HEADER DNA BINDING PROTEIN/DNA 08-DEC-17 5YYE TITLE DNA POLYMERASE IV - TERNARY COMPLEX 16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: F, A; COMPND 4 SYNONYM: POL IV,TRANSLESION SYNTHESIS POLYMERASE IV,TSL POLYMERASE COMPND 5 IV; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DTN2; COMPND 10 CHAIN: G, H, B, C; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: DINB, DINP, B0231, JW0221; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 11 ORGANISM_TAXID: 83333 KEYWDS DNA POLYMERASE, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.KOTTUR,D.T.NAIR REVDAT 2 22-NOV-23 5YYE 1 LINK REVDAT 1 05-SEP-18 5YYE 0 JRNL AUTH J.KOTTUR,D.T.NAIR JRNL TITL PYROPHOSPHATE HYDROLYSIS IS AN INTRINSIC AND CRITICAL STEP JRNL TITL 2 OF THE DNA SYNTHESIS REACTION JRNL REF NUCLEIC ACIDS RES. V. 46 5875 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 29850882 JRNL DOI 10.1093/NAR/GKY402 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.130 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 43574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 4472 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.2618 - 7.2212 0.97 2754 151 0.1274 0.1298 REMARK 3 2 7.2212 - 5.7328 0.95 2685 157 0.1783 0.2312 REMARK 3 3 5.7328 - 5.0084 0.98 2816 168 0.1656 0.2146 REMARK 3 4 5.0084 - 4.5506 0.98 2821 152 0.1585 0.2244 REMARK 3 5 4.5506 - 4.2245 0.98 2793 149 0.1549 0.2357 REMARK 3 6 4.2245 - 3.9755 0.95 2733 108 0.1658 0.2400 REMARK 3 7 3.9755 - 3.7764 0.97 2717 184 0.1780 0.2311 REMARK 3 8 3.7764 - 3.6120 0.98 2822 154 0.1882 0.2648 REMARK 3 9 3.6120 - 3.4730 0.98 2762 150 0.1960 0.2917 REMARK 3 10 3.4730 - 3.3531 0.97 2798 121 0.2057 0.2321 REMARK 3 11 3.3531 - 3.2483 0.98 2811 140 0.2016 0.2574 REMARK 3 12 3.2483 - 3.1555 0.96 2752 139 0.2293 0.2839 REMARK 3 13 3.1555 - 3.0724 0.95 2750 141 0.2360 0.2982 REMARK 3 14 3.0724 - 2.9974 0.94 2657 132 0.2421 0.3262 REMARK 3 15 2.9974 - 2.9293 0.96 2818 132 0.2415 0.3354 REMARK 3 16 2.9293 - 2.8669 0.96 2707 146 0.2596 0.3298 REMARK 3 17 2.8669 - 2.8096 0.98 2816 138 0.2487 0.3316 REMARK 3 18 2.8096 - 2.7566 0.97 2727 180 0.2589 0.2947 REMARK 3 19 2.7566 - 2.7073 0.98 2747 154 0.2709 0.3478 REMARK 3 20 2.7073 - 2.6615 0.97 2857 170 0.2884 0.3810 REMARK 3 21 2.6615 - 2.6185 0.96 2744 127 0.3063 0.3893 REMARK 3 22 2.6185 - 2.5782 0.93 2667 154 0.3080 0.3969 REMARK 3 23 2.5782 - 2.5403 0.92 2626 145 0.3042 0.3412 REMARK 3 24 2.5403 - 2.5045 0.96 2723 132 0.3063 0.3869 REMARK 3 25 2.5045 - 2.4707 0.95 2676 144 0.2981 0.3416 REMARK 3 26 2.4707 - 2.4386 0.96 2793 170 0.3028 0.2887 REMARK 3 27 2.4386 - 2.4081 0.97 2784 138 0.3168 0.3290 REMARK 3 28 2.4081 - 2.3791 0.96 2715 176 0.3216 0.4087 REMARK 3 29 2.3791 - 2.3514 0.97 2745 136 0.3253 0.4419 REMARK 3 30 2.3514 - 2.3250 0.98 2860 184 0.3390 0.3353 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 7031 REMARK 3 ANGLE : 1.105 9791 REMARK 3 CHIRALITY : 0.056 1092 REMARK 3 PLANARITY : 0.006 1030 REMARK 3 DIHEDRAL : 22.132 4072 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 0 THROUGH 10 OR RESID 76 REMARK 3 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9984 -14.7954 -70.3869 