HEADER DNA BINDING PROTEIN/DNA 23-NOV-17 5YUZ TITLE DNA POLYMERASE IV - DNA TERNARY COMPLEX 11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: F, A; COMPND 4 SYNONYM: POL IV,TRANSLESION SYNTHESIS POLYMERASE IV,TSL POLYMERASE COMPND 5 IV; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DTN1; COMPND 10 CHAIN: G, B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DTN2; COMPND 14 CHAIN: H, C; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 GENE: DINB, DINP, B0231, JW0221; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 11 ORGANISM_TAXID: 83333; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 15 ORGANISM_TAXID: 83333 KEYWDS DNA POLYMERASE, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.KOTTUR,D.T.NAIR REVDAT 2 22-NOV-23 5YUZ 1 LINK REVDAT 1 14-NOV-18 5YUZ 0 JRNL AUTH J.KOTTUR,D.T.NAIR JRNL TITL PYROPHOSPHATE HYDROLYSIS IS AN INTRINSIC AND CRITICAL STEP JRNL TITL 2 OF THE DNA SYNTHESIS REACTION. JRNL REF NUCLEIC ACIDS RES. V. 46 5875 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 29850882 JRNL DOI 10.1093/NAR/GKY402 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 94254 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 9124 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8086 - 5.6825 0.89 5189 297 0.1791 0.1893 REMARK 3 2 5.6825 - 4.5118 1.00 5836 332 0.1651 0.2085 REMARK 3 3 4.5118 - 3.9418 1.00 5900 260 0.1497 0.1902 REMARK 3 4 3.9418 - 3.5816 1.00 5762 357 0.1632 0.2157 REMARK 3 5 3.5816 - 3.3250 1.00 5883 284 0.1680 0.1925 REMARK 3 6 3.3250 - 3.1290 1.00 5904 270 0.1749 0.2186 REMARK 3 7 3.1290 - 2.9723 1.00 5853 316 0.2043 0.2351 REMARK 3 8 2.9723 - 2.8430 1.00 5885 269 0.2059 0.2188 REMARK 3 9 2.8430 - 2.7335 1.00 5799 346 0.2091 0.2369 REMARK 3 10 2.7335 - 2.6392 1.00 5803 331 0.2138 0.2630 REMARK 3 11 2.6392 - 2.5567 1.00 5882 326 0.2250 0.2418 REMARK 3 12 2.5567 - 2.4836 1.00 5798 333 0.2174 0.2560 REMARK 3 13 2.4836 - 2.4182 1.00 5903 303 0.2240 0.2662 REMARK 3 14 2.4182 - 2.3592 1.00 5853 285 0.2302 0.2660 REMARK 3 15 2.3592 - 2.3056 1.00 5822 317 0.2263 0.2781 REMARK 3 16 2.3056 - 2.2566 1.00 5808 336 0.2175 0.2783 REMARK 3 17 2.2566 - 2.2114 1.00 5850 319 0.2222 0.2920 REMARK 3 18 2.2114 - 2.1697 1.00 5880 302 0.2246 0.2762 REMARK 3 19 2.1697 - 2.1309 1.00 5876 293 0.2254 0.2578 REMARK 3 20 2.1309 - 2.0948 1.00 5852 285 0.2462 0.2934 REMARK 3 21 2.0948 - 2.0610 1.00 5876 272 0.2550 0.2625 REMARK 3 22 2.0610 - 2.0293 1.00 5890 288 0.2664 0.2767 REMARK 3 23 2.0293 - 1.9995 1.00 5876 293 0.2715 0.3026 REMARK 3 24 1.9995 - 1.9713 1.00 5811 324 0.2814 0.3201 REMARK 3 25 1.9713 - 1.9447 1.00 5935 281 0.2865 0.3180 REMARK 3 26 1.9447 - 1.9194 1.00 5802 301 0.2910 0.2973 REMARK 3 27 1.9194 - 1.8954 1.00 5832 321 0.3024 0.3356 REMARK 3 28 1.8954 - 1.8726 1.00 5909 268 0.3114 0.3280 REMARK 3 29 1.8726 - 1.8508 1.00 5806 300 0.3218 0.3399 REMARK 3 30 1.8508 - 1.8300 0.99 5808 315 0.3323 0.3343 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7087 REMARK 3 ANGLE : 1.248 9867 REMARK 3 CHIRALITY : 0.060 1099 REMARK 3 PLANARITY : 0.007 1033 