HEADER TRANSFERASE 29-NOV-17 5YWE TITLE CRYSTAL STRUCTURE OF HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: H-PGDS,GST CLASS-SIGMA,GLUTATHIONE S-TRANSFERASE, COMPND 5 GLUTATHIONE-DEPENDENT PGD SYNTHASE,GLUTATHIONE-REQUIRING COMPND 6 PROSTAGLANDIN D SYNTHASE,PROSTAGLANDIN-H2 D-ISOMERASE; COMPND 7 EC: 5.3.99.2,2.5.1.18; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HPGDS, GSTS, PGDS, PTGDS2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROSTAGLANDIN D, SYNTHASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.KAMO,N.FURUBAYASHI,K.INAKA,K.ARITAKE,Y.URADE REVDAT 2 22-NOV-23 5YWE 1 LINK REVDAT 1 05-DEC-18 5YWE 0 JRNL AUTH K.INAKA,N.FURUBAYASHI,M.KAMO,K.ARITAKE,Y.URADE JRNL TITL CRYSTAL STRUCTURE OF HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE JRNL TITL 2 APO FORM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 77.0 REMARK 3 NUMBER OF REFLECTIONS : 65506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 3316 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3101 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 49.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 170 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6552 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 577 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.82000 REMARK 3 B22 (A**2) : 0.88000 REMARK 3 B33 (A**2) : -0.09000 REMARK 3 B12 (A**2) : 0.22000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.25000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.140 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.987 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6810 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6448 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9250 ; 1.195 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14824 ; 0.737 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 788 ; 5.311 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 332 ;35.966 ;24.217 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1168 ;12.554 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;14.164 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1014 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7600 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1608 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5YWE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300006024. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR , SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71217 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 88.