REMARK 3 T TENSOR REMARK 3 T11: 0.3170 T22: 0.3618 REMARK 3 T33: 0.8031 T12: -0.0306 REMARK 3 T13: 0.0390 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 2.1082 L22: 2.5068 REMARK 3 L33: 3.4812 L12: -0.0294 REMARK 3 L13: 1.6557 L23: -0.2749 REMARK 3 S TENSOR REMARK 3 S11: -0.1049 S12: 0.2677 S13: 0.0203 REMARK 3 S21: -0.2050 S22: -0.1183 S23: -0.9273 REMARK 3 S31: 0.0131 S32: 0.1549 S33: 0.2221 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3742 2.4265 -69.6552 REMARK 3 T TENSOR REMARK 3 T11: 0.4360 T22: 0.4443 REMARK 3 T33: 0.9429 T12: 0.0614 REMARK 3 T13: -0.2048 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 1.5880 L22: 2.5973 REMARK 3 L33: 1.7169 L12: -0.8581 REMARK 3 L13: 0.6157 L23: 0.4992 REMARK 3 S TENSOR REMARK 3 S11: -0.1616 S12: 0.2394 S13: 0.8832 REMARK 3 S21: -0.3719 S22: -0.3092 S23: 0.2561 REMARK 3 S31: -0.4870 S32: -0.1172 S33: 0.4307 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 165 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5059 -15.4654 -44.6368 REMARK 3 T TENSOR REMARK 3 T11: 0.4425 T22: 0.3689 REMARK 3 T33: 0.8293 T12: 0.0312 REMARK 3 T13: -0.1936 T23: -0.0772 REMARK 3 L TENSOR REMARK 3 L11: 2.3388 L22: 3.4117 REMARK 3 L33: 2.7355 L12: -1.7264 REMARK 3 L13: -0.1598 L23: -0.4128 REMARK 3 S TENSOR REMARK 3 S11: -0.2681 S12: -0.2913 S13: 0.0248 REMARK 3 S21: 0.6046 S22: -0.0466 S23: -0.2185 REMARK 3 S31: -0.2307 S32: -0.0261 S33: 0.3011 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 241 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.4076 -19.8414 -64.3560 REMARK 3 T TENSOR REMARK 3 T11: 0.2914 T22: 0.7628 REMARK 3 T33: 0.5531 T12: -0.1118 REMARK 3 T13: 0.0140 T23: -0.2432 REMARK 3 L TENSOR REMARK 3 L11: 4.6288 L22: 3.3789 REMARK 3 L33: 2.1958 L12: -0.6539 REMARK 3 L13: 0.2122 L23: -0.6247 REMARK 3 S TENSOR REMARK 3 S11: -0.3476 S12: -0.4303 S13: 0.4917 REMARK 3 S21: -0.0598 S22: 0.2346 S23: 0.2234 REMARK 3 S31: 0.2643 S32: -0.8432 S33: 0.0727 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 10 OR RESID 76 REMARK 3 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0172 -9.1604 3.4294 REMARK 3 T TENSOR REMARK 3 T11: 0.7080 T22: 0.5482 REMARK 3 T33: 0.6127 T12: 0.1290 REMARK 3 T13: -0.2027 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 3.9025 L22: 2.7897 REMARK 3 L33: 2.7936 L12: 0.0244 REMARK 3 L13: 0.0788 L23: 0.6211 REMARK 3 S TENSOR REMARK 3 S11: 0.0455 S12: -0.1121 S13: -0.3714 REMARK 3 S21: 0.6297 S22: 0.1120 S23: -0.5278 REMARK 3 S31: 0.2476 S32: 0.5192 S33: -0.1405 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7126 7.7163 -14.4041 REMARK 3 T TENSOR REMARK 3 T11: 0.6547 T22: 0.5032 REMARK 3 T33: 0.6462 T12: -0.0818 REMARK 3 T13: -0.0200 T23: -0.0817 REMARK 3 L TENSOR REMARK 3 L11: 3.9625 L22: 4.1513 REMARK 3 L33: 4.9194 L12: -0.6199 REMARK 3 L13: -0.8432 L23: -0.2298 REMARK 3 S TENSOR REMARK 3 S11: 0.3458 S12: -0.2881 S13: 0.4549 REMARK 3 S21: 0.2798 S22: -0.0462 S23: -0.5899 REMARK 3 S31: -0.7506 S32: 0.6553 S33: -0.3269 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.7596 -9.9954 -4.5267 REMARK 3 T TENSOR REMARK 3 T11: 0.6473 T22: 0.4834 REMARK 3 T33: 0.4442 T12: 0.0018 REMARK 