HEADER PROTEIN TRANSPORT/RNA BINDING PROTEIN 25-NOV-17 5YVH TITLE CRYSTAL STRUCTURE OF KARYOPHERIN BETA2 IN COMPLEX WITH FUS(371-526) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSPORTIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TRUNCATED RESIDUES 345-375 REPLACED WITH GGSGGSG; COMPND 5 SYNONYM: IMPORTIN BETA-2,KARYOPHERIN BETA-2,M9 REGION INTERACTION COMPND 6 PROTEIN,MIP; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RNA-BINDING PROTEIN FUS; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: ARG/GLY-RICH DOMAIN; COMPND 12 SYNONYM: 75 KDA DNA-PAIRING PROTEIN,ONCOGENE FUS,ONCOGENE TLS,POMP75, COMPND 13 TRANSLOCATED IN LIPOSARCOMA PROTEIN; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TNPO1, KPNB2, MIP1, TRN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: FUS, TLS; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS IMPORTIN FAMILY, TRANSPORT PROTEIN, PROTEIN TRANSPORT-RNA BINDING KEYWDS 2 PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.YOSHIZAWA,H.Y.J.FUNG,Y.M.CHOOK REVDAT 2 22-NOV-23 5YVH 1 REMARK REVDAT 1 16-MAY-18 5YVH 0 JRNL AUTH T.YOSHIZAWA,R.ALI,J.JIOU,H.Y.J.FUNG,K.A.BURKE,S.J.KIM,Y.LIN, JRNL AUTH 2 W.B.PEEPLES,D.SALTZBERG,M.SONIAT,J.M.BAUMHARDT,R.OLDENBOURG, JRNL AUTH 3 A.SALI,N.L.FAWZI,M.K.ROSEN,Y.M.CHOOK JRNL TITL NUCLEAR IMPORT RECEPTOR INHIBITS PHASE SEPARATION OF FUS JRNL TITL 2 THROUGH BINDING TO MULTIPLE SITES. JRNL REF CELL V. 173 693 2018 JRNL REFN ISSN 1097-4172 JRNL PMID 29677513 JRNL DOI 10.1016/J.CELL.2018.03.003 REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.3 REMARK 3 NUMBER OF REFLECTIONS : 21445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1071 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3586 - 6.2935 0.98 3042 159 0.2048 0.2452 REMARK 3 2 6.2935 - 4.9981 1.00 2951 155 0.2283 0.2648 REMARK 3 3 4.9981 - 4.3671 1.00 2912 153 0.1910 0.2452 REMARK 3 4 4.3671 - 3.9682 1.00 2883 152 0.1924 0.2413 REMARK 3 5 3.9682 - 3.6840 1.00 2876 152 0.2150 0.2675 REMARK 3 6 3.6840 - 3.4669 0.93 2670 141 0.2290 0.3084 REMARK 3 7 3.4669 - 3.2933 0.76 2179 114 0.2556 0.2844 REMARK 3 8 3.2933 - 3.1500 0.30 861 45 0.2750 0.3577 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6760 REMARK 3 ANGLE : 1.160 9167 REMARK 3 CHIRALITY : 0.070 1045 REMARK 3 PLANARITY : 0.008 1179 REMARK 3 DIHEDRAL : 16.088 2553 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 29.5799 41.2374 30.2869 REMARK 3 T TENSOR REMARK 3 T11: 0.6133 T22: 0.5301 REMARK 3 T33: 