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 79.7 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.31600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.0.05 REMARK 200 STARTING MODEL: 2CVD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% PEG 6000, 5 MM DTT, 2MM MGCL2, 2MM REMARK 280 GLUTATHIONE, 2% DIOXANE, 50 MM TRIS-HCL, PH 8.5, LIQUID REMARK 280 DIFFUSION, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 480 O HOH A 494 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 57 51.52 34.66 REMARK 500 GLN A 63 105.94 76.26 REMARK 500 GLN B 63 112.37 72.69 REMARK 500 GLN C 63 112.65 74.25 REMARK 500 LYS C 108 99.39 -63.88 REMARK 500 ASP D 57 49.73 37.24 REMARK 500 GLN D 63 107.62 76.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 424 O REMARK 620 2 HOH A 452 O 91.0 REMARK 620 3 HOH A 477 O 86.4 91.4 REMARK 620 4 HOH B 313 O 100.8 89.5 172.7 REMARK 620 5 HOH B 319 O 85.3 175.5 90.9 88.7 REMARK 620 6 HOH B 362 O 162.8 101.9 82.2 90.6 82.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 424 O REMARK 620 2 HOH C 434 O 88.0 REMARK 620 3 HOH C 449 O 88.7 86.5 REMARK 620 4 HOH D 335 O 84.7 100.3 170.3 REMARK 620 5 HOH D 371 O 171.0 88.3 99.3 87.9 REMARK 620 6 HOH D 372 O 91.6 172.3 85.8 87.3 93.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH D 202 DBREF 5YWE A 2 199 UNP O60760 HPGDS_HUMAN 2 199 DBREF 5YWE B 2 199 UNP O60760 HPGDS_HUMAN 2 199 DBREF 5YWE C 2 199 UNP O60760 HPGDS_HUMAN 2 199 DBREF 5YWE D 2 199 UNP O60760 HPGDS_HUMAN 2 199 SEQRES 1 A 198 PRO ASN TYR LYS LEU THR TYR PHE ASN MET ARG GLY ARG SEQRES 2 A 198 ALA GLU ILE ILE ARG TYR ILE PHE ALA TYR LEU ASP ILE SEQRES 3 A 198 GLN TYR GLU ASP HIS ARG ILE GLU GLN ALA ASP TRP PRO SEQRES 4 A 198 GLU ILE LYS SER THR LEU PRO PHE GLY LYS ILE PRO ILE SEQRES 5 A 198 LEU GLU VAL ASP GLY LEU THR LEU HIS GLN SER LEU ALA SEQRES 6 A 198 ILE ALA ARG TYR LEU THR LYS ASN THR ASP LEU ALA GLY SEQRES 7 A 198 ASN THR GLU MET GLU GLN CYS HIS VAL ASP ALA ILE VAL SEQRES 8 A 198 ASP THR LEU ASP ASP PHE MET SER CYS PHE PRO TRP ALA SEQRES 9 A 198 GLU LYS LYS GLN ASP VAL LYS GLU GLN MET PHE ASN GLU SEQRES 10 A 198 LEU LEU THR TYR ASN ALA PRO HIS LEU MET GLN ASP LEU SEQRES 11 A 198 ASP THR TYR LEU GLY GLY ARG GLU TRP LEU ILE GLY ASN SEQRES 12 A 198 SER VAL THR TRP ALA ASP PHE TYR TRP GLU ILE CYS SER SEQRES 13 A 198 THR THR LEU LEU VAL PHE LYS PRO ASP LEU LEU ASP ASN SEQRES 14 A 198 HIS PRO ARG LEU VAL THR LEU ARG LYS LYS VAL GLN ALA SEQRES 15 A 198 ILE PRO ALA VAL ALA ASN TRP ILE LYS ARG ARG PRO GLN SEQRES 