3 T13: 0.0248 T23: 0.0336 REMARK 3 L TENSOR REMARK 3 L11: 3.1390 L22: 4.7376 REMARK 3 L33: 3.1083 L12: 0.5128 REMARK 3 L13: -0.0954 L23: -0.5275 REMARK 3 S TENSOR REMARK 3 S11: 0.0741 S12: 0.0020 S13: -0.0430 REMARK 3 S21: -0.0600 S22: 0.0058 S23: 0.4486 REMARK 3 S31: 0.2571 S32: -0.4531 S33: -0.1121 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 241 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6299 -15.8504 -32.4124 REMARK 3 T TENSOR REMARK 3 T11: 0.4850 T22: 0.5917 REMARK 3 T33: 0.5315 T12: 0.1739 REMARK 3 T13: -0.0322 T23: -0.0742 REMARK 3 L TENSOR REMARK 3 L11: 2.4694 L22: 5.2787 REMARK 3 L33: 4.8537 L12: -0.6778 REMARK 3 L13: -0.3858 L23: -0.9822 REMARK 3 S TENSOR REMARK 3 S11: 0.0125 S12: 0.1689 S13: -0.3103 REMARK 3 S21: 0.1485 S22: -0.1373 S23: -0.2054 REMARK 3 S31: 0.4644 S32: 0.5426 S33: 0.1466 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 860 THROUGH 873 ) OR CHAIN 'G' REMARK 3 AND (RESID 838 THROUGH 854) OR CHAIN 'F' AND (RESID REMARK 3 900 THROUGH 902) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3438 -25.1636 -52.8414 REMARK 3 T TENSOR REMARK 3 T11: 0.3762 T22: 0.6018 REMARK 3 T33: 0.7178 T12: -0.0086 REMARK 3 T13: 0.0869 T23: -0.1027 REMARK 3 L TENSOR REMARK 3 L11: 2.8656 L22: 2.7439 REMARK 3 L33: 1.1987 L12: 0.9670 REMARK 3 L13: 0.5236 L23: -1.7225 REMARK 3 S TENSOR REMARK 3 S11: -0.1843 S12: -0.5292 S13: -0.2862 REMARK 3 S21: -0.0932 S22: -0.1182 S23: -0.1424 REMARK 3 S31: 0.2505 S32: -0.3620 S33: 0.2503 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 837 THROUGH 854 ) OR CHAIN 'C' REMARK 3 AND (RESID 857 THROUGH 873) OR CHAIN 'A' AND (RESID REMARK 3 900 THROUGH 902) REMARK 3 ORIGIN FOR THE GROUP (A): -42.4829 -20.9400 -23.9285 REMARK 3 T TENSOR REMARK 3 T11: 0.7396 T22: 0.6123 REMARK 3 T33: 0.6768 T12: -0.0209 REMARK 3 T13: -0.0999 T23: -0.0660 REMARK 3 L TENSOR REMARK 3 L11: 1.3310 L22: 5.0170 REMARK 3 L33: 0.7368 L12: 2.0050 REMARK 3 L13: 0.8457 L23: 1.9535 REMARK 3 S TENSOR REMARK 3 S11: 0.1771 S12: -0.1673 S13: -0.2112 REMARK 3 S21: 0.0036 S22: -0.2603 S23: -0.1489 REMARK 3 S31: 0.1382 S32: -0.3915 S33: 0.0311 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SF FILE CONTAINS FRIEDEL PAIRS UNDER REMARK 3 I/F_MINUS AND I/F_PLUS COLUMNS. REMARK 4 REMARK 4 5YYE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300006116. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97264 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46597 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.325 REMARK 200 RESOLUTION RANGE LOW (A) : 86.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IR1 REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS REMARK 200 COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% MPD , PH 5.