0.3952 T12: 0.0101 REMARK 3 T13: -0.0054 T23: -0.0499 REMARK 3 L TENSOR REMARK 3 L11: 2.1981 L22: 1.2165 REMARK 3 L33: 1.0144 L12: -0.3987 REMARK 3 L13: 0.7041 L23: -0.7015 REMARK 3 S TENSOR REMARK 3 S11: 0.0827 S12: -0.1829 S13: -0.2062 REMARK 3 S21: -0.0982 S22: 0.0218 S23: 0.1388 REMARK 3 S31: 0.0939 S32: -0.0651 S33: -0.0856 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YVH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300005975. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25064 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.340 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4FDD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8M SUCCINIC ACID PH7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 64.71250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 78.26600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 64.71250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 78.26600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 TYR A 3 REMARK 465 GLU A 4 REMARK 465 LEU A 341 REMARK 465 LEU A 342 REMARK 465 LYS A 343 REMARK 465 GLY A 344 REMARK 465 ASP A 345 REMARK 465 VAL A 346 REMARK 465 GLU A 347 REMARK 465 GLU A 348 REMARK 465 ASP A 349 REMARK 465 GLU A 350 REMARK 465 THR A 351 REMARK 465 ILE A 352 REMARK 465 PRO A 353 REMARK 465 ASP A 354 REMARK 465 SER A 355 REMARK 465 GLU A 356 REMARK 465 GLN A 357 REMARK 465 ASP A 358 REMARK 465 ILE A 359 REMARK 465 ARG A 360 REMARK 465 GLY A 361 REMARK 465 GLY A 362 REMARK 465 SER A 363 REMARK 465 GLY A 364 REMARK 465 GLY A 365 REMARK 465 SER A 366 REMARK 465 GLY A 367 REMARK 465 ASP A 368 REMARK 465 THR A 369 REMARK 465 ILE A 370 REMARK 465 SER A 371 REMARK 465 GLY A 740 REMARK 465 ILE A 741 REMARK 465 GLU A 742 REMARK 465 GLU A 785 REMARK 465 VAL A 786 REMARK 465 ALA A 787 REMARK 465 PRO A 788 REMARK 465 MET A 789 REMARK 465 LEU A 790 REMARK 465 GLN A 791 REMARK 465 SER A 826 REMARK 465 GLY A 827 REMARK 465 VAL A 828 REMARK 465 ILE A 829 REMARK 465 GLN A 830 REMARK 465 VAL A 864 REMARK 465 GLY A 865 REMARK 465 ASP A 866 REMARK 465 GLU A 867 REMARK 465 ASN A 868 REMARK 465 TRP A 869 REMARK 465 VAL A 890 REMARK 465 GLY B 369 REMARK 465 SER B 370 REMARK 465 ARG B 371 REMARK 465 ARG B 372 REMARK 465 ALA B 373 REMARK 465 ASP B 374 REMARK 465 PHE B 375 REMARK 465 ASN B 376 REMARK 465 ARG B 377 REMARK 465 GLY B 378 REMARK 465 GLY B 379 REMARK 465 GLY B 380 REMARK 465 ASN B 381 REMARK 465 GLY B 382 REMARK 465 ARG B 383 REMARK 