data_5YZZ # _entry.id 5YZZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YZZ pdb_00005yzz 10.2210/pdb5yzz/pdb WWPDB D_1300006198 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5YZZ _pdbx_database_status.recvd_initial_deposition_date 2017-12-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wu, B.X.' 1 ? 'Zhang, M.M.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biochem. Biophys. Res. Commun.' _citation.journal_id_ASTM BBRCA9 _citation.journal_id_CSD 0146 _citation.journal_id_ISSN 1090-2104 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2018.05.002 _citation.pdbx_database_id_PubMed 29733847 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, B.X.' 1 ? primary 'Zhang, M.M.' 2 ? primary 'Su, S.C.' 3 ? primary 'Liu, H.H.' 4 ? primary 'Gan, J.H.' 5 ? primary 'Ma, J.B.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5YZZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 86.896 _cell.length_a_esd ? _cell.length_b 86.896 _cell.length_b_esd ? _cell.length_c 148.237 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YZZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*T)-3') ; 3981.608 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*A)-3') ; 3959.612 1 ? ? ? ? 3 polymer man 'B3 domain-containing transcription repressor VAL1' 14194.220 1 ? ? 'B3 domain, DNA binding domain' ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE 2,Protein VP1/ABI3-LIKE 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DT)(DT)(DC)(DT)(DG)(DC)(DA)(DT)(DG)(DG)(DA)(DT)' ATTCTGCATGGAT A ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DT)(DC)(DC)(DA)(DT)(DG)(DC)(DA)(DG)(DA)(DA)' TATCCATGCAGAA B ? 3 'polypeptide(L)' no no ;PKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNN NSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGD ; ;PKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNN NSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGD ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DT n 1 3 DT n 1 4 DC n 1 5 DT n 1 6 DG n 1 7 DC n 1 8 DA n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DA n 1 13 DT n 2 1 DT n 2 2 DA n 2 3 DT n 2 4 DC n 2 5 DC n 2 6 DA n 2 7 DT n 2 8 DG n 2 9 DC n 2 10 DA n 2 11 DG n 2 12 DA n 2 13 DA n 3 1 PRO n 3 2 LYS n 3 3 TYR n 3 4 THR n 3 5 ASP n 3 6 LYS n 3 7 GLU n 3 8 VAL n 3 9 GLN n 3 10 GLN n 3 11 ILE n 3 12 SER n 3 13 GLY n 3 14 ASN n 3 15 LEU n 3 16 ASN n 3 17 LEU n 3 18 ASN n 3 19 ILE n 3 20 VAL n 3 21 PRO n 3 22 LEU n 3 23 PHE n 3 24 GLU n 3 25 LYS n 3 26 THR n 3 27 LEU n 3 28 SER n 3 29 ALA n 3 30 SER n 3 31 ASP n 3 32 ALA n 3 33 GLY n 3 34 ARG n 3 35 ILE n 3 36 GLY n 3 37 ARG n 3 38 LEU n 3 39 VAL n 3 40 LEU n 3 41 PRO n 3 42 LYS n 3 43 ALA n 3 44 CYS n 3 45 ALA n 3 46 GLU n 3 47 ALA n 3 48 TYR n 3 49 PHE n 3 50 PRO n 3 51 PRO n 3 52 ILE n 3 53 SER n 3 54 GLN n 3 55 SER n 3 56 GLU n 3 57 GLY n 3 58 ILE n 3 59 PRO n 3 60 LEU n 3 61 LYS n 3 62 ILE n 3 63 GLN n 3 64 ASP n 3 65 VAL n 3 66 ARG n 3 67 GLY n 3 68 ARG n 3 69 GLU n 3 70 TRP n 3 71 THR n 3 72 PHE n 3 73 GLN n 3 74 PHE n 3 75 ARG n 3 76 TYR n 3 77 TRP n 3 78 PRO n 3 79 ASN n 3 80 ASN n 3 81 ASN n 3 82 SER n 3 83 ARG n 3 84 MET n 3 85 TYR n 3 86 VAL n 3 87 LEU n 3 88 GLU n 3 89 GLY n 3 90 VAL n 3 91 THR n 3 92 PRO n 3 93 CYS n 3 94 ILE n 3 95 GLN n 3 96 SER n 3 97 MET n 3 98 MET n 3 99 LEU n 3 100 GLN n 3 101 ALA n 3 102 GLY n 3 103 ASP n 3 104 THR n 3 105 VAL n 3 106 THR n 3 107 PHE n 3 108 SER n 3 109 ARG n 3 110 VAL n 3 111 ASP n 3 112 PRO n 3 113 GLY n 3 114 GLY n 3 115 LYS n 3 116 LEU n 3 117 ILE n 3 118 MET n 3 119 GLY n 3 120 SER n 3 121 ARG n 3 122 LYS n 3 123 ALA n 3 124 ALA n 3 125 ASN n 3 126 ALA n 3 127 GLY n 3 128 ASP n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 128 _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'VAL1, HSI2, At2g30470, T6B20.17' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 13 'synthetic construct' ? 32630 ? 2 1 sample 1 13 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5YZZ 5YZZ ? 1 ? 