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.47500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN F 342 REMARK 465 MET F 343 REMARK 465 GLU F 344 REMARK 465 ARG F 345 REMARK 465 GLN F 346 REMARK 465 LEU F 347 REMARK 465 VAL F 348 REMARK 465 LEU F 349 REMARK 465 GLY F 350 REMARK 465 LEU F 351 REMARK 465 GLN A 342 REMARK 465 MET A 343 REMARK 465 GLU A 344 REMARK 465 ARG A 345 REMARK 465 GLN A 346 REMARK 465 LEU A 347 REMARK 465 VAL A 348 REMARK 465 LEU A 349 REMARK 465 GLY A 350 REMARK 465 LEU A 351 REMARK 465 DT G 837 REMARK 465 DT H 856 REMARK 465 DC H 857 REMARK 465 DT H 858 REMARK 465 DA H 859 REMARK 465 DT C 856 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS F 64 CG CD CE NZ REMARK 470 LYS F 205 CG CD CE NZ REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 LYS A 205 CG CD CE NZ REMARK 470 DC G 838 P REMARK 470 DG H 860 P OP1 OP2 REMARK 470 DC C 857 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL F 234 O HOH F 1001 1.91 REMARK 500 OP1 DT H 863 O HOH H 901 1.98 REMARK 500 OP2 DG C 869 O HOH C 901 2.02 REMARK 500 OG SER F 42 O HOH F 1002 2.08 REMARK 500 O HOH H 906 O HOH H 909 2.11 REMARK 500 OG1 THR A 70 O HOH A 1001 2.11 REMARK 500 O ARG A 232 O HOH A 1002 2.14 REMARK 500 OP2 DG H 869 O HOH H 902 2.16 REMARK 500 O HOH F 1041 O HOH F 1042 2.17 REMARK 500 OE1 GLU F 258 O HOH F 1003 2.17 REMARK 500 NH1 ARG F 220 O HOH F 1004 2.18 REMARK 500 OH TYR F 93 OE2 GLU F 125 2.18 REMARK 500 NE2 GLN F 227 O HOH F 1005 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 118 OP1 DG C 862 2455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG H 862 O3' DG H 862 C3' -0.038 REMARK 500 DG H 868 O3' DG H 868 C3' -0.042 REMARK 500 DA H 870 O3' DA H 870 C3' -0.041 REMARK 500 DC C 871 O3' DC C 871 C3' -0.040 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU F 222 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 DA G 848 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG H 869 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG B 850 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC C 857 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS F 11 53.81 37.47 REMARK 500 SER F 101 -173.93 -174.73 REMARK 500 THR F 129 -61.89 102.56 REMARK 500 PHE F 215 -7.22 -140.65 REMARK 500 ASN F 235 -73.94 -76.68 REMARK 500 SER F 236 -6.75 86.02 REMARK 500 PHE F 295 -6.25 72.02 REMARK 500 LEU F 307 121.04 -39.37 REMARK 500 ARG F 324 -28.62 -162.17 REMARK 500 CYS A 11 58.79 39.21 REMARK 500 CYS A 66 84.73 -150.46 REMARK 500 SER A 101 -167.43 -169.57 REMARK 500 THR A 129 -37.83 98.13 REMARK 500 GLU A 133 -54.21 69.28 REMARK 500 ASN A 235 -97.35 -86.35 REMARK 500 SER A 236 5.30 94.63 REMARK 500 LEU A 338 -80.40 -74.73 REMARK 500 LEU A 339 167.90 160.36 REMARK 500 ASP A 340 -91.52 -104.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 MET F 9 O 80.5 REMARK 620 3 ASP F 103 OD2 91.5 94.5 REMARK 620 4 TTW F 900 O2A 90.8 171.3 85.9 REMARK 620 5 TTW F 900 O2B 172.3 97.6 96.1 91.0 REMARK 620 6 TTW F 900 O2G 85.4 92.6 171.7 86.5 87.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD2 REMARK 620 2 ASP F 103 OD1 113.5 REMARK 620 3 GLU F 104 OE1 69.6 114.6 REMARK 620 4 TTW F 900 O2A 87.0 93.9 148.3 REMARK 620 5 HOH F1024 O 61.1 168.4 74.2 75.9 REMARK 620 6 DC H 873 O3' 163.4 82.9 101.7 95.0 103.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 MET A 9 O 82.8 REMARK 620 3 ASP A 103 OD2 93.6 86.4 REMARK 620 4 TTW A 900 O2A 106.4 170.7 93.6 REMARK 620 5 TTW A 900 O2B 165.7 86.3 94.9 84.5 REMARK 620 6 TTW A 900 O2G 87.4 97.1 176.4 82.7 84.