REMARK 3 DIHEDRAL : 18.839 4087 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 0 THROUGH 10 OR RESID 76 REMARK 3 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5003 -14.0872 -70.1227 REMARK 3 T TENSOR REMARK 3 T11: 0.2277 T22: 0.2039 REMARK 3 T33: 0.5219 T12: -0.0229 REMARK 3 T13: 0.0864 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 2.0556 L22: 1.8256 REMARK 3 L33: 2.2228 L12: -0.1411 REMARK 3 L13: 1.1950 L23: -0.3106 REMARK 3 S TENSOR REMARK 3 S11: -0.0639 S12: 0.2389 S13: 0.0918 REMARK 3 S21: -0.2943 S22: -0.0293 S23: -0.7749 REMARK 3 S31: 0.0517 S32: 0.1798 S33: 0.0839 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9141 3.3093 -69.2864 REMARK 3 T TENSOR REMARK 3 T11: 0.2901 T22: 0.2385 REMARK 3 T33: 0.6297 T12: 0.0118 REMARK 3 T13: -0.1059 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 1.0304 L22: 2.9161 REMARK 3 L33: 1.4413 L12: -0.1285 REMARK 3 L13: 0.8289 L23: 0.2765 REMARK 3 S TENSOR REMARK 3 S11: -0.0980 S12: 0.1386 S13: 0.7943 REMARK 3 S21: -0.3162 S22: -0.2108 S23: 0.1832 REMARK 3 S31: -0.3453 S32: -0.1655 S33: 0.2380 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 165 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1287 -14.7158 -44.4372 REMARK 3 T TENSOR REMARK 3 T11: 0.3202 T22: 0.2152 REMARK 3 T33: 0.5692 T12: 0.0452 REMARK 3 T13: -0.1379 T23: -0.0849 REMARK 3 L TENSOR REMARK 3 L11: 2.2622 L22: 1.9138 REMARK 3 L33: 1.6378 L12: -0.4552 REMARK 3 L13: 0.2380 L23: -0.0888 REMARK 3 S TENSOR REMARK 3 S11: -0.3072 S12: -0.2653 S13: 0.1910 REMARK 3 S21: 0.5192 S22: 0.0162 S23: -0.3204 REMARK 3 S31: -0.1044 S32: -0.0081 S33: 0.2206 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 241 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9252 -19.0441 -64.1834 REMARK 3 T TENSOR REMARK 3 T11: 0.1622 T22: 0.4303 REMARK 3 T33: 0.2883 T12: -0.0656 REMARK 3 T13: 0.0171 T23: -0.1541 REMARK 3 L TENSOR REMARK 3 L11: 2.9422 L22: 2.6272 REMARK 3 L33: 2.4447 L12: 0.2582 REMARK 3 L13: 0.5231 L23: -0.4397 REMARK 3 S TENSOR REMARK 3 S11: -0.1570 S12: -0.3360 S13: 0.5360 REMARK 3 S21: -0.1679 S22: 0.1256 S23: 0.1369 REMARK 3 S31: 0.2318 S32: -0.5347 S33: 0.0037 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 10 OR RESID 76 REMARK 3 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9176 -8.2334 3.2594 REMARK 3 T TENSOR REMARK 3 T11: 0.6811 T22: 0.4711 REMARK 3 T33: 0.3467 T12: 0.0912 REMARK 3 T13: -0.0976 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 2.2656 L22: 1.5646 REMARK 3 L33: 1.9471 L12: 0.0242 REMARK 3 L13: -0.0695 L23: 0.0680 REMARK 3 S TENSOR REMARK 3 S11: 0.0638 S12: -0.2607 S13: -0.1859 REMARK 3 S21: 0.3883 S22: -0.0160 S23: -0.2594 REMARK 3 S31: 0.3430 S32: 0.4642 S33: -0.0163 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7254 8.7201 -14.7115 REMARK 3 T TENSOR REMARK 3 T11: 0.7003 T22: 0.4008 REMARK 3 T33: 0.3150 T12: -0.0808 REMARK 3 T13: 0.0058 T23: -0.0486 REMARK 3 L TENSOR REMARK 3 L11: 2.2099 L22: 2.9024 REMARK 3 L33: 2.4595 L12: 0.1258 REMARK 3 L13: -0.8164 L23: 0.2517 REMARK 3 S TENSOR REMARK 3 S11: 0.2625 