1 2 PDB 5YZZ 5YZZ ? 2 ? 1 3 UNP VAL1_ARATH Q8W4L5 ? 3 ;PKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNN NSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGD ; 273 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5YZZ A 1 ? 13 ? 5YZZ 1 ? 13 ? 1 13 2 2 5YZZ B 1 ? 13 ? 5YZZ 1 ? 13 ? 1 13 3 3 5YZZ C 1 ? 128 ? Q8W4L5 273 ? 400 ? 273 400 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YZZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.08 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% (w/v) PEG 5000 MME, 0.1M Tris base/Hydrochloric acid pH 8.0, 0.2M Lithium sulfate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-11-30 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97853 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL18U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97853 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL18U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5YZZ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.58 _reflns.d_resolution_low 74.97 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9191 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.9 _reflns.pdbx_Rmerge_I_obs 0.077 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.58 _reflns_shell.d_res_low 2.67 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.98 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.98 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 1.97 _refine.B_iso_max ? _refine.B_iso_mean 44.338 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.926 _refine.correlation_coeff_Fo_to_Fc_free 0.893 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5YZZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.58 _refine.ls_d_res_low 30.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7414 _refine.ls_number_reflns_R_free 415 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 84.56 _refine.ls_percent_reflns_R_free 5.3 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.22757 _refine.ls_R_factor_R_free 0.25522 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.22598 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5YZY _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.547 _refine.pdbx_overall_ESU_R_Free 0.308 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 13.293 _refine.overall_SU_ML 0.247 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 866 _refine_hist.pdbx_number_atoms_nucleic_acid 527 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1393 _refine_hist.d_res_high 2.58 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 0.016 1475 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1135 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.895 1.626 2104 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.326 3.000 2647 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 9.497 5.000 110 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.024 23.158 38 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 19.037 15.000 152 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 22.200 15.000 8 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.099 0.200 209 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.021 1280 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 305 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 3.811 4.473 443 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.783 4.464 442 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 6.491 6.667 552 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 6.496 6.681 553 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.972 4.469 1032 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.953 4.460 1030 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 6.459 6.629 1552 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 8.865 43.304 1744 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 8.865 43.279 1744 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.585 _refine_ls_shell.d_res_low 