465 GLY B 384 REMARK 465 GLY B 385 REMARK 465 ARG B 386 REMARK 465 GLY B 387 REMARK 465 ARG B 388 REMARK 465 GLY B 389 REMARK 465 GLY B 390 REMARK 465 PRO B 391 REMARK 465 MET B 392 REMARK 465 GLY B 393 REMARK 465 ARG B 394 REMARK 465 GLY B 395 REMARK 465 GLY B 396 REMARK 465 TYR B 397 REMARK 465 GLY B 398 REMARK 465 GLY B 399 REMARK 465 GLY B 400 REMARK 465 GLY B 401 REMARK 465 SER B 402 REMARK 465 GLY B 403 REMARK 465 GLY B 404 REMARK 465 GLY B 405 REMARK 465 GLY B 406 REMARK 465 ARG B 407 REMARK 465 GLY B 408 REMARK 465 GLY B 409 REMARK 465 PHE B 410 REMARK 465 PRO B 411 REMARK 465 SER B 412 REMARK 465 GLY B 413 REMARK 465 GLY B 414 REMARK 465 GLY B 415 REMARK 465 GLY B 416 REMARK 465 GLY B 417 REMARK 465 GLY B 418 REMARK 465 GLY B 419 REMARK 465 GLN B 420 REMARK 465 GLN B 421 REMARK 465 ARG B 422 REMARK 465 ALA B 423 REMARK 465 GLY B 424 REMARK 465 ASP B 425 REMARK 465 TRP B 426 REMARK 465 LYS B 427 REMARK 465 CYS B 428 REMARK 465 PRO B 429 REMARK 465 ASN B 430 REMARK 465 PRO B 431 REMARK 465 THR B 432 REMARK 465 CYS B 433 REMARK 465 GLU B 434 REMARK 465 ASN B 435 REMARK 465 MET B 436 REMARK 465 ASN B 437 REMARK 465 PHE B 438 REMARK 465 SER B 439 REMARK 465 TRP B 440 REMARK 465 ARG B 441 REMARK 465 ASN B 442 REMARK 465 GLU B 443 REMARK 465 CYS B 444 REMARK 465 ASN B 445 REMARK 465 GLN B 446 REMARK 465 CYS B 447 REMARK 465 LYS B 448 REMARK 465 ALA B 449 REMARK 465 PRO B 450 REMARK 465 LYS B 451 REMARK 465 PRO B 452 REMARK 465 ASP B 453 REMARK 465 GLY B 454 REMARK 465 PRO B 455 REMARK 465 GLY B 456 REMARK 465 GLY B 457 REMARK 465 GLY B 458 REMARK 465 PRO B 459 REMARK 465 GLY B 460 REMARK 465 GLY B 461 REMARK 465 SER B 462 REMARK 465 HIS B 463 REMARK 465 MET B 464 REMARK 465 GLY B 465 REMARK 465 GLY B 466 REMARK 465 ASN B 467 REMARK 465 TYR B 468 REMARK 465 GLY B 469 REMARK 465 ASP B 470 REMARK 465 ASP B 471 REMARK 465 ARG B 472 REMARK 465 ARG B 473 REMARK 465 GLY B 474 REMARK 465 GLY B 475 REMARK 465 ARG B 476 REMARK 465 GLY B 477 REMARK 465 GLY B 478 REMARK 465 TYR B 479 REMARK 465 ASP B 480 REMARK 465 ARG B 481 REMARK 465 GLY B 482 REMARK 465 GLY B 483 REMARK 465 TYR B 484 REMARK 465 ARG B 485 REMARK 465 GLY B 486 REMARK 465 ARG B 487 REMARK 465 GLY B 488 REMARK 465 GLY B 489 REMARK 465 ASP B 490 REMARK 465 ARG B 491 REMARK 465 GLY B 492 REMARK 465 GLY B 493 REMARK 465 PHE B 494 REMARK 465 ARG B 495 REMARK 465 GLY B 496 REMARK 465 GLY B 497 REMARK 465 ARG B 498 REMARK 465 GLY B 499 REMARK 465 GLY B 500 REMARK 