S12: -0.1193 S13: 0.2909 REMARK 3 S21: 0.0895 S22: -0.0132 S23: -0.2479 REMARK 3 S31: -0.7636 S32: 0.5380 S33: -0.2255 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.7285 -8.9043 -4.4320 REMARK 3 T TENSOR REMARK 3 T11: 0.6580 T22: 0.4167 REMARK 3 T33: 0.2821 T12: -0.0155 REMARK 3 T13: 0.0438 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.7740 L22: 2.1654 REMARK 3 L33: 1.7121 L12: 0.2555 REMARK 3 L13: 0.4901 L23: -0.4787 REMARK 3 S TENSOR REMARK 3 S11: 0.0893 S12: -0.1055 S13: 0.0712 REMARK 3 S21: 0.0576 S22: -0.0882 S23: 0.3560 REMARK 3 S31: 0.2327 S32: -0.3355 S33: -0.0317 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 241 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.8385 -14.9522 -32.5355 REMARK 3 T TENSOR REMARK 3 T11: 0.4596 T22: 0.4150 REMARK 3 T33: 0.2395 T12: 0.1419 REMARK 3 T13: -0.0056 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 2.7013 L22: 3.0102 REMARK 3 L33: 3.6863 L12: -0.3737 REMARK 3 L13: -0.6355 L23: 0.4832 REMARK 3 S TENSOR REMARK 3 S11: -0.1842 S12: -0.0078 S13: -0.3090 REMARK 3 S21: 0.2641 S22: -0.0198 S23: -0.1656 REMARK 3 S31: 0.4532 S32: 0.3759 S33: 0.1730 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 860 THROUGH 874 ) OR CHAIN 'G' REMARK 3 AND (RESID 838 THROUGH 854) OR CHAIN 'F' AND (RESID REMARK 3 901 THROUGH 903) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7547 -24.2713 -52.9436 REMARK 3 T TENSOR REMARK 3 T11: 0.1823 T22: 0.3146 REMARK 3 T33: 0.3365 T12: -0.0180 REMARK 3 T13: 0.0689 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 3.6367 L22: 2.2889 REMARK 3 L33: 1.9025 L12: 0.9868 REMARK 3 L13: 0.0354 L23: -1.1729 REMARK 3 S TENSOR REMARK 3 S11: -0.0749 S12: -0.5374 S13: -0.4109 REMARK 3 S21: 0.0702 S22: -0.1378 S23: -0.1571 REMARK 3 S31: 0.1381 S32: -0.2505 S33: 0.1645 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 838 THROUGH 854 ) OR CHAIN 'C' REMARK 3 AND (RESID 857 THROUGH 874) OR CHAIN 'A' AND (RESID REMARK 3 901 THROUGH 903) REMARK 3 ORIGIN FOR THE GROUP (A): -41.9589 -19.4652 -23.1370 REMARK 3 T TENSOR REMARK 3 T11: 0.5913 T22: 0.4336 REMARK 3 T33: 0.2506 T12: -0.0065 REMARK 3 T13: -0.0271 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.4835 L22: 2.9858 REMARK 3 L33: 0.5171 L12: 1.6499 REMARK 3 L13: 0.5551 L23: 1.2259 REMARK 3 S TENSOR REMARK 3 S11: 0.1325 S12: -0.0477 S13: -0.0383 REMARK 3 S21: 0.1413 S22: -0.1693 S23: 0.0844 REMARK 3 S31: 0.0758 S32: -0.2430 S33: 0.0240 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YUZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1300005351. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94643 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 57.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.59600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IR1 REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% MPD , PH 5.