16 A 198 THR LYS LEU SEQRES 1 B 198 PRO ASN TYR LYS LEU THR TYR PHE ASN MET ARG GLY ARG SEQRES 2 B 198 ALA GLU ILE ILE ARG TYR ILE PHE ALA TYR LEU ASP ILE SEQRES 3 B 198 GLN TYR GLU ASP HIS ARG ILE GLU GLN ALA ASP TRP PRO SEQRES 4 B 198 GLU ILE LYS SER THR LEU PRO PHE GLY LYS ILE PRO ILE SEQRES 5 B 198 LEU GLU VAL ASP GLY LEU THR LEU HIS GLN SER LEU ALA SEQRES 6 B 198 ILE ALA ARG TYR LEU THR LYS ASN THR ASP LEU ALA GLY SEQRES 7 B 198 ASN THR GLU MET GLU GLN CYS HIS VAL ASP ALA ILE VAL SEQRES 8 B 198 ASP THR LEU ASP ASP PHE MET SER CYS PHE PRO TRP ALA SEQRES 9 B 198 GLU LYS LYS GLN ASP VAL LYS GLU GLN MET PHE ASN GLU SEQRES 10 B 198 LEU LEU THR TYR ASN ALA PRO HIS LEU MET GLN ASP LEU SEQRES 11 B 198 ASP THR TYR LEU GLY GLY ARG GLU TRP LEU ILE GLY ASN SEQRES 12 B 198 SER VAL THR TRP ALA ASP PHE TYR TRP GLU ILE CYS SER SEQRES 13 B 198 THR THR LEU LEU VAL PHE LYS PRO ASP LEU LEU ASP ASN SEQRES 14 B 198 HIS PRO ARG LEU VAL THR LEU ARG LYS LYS VAL GLN ALA SEQRES 15 B 198 ILE PRO ALA VAL ALA ASN TRP ILE LYS ARG ARG PRO GLN SEQRES 16 B 198 THR LYS LEU SEQRES 1 C 198 PRO ASN TYR LYS LEU THR TYR PHE ASN MET ARG GLY ARG SEQRES 2 C 198 ALA GLU ILE ILE ARG TYR ILE PHE ALA TYR LEU ASP ILE SEQRES 3 C 198 GLN TYR GLU ASP HIS ARG ILE GLU GLN ALA ASP TRP PRO SEQRES 4 C 198 GLU ILE LYS SER THR LEU PRO PHE GLY LYS ILE PRO ILE SEQRES 5 C 198 LEU GLU VAL ASP GLY LEU THR LEU HIS GLN SER LEU ALA SEQRES 6 C 198 ILE ALA ARG TYR LEU THR LYS ASN THR ASP LEU ALA GLY SEQRES 7 C 198 ASN THR GLU MET GLU GLN CYS HIS VAL ASP ALA ILE VAL SEQRES 8 C 198 ASP THR LEU ASP ASP PHE MET SER CYS PHE PRO TRP ALA SEQRES 9 C 198 GLU LYS LYS GLN ASP VAL LYS GLU GLN MET PHE ASN GLU SEQRES 10 C 198 LEU LEU THR TYR ASN ALA PRO HIS LEU MET GLN ASP LEU SEQRES 11 C 198 ASP THR TYR LEU GLY GLY ARG GLU TRP LEU ILE GLY ASN SEQRES 12 C 198 SER VAL THR TRP ALA ASP PHE TYR TRP GLU ILE CYS SER SEQRES 13 C 198 THR THR LEU LEU VAL PHE LYS PRO ASP LEU LEU ASP ASN SEQRES 14 C 198 HIS PRO ARG LEU VAL THR LEU ARG LYS LYS VAL GLN ALA SEQRES 15 C 198 ILE PRO ALA VAL ALA ASN TRP ILE LYS ARG ARG PRO GLN SEQRES 16 C 198 THR LYS LEU SEQRES 1 D 198 PRO ASN TYR LYS LEU THR TYR PHE ASN MET ARG GLY ARG SEQRES 2 D 198 ALA GLU ILE ILE ARG TYR ILE PHE ALA TYR LEU ASP ILE SEQRES 3 D 198 GLN TYR GLU ASP HIS ARG ILE GLU GLN ALA ASP TRP PRO SEQRES 4 D 198 GLU ILE LYS SER THR LEU PRO PHE GLY LYS ILE PRO ILE SEQRES 5 D 198 LEU GLU VAL ASP GLY LEU THR LEU HIS GLN SER LEU ALA SEQRES 6 D 198 ILE ALA ARG TYR LEU THR LYS ASN THR ASP LEU ALA GLY SEQRES 7 D 198 ASN THR GLU MET