TAG SEQRES 1 A 352 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 A 352 PHE ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 A 352 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 A 352 GLY VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 A 352 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 A 352 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 A 352 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 A 352 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 A 352 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 A 352 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 A 352 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 A 352 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 A 352 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 A 352 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 A 352 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 A 352 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 A 352 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 A 352 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 A 352 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 A 352 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 A 352 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 A 352 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 A 352 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 A 352 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 A 352 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 A 352 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 A 352 LEU LEU ASP PRO GLN MET GLU ARG GLN LEU VAL LEU GLY SEQRES 28 A 352 LEU SEQRES 1 B 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 B 18 DG DA DC DC DC SEQRES 1 C 19 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 C 19 DG DA DC DC DC DT SEQRES 1 F 352 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 F 352 PHE ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 F 352 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 F 352 GLY VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 F 352 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 F 352 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 F 352 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 F 352 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 F 352 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 F 352 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 F 352 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 F 352 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 F 352 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 F 352 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 F 352 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 F 352 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 F 352 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 F 352 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 F 352 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 F 352 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 F 352 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 F 352 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 F 352 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 F 352 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 F 352 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 F 352 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 F 352 LEU LEU ASP PRO GLN MET GLU ARG GLN LEU VAL LEU GLY SEQRES 28 F 352 LEU SEQRES 1 G 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 G 18 DG DA DC DC DC SEQRES 1 H 19 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 H 19 DG DA DC DC DC DT HET TTP A 900 29 HET MG A 901 1 HET MG A 902 1 HET TTP C 901 29 HET MG F 901 1 HET MG F 902 1 HET TTP F 903 29 HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 7 TTP 3(C10 H17 N2 O14 P3) FORMUL 8 MG 4(MG 2+) FORMUL 14 HOH *522(H2 O) HELIX 1 AA1 CYS A 11 ASN A 21 1 11 HELIX 2 AA2 PRO A 22 ARG A 25 5 4 HELIX 3 AA3 ASN A 45 LYS A 50 1 6 HELIX 4 AA4 PRO A 58 CYS A 66 1 9 HELIX 5 AA5 ARG A 75 THR A 94 1 20 HELIX 6 AA6 HIS A 114 GLY A 117 5 4 HELIX 7 AA7 SER A 118 GLN A 135 1 18 HELIX 8 AA8 VAL A 145 SER A 153 1 9 HELIX 9 AA9 THR A 165 ALA A 167 5 3 HELIX 10 AB1 GLU A 168 THR A 175 1 8 HELIX 11 AB2 PRO A 177 ILE A 181 5 5 HELIX 12 AB3 GLY A 185 MET A 195 1 11 HELIX 13 AB4 THR A 199 LYS A 205 1 7 HELIX 14 AB5 ASP A 207 GLY A 216 1 10 HELIX 15 AB6 GLY A 216 SER A 226 1 11 HELIX 16 AB7 HIS A 255 LYS A 278 1 24 HELIX 17 AB8 ASN A 308 ARG A 324 1 17 HELIX 18 AB9 CYS F 11 ASN F 21 1 11 HELIX 19 AC1 PRO F 22 ARG F 25 