2.652 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 11 _refine_ls_shell.number_reflns_R_work 182 _refine_ls_shell.percent_reflns_obs 28.55 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.499 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.494 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5YZZ _struct.title 'AtVAL1 B3 domain in complex with 13bp-DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YZZ _struct_keywords.text 'transcriptional factor, Val1, B3 domain, DNA complex, FLC, plant, TRANSCRIPTION, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER C 28 ? GLY C 33 ? SER C 300 GLY C 305 1 ? 6 HELX_P HELX_P2 AA2 PRO C 41 ? PHE C 49 ? PRO C 313 PHE C 321 1 ? 9 HELX_P HELX_P3 AA3 VAL C 90 ? MET C 97 ? VAL C 362 MET C 369 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 13 N1 ? ? A DT 2 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 13 N6 ? ? A DT 2 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 12 N1 ? ? A DT 3 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 12 N6 ? ? A DT 3 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 11 N1 ? ? A DC 4 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 11 O6 ? ? A DC 4 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 11 N2 ? ? A DC 4 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 10 N1 ? ? A DT 5 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 10 N6 ? ? A DT 5 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 6 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 6 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 6 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 7 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 7 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 7 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 8 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 8 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 9 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 9 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 10 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 10 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 10 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 11 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 11 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 11 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 12 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 12 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 13 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 13 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 111 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 383 _struct_mon_prot_cis.auth_asym_id C _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 112 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 384 _struct_mon_prot_cis.pdbx_auth_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -12.45 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN C 18 ? THR C 26 ? ASN C 290 THR C 298 AA1 2 THR C 104 ? ASP C 111 ? THR C 376 ASP C 383 AA1 3 LYS C 115 ? ARG C 121 ? LYS C 387 ARG C 393 AA1 4 ILE C 58 ? ASP C 64 ? ILE C 330 ASP C 336 AA1 5 GLU C 69 ? ASN C 79 ? GLU C 341 ASN C 351 AA1 6 SER C 82 ? GLU C 88 ? SER C 354 GLU C 360 AA1 7 ARG C 37 ? LEU C 40 ? ARG C 309 LEU C 312 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL C 20 ? N VAL C 292 O ARG C 109 ? O ARG C 381 AA1 2 3 N THR C 104 ? N THR C 376 O ARG C 121 ? O ARG C 393 AA1 3 4 O LEU C 116 ? O LEU C 388 N GLN C 63 ? N GLN C 335 AA1 4 5 N ILE C 62 ? N ILE C 334 O TRP C 70 ? O TRP C 342 AA1 5 6 N ASN C 79 ? N ASN C 351 O SER C 82 ? O SER C 354 AA1 6 7 O LEU C 87 ? O LEU C 359 N LEU C 38 ? N LEU C 310 # _atom_sites.entry_id 5YZZ _atom_sites.fract_transf_matrix[1][1] 0.011508 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011508 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006746 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DC 7 7 7 DC DC A . n