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.56500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN F 342 REMARK 465 MET F 343 REMARK 465 GLU F 344 REMARK 465 ARG F 345 REMARK 465 GLN F 346 REMARK 465 LEU F 347 REMARK 465 VAL F 348 REMARK 465 LEU F 349 REMARK 465 GLY F 350 REMARK 465 LEU F 351 REMARK 465 GLN A 342 REMARK 465 MET A 343 REMARK 465 GLU A 344 REMARK 465 ARG A 345 REMARK 465 GLN A 346 REMARK 465 LEU A 347 REMARK 465 VAL A 348 REMARK 465 LEU A 349 REMARK 465 GLY A 350 REMARK 465 LEU A 351 REMARK 465 DT G 837 REMARK 465 DT H 856 REMARK 465 DC H 857 REMARK 465 DT H 858 REMARK 465 DA H 859 REMARK 465 DT B 837 REMARK 465 DT C 856 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG H 860 P OP1 OP2 REMARK 470 DC C 857 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG F 317 O HOH F 1001 1.82 REMARK 500 N ALA F 119 O HOH F 1002 1.84 REMARK 500 O HOH F 1113 O HOH F 1170 1.85 REMARK 500 O HOH F 1237 O HOH G 949 1.86 REMARK 500 O HOH A 1111 O HOH A 1177 1.86 REMARK 500 O HOH F 1018 O HOH F 1183 1.96 REMARK 500 O HOH A 1181 O HOH A 1189 1.99 REMARK 500 O HOH F 1010 O HOH F 1178 2.00 REMARK 500 O HOH F 1127 O HOH F 1191 2.05 REMARK 500 OE2 GLU F 224 O HOH F 1003 2.06 REMARK 500 OP1 DT H 863 O HOH H 901 2.07 REMARK 500 O HOH C 1015 O HOH C 1036 2.08 REMARK 500 O HOH F 1018 O HOH F 1120 2.09 REMARK 500 O HOH B 940 O HOH C 1034 2.09 REMARK 500 O HOH G 940 O HOH H 929 2.09 REMARK 500 O HOH F 1198 O HOH F 1212 2.10 REMARK 500 O HOH A 1116 O HOH A 1154 2.11 REMARK 500 OP2 DA G 848 O HOH G 901 2.12 REMARK 500 OD2 ASP F 321 O HOH F 1004 2.12 REMARK 500 O ARG F 35 O HOH F 1005 2.13 REMARK 500 ND1 HIS F 255 O HOH F 1006 2.14 REMARK 500 O HOH C 1015 O HOH C 1038 2.15 REMARK 500 OD2 ASP A 321 O HOH A 1001 2.15 REMARK 500 OP1 DT C 863 O HOH C 1001 2.15 REMARK 500 O HOH F 1259 O HOH F 1260 2.16 REMARK 500 OE2 GLU A 193 O HOH A 1002 2.17 REMARK 500 NH2 ARG F 198 O HOH F 1007 2.17 REMARK 500 NH1 ARG F 38 O HOH F 1008 2.17 REMARK 500 OE2 GLU F 271 O HOH F 1009 2.18 REMARK 500 O HOH A 1111 O HOH A 1113 2.18 REMARK 500 OE1 GLN F 124 NH2 ARG F 127 2.19 REMARK 500 OP2 DA G 840 O HOH G 902 2.19 REMARK 500 OD2 ASP F 8 O HOH F 1010 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH F 1184 O HOH F 1238 2554 2.01 REMARK 500 O HOH A 1195 O HOH H 939 1565 2.12 REMARK 500 O HOH F 1197 O HOH A 1206 2444 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG H 869 O3' DG H 869 C3' -0.040 REMARK 500 DT B 839 O3' DT B 839 C3' -0.037 REMARK 500 DT B 847 O3' DT B 847 C3' -0.037 REMARK 500 DC C 873 P DC C 873 O5' 0.069 REMARK 500 DC C 873 C4' DC C 873 C3' 0.108 REMARK 500 DC C 873 C3' DC C 873 C2' -0.220 REMARK 500 DC C 873 O4' DC C 873 C1' 0.136 REMARK 500 DC C 873 O4' DC C 873 C4' -0.150 REMARK 500 DC C 873 O3' DC C 873 C3' 0.101 REMARK 500 DC C 873 C1' DC C 873 N1 -0.089 REMARK 500 DC C 873 C4 DC C 873 N4 0.120 REMARK 500 DC C 873 N1 DC C 873 C2 -0.064 REMARK 500 DC C 873 N1 DC C 873 C6 -0.036 REMARK 500 DC C 873 C5 DC C 873 C6 0.056 REMARK 500 DC C 873 O3' DT C 874 P 0.090 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC G 853 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG H 869 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC H 872 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC B 838 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG B 850 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC C 873 OP1 - P - OP2 ANGL. DEV. = -9.3 DEGREES REMARK 500 DC C 873 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC C 873 N3 - C4 - C5 ANGL. DEV. = -3.2 DEGREES REMARK 500 DT C 874 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS F 11 49.92 38.80 REMARK 500 SER F 101 -178.66 -174.09 REMARK 500 PHE F 215 -0.62 -143.09 REMARK 500 ASP F 230 90.29 -163.55 REMARK 500 ALA A 56 -1.60 76.51 REMARK 500 SER A 101 -176.40 -170.34 REMARK 500 GLU A 133 -51.00 69.09 REMARK 500 ASP A 230 88.03 -166.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH F1257 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH F1258 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH F1259 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH F1260 DISTANCE = 6.51 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 ASP F 8 OD1 34.2 REMARK 620 3 MET F 9 O 74.1 89.4 REMARK 620 4 ASP F 103 OD2 108.5 78.4 89.6 REMARK 620 5 DPO F 903 O1 153.9 169.7 89.7 91.4 REMARK 620 6 DPO F 903 O7 78.9 109.0 91.4 172.6 81.3 REMARK 620 7 DT H 874 OP1 105.7 88.2 175.6 86.3 92.0 92.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 ASP F 8 OD2 36.3 REMARK 620 3 ASP F 103 OD1 86.4 118.6 REMARK 620 4 GLU F 104 OE2 115.3 86.2 113.1 REMARK 620 5 HOH F1015 O 91.0 58.0 175.7 64.9 REMARK 620 6 DC H 873 O3' 147.0 142.0 96.3 93.9 87.7 REMARK 620 7 DT H 874 OP1 83.7 95.6 97.5 144.0 85.6 63.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ASP A 8 OD2 47.1 REMARK 620 3 MET A 9 O 103.2 77.7 REMARK 620 4 ASP A 103 OD2 83.6 119.6 84.4 REMARK 620 5 DPO A 903 O2 166.9 142.6 89.1 93.2 REMARK 620 6 DPO A 903 O6 109.5 73.9 96.6 166.2 73.1 REMARK 620 7 DT C 874 OP1 74.7 104.4 173.6 89.4 92.6 89.8 REMARK 620 8 TTP C 901 O2A 72.2 105.5 167.8 83.8 94.8 95.7 5.9 REMARK 620 9 TTP C 901 O2B 169.3 141.7 86.3 92.7 2.8 73.7 95.3 97.5 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ASP A 103 OD1 105.8 REMARK 620 3 GLU A 104 OE1 104.6 120.3 REMARK 620 4 DC C 873 O3' 135.0 103.6 88.6 REMARK 620 5 DC C 873 O3' 146.8 94.0 87.1 12.1 REMARK 620 6 DT C 874 OP1 88.8 96.5 134.1 54.5 62.2 REMARK 620 7 TTP C 901 O2A 87.7 91.9 139.3 58.0 64.9 5.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DPO F 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DPO A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide TTP C 901 and DC REMARK 800 C 873 DBREF 5YUZ F 2 351 UNP Q47155 DPO4_ECOLI 2 351 DBREF 5YUZ A 2 351 UNP Q47155 DPO4_ECOLI 2 351 DBREF 5YUZ G 837 854 PDB 5YUZ 5YUZ 837 854 DBREF 5YUZ H 856 874 PDB 5YUZ 5YUZ 856 874 DBREF 5YUZ B 837 854 PDB 5YUZ 5YUZ 837 854 DBREF 5YUZ C 856 874 PDB 5YUZ 5YUZ 856 874 SEQADV 5YUZ GLY F 0 UNP Q47155 EXPRESSION TAG SEQADV 5YUZ SER F 1 UNP Q47155 EXPRESSION TAG SEQADV 5YUZ GLY A 0 UNP Q47155 EXPRESSION TAG SEQADV 5YUZ SER A 1 UNP Q47155 EXPRESSION TAG SEQRES 1 F 352 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 F 352 PHE ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 F 352 