5 4 HELIX 20 AC2 ASN F 45 LYS F 50 1 6 HELIX 21 AC3 PRO F 58 CYS F 66 1 9 HELIX 22 AC4 ARG F 75 ARG F 92 1 18 HELIX 23 AC5 VAL F 113 GLY F 117 5 5 HELIX 24 AC6 SER F 118 GLN F 135 1 18 HELIX 25 AC7 VAL F 145 ASP F 154 1 10 HELIX 26 AC8 GLU F 168 THR F 175 1 8 HELIX 27 AC9 PRO F 177 ILE F 181 5 5 HELIX 28 AD1 GLY F 185 MET F 195 1 11 HELIX 29 AD2 THR F 199 LYS F 205 1 7 HELIX 30 AD3 ASP F 207 GLY F 216 1 10 HELIX 31 AD4 GLY F 216 SER F 226 1 11 HELIX 32 AD5 HIS F 255 LYS F 278 1 24 HELIX 33 AD6 ASN F 308 ARG F 324 1 17 SHEET 1 AA1 5 ILE A 97 SER A 101 0 SHEET 2 AA1 5 GLU A 104 ASP A 108 -1 O TYR A 106 N GLU A 98 SHEET 3 AA1 5 ILE A 4 MET A 9 -1 N ILE A 5 O LEU A 107 SHEET 4 AA1 5 ALA A 138 ALA A 143 -1 O SER A 139 N ASP A 8 SHEET 5 AA1 5 GLN A 161 VAL A 163 1 O PHE A 162 N VAL A 142 SHEET 1 AA2 3 ILE A 41 ALA A 44 0 SHEET 2 AA2 3 ILE A 29 GLY A 32 -1 N ILE A 31 O SER A 42 SHEET 3 AA2 3 THR A 70 LEU A 72 1 O LEU A 72 N ALA A 30 SHEET 1 AA3 4 SER A 242 ILE A 253 0 SHEET 2 AA3 4 VAL A 329 THR A 337 -1 O LEU A 334 N VAL A 245 SHEET 3 AA3 4 ARG A 285 PHE A 292 -1 N GLY A 287 O HIS A 335 SHEET 4 AA3 4 GLN A 297 VAL A 303 -1 O THR A 298 N LEU A 290 SHEET 1 AA4 5 ILE F 97 SER F 101 0 SHEET 2 AA4 5 GLU F 104 ASP F 108 -1 O TYR F 106 N GLU F 98 SHEET 3 AA4 5 ILE F 4 MET F 9 -1 N ILE F 5 O LEU F 107 SHEET 4 AA4 5 ALA F 138 ALA F 143 -1 O GLY F 141 N HIS F 6 SHEET 5 AA4 5 GLN F 161 VAL F 163 1 O PHE F 162 N VAL F 142 SHEET 1 AA5 3 ILE F 41 ALA F 44 0 SHEET 2 AA5 3 ILE F 29 GLY F 32 -1 N ILE F 31 O SER F 42 SHEET 3 AA5 3 THR F 70 LEU F 72 1 O LEU F 72 N ALA F 30 SHEET 1 AA6 4 SER F 242 ILE F 253 0 SHEET 2 AA6 4 VAL F 329 THR F 337 -1 O LEU F 334 N VAL F 245 SHEET 3 AA6 4 ARG F 285 PHE F 292 -1 N GLY F 287 O HIS F 335 SHEET 4 AA6 4 GLN F 297 VAL F 303 -1 O GLN F 300 N VAL F 288 LINK O3'B DC C 873 PA BTTP C 901 1555 1555 1.72 LINK OD1 ASP A 8 MG MG A 901 1555 1555 2.20 LINK OD1 ASP A 8 MG MG A 902 1555 1555 2.81 LINK O MET A 9 MG MG A 901 1555 1555 2.33 LINK OD2 ASP A 103 MG MG A 901 1555 1555 2.43 LINK OD1 ASP A 103 MG MG A 902 1555 1555 2.26 LINK OE2 GLU A 104 MG MG A 902 1555 1555 1.81 LINK O2AATTP A 900 MG MG A 901 1555 1555 2.23 LINK O2BATTP A 900 MG MG A 901 1555 1555 2.18 LINK O2GATTP A 900 MG MG A 901 1555 1555 2.58 LINK O2AATTP A 900 MG MG A 902 1555 1555 2.56 LINK MG MG A 901 O2ABTTP C 901 1555 1555 1.99 LINK MG MG A 901 O2BBTTP C 901 1555 1555 2.22 LINK MG MG A 901 O2GBTTP C 901 1555 1555 2.35 LINK MG MG A 902 O3'A DC C 873 1555 1555 2.29 LINK MG MG A 902 O3'B DC C 873 1555 1555 2.42 LINK MG MG A 902 O2ABTTP C 901 1555 1555 2.21 LINK OD1AASP F 8 MG MG F 901 1555 1555 2.22 LINK OD1BASP F 8 MG MG F 901 1555 1555 2.34 LINK OD1BASP F 8 MG MG F 902 1555 1555 2.84 LINK OD2AASP F 8 MG MG F 902 1555 1555 2.42 LINK O MET F 9 MG MG F 901 1555 1555 2.26 LINK OD2 ASP F 103 MG MG F 901 1555 1555 2.32 LINK OD1 ASP F 103 MG MG F 902 1555 1555 2.35 LINK OE1 GLU F 104 MG MG F 902 1555 1555 2.01 LINK MG MG F 901 O1A TTP F 903 1555 1555 1.80 LINK MG MG F 901 O1B TTP F 903 1555 1555 2.01 LINK MG MG F 901 O3G TTP F 903 1555 1555 2.36 LINK MG MG F 902 O1A TTP F 903 1555 1555 2.44 LINK MG MG F 902 O HOH F1073 1555 1555 2.90 LINK MG MG F 902 O3' DC H 873 1555 1555 2.46 CISPEP 1 LYS A 157 PRO A 158 0 -0.29 CISPEP 2 LYS F 157 PRO F 158 0 -3.89 SITE 1 AC1 20 ASP A 8 MET A 9 ASP A 10 CYS A 11 SITE 2 AC1 20 PHE A 12 PHE A 13 SER A 42 THR A 43 SITE 3 AC1 20 ARG A 49 SER A 55 ASP A 103 LYS A 157 SITE 4 AC1 20 MG A 901 MG A 902 HOH A1026 DA B 840 SITE 5 AC1 20 DC C 873 TTP C 901 HOH C1009 HOH C1011 SITE 1 AC2 6 ASP A 8 MET A 9 ASP A 103 TTP A 900 SITE 2 AC2 6 MG A 902 TTP C 901 SITE 1 AC3 7 ASP A 8 ASP A 103 GLU A 104 TTP A 900 SITE 2 AC3 7 MG A 901 DC C 873 TTP C 901 SITE 1 AC4 20 ASP A 8 MET A 9 ASP A 10 CYS A 11 SITE 2 AC4 20 PHE A 12 PHE A 13 SER A 42 THR A 43 SITE 3 AC4 20 ARG A 49 SER A 55 ASP A 103 LYS A 157 SITE 4 AC4 20 TTP A 900 MG A 901 MG A 902 HOH A1026 SITE 5 AC4 20 DA B 840 DC C 873 HOH C1009 HOH C1011 SITE 1 AC5 5 ASP F 8 MET F 9 ASP F 103 MG F 902 SITE 2 AC5 5 TTP F 903 SITE 1 AC6 7 ASP F 8 ASP F 103 GLU F 104 MG F 901 SITE 2 AC6 7 TTP F 903 HOH F1073 DC H 873 SITE 1 AC7 20 ASP F 8 MET F 9 ASP F 10 CYS F 11 SITE 2 AC7 20 PHE F 12 PHE F 13 SER F 42 THR F 43 SITE 3 AC7 20 ARG F 49 ASP F 103 LYS F 157 MG F 901 SITE 4 AC7 20 MG F 902 HOH F1012 HOH F1021 HOH F1074 SITE 5 AC7 20 DA G 840 DG G 841 DC H 873 HOH H 916 CRYST1 86.190 57.010 110.040 90.00 94.59 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011602 0.000000 0.000931 0.00000 SCALE2 0.000000 0.017541 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009117 0.00000