GLU GLN CYS HIS VAL ASP ALA ILE VAL SEQRES 8 D 198 ASP THR LEU ASP ASP PHE MET SER CYS PHE PRO TRP ALA SEQRES 9 D 198 GLU LYS LYS GLN ASP VAL LYS GLU GLN MET PHE ASN GLU SEQRES 10 D 198 LEU LEU THR TYR ASN ALA PRO HIS LEU MET GLN ASP LEU SEQRES 11 D 198 ASP THR TYR LEU GLY GLY ARG GLU TRP LEU ILE GLY ASN SEQRES 12 D 198 SER VAL THR TRP ALA ASP PHE TYR TRP GLU ILE CYS SER SEQRES 13 D 198 THR THR LEU LEU VAL PHE LYS PRO ASP LEU LEU ASP ASN SEQRES 14 D 198 HIS PRO ARG LEU VAL THR LEU ARG LYS LYS VAL GLN ALA SEQRES 15 D 198 ILE PRO ALA VAL ALA ASN TRP ILE LYS ARG ARG PRO GLN SEQRES 16 D 198 THR LYS LEU HET GSH A 301 20 HET GOL A 302 6 HET GOL A 303 6 HET MG B 201 1 HET GSH B 202 20 HET GSH C 301 20 HET MG D 201 1 HET GSH D 202 20 HETNAM GSH GLUTATHIONE HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GSH 4(C10 H17 N3 O6 S) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 MG 2(MG 2+) FORMUL 13 HOH *577(H2 O) HELIX 1 AA1 ARG A 12 ARG A 14 5 3 HELIX 2 AA2 ALA A 15 ASP A 26 1 12 HELIX 3 AA3 GLU A 35 ALA A 37 5 3 HELIX 4 AA4 ASP A 38 SER A 44 1 7 HELIX 5 AA5 GLN A 63 LYS A 73 1 11 HELIX 6 AA6 THR A 81 SER A 100 1 20 HELIX 7 AA7 LYS A 108 ASN A 123 1 16 HELIX 8 AA8 ASN A 123 GLY A 136 1 14 HELIX 9 AA9 THR A 147 LYS A 164 1 18 HELIX 10 AB1 HIS A 171 ILE A 184 1 14 HELIX 11 AB2 ILE A 184 ARG A 194 1 11 HELIX 12 AB3 ARG B 12 ARG B 14 5 3 HELIX 13 AB4 ALA B 15 LEU B 25 1 11 HELIX 14 AB5 ASP B 38 SER B 44 1 7 HELIX 15 AB6 GLN B 63 LYS B 73 1 11 HELIX 16 AB7 THR B 81 PHE B 102 1 22 HELIX 17 AB8 LYS B 108 TYR B 122 1 15 HELIX 18 AB9 TYR B 122 GLY B 136 1 15 HELIX 19 AC1 THR B 147 LYS B 164 1 18 HELIX 20 AC2 HIS B 171 ILE B 184 1 14 HELIX 21 AC3 ILE B 184 ARG B 194 1 11 HELIX 22 AC4 ARG C 12 ARG C 14 5 3 HELIX 23 AC5 ALA C 15 LEU C 25 1 11 HELIX 24 AC6 ASP C 38 SER C 44 1 7 HELIX 25 AC7 GLN C 63 LYS C 73 1 11 HELIX 26 AC8 THR C 81 PHE C 102 1 22 HELIX 27 AC9 LYS C 108 TYR C 122 1 15 HELIX 28 AD1 TYR C 122 GLY C 136 1 15 HELIX 29 AD2 THR C 147 LYS C 164 1 18 HELIX 30 AD3 HIS C 171 ILE C 184 1 14 HELIX 31 AD4 ILE C 184 ARG C 194 1 11 HELIX 32 AD5 ARG D 12 ARG D 14 5 3 HELIX 33 AD6 ALA D 15 ASP D 26 1 12 HELIX 34 AD7 GLU D 35 ALA D 37 5 3 HELIX 35 AD8 ASP D 38 SER D 44 1 7 HELIX 36 AD9 GLN D 63 LYS D 73 1 11 HELIX 37 AE1 THR D 81 SER D 100 1 20 HELIX 38 AE2 LYS D 108 ASN D 123 1 16 HELIX 39 AE3 ASN D 123 GLY D 136 1 14 HELIX 40 AE4 THR D 147 LYS D 164 1 18 HELIX 41 AE5 HIS D 171 ILE D 184 1 14 HELIX 42 AE6 ILE D 184 ARG D 194 1 11 SHEET 1 AA1 4 GLU A 30 ILE A 34 0 SHEET 2 AA1 4 TYR A 4 PHE A 9 1 N LEU A 6 O GLU A 30 SHEET 3 AA1 4 ILE A 53 VAL A 56 -1 O GLU A 55 N LYS A 5 SHEET 4 AA1 4 LEU A 59 HIS A 62 -1 O LEU A 59 N VAL A 56 SHEET 1 AA2 4 GLU B 30 ILE B 34 0 SHEET 2 AA2 4 TYR B 4 PHE B 9 1 N TYR B 8 O ILE B 34 SHEET 3 AA2 4 ILE B 53 VAL B 56 -1 O GLU B 55 N LYS B 5 SHEET 4 AA2 4 LEU B 59 HIS B 62 -1 O LEU B 61 N LEU B 54 SHEET 1 AA3 4 GLU C 30 ILE C 34 0 SHEET 2 AA3 4 TYR C 4 PHE C 9 1 N TYR C 8 O ILE C 34 SHEET 3 AA3 4 ILE C 53 VAL C 56 -1 O GLU C 55 N LYS C 5 SHEET 4 AA3 4 LEU C 59 HIS C 62 -1 O LEU C 61 N LEU C 54 SHEET 1 AA4 4 GLU D 30 ILE D 34 0 SHEET 2 AA4 4 TYR D 4 PHE D 9 1 N LEU D 6 O GLU D 30 SHEET 3 AA4 4 ILE D 53 VAL D 56 -1 O GLU D 55 N LYS D 5 SHEET 4 AA4 4 LEU D 59 HIS D 62 -1 O LEU D 59 N VAL D 56 LINK O HOH A 424 MG MG B 201 1555 1555 2.13 LINK O HOH A 452 MG MG B 201 1555 1555 2.13 LINK O HOH A 477 MG MG B 201 1555 1555 2.21 LINK MG MG B 201 O HOH B 313 1555 1555 2.09 LINK MG MG B 201 O HOH B 319 1555 1555 2.18 LINK MG MG B 201 O HOH B 362 1555 1555 2.07 LINK O HOH C 424 MG MG D 201 1555 1555 2.20 LINK O HOH C 434 MG MG D 201 1555 1555 2.06 LINK O HOH C 449 MG MG D 201 1555 1555 2.03 LINK MG MG D 201 O HOH D 335 1555 1555 2.11 LINK MG MG D 201 O HOH D 371 1555 1555 2.16 LINK MG MG D 201 O HOH D 372 1555 1555 2.10 CISPEP 1 ILE A 51 PRO A 52 0 5.98 CISPEP 2 ILE B 51 PRO B 52 0 8.27 CISPEP 3 ILE C 51 PRO C 52 0 8.53 CISPEP 4 ILE D 51 PRO D 52 0 8.93 SITE 1 AC1 10 TYR A 8 ARG A 14 TRP A 39 LYS A 50 SITE 2 AC1 10 ILE A 51 GLN A 63 SER A 64 HOH A 496 SITE 3 AC1 10 HOH A 510 ASP B 97 SITE 1 AC2 6 THR A 197 LYS A 198 HOH A 407 HOH A 522 SITE 2 AC2 6 GLN D 28 TYR D 29 SITE 1 AC3 7 GLN A 28 TYR A 29 HOH A 466 HOH A 489 SITE 2 AC3 7 THR D 197 HOH D 407 HOH D 434 SITE 1 AC4 6 HOH A 424 HOH A 452 HOH A 477 HOH B 313 SITE 2 AC4 6 HOH B 319 HOH B 362 SITE 1 AC5 12 ASP A 97 TYR B 8 ARG B 14 TRP B 39 SITE 2 AC5 12 LYS B 43 LYS B 50 ILE B 51 PRO B 52 SITE 3 AC5 12 GLN B 63 SER B 64 HOH B 331 HOH B 346 SITE 1 AC6 12 TYR C 8 ARG C 14 TRP C 39 LYS C 43 SITE 2 AC6 12 LYS C 50 ILE C 51 PRO C 52 GLN C 63 SITE 3 AC6 12 SER C 64 HOH C 427 HOH C 452 ASP D 97 SITE 1 AC7 6 HOH C 424 HOH C 434 HOH C 449 HOH D 335 SITE 2 AC7 6 HOH D 371 HOH D 372 SITE 1 AC8 11 ASP C 97 TYR D 8 ARG D 14 TRP D 39 SITE 2 AC8 11 GLY D 49 LYS D 50 ILE D 51 GLN D 63 SITE 3 AC8 11 SER D 64 HOH D 373 HOH D 394 CRYST1 47.429 48.200 88.969 95.82 90.08 89.97 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021084 -0.000011 0.000028 0.00000 SCALE2 0.000000 0.020747 0.002115 0.00000 SCALE3 0.000000 0.000000 0.011298 0.00000