A 1 8 DA 8 8 8 DA DA A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DA 12 12 12 DA DA A . n A 1 13 DT 13 13 13 DT DT A . n B 2 1 DT 1 1 1 DT DT B . n B 2 2 DA 2 2 2 DA DA B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DC 4 4 4 DC DC B . n B 2 5 DC 5 5 5 DC DC B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DC 9 9 9 DC DC B . n B 2 10 DA 10 10 10 DA DA B . n B 2 11 DG 11 11 11 DG DG B . n B 2 12 DA 12 12 12 DA DA B . n B 2 13 DA 13 13 13 DA DA B . n C 3 1 PRO 1 273 ? ? ? C . n C 3 2 LYS 2 274 ? ? ? C . n C 3 3 TYR 3 275 ? ? ? C . n C 3 4 THR 4 276 ? ? ? C . n C 3 5 ASP 5 277 ? ? ? C . n C 3 6 LYS 6 278 ? ? ? C . n C 3 7 GLU 7 279 ? ? ? C . n C 3 8 VAL 8 280 ? ? ? C . n C 3 9 GLN 9 281 ? ? ? C . n C 3 10 GLN 10 282 ? ? ? C . n C 3 11 ILE 11 283 ? ? ? C . n C 3 12 SER 12 284 ? ? ? C . n C 3 13 GLY 13 285 ? ? ? C . n C 3 14 ASN 14 286 ? ? ? C . n C 3 15 LEU 15 287 287 LEU LEU C . n C 3 16 ASN 16 288 288 ASN ASN C . n C 3 17 LEU 17 289 289 LEU LEU C . n C 3 18 ASN 18 290 290 ASN ASN C . n C 3 19 ILE 19 291 291 ILE ILE C . n C 3 20 VAL 20 292 292 VAL VAL C . n C 3 21 PRO 21 293 293 PRO PRO C . n C 3 22 LEU 22 294 294 LEU LEU C . n C 3 23 PHE 23 295 295 PHE PHE C . n C 3 24 GLU 24 296 296 GLU GLU C . n C 3 25 LYS 25 297 297 LYS LYS C . n C 3 26 THR 26 298 298 THR THR C . n C 3 27 LEU 27 299 299 LEU LEU C . n C 3 28 SER 28 300 300 SER SER C . n C 3 29 ALA 29 301 301 ALA ALA C . n C 3 30 SER 30 302 302 SER SER C . n C 3 31 ASP 31 303 303 ASP ASP C . n C 3 32 ALA 32 304 304 ALA ALA C . n C 3 33 GLY 33 305 305 GLY GLY C . n C 3 34 ARG 34 306 306 ARG ARG C . n C 3 35 ILE 35 307 307 ILE ILE C . n C 3 36 GLY 36 308 308 GLY GLY C . n C 3 37 ARG 37 309 309 ARG ARG C . n C 3 38 LEU 38 310 310 LEU LEU C . n C 3 39 VAL 39 311 311 VAL VAL C . n C 3 40 LEU 40 312 312 LEU LEU C . n C 3 41 PRO 41 313 313 PRO PRO C . n C 3 42 LYS 42 314 314 LYS LYS C . n C 3 43 ALA 43 315 315 ALA ALA C . n C 3 44 CYS 44 316 316 CYS CYS C . n C 3 45 ALA 45 317 317 ALA ALA C . n C 3 46 GLU 46 318 318 GLU GLU C . n C 3 47 ALA 47 319 319 ALA ALA C . n C 3 48 TYR 48 320 320 TYR TYR C . n C 3 49 PHE 49 321 321 PHE PHE C . n C 3 50 PRO 50 322 322 PRO PRO C . n C 3 51 PRO 51 323 323 PRO PRO C . n C 3 52 ILE 52 324 324 ILE ILE C . n C 3 53 SER 53 325 325 SER SER C . n C 3 54 GLN 54 326 326 GLN GLN C . n C 3 55 SER 55 327 327 SER SER C . n C 3 56 GLU 56 328 328 GLU GLU C . n C 3 57 GLY 57 329 329 GLY GLY C . n C 3 58 ILE 58 330 330 ILE ILE C . n C 3 59 PRO 59 331 331 PRO PRO C . n C 3 60 LEU 60 332 332 LEU LEU C . n C 3 61 LYS 61 333 333 LYS LYS C . n C 3 62 ILE 62 334 334 ILE ILE C . n C 3 63 GLN 63 335 335 GLN GLN C . n C 3 64 ASP 64 336 336 ASP ASP C . n C 3 65 VAL 65 337 337 VAL VAL C . n C 3 66 ARG 66 338 338 ARG ARG C . n C 3 67 GLY 67 339 339 GLY GLY C . n C 3 68 ARG 68 340 340 ARG ARG C . n C 3 69 GLU 69 341 341 GLU GLU C . n C 3 70 TRP 70 342 342 TRP TRP C . n C 3 71 THR 71 343 343 THR THR C . n C 3 72 PHE 72 344 344 PHE PHE C . n C 3 73 GLN 73 345 345 GLN GLN C . n C 3 74 PHE 74 346 346 PHE PHE C . n C 3 75 ARG 75 347 347 ARG ARG C . n C 3 76 TYR 76 348 348 TYR TYR C . n C 3 77 TRP 77 349 349 TRP TRP C . n C 3 78 PRO 78 350 350 PRO PRO C . n C 3 79 ASN 79 351 351 ASN ASN C . n C 3 80 ASN 80 352 352 ASN ASN C . n C 3 81 ASN 81 353 353 ASN ASN C . n C 3 82 SER 82 354 354 SER SER C . n C 3 83 ARG 83 355 355 ARG ARG C . n C 3 84 MET 84 356 356 MET MET C . n C 3 85 TYR 85 357 357 TYR TYR C . n C 3 86 VAL 86 358 358 VAL VAL C . n C 3 87 LEU 87 359 359 LEU LEU C . n C 3 88 GLU 88 360 360 GLU GLU C . n C 3 89 GLY 89 361 361 GLY GLY C . n C 3 90 VAL 90 362 362 VAL VAL C . n C 3 91 THR 91 363 363 THR THR C . n C 3 92 PRO 92 364 364 PRO PRO C . n C 3 93 CYS 93 365 365 CYS CYS C . n C 3 94 ILE 94 366 366 ILE ILE C . n C 3 95 GLN 95 367 367 GLN GLN C . n C 3 96 SER 96 368 368 SER SER C . n C 3 97 MET 97 369 369 MET MET C . n C 3 98 MET 98 370 370 MET MET C . n C 3 99 LEU 99 371 371 LEU LEU C . n C 3 100 GLN 100 