465 GLY B 501 REMARK 465 ASP B 502 REMARK 465 ARG B 503 REMARK 465 GLY B 504 REMARK 465 GLY B 505 REMARK 465 PHE B 506 REMARK 465 GLY B 507 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 154 OD1 ASP A 158 2.06 REMARK 500 OE1 GLU A 588 NH2 ARG B 521 2.09 REMARK 500 O VAL A 781 CD PRO A 783 2.10 REMARK 500 O THR A 763 N LYS A 765 2.11 REMARK 500 OD2 ASP A 384 OH TYR B 526 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 250 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 LEU A 602 CB - CG - CD1 ANGL. DEV. = 10.4 DEGREES REMARK 500 PHE A 835 C - N - CA ANGL. DEV. = 19.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 78 -6.42 -148.56 REMARK 500 HIS A 79 10.19 -143.63 REMARK 500 SER A 119 -72.45 -55.95 REMARK 500 LEU A 123 -11.36 -48.44 REMARK 500 GLU A 161 40.43 -75.42 REMARK 500 ASP A 169 79.38 55.52 REMARK 500 ARG A 170 70.34 50.30 REMARK 500 ARG A 246 57.70 -119.88 REMARK 500 ARG A 391 -127.55 47.09 REMARK 500 CYS A 512 -123.76 53.45 REMARK 500 GLN A 534 -167.51 -75.14 REMARK 500 ASP A 582 -6.77 -55.66 REMARK 500 GLN A 598 -97.54 14.38 REMARK 500 LEU A 602 -51.67 -28.26 REMARK 500 ASN A 658 0.09 -69.98 REMARK 500 CYS A 698 75.24 -153.71 REMARK 500 VAL A 750 -34.24 -139.08 REMARK 500 THR A 763 39.45 73.33 REMARK 500 PRO A 764 52.32 -51.40 REMARK 500 LYS A 765 -111.87 -146.12 REMARK 500 LEU A 778 8.07 -58.97 REMARK 500 TYR A 780 37.45 -85.53 REMARK 500 PHE A 793 0.34 -155.07 REMARK 500 PHE A 832 53.44 -65.93 REMARK 500 ILE A 833 65.85 -157.59 REMARK 500 PHE A 835 -45.25 -133.87 REMARK 500 ASN A 844 78.88 57.01 REMARK 500 LEU A 884 39.06 -82.33 REMARK 500 ALA A 885 -31.80 -134.11 REMARK 500 REMARK 500 REMARK: NULL DBREF 5YVH A 1 360 UNP Q92973 TNPO1_HUMAN 9 344 DBREF 5YVH A 368 890 UNP Q92973 TNPO1_HUMAN 376 898 DBREF 5YVH B 371 526 UNP P35637 FUS_HUMAN 371 526 SEQADV 5YVH GLY A -1 UNP Q92973 EXPRESSION TAG SEQADV 5YVH SER A 0 UNP Q92973 EXPRESSION TAG SEQADV 5YVH GLY A 361 UNP Q92973 LINKER SEQADV 5YVH GLY A 362 UNP Q92973 LINKER SEQADV 5YVH SER A 363 UNP Q92973 LINKER SEQADV 5YVH GLY A 364 UNP Q92973 LINKER SEQADV 5YVH GLY A 365 UNP Q92973 LINKER SEQADV 5YVH SER A 366 UNP Q92973 LINKER SEQADV 5YVH GLY A 367 UNP Q92973 LINKER SEQADV 5YVH GLY B 369 UNP P35637 EXPRESSION TAG SEQADV 5YVH SER B 370 UNP P35637 EXPRESSION TAG SEQRES 1 A 868 GLY SER MET GLU TYR GLU TRP LYS PRO ASP GLU GLN GLY SEQRES 2 A 868 LEU GLN GLN ILE LEU GLN LEU LEU LYS GLU SER GLN SER SEQRES 3 A 868 PRO ASP THR THR ILE GLN ARG THR