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 F 352 GLY VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 F 352 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 F 352 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 F 352 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 F 352 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 F 352 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 F 352 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 F 352 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 F 352 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 F 352 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 F 352 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 F 352 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 F 352 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 F 352 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 F 352 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 F 352 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 F 352 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 F 352 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 F 352 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 F 352 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 F 352 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 F 352 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 F 352 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 F 352 LEU LEU ASP PRO GLN MET GLU ARG GLN LEU VAL LEU GLY SEQRES 28 F 352 LEU SEQRES 1 A 352 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 A 352 PHE ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 A 352 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 A 352 GLY VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 A 352 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 A 352 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 A 352 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 A 352 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 A 352 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 A 352 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 A 352 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 A 352 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 A 352 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 A 352 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 A 352 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 A 352 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 A 352 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 A 352 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 A 352 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 A 352 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 A 352 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 A 352 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 A 352 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 A 352 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 A 352 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 A 352 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 A 352 LEU LEU ASP PRO GLN MET GLU ARG GLN LEU VAL LEU GLY SEQRES 28 A 352 LEU SEQRES 1 G 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 G 18 DG DA DC DC DC SEQRES 1 H 19 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 H 19 DG DA DC DC DC DT SEQRES 1 B 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 B 18 DG DA DC DC DC SEQRES 1 C 19 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 C 19 DG DA DC DC DC DT HET MG F 901 1 HET MG F 902 1 HET DPO F 903 9 HET MG A 901 1 HET MG A 902 1 HET DPO A 903 9 HET TTP C 901 29 HETNAM MG MAGNESIUM ION HETNAM DPO DIPHOSPHATE HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE FORMUL 7 MG 4(MG 2+) FORMUL 9 DPO 2(O7 P2 4-) FORMUL 13 TTP C10 H17 N2 O14 P3 FORMUL 14 HOH *643(H2 O) HELIX 1 AA1 CYS F 11 ASN F 21 1 11 HELIX 2 AA2 PRO F 22 ARG F 25 5 4 HELIX 3 AA3 ASN F 45 LYS F 50 1 6 HELIX 4 AA4 PRO F 58 CYS F 66 1 9 HELIX 5 AA5 ARG F 75 ARG F 92 1 18 HELIX 6 AA6 VAL F 113 GLY F 117 5 5 HELIX 7 AA7 SER F 118 GLN F 135 1 18 HELIX 8 AA8 VAL F 145 ASN F 156 1 12 HELIX 9 AA9 THR F 165 ALA F 167 5 3 HELIX 10 AB1 GLU F 168 THR F 175 1 8 HELIX 11 AB2 PRO F 177 ILE F 181 5 5 HELIX 12 AB3 GLY F 185 MET F 195 1 11 HELIX 13 AB4 THR F 199 LYS F 205 1 7 HELIX 14 AB5 ASP F 207 GLY F 216 1 10 HELIX 15 AB6 GLY F 216 SER F 226 1 11 HELIX 16 AB7 HIS F 255 LYS F 278 1 24 HELIX 17 AB8 ASN F 308 ARG F 324 1 17 HELIX 18 AB9 CYS A 11 ASN A 21 1 11 HELIX 19 AC1 PRO A 22 ARG A 25 5 4 HELIX 20 AC2 ASN A 45 LYS A 50 1 6 HELIX 21 AC3 PRO A 58 CYS A 66 1 9 HELIX 22 AC4 ARG A 75 THR A 94 1 20 HELIX 23 AC5 HIS A 114 GLY A 117 5 4 HELIX 24 AC6 SER A 118 GLN A 135 1 18 HELIX 25 AC7 VAL A 145 ASN A 156 1 12 HELIX 26 AC8 THR A 165 ALA A 167 5 3 HELIX 27 AC9 GLU A 168 THR A 175 1 8 HELIX 28 AD1 PRO A 177 ILE A 181 5 5 HELIX 29 AD2 GLY A 185 MET A 195 1 11 HELIX 30 AD3 THR A 199 LYS A 205 1 7 HELIX 31 AD4 ASP A 207 GLY A 216 1 10 HELIX 32 AD5 GLY A 216 GLN A 227 1 12 HELIX 33 AD6 HIS A 255 LYS A 278 1 24 HELIX 34 AD7 ASN A 308 ARG A 324 1 17 SHEET 1 AA1 5 ILE F 97 SER F 101 0 SHEET 2 AA1 5 GLU F 104 ASP F 108 -1 O TYR F 106 N GLU F 98 SHEET 3 AA1 5 ILE F 4 MET F 9 -1 N ILE F 5 O LEU F 107 SHEET 4 AA1 5 ALA F 138 ALA F 143 -1 O ALA F 143 N ILE F 4 SHEET 5 AA1 5 GLN F 161 VAL F 163 1 O PHE F 162 N VAL F 142 SHEET 1 AA2 3 ILE F 41 ALA F 44 0 SHEET 2 AA2 3 ILE F 29 GLY F 32 -1 N ILE F 31 O SER F 42 SHEET 3 AA2 3 THR F 70 LEU F 72 1 O LEU F 72 N ALA F 30 SHEET 1 AA3 4 SER F 242 ILE F 253 0 SHEET 2 AA3 4 VAL F 329 THR F 337 -1 O LEU F 334 N VAL F 245 SHEET 3 AA3 4 ARG F 285 PHE F 292 -1 N LYS F 289 O GLY F 333 SHEET 4 AA3 4 GLN F 297 VAL F 303 -1 O HIS F 302 N GLN F 286 SHEET 1 AA4 5 ILE A 97 SER A 101 0 SHEET 2 AA4 5 GLU A 104 ASP A 108 -1 O TYR A 106 N GLU A 98 SHEET 3 AA4 5 ILE A 4 MET A 9 -1 N ILE A 5 O LEU A 107 SHEET 4 AA4 5 ALA A 138 ALA A 143 -1 O SER A 139 N ASP A 8 SHEET 5 AA4 5 GLN A 161 VAL A 163 1 O PHE A 162 N VAL A 142 SHEET 1 AA5 3 ILE A 41 ALA A 44 0 SHEET 2 AA5 3 ILE A 29 GLY A 32 -1 N ILE A 31 O SER A 42 SHEET 3 AA5 3 THR A 70 LEU A 72 1 O LEU A 72 N ALA A 30 SHEET 1 AA6 4 SER A 242 ILE A 253 0 SHEET 2 AA6 4 VAL A 329 THR A 337 -1 O LEU A 334 N VAL A 245 SHEET 3 AA6 4 ARG A 285 PHE A 292 -1 N LYS A 291 O ARG A 330 SHEET 4 AA6 4 GLN A 297 VAL A 303 -1 O THR A 298 N LEU A 290 LINK O3'A DC C 873 PA ATTP C 901 1555 1555 1.73 LINK OD1AASP F 8 MG MG F 901 1555 1555 2.31 LINK OD1BASP F 8 MG MG F 901 1555 1555 2.44 LINK OD1BASP F 8 MG MG F 902 1555 1555 2.66 LINK OD2AASP F 8 MG MG F 902 1555 1555 2.42 LINK O MET F 9 MG MG F 901 1555 1555 2.35 LINK OD2 ASP F 103 MG MG F 901 1555 1555 2.25 LINK OD1 ASP F 103 MG MG F 902 1555 1555 2.30 LINK OE2 GLU F 104 MG MG F 902 1555 1555 2.09 LINK MG MG F 901 O1 DPO F 903 1555 1555 2.34 LINK MG MG F 901 O7 DPO F 903 1555 1555 2.50 LINK MG MG F 901 OP1 DT H 874 1555 1555 2.21 LINK MG MG F 902 O HOH F1015 1555 1555 2.52 LINK MG MG F 902 O3' DC H 873 1555 1555 2.51 LINK MG MG F 902 OP1 DT H 874 1555 1555 2.17 LINK OD1 ASP A 8 MG MG A 901 1555 1555 2.80 LINK OD2 ASP A 8 MG MG A 901 1555 1555 2.67 LINK OD1 ASP A 8 MG MG A 902 1555 1555 2.09 LINK O MET A 9 MG MG A 901 1555 1555 2.29 LINK OD2 ASP A 103 MG MG A 901 1555 1555 2.35 LINK OD1 ASP A 103 MG MG A 902 1555 1555 2.28 LINK OE1 GLU A 104 MG MG A 902 1555 1555 1.93 LINK MG MG A 901 O2 BDPO A 903 1555 1555 2.39 LINK MG MG A 901 O6 BDPO A 903 1555 1555 2.63 LINK MG MG A 901 OP1B DT C 874 1555 1555 2.17 LINK MG MG A 901 O2AATTP C 901 1555 1555 2.06 LINK MG MG A 901 O2BATTP C 901 1555 1555 2.05 LINK MG MG A 901 O3GATTP C 901 1555 1555 2.48 LINK MG MG A 902 O3'A DC C 873 1555 1555 2.64 LINK MG MG A 902 O3'B DC C 873 1555 1555 2.64 LINK MG MG A 902 OP1B DT C 874 1555 1555 2.27 LINK MG MG A 902 O2AATTP C 901 1555 1555 2.13 CISPEP 1 LYS F 157 PRO F 158 0 -4.56 CISPEP 2 LYS A 157 PRO A 158 0 -6.17 SITE 1 AC1 6 ASP F 8 MET F 9 ASP F 103 MG F 902 SITE 2 AC1 6 DPO F 903 DT H 874 SITE 1 AC2 7 ASP F 8 ASP F 103 GLU F 104 MG F 901 SITE 2 AC2 7 HOH F1015 DC H 873 DT H 874 SITE 1 AC3 14 ASP F 8 MET F 9 ASP F 10 CYS F 11 SITE 2 AC3 14 PHE F 12 THR F 43 ARG F 49 ASP F 103 SITE 3 AC3 14 LYS F 157 MG F 901 HOH F1032 HOH F1034 SITE 4 AC3 14 HOH F1057 DT H 874 SITE 1 AC4 7 ASP A 8 MET A 9 ASP A 103 MG A 902 SITE 2 AC4 7 DPO A 903 DT C 874 TTP C 901 SITE 1 AC5 7 ASP A 8 ASP A 103 GLU A 104 MG A 901 SITE 2 AC5 7 DC C 873 DT C 874 TTP C 901 SITE 1 AC6 13 ASP A 8 MET A 9 ASP A 10 CYS A 11 SITE 2 AC6 13 PHE A 12 THR A 43 ARG A 49 ASP A 103 SITE 3 AC6 13 LYS A 157 MG A 901 HOH A1011 DT C 874 SITE 4 AC6 13 TTP C 901 SITE 1 AC7 25 ASP A 8 MET A 9 ASP A 10 CYS A 11 SITE 2 AC7 25 PHE A 12 PHE A 13 SER A 42 THR A 43 SITE 3 AC7 25 ARG A 49 ASP A 103 GLU A 104 LYS A 150 SITE 4 AC7 25 LYS A 157 MG A 901 MG A 902 DPO A 903 SITE 5 AC7 25 HOH A1011 DA B 840 DG B 841 DG B 842 SITE 6 AC7 25 DC C 872 DT C 874 HOH C1020 HOH C1029 SITE 7 AC7 25 HOH C1032 CRYST1 86.090 57.130 110.300 90.00 94.33 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011616 0.000000 0.000880 0.00000 SCALE2 0.000000 0.017504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009092 0.00000