372 372 GLN GLN C . n C 3 101 ALA 101 373 373 ALA ALA C . n C 3 102 GLY 102 374 374 GLY GLY C . n C 3 103 ASP 103 375 375 ASP ASP C . n C 3 104 THR 104 376 376 THR THR C . n C 3 105 VAL 105 377 377 VAL VAL C . n C 3 106 THR 106 378 378 THR THR C . n C 3 107 PHE 107 379 379 PHE PHE C . n C 3 108 SER 108 380 380 SER SER C . n C 3 109 ARG 109 381 381 ARG ARG C . n C 3 110 VAL 110 382 382 VAL VAL C . n C 3 111 ASP 111 383 383 ASP ASP C . n C 3 112 PRO 112 384 384 PRO PRO C . n C 3 113 GLY 113 385 385 GLY GLY C . n C 3 114 GLY 114 386 386 GLY GLY C . n C 3 115 LYS 115 387 387 LYS LYS C . n C 3 116 LEU 116 388 388 LEU LEU C . n C 3 117 ILE 117 389 389 ILE ILE C . n C 3 118 MET 118 390 390 MET MET C . n C 3 119 GLY 119 391 391 GLY GLY C . n C 3 120 SER 120 392 392 SER SER C . n C 3 121 ARG 121 393 393 ARG ARG C . n C 3 122 LYS 122 394 394 LYS LYS C . n C 3 123 ALA 123 395 395 ALA ALA C . n C 3 124 ALA 124 396 396 ALA ALA C . n C 3 125 ASN 125 397 397 ASN ASN C . n C 3 126 ALA 126 398 ? ? ? C . n C 3 127 GLY 127 399 ? ? ? C . n C 3 128 ASP 128 400 ? ? ? C . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2550 ? 1 MORE -14 ? 1 'SSA (A^2)' 10360 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-05-02 2 'Structure model' 1 1 2018-05-30 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_database_2.pdbx_DOI' 11 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" A DT 13 ? ? P A DT 13 ? ? OP1 A DT 13 ? ? 100.21 105.70 -5.49 0.90 N 2 1 "O5'" B DC 5 ? ? P B DC 5 ? ? OP1 B DC 5 ? ? 98.82 105.70 -6.88 0.90 N 3 1 "O5'" B DC 5 ? ? P B DC 5 ? ? OP2 B DC 5 ? ? 117.93 110.70 7.23 1.20 N 4 1 "O4'" B DC 9 ? ? "C1'" B DC 9 ? ? N1 B DC 9 ? ? 110.21 108.30 1.91 0.30 N 5 1 "C5'" B DA 10 ? ? "C4'" B DA 10 ? ? "O4'" B DA 10 ? ? 117.39 109.80 7.59 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU C 294 ? ? -99.98 -63.89 2 1 PRO C 322 ? ? -49.55 155.71 3 1 ARG C 338 ? ? -101.02 40.04 4 1 ASN C 352 ? ? 54.69 -118.83 5 1 SER C 354 ? ? -110.83 -135.45 6 1 ALA C 396 ? ? -27.66 -47.45 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 VAL _pdbx_validate_peptide_omega.auth_asym_id_1 C _pdbx_validate_peptide_omega.auth_seq_id_1 358 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 LEU _pdbx_validate_peptide_omega.auth_asym_id_2 C _pdbx_validate_peptide_omega.auth_seq_id_2 359 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 149.45 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C PRO 273 ? C PRO 1 2 1 Y 1 C LYS 274 ? C LYS 2 3 1 Y 1 C TYR 275 ? C TYR 3 4 1 Y 1 C THR 276 ? C THR 4 5 1 Y 1 C ASP 277 ? C ASP 5 6 1 Y 1 C LYS 278 ? C LYS 6 7 1 Y 1 C GLU 279 ? C GLU 7 8 1 Y 1 C VAL 280 ? C VAL 8 9 1 Y 1 C GLN 281 ? C GLN 9 10 1 Y 1 C GLN 282 ? C GLN 10 11 1 Y 1 C ILE 283 ? C ILE 11 12 1 Y 1 C SER 284 ? C SER 12 13 1 Y 1 C GLY 285 ? C GLY 13 14 1 Y 1 C ASN 286 ? C ASN 14 15 1 Y 1 C ALA 398 ? C ALA 126 16 1 Y 1 C GLY 399 ? C GLY 127 17 1 Y 1 C ASP 400 ? C ASP 128 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 ILE N N N N 280 ILE CA C N S 281 ILE C C N N 282 ILE O O N N 283 ILE CB C N S 284 ILE CG1 C N N 285 ILE CG2 C N N 286 ILE CD1 C N N 287 ILE OXT O N N 288 ILE H H N N 289 ILE H2 H N N 290 ILE HA H N N 291 ILE HB H N N 292 ILE HG12 H N N 293 ILE HG13 H N N 294 ILE HG21 H N N 295 ILE HG22 H N N 296 ILE HG23 H N N 297 ILE HD11 H N N 298 ILE HD12 H N N 299 ILE HD13 H N N 300 ILE HXT H N N 301 LEU N N N N 302 LEU CA C N S 303 LEU C C N N 304 LEU O O N N 305 LEU CB C N N 306 LEU CG C N N 307 LEU CD1 C N N 308 LEU CD2 C N N 309 LEU OXT O N N 310 LEU H H N N 311 LEU H2 H N N 312 LEU HA H N N 313 LEU HB2 H N N 314 LEU HB3 H N N 315 LEU HG H N N 316 LEU HD11 H N N 317 LEU HD12 H N N 318 LEU HD13 H N N 319 LEU HD21 H N N 320 LEU HD22 H N N 321 LEU HD23 H N N 322 LEU HXT H N N 323 LYS N N N N 324 LYS CA C N S 325 LYS C C N N 326 LYS O O N N 327 LYS CB C N N 328 LYS CG C N N 329 LYS CD C N N 330 LYS CE C N N 331 LYS NZ N N N 332 LYS OXT O N N 333 LYS H H N N 334 LYS H2 H N N 335 LYS HA H N