VAL GLN GLN LYS LEU SEQRES 4 A 868 GLU GLN LEU ASN GLN TYR PRO ASP PHE ASN ASN TYR LEU SEQRES 5 A 868 ILE PHE VAL LEU THR LYS LEU LYS SER GLU ASP GLU PRO SEQRES 6 A 868 THR ARG SER LEU SER GLY LEU ILE LEU LYS ASN ASN VAL SEQRES 7 A 868 LYS ALA HIS PHE GLN ASN PHE PRO ASN GLY VAL THR ASP SEQRES 8 A 868 PHE ILE LYS SER GLU CYS LEU ASN ASN ILE GLY ASP SER SEQRES 9 A 868 SER PRO LEU ILE ARG ALA THR VAL GLY ILE LEU ILE THR SEQRES 10 A 868 THR ILE ALA SER LYS GLY GLU LEU GLN ASN TRP PRO ASP SEQRES 11 A 868 LEU LEU PRO LYS LEU CYS SER LEU LEU ASP SER GLU ASP SEQRES 12 A 868 TYR ASN THR CYS GLU GLY ALA PHE GLY ALA LEU GLN LYS SEQRES 13 A 868 ILE CYS GLU ASP SER ALA GLU ILE LEU ASP SER ASP VAL SEQRES 14 A 868 LEU ASP ARG PRO LEU ASN ILE MET ILE PRO LYS PHE LEU SEQRES 15 A 868 GLN PHE PHE LYS HIS SER SER PRO LYS ILE ARG SER HIS SEQRES 16 A 868 ALA VAL ALA CYS VAL ASN GLN PHE ILE ILE SER ARG THR SEQRES 17 A 868 GLN ALA LEU MET LEU HIS ILE ASP SER PHE ILE GLU ASN SEQRES 18 A 868 LEU PHE ALA LEU ALA GLY ASP GLU GLU PRO GLU VAL ARG SEQRES 19 A 868 LYS ASN VAL CYS ARG ALA LEU VAL MET LEU LEU GLU VAL SEQRES 20 A 868 ARG MET ASP ARG LEU LEU PRO HIS MET HIS ASN ILE VAL SEQRES 21 A 868 GLU TYR MET LEU GLN ARG THR GLN ASP GLN ASP GLU ASN SEQRES 22 A 868 VAL ALA LEU GLU ALA CYS GLU PHE TRP LEU THR LEU ALA SEQRES 23 A 868 GLU GLN PRO ILE CYS LYS ASP VAL LEU VAL ARG HIS LEU SEQRES 24 A 868 PRO LYS LEU ILE PRO VAL LEU VAL ASN GLY MET LYS TYR SEQRES 25 A 868 SER ASP ILE ASP ILE ILE LEU LEU LYS GLY ASP VAL GLU SEQRES 26 A 868 GLU ASP GLU THR ILE PRO ASP SER GLU GLN ASP ILE ARG SEQRES 27 A 868 GLY GLY SER GLY GLY SER GLY ASP THR ILE SER ASP TRP SEQRES 28 A 868 ASN LEU ARG LYS CYS SER ALA ALA ALA LEU ASP VAL LEU SEQRES 29 A 868 ALA ASN VAL TYR ARG ASP GLU LEU LEU PRO HIS ILE LEU SEQRES 30 A 868 PRO LEU LEU LYS GLU LEU LEU PHE HIS HIS GLU TRP VAL SEQRES 31 A 868 VAL LYS GLU SER GLY ILE LEU VAL LEU GLY ALA ILE ALA SEQRES 32 A 868 GLU GLY CYS MET GLN GLY MET ILE PRO TYR LEU PRO GLU SEQRES 33 A 868 LEU ILE PRO HIS LEU ILE GLN CYS LEU SER ASP LYS LYS SEQRES 34 A 868 ALA LEU VAL ARG SER ILE THR CYS TRP THR LEU SER ARG SEQRES 35 A 868 TYR ALA HIS TRP VAL VAL SER GLN PRO PRO ASP THR TYR SEQRES 36 A 868 LEU LYS PRO LEU MET THR GLU LEU LEU LYS ARG ILE LEU SEQRES 37 A 868 ASP SER ASN LYS ARG VAL GLN GLU ALA ALA CYS SER ALA SEQRES 38 A 868 PHE ALA THR LEU GLU GLU GLU ALA CYS THR GLU LEU VAL SEQRES 39 A 868 PRO TYR LEU ALA TYR ILE LEU ASP THR LEU VAL PHE