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ASP A 8 OD2 49.9 REMARK 620 3 ASP A 103 OD1 109.8 143.2 REMARK 620 4 ASP A 103 OD2 66.6 113.2 45.2 REMARK 620 5 GLU A 104 OE2 129.4 79.5 112.8 156.5 REMARK 620 6 TTW A 900 O2A 77.7 108.6 92.6 71.2 125.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TTW F 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TTW A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 902 DBREF 5YYE F 2 351 UNP Q47155 DPO4_ECOLI 2 351 DBREF 5YYE A 2 351 UNP Q47155 DPO4_ECOLI 2 351 DBREF 5YYE G 837 854 PDB 5YYE 5YYE 837 854 DBREF 5YYE H 856 873 PDB 5YYE 5YYE 856 873 DBREF 5YYE B 837 854 PDB 5YYE 5YYE 837 854 DBREF 5YYE C 856 873 PDB 5YYE 5YYE 856 873 SEQADV 5YYE GLY F 0 UNP Q47155 EXPRESSION TAG SEQADV 5YYE SER F 1 UNP Q47155 EXPRESSION TAG SEQADV 5YYE GLY A 0 UNP Q47155 EXPRESSION TAG SEQADV 5YYE SER A 1 UNP Q47155 EXPRESSION TAG SEQRES 1 F 352 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 F 352 PHE ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 F 352 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 F 352 GLY VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 F 352 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 F 352 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 F 352 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 F 352 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 F 352 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 F 352 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 F 352 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 F 352 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 F 352 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 F 352 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 F 352 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 F 352 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 F 352 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 F 352 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 F 352 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 F 352 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 F 352 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 F 352 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 F 352 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 F 352 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 F 352 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 F 352 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 F 352 LEU LEU ASP PRO GLN MET GLU ARG GLN LEU VAL LEU GLY SEQRES 28 F 352 LEU SEQRES 1 A 352 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 A 352 PHE ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 A 352 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 A 352 GLY VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 A 352 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 A 352 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 A 352 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 A 352 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 A 352 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 A 352 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 A 352 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 A 352 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 A 352 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 A 352 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 A 352 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 A 352 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 A 352 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 A 352 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 A 352 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 A 352 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 A 352 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 A 352 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 A 352 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 A 352 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 A 352 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 A 352 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 A 352 LEU LEU ASP PRO GLN MET GLU ARG GLN LEU VAL LEU GLY SEQRES 28 A 352 LEU SEQRES 1 G 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 G 18 DG DA DC DC DC SEQRES 1 H 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 H 18 DG DA DC DC DC SEQRES 1 B 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 B 18 DG DA DC DC DC SEQRES 1 C 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 C 18 DG DA DC DC DC HET TTW F 900 29 HET MG F 901 1 HET MG F 902 1 HET TTW A 900 29 HET MG A 901 1 HET MG A 902 1 HETNAM TTW 5'-O-[HYDROXY{[HYDROXY(PHOSPHONOAMINO) HETNAM 2 TTW PHOSPHORYL]OXY}PHOSPHORYL]THYMIDINE HETNAM MG MAGNESIUM ION FORMUL 7 TTW 2(C10 H18 N3 O13 P3) FORMUL 8 MG 4(MG 2+) FORMUL 13 HOH *97(H2 O) HELIX 1 AA1 CYS F 11 ASN F 21 1 11 HELIX 2 AA2 PRO F 22 ARG F 25 5 4 HELIX 3 AA3 ASN F 45 LYS F 50 1 6 HELIX 4 AA4 PRO F 58 CYS F 66 1 9 HELIX 5 AA5 ARG F 75 ARG F 92 1 18 HELIX 6 AA6 VAL F 113 GLY F 117 5 5 HELIX 7 AA7 SER F 118 GLN F 135 1 18 HELIX 8 AA8 VAL F 145 ASN F 156 1 12 HELIX 9 AA9 GLU F 168 THR F 175 1 8 HELIX 10 AB1 PRO F 177 ILE F 181 5 5 HELIX 11 AB2 GLY F 185 MET F 195 1 11 HELIX 12 AB3 THR F 199 LYS F 205 1 7 HELIX 13 AB4 ASP F 207 GLY F 216 1 10 HELIX 14 AB5 GLY F 216 SER F 226 1 11 HELIX 15 AB6 HIS F 255 LYS F 278 1 24 HELIX 16 AB7 ASN F 308 ARG F 323 1 16 HELIX 17 AB8 CYS A 11 ASP A 20 1 10 HELIX 18 AB9 ASN A 21 ARG A 25 5 5 HELIX 19 AC1 SER A 34 ARG A 38 5 5 HELIX 20 AC2 ASN A 45 PHE A 51 1 7 HELIX 21 AC3 PRO A 58 CYS A 66 1 9 HELIX 22 AC4 ARG A 75 SER A 91 1 17 HELIX 23 AC5 HIS A 114 GLY A 117 5 4 HELIX 24 AC6 SER A 118 GLN A 135 1 18 HELIX 25 AC7 VAL A 145 ASP A 154 1 10 HELIX 26 AC8 GLU A 168 THR A 175 1 8 HELIX 27 AC9 PRO A 177 ILE A 181 5 5 HELIX 28 AD1 GLY A 185 MET A 195 1 11 HELIX 29 AD2 THR A 199 LYS A 205 1 7 HELIX 30 AD3 ASP A 207 GLY A 216 1 10 HELIX 31 AD4 GLY A 216 SER A 226 1 11 HELIX 32 AD5 HIS A 255 LYS A 278 1 24 HELIX 33 AD6 ASN A 308 ARG A 324 1 17 SHEET 1 AA1 5 ILE F 97 SER F 101 0 SHEET 2 AA1 5 GLU F 104 ASP F 108 -1 O TYR F 106 N GLU F 98 SHEET 3 AA1 5 ILE F 4 MET F 9 -1 N ILE F 5 O LEU F 107 SHEET 4 AA1 5 ALA F 138 ALA F 143 -1 O SER F 139 N ASP F 8 SHEET 5 AA1 5 GLN F 161 VAL F 163 1 O PHE F 162 N VAL F 142 SHEET 1 AA2 3 ILE F 41 ALA F 44 0 SHEET 2 AA2 3 ILE F 29 GLY F 32 -1 N ILE F 31 O SER F 42 SHEET 3 AA2 3 THR F 70 LEU F 72 1 O LEU F 72 N ALA F 30 SHEET 1 AA3 4 SER F 242 ILE F 253 0 SHEET 2 AA3 4 VAL F 329 THR F 337 -1 O LEU F 334 N VAL F 245 SHEET 3 AA3 4 ARG F 285 PHE F 292 -1 N ARG F 285 O THR F 337 SHEET 4 AA3 4 GLN F 297 VAL F 303 -1 O GLN F 300 N VAL F 288 SHEET 1 AA4 5 ILE A 97 PRO A 99 0 SHEET 2 AA4 5 GLU A 104 ASP A 108 -1 O TYR A 106 N GLU A 98 SHEET 3 AA4 5 ILE A 4 MET A 9 -1 N ILE A 5 O LEU A 107 SHEET 4 AA4 5 ALA A 138 ALA A 143 -1 O SER A 139 N ASP A 8 SHEET 5 AA4 5 GLN A 161 VAL A 163 1 O PHE A 162 N VAL A 142 SHEET 1 AA5 3 ILE A 41 ALA A 44 0 SHEET 2 AA5 3 ILE A 29 GLY A 32 -1 N ILE A 31 O SER A 42 SHEET 3 AA5 3 THR A 70 LEU A 72 1 O LEU A 72 N ALA A 30 SHEET 1 AA6 4 SER A 242 ILE A 253 0 SHEET 2 AA6 4 VAL A 329 THR A 337 -1 O LEU A 334 N VAL A 245 SHEET 3 AA6 4 ARG A 285 PHE A 292 -1 N LYS A 291 O ARG A 330 SHEET 4 AA6 4 GLN A 297 VAL A 303 -1 O THR A 298 N LEU A 290 LINK OD1 ASP F 8 MG MG F 901 1555 1555 2.22 LINK OD2 ASP F 8 MG MG F 902 1555 1555 2.88 LINK O MET F 9 MG MG F 901 1555 1555 2.16 LINK OD2 ASP F 103 MG MG F 901 1555 1555 2.17 LINK OD1 ASP F 103 MG MG F 902 1555 1555 2.26 LINK OE1 GLU F 104 MG MG F 902 1555 1555 1.91 LINK O2A TTW F 900 MG MG F 901 1555 1555 2.11 LINK O2B TTW F 900 MG MG F 901 1555 1555 2.10 LINK O2G TTW F 900 MG MG F 901 1555 1555 2.24 LINK O2A TTW F 900 MG MG F 902 1555 1555 2.35 LINK MG MG F 902 O HOH F1024 1555 1555 2.68 LINK MG MG F 902 O3' DC H 873 1555 1555 2.32 LINK OD1 ASP A 8 MG MG A 901 1555 1555 2.00 LINK OD1 ASP A 8 MG MG A 902 1555 1555 2.74 LINK OD2 ASP A 8 MG MG A 902 1555 1555 2.41 LINK O MET A 9 MG MG A 901 1555 1555 2.20 LINK OD2 ASP A 103 MG MG A 901 1555 1555 2.31 LINK OD1 ASP A 103 MG MG A 902 1555 1555 2.67 LINK OD2 ASP A 103 MG MG A 902 1555 1555 2.98 LINK OE2 GLU A 104 MG MG A 902 1555 1555 1.92 LINK O2A TTW A 900 MG MG A 901 1555 1555 1.90 LINK O2B TTW A 900 MG MG A 901 1555 1555 2.30 LINK O2G TTW A 900 MG MG A 901 1555 1555 2.19 LINK O2A TTW A 900 MG MG A 902 1555 1555 2.20 CISPEP 1 LYS F 157 PRO F 158 0 -2.59 CISPEP 2 LYS A 157 PRO A 158 0 -2.15 SITE 1 AC1 18 ASP F 8 MET F 9 ASP F 10 CYS F 11 SITE 2 AC1 18 PHE F 12 PHE F 13 SER F 42 THR F 43 SITE 3 AC1 18 ASP F 103 LYS F 157 MG F 901 MG F 902 SITE 4 AC1 18 HOH F1002 HOH F1015 HOH F1016 HOH F1024 SITE 5 AC1 18 DA G 840 DC H 873 SITE 1 AC2 4 ASP F 8 MET F 9 ASP F 103 TTW F 900 SITE 1 AC3 6 ASP F 8 ASP F 103 GLU F 104 TTW F 900 SITE 2 AC3 6 HOH F1024 DC H 873 SITE 1 AC4 17 ASP A 8 MET A 9 ASP A 10 CYS A 11 SITE 2 AC4 17 PHE A 12 PHE A 13 SER A 42 THR A 43 SITE 3 AC4 17 ARG A 49 SER A 55 ASP A 103 GLU A 104 SITE 4 AC4 17 LYS A 157 MG A 901 MG A 902 DA B 840 SITE 5 AC4 17 DC C 873 SITE 1 AC5 5 ASP A 8 MET A 9 ASP A 103 TTW A 900 SITE 2 AC5 5 MG A 902 SITE 1 AC6 6 ASP A 8 ASP A 103 GLU A 104 TTW A 900 SITE 2 AC6 6 MG A 901 DC C 873 CRYST1 86.300 56.950 110.710 90.00 94.79 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011587 0.000000 0.000971 0.00000 SCALE2 0.000000 0.017559 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009064 0.00000