N 336 LYS HB2 H N N 337 LYS HB3 H N N 338 LYS HG2 H N N 339 LYS HG3 H N N 340 LYS HD2 H N N 341 LYS HD3 H N N 342 LYS HE2 H N N 343 LYS HE3 H N N 344 LYS HZ1 H N N 345 LYS HZ2 H N N 346 LYS HZ3 H N N 347 LYS HXT H N N 348 MET N N N N 349 MET CA C N S 350 MET C C N N 351 MET O O N N 352 MET CB C N N 353 MET CG C N N 354 MET SD S N N 355 MET CE C N N 356 MET OXT O N N 357 MET H H N N 358 MET H2 H N N 359 MET HA H N N 360 MET HB2 H N N 361 MET HB3 H N N 362 MET HG2 H N N 363 MET HG3 H N N 364 MET HE1 H N N 365 MET HE2 H N N 366 MET HE3 H N N 367 MET HXT H N N 368 PHE N N N N 369 PHE CA C N S 370 PHE C C N N 371 PHE O O N N 372 PHE CB C N N 373 PHE CG C Y N 374 PHE CD1 C Y N 375 PHE CD2 C Y N 376 PHE CE1 C Y N 377 PHE CE2 C Y N 378 PHE CZ C Y N 379 PHE OXT O N N 380 PHE H H N N 381 PHE H2 H N N 382 PHE HA H N N 383 PHE HB2 H N N 384 PHE HB3 H N N 385 PHE HD1 H N N 386 PHE HD2 H N N 387 PHE HE1 H N N 388 PHE HE2 H N N 389 PHE HZ H N N 390 PHE HXT H N N 391 PRO N N N N 392 PRO CA C N S 393 PRO C C N N 394 PRO O O N N 395 PRO CB C N N 396 PRO CG C N N 397 PRO CD C N N 398 PRO OXT O N N 399 PRO H H N N 400 PRO HA H N N 401 PRO HB2 H N N 402 PRO HB3 H N N 403 PRO HG2 H N N 404 PRO HG3 H N N 405 PRO HD2 H N N 406 PRO HD3 H N N 407 PRO HXT H N N 408 SER N N N N 409 SER CA C N S 410 SER C C N N 411 SER O O N N 412 SER CB C N N 413 SER OG O N N 414 SER OXT O N N 415 SER H H N N 416 SER H2 H N N 417 SER HA H N N 418 SER HB2 H N N 419 SER HB3 H N N 420 SER HG H N N 421 SER HXT H N N 422 THR N N N N 423 THR CA C N S 424 THR C C N N 425 THR O O N N 426 THR CB C N R 427 THR OG1 O N N 428 THR CG2 C N N 429 THR OXT O N N 430 THR H H N N 431 THR H2 H N N 432 THR HA H N N 433 THR HB H N N 434 THR HG1 H N N 435 THR HG21 H N N 436 THR HG22 H N N 437 THR HG23 H N N 438 THR HXT H N N 439 TRP N N N N 440 TRP CA C N S 441 TRP C C N N 442 TRP O O N N 443 TRP CB C N N 444 TRP CG C Y N 445 TRP CD1 C Y N 446 TRP CD2 C Y N 447 TRP NE1 N Y N 448 TRP CE2 C Y N 449 TRP CE3 C Y N 450 TRP CZ2 C Y N 451 TRP CZ3 C Y N 452 TRP CH2 C Y N 453 TRP OXT O N N 454 TRP H H N N 455 TRP H2 H N N 456 TRP HA H N N 457 TRP HB2 H N N 458 TRP HB3 H N N 459 TRP HD1 H N N 460 TRP HE1 H N N 461 TRP HE3 H N N 462 TRP HZ2 H N N 463 TRP HZ3 H N N 464 TRP HH2 H N N 465 TRP HXT H N N 466 TYR N N N N 467 TYR CA C N S 468 TYR C C N N 469 TYR O O N N 470 TYR CB C N N 471 TYR CG C Y N 472 TYR CD1 C Y N 473 TYR CD2 C Y N 474 TYR CE1 C Y N 475 TYR CE2 C Y N 476 TYR CZ C Y N 477 TYR OH O N N 478 TYR OXT O N N 479 TYR H H N N 480 TYR H2 H N N 481 TYR HA H N N 482 TYR HB2 H N N 483 TYR HB3 H N N 484 TYR HD1 H N N 485 TYR HD2 H N N 486 TYR HE1 H N N 487 TYR HE2 H N N 488 TYR HH H N N 489 TYR HXT H N N 490 VAL N N N N 491 VAL CA C N S 492 VAL C C N N 493 VAL O O N N 494 VAL CB C N N 495 VAL CG1 C N N 496 VAL CG2 C N N 497 VAL OXT O N N 498 VAL H H N N 499 VAL H2 H N N 500 VAL HA H N N 501 VAL HB H N N 502 VAL HG11 H N N 503 VAL HG12 H N N 504 VAL HG13 H N N 505 VAL HG21 H N N 506 VAL HG22 H N N 507 VAL HG23 H N N 508 VAL HXT H N N 509 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 ILE N CA sing N N 278 ILE N H sing N N 279 ILE N H2 sing N N 280 ILE CA C sing N N 281 ILE CA CB sing N N 282 ILE CA HA sing N N 283 ILE C O doub N N 284 ILE C OXT sing N N 285 ILE CB CG1 sing N N 286 ILE CB CG2 sing N N 287 ILE CB HB sing N N 288 ILE CG1 CD1 sing N N 289 ILE CG1 HG12 sing N N 290 ILE CG1 HG13 sing N N 291 ILE CG2 HG21 sing N N 292 ILE CG2 HG22 sing N N 293 ILE CG2 HG23 sing N N 294 ILE CD1 HD11 sing N N 295 ILE CD1 HD12 sing N N 296 ILE CD1 HD13 sing N N 297 ILE OXT HXT sing N N 298 LEU N CA sing N N 299 LEU N H sing N N 300 LEU N H2 sing N N 301 LEU CA C sing N N 302 LEU CA CB sing N N 303 LEU CA HA sing N N 304 LEU C O doub N N 305 LEU C OXT sing N N 306 LEU CB CG sing N N 307 LEU CB HB2 sing N N 308 LEU CB HB3 sing N N 309 LEU CG CD1 sing N N 310 LEU CG CD2 sing N N 311 LEU CG HG sing N N 312 LEU CD1 HD11 sing N N 313 LEU CD1 HD12 sing N N 314 LEU