ALA SEQRES 40 A 868 PHE SER LYS TYR GLN HIS LYS ASN LEU LEU ILE LEU TYR SEQRES 41 A 868 ASP ALA ILE GLY THR LEU ALA ASP SER VAL GLY HIS HIS SEQRES 42 A 868 LEU ASN LYS PRO GLU TYR ILE GLN MET LEU MET PRO PRO SEQRES 43 A 868 LEU ILE GLN LYS TRP ASN MET LEU LYS ASP GLU ASP LYS SEQRES 44 A 868 ASP LEU PHE PRO LEU LEU GLU CYS LEU SER SER VAL ALA SEQRES 45 A 868 THR ALA LEU GLN SER GLY PHE LEU PRO TYR CYS GLU PRO SEQRES 46 A 868 VAL TYR GLN ARG CYS VAL ASN LEU VAL GLN LYS THR LEU SEQRES 47 A 868 ALA GLN ALA MET LEU ASN ASN ALA GLN PRO ASP GLN TYR SEQRES 48 A 868 GLU ALA PRO ASP LYS ASP PHE MET ILE VAL ALA LEU ASP SEQRES 49 A 868 LEU LEU SER GLY LEU ALA GLU GLY LEU GLY GLY ASN ILE SEQRES 50 A 868 GLU GLN LEU VAL ALA ARG SER ASN ILE LEU THR LEU MET SEQRES 51 A 868 TYR GLN CYS MET GLN ASP LYS MET PRO GLU VAL ARG GLN SEQRES 52 A 868 SER SER PHE ALA LEU LEU GLY ASP LEU THR LYS ALA CYS SEQRES 53 A 868 PHE GLN HIS VAL LYS PRO CYS ILE ALA ASP PHE MET PRO SEQRES 54 A 868 ILE LEU GLY THR ASN LEU ASN PRO GLU PHE ILE SER VAL SEQRES 55 A 868 CYS ASN ASN ALA THR TRP ALA ILE GLY GLU ILE SER ILE SEQRES 56 A 868 GLN MET GLY ILE GLU MET GLN PRO TYR ILE PRO MET VAL SEQRES 57 A 868 LEU HIS GLN LEU VAL GLU ILE ILE ASN ARG PRO ASN THR SEQRES 58 A 868 PRO LYS THR LEU LEU GLU ASN THR ALA ILE THR ILE GLY SEQRES 59 A 868 ARG LEU GLY TYR VAL CYS PRO GLN GLU VAL ALA PRO MET SEQRES 60 A 868 LEU GLN GLN PHE ILE ARG PRO TRP CYS THR SER LEU ARG SEQRES 61 A 868 ASN ILE ARG ASP ASN GLU GLU LYS ASP SER ALA PHE ARG SEQRES 62 A 868 GLY ILE CYS THR MET ILE SER VAL ASN PRO SER GLY VAL SEQRES 63 A 868 ILE GLN ASP PHE ILE PHE PHE CYS ASP ALA VAL ALA SER SEQRES 64 A 868 TRP ILE ASN PRO LYS ASP ASP LEU ARG ASP MET PHE CYS SEQRES 65 A 868 LYS ILE LEU HIS GLY PHE LYS ASN GLN VAL GLY ASP GLU SEQRES 66 A 868 ASN TRP ARG ARG PHE SER ASP GLN PHE PRO LEU PRO LEU SEQRES 67 A 868 LYS GLU ARG LEU ALA ALA PHE TYR GLY VAL SEQRES 1 B 158 GLY SER ARG ARG ALA ASP PHE ASN ARG GLY GLY GLY ASN SEQRES 2 B 158 GLY ARG GLY GLY ARG GLY ARG GLY GLY PRO MET GLY ARG SEQRES 3 B 158 GLY GLY TYR GLY GLY GLY GLY SER GLY GLY GLY GLY ARG SEQRES 4 B 158 GLY GLY PHE PRO SER GLY GLY GLY GLY GLY GLY GLY GLN SEQRES 5 B 158 GLN ARG ALA GLY ASP TRP LYS CYS PRO ASN PRO THR CYS SEQRES 6 B 158 GLU ASN MET ASN PHE SER TRP ARG ASN GLU CYS ASN GLN SEQRES 7 B 158 CYS LYS ALA PRO LYS PRO ASP GLY PRO GLY GLY GLY PRO SEQRES 8 B 158 GLY GLY SER HIS MET GLY GLY ASN TYR GLY ASP ASP ARG SEQRES 9 B 158 ARG GLY GLY ARG GLY GLY TYR ASP ARG GLY GLY TYR ARG SEQRES 10 B 158 GLY ARG GLY GLY ASP ARG GLY GLY PHE ARG GLY GLY ARG SEQRES 11 B 158 GLY GLY GLY ASP ARG GLY GLY PHE GLY PRO GLY LYS MET SEQRES 12 B 158 ASP SER ARG GLY GLU HIS ARG GLN ASP ARG ARG GLU ARG SEQRES 13 B 158 PRO TYR HELIX 1 AA1 ASP A 8 GLN A 23 1 16 HELIX 2 AA2 ASP A 26 ASN A 41 1 16 HELIX 3 AA3 TYR A 43 LYS A 56 1 14 HELIX 4 AA4 ASP A 61 VAL A 76 1 16 HELIX 5 AA5 LYS A 77 ALA A 78 5 2 HELIX 6 AA6 HIS A 79 PHE A 83 5 5 HELIX 7 AA7 PRO A 84 ILE A 99 1 16 HELIX 8 AA8 SER A 103 GLY A 121 1 19 HELIX 9 AA9 ASP A 128 ASP A 138 1 11 HELIX 10 AB1 ASP A 141 SER A 159 1 19 HELIX 11 AB2 ILE A 174 PHE A 182 1 9 HELIX 12 AB3 SER A 187 GLN A 200 1 14 HELIX 13 AB4 THR A 206 LEU A 211 1 6 HELIX 14 AB5 HIS A 212 GLY A 225 1 14 HELIX 15 AB6 GLU A 228 ARG A 246 1 19 HELIX 16 AB7 ARG A 246 LEU A 251 1 6 HELIX 17 AB8 HIS A 253 GLN A 266 1 14 HELIX 18 AB9 ASP A 269 ALA A 284 1 16 HELIX 19 AC1 ILE A 288 VAL A 294 1 7 HELIX 20 AC2 HIS A 296 MET A 308 1 13 HELIX 21 AC3 ASN A 374 ARG A 391 1 18 HELIX 22 AC4 LEU A 394 LEU A 406 1 13 HELIX 23 AC5 GLU A 410 ILE A 424 1 15 HELIX 24 AC6 ILE A 424 ILE A 433 1 10 HELIX 25 AC7 TYR A 435 LEU A 447 1 13 HELIX 26 AC8 LYS A 451 TYR A 465 1 15 HELIX 27 AC9 TYR A 465 GLN A 472 1 8 HELIX 28 AD1 TYR A 477 LEU A 490 1 14 HELIX 29 AD2 ASN A 493 CYS A 512 1 20 HELIX 30 AD3 THR A 513 PRO A 517 5 5 HELIX 31 AD4 TYR A 518 TYR A 533 1 16 HELIX 32 AD5 GLN A 534 GLY A 553 1 20 HELIX 33 AD6 HIS A 554 ASN A 557 5 4 HELIX 34 AD7 LYS A 558 LEU A 576 1 19 HELIX 35 AD8 ASP A 582 GLN A 598 1 17 HELIX 36 AD9 PHE A 601 GLN A 629 1 29 HELIX 37 AE1 LYS A 638 GLY A 656 1 19 HELIX 38 AE2 ILE A 659 ARG A 665 1 7 HELIX 39 AE3 ASN A 667 MET A 676 1 10 HELIX 40 AE4 MET A 680 CYS A 698 1 19 HELIX 41 AE5 PHE A 699 PRO A 704 5 6 HELIX 42 AE6 CYS A 705 ASN A 716 1 12 HELIX 43 AE7 PHE A 721 MET A 739 1 19 HELIX 44 AE8 MET A 743 TYR A 746 5 4 HELIX 45 AE9 ILE A 747 ASN A 759 1 13 HELIX 46 AF1 LYS A 765 LEU A 778 1 14 HELIX 47 AF2 PHE A 793 ASN A 803 1 11 HELIX 48 AF3 ASN A 807 ASN A 824 1 18 HELIX 49 AF4 PHE A 835 ALA A 840 1 6 HELIX 50 AF5 LYS A 846 GLN A 863 1 18 HELIX 51 AF6 PHE A 872 PHE A 876 5 5 HELIX 52 AF7 PRO A 877 PHE A 887 1 11 HELIX 53 AF8 SER B 513 ARG B 522 1 10 CRYST1 129.425 156.532 67.822 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007726 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006388 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014744 0.00000