CD1 HD13 sing N N 315 LEU CD2 HD21 sing N N 316 LEU CD2 HD22 sing N N 317 LEU CD2 HD23 sing N N 318 LEU OXT HXT sing N N 319 LYS N CA sing N N 320 LYS N H sing N N 321 LYS N H2 sing N N 322 LYS CA C sing N N 323 LYS CA CB sing N N 324 LYS CA HA sing N N 325 LYS C O doub N N 326 LYS C OXT sing N N 327 LYS CB CG sing N N 328 LYS CB HB2 sing N N 329 LYS CB HB3 sing N N 330 LYS CG CD sing N N 331 LYS CG HG2 sing N N 332 LYS CG HG3 sing N N 333 LYS CD CE sing N N 334 LYS CD HD2 sing N N 335 LYS CD HD3 sing N N 336 LYS CE NZ sing N N 337 LYS CE HE2 sing N N 338 LYS CE HE3 sing N N 339 LYS NZ HZ1 sing N N 340 LYS NZ HZ2 sing N N 341 LYS NZ HZ3 sing N N 342 LYS OXT HXT sing N N 343 MET N CA sing N N 344 MET N H sing N N 345 MET N H2 sing N N 346 MET CA C sing N N 347 MET CA CB sing N N 348 MET CA HA sing N N 349 MET C O doub N N 350 MET C OXT sing N N 351 MET CB CG sing N N 352 MET CB HB2 sing N N 353 MET CB HB3 sing N N 354 MET CG SD sing N N 355 MET CG HG2 sing N N 356 MET CG HG3 sing N N 357 MET SD CE sing N N 358 MET CE HE1 sing N N 359 MET CE HE2 sing N N 360 MET CE HE3 sing N N 361 MET OXT HXT sing N N 362 PHE N CA sing N N 363 PHE N H sing N N 364 PHE N H2 sing N N 365 PHE CA C sing N N 366 PHE CA CB sing N N 367 PHE CA HA sing N N 368 PHE C O doub N N 369 PHE C OXT sing N N 370 PHE CB CG sing N N 371 PHE CB HB2 sing N N 372 PHE CB HB3 sing N N 373 PHE CG CD1 doub Y N 374 PHE CG CD2 sing Y N 375 PHE CD1 CE1 sing Y N 376 PHE CD1 HD1 sing N N 377 PHE CD2 CE2 doub Y N 378 PHE CD2 HD2 sing N N 379 PHE CE1 CZ doub Y N 380 PHE CE1 HE1 sing N N 381 PHE CE2 CZ sing Y N 382 PHE CE2 HE2 sing N N 383 PHE CZ HZ sing N N 384 PHE OXT HXT sing N N 385 PRO N CA sing N N 386 PRO N CD sing N N 387 PRO N H sing N N 388 PRO CA C sing N N 389 PRO CA CB sing N N 390 PRO CA HA sing N N 391 PRO C O doub N N 392 PRO C OXT sing N N 393 PRO CB CG sing N N 394 PRO CB HB2 sing N N 395 PRO CB HB3 sing N N 396 PRO CG CD sing N N 397 PRO CG HG2 sing N N 398 PRO CG HG3 sing N N 399 PRO CD HD2 sing N N 400 PRO CD HD3 sing N N 401 PRO OXT HXT sing N N 402 SER N CA sing N N 403 SER N H sing N N 404 SER N H2 sing N N 405 SER CA C sing N N 406 SER CA CB sing N N 407 SER CA HA sing N N 408 SER C O doub N N 409 SER C OXT sing N N 410 SER CB OG sing N N 411 SER CB HB2 sing N N 412 SER CB HB3 sing N N 413 SER OG HG sing N N 414 SER OXT HXT sing N N 415 THR N CA sing N N 416 THR N H sing N N 417 THR N H2 sing N N 418 THR CA C sing N N 419 THR CA CB sing N N 420 THR CA HA sing N N 421 THR C O doub N N 422 THR C OXT sing N N 423 THR CB OG1 sing N N 424 THR CB CG2 sing N N 425 THR CB HB sing N N 426 THR OG1 HG1 sing N N 427 THR CG2 HG21 sing N N 428 THR CG2 HG22 sing N N 429 THR CG2 HG23 sing N N 430 THR OXT HXT sing N N 431 TRP N CA sing N N 432 TRP N H sing N N 433 TRP N H2 sing N N 434 TRP CA C sing N N 435 TRP CA CB sing N N 436 TRP CA HA sing N N 437 TRP C O doub N N 438 TRP C OXT sing N N 439 TRP CB CG sing N N 440 TRP CB HB2 sing N N 441 TRP CB HB3 sing N N 442 TRP CG CD1 doub Y N 443 TRP CG CD2 sing Y N 444 TRP CD1 NE1 sing Y N 445 TRP CD1 HD1 sing N N 446 TRP CD2 CE2 doub Y N 447 TRP CD2 CE3 sing Y N 448 TRP NE1 CE2 sing Y N 449 TRP NE1 HE1 sing N N 450 TRP CE2 CZ2 sing Y N 451 TRP CE3 CZ3 doub Y N 452 TRP CE3 HE3 sing N N 453 TRP CZ2 CH2 doub Y N 454 TRP CZ2 HZ2 sing N N 455 TRP CZ3 CH2 sing Y N 456 TRP CZ3 HZ3 sing N N 457 TRP CH2 HH2 sing N N 458 TRP OXT HXT sing N N 459 TYR N CA sing N N 460 TYR N H sing N N 461 TYR N H2 sing N N 462 TYR CA C sing N N 463 TYR CA CB sing N N 464 TYR CA HA sing N N 465 TYR C O doub N N 466 TYR C OXT sing N N 467 TYR CB CG sing N N 468 TYR CB HB2 sing N N 469 TYR CB HB3 sing N N 470 TYR CG CD1 doub Y N 471 TYR CG CD2 sing Y N 472 TYR CD1 CE1 sing Y N 473 TYR CD1 HD1 sing N N 474 TYR CD2 CE2 doub Y N 475 TYR CD2 HD2 sing N N 476 TYR CE1 CZ doub Y N 477 TYR CE1 HE1 sing N N 478 TYR CE2 CZ sing Y N 479 TYR CE2 HE2 sing N N 480 TYR CZ OH sing N N 481 TYR OH HH sing N N 482 TYR OXT HXT sing N N 483 VAL N CA sing N N 484 VAL N H sing N N 485 VAL N H2 sing N N 486 VAL CA C sing N N 487 VAL CA CB sing N N 488 VAL CA HA sing N N 489 VAL C O doub N N 490 VAL C OXT sing N N 491 VAL CB CG1 sing N N 492 VAL CB CG2 sing N N 493 VAL CB HB sing N N 494 VAL CG1 HG11 sing N N 495 VAL CG1 HG12 sing N N 496 VAL CG1 HG13 sing N N 497 VAL CG2 HG21 sing N N 498 VAL CG2 HG22 sing N N 499 VAL CG2 HG23 sing N N 500 VAL OXT HXT sing N N 501 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5YZZ 'double helix' 5YZZ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 2 1_555 B DA 13 1_555 0.387 -0.161 0.364 -10.625 -14.692 1.914 1 A_DT2:DA13_B A 2 ? B 13 ? 20 1 1 A DT 3 1_555 B DA 12 1_555 0.247 -0.134 0.102 -9.427 -17.966 -1.807 2 A_DT3:DA12_B A 3 ? B 12 ? 20 1 1 A DC 4 1_555 B DG 11 1_555 0.360 -0.221 0.289 -4.689 -13.675 -0.155 3 A_DC4:DG11_B A 4 ? B 11 ? 19 1 1 A DT 5 1_555 B DA 10 1_555 0.074 -0.083 0.582 -11.765 -13.485 0.324 4 A_DT5:DA10_B A 5 ? B 10 ? 20 1 1 A DG 6 1_555 B DC 9 1_555 -0.207 -0.266 0.182 1.181 -2.697 -4.742 5 A_DG6:DC9_B A 6 ? B 9 ? 19 1 1 A DC 7 1_555 B DG 8 1_555 -0.124 -0.207 0.455 1.108 -13.709 -3.476 6 A_DC7:DG8_B A 7 ? B 8 ? 19 1 1 A DA 8 1_555 B DT 7 1_555 0.137 -0.159 0.324 0.558 -3.844 -1.820 7 A_DA8:DT7_B A 8 ? B 7 ? 20 1 1 A DT 9 1_555 B DA 6 1_555 -0.282 -0.314 0.032 -0.816 -16.167 -4.775 8 A_DT9:DA6_B A 9 ? B 6 ? 20 1 1 A DG 10 1_555 B DC 5 1_555 -0.134 -0.241 0.036 -0.865 -11.860 -0.391 9 A_DG10:DC5_B A 10 ? B 5 ? 19 1 1 A DG 11 1_555 B DC 4 1_555 -0.380 -0.279 -0.276 -4.203 -7.719 -0.078 10 A_DG11:DC4_B A 11 ? B 4 ? 19 1 1 A DA 12 1_555 B DT 3 1_555 -0.212 -0.225 -0.238 -2.320 -8.796 -0.421 11 A_DA12:DT3_B A 12 ? B 3 ? 20 1 1 A DT 13 1_555 B DA 2 1_555 0.323 -0.135 0.195 9.917 -10.349 -0.486 12 A_DT13:DA2_B A 13 ? B 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 2 1_555 B DA 13 1_555 A DT 3 1_555 B DA 12 1_555 -0.551 -0.447 3.273 2.849 5.140 28.611 -1.983 1.702 3.079 10.264 -5.688 29.196 1 AA_DT2DT3:DA12DA13_BB A 2 ? B 13 ? A 3 ? B 12 ? 1 A DT 3 1_555 B DA 12 1_555 A DC 4 1_555 B DG 11 1_555 0.030 -0.292 3.174 -1.277 2.732 36.561 -0.825 -0.217 3.142 4.345 2.031 36.681 2 AA_DT3DC4:DG11DA12_BB A 3 ? B 12 ? A 4 ? B 11 ? 1 A DC 4 1_555 B DG 11 1_555 A DT 5 1_555 B DA 10 1_555 0.493 -0.482 3.395 1.304 7.246 32.599 -2.070 -0.636 3.233 12.708 -2.287 33.398 3 AA_DC4DT5:DA10DG11_BB A 4 ? B 11 ? A 5 ? B 10 ? 1 A DT 5 1_555 B DA 10 1_555 A DG 6 1_555 B DC 9 1_555 0.120 0.712 3.061 4.414 3.558 31.609 0.681 0.536 3.108 6.467 -8.022 32.101 4 AA_DT5DG6:DC9DA10_BB A 5 ? B 10 ? A 6 ? B 9 ? 1 A DG 6 1_555 B DC 9 1_555 A DC 7 1_555 B DG 8 1_555 0.557 -0.743 3.393 -1.931 -0.513 23.085 -1.666 -2.080 3.352 -1.278 4.814 23.170 5 AA_DG6DC7:DG8DC9_BB A 6 ? B 9 ? A 7 ? B 8 ? 1 A DC 7 1_555 B DG 8 1_555 A DA 8 1_555 B DT 7 1_555 -0.078 -0.117 3.317 3.364 -2.047 45.362 0.032 0.401 3.305 -2.648 -4.352 45.524 6 AA_DC7DA8:DT7DG8_BB A 7 ? B 8 ? A 8 ? B 7 ? 1 A DA 8 1_555 B DT 7 1_555 A DT 9 1_555 B DA 6 1_555 -0.694 -0.635 3.343 0.745 -3.678 28.242 -0.422 1.585 3.378 -7.496 -1.519 28.486 7 AA_DA8DT9:DA6DT7_BB A 8 ? B 7 ? A 9 ? B 6 ? 1 A DT 9 1_555 B DA 6 1_555 A DG 10 1_555 B DC 5 1_555 1.031 1.269 3.401 3.357 5.458 40.378 1.172 -1.079 3.606 7.847 -4.826 40.862 8 AA_DT9DG10:DC5DA6_BB A 9 ? B 6 ? A 10 ? B 5 ? 1 A DG 10 1_555 B DC 5 1_555 A DG 11 1_555 B DC 4 1_555 -0.337 2.095 3.429 -2.156 -4.366 44.107 3.188 0.243 3.230 -5.793 2.861 44.361 9 AA_DG10DG11:DC4DC5_BB A 10 ? B 5 ? A 11 ? B 4 ? 1 A DG 11 1_555 B DC 4 1_555 A DA 12 1_555 B DT 3 1_555 -0.448 0.158 3.292 -5.607 7.103 29.410 -1.131 -0.283 3.268 13.590 10.729 30.741 10 AA_DG11DA12:DT3DC4_BB A 11 ? B 4 ? A 12 ? B 3 ? 1 A DA 12 1_555 B DT 3 1_555 A DT 13 1_555 B DA 2 1_555 0.637 -0.423 3.034 -4.505 4.416 34.533 -1.302 -1.669 2.856 7.363 7.511 35.087 11 AA_DA12DT13:DA2DT3_BB A 12 ? B 3 ? A 13 ? B 2 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5YZY _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #