HEADER OXIDOREDUCTASE 02-JAN-18 5Z2G TITLE CRYSTAL STRUCTURE OF L-AMINO ACID OXIDASE FROM VENOM OF NAJA ATRA COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-AMINO ACID OXIDASE; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NAJA ATRA; SOURCE 3 ORGANISM_TAXID: 8656 KEYWDS L-AMINO ACID OXIDASE, FLAVOENZYME, NAJA ATRA, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.V.KUMAR,K.Y.CHIEN,W.G.WU,C.C.LIN,L.C.CHIANG,T.H.LIN REVDAT 3 22-NOV-23 5Z2G 1 HETSYN REVDAT 2 29-JUL-20 5Z2G 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 20-JUN-18 5Z2G 0 JRNL AUTH J.V.KUMAR,K.Y.CHIEN,C.C.LIN,L.C.CHIANG,T.H.LIN,W.G.WU JRNL TITL CRYSTAL STRUCTURE OF L-AMINO ACID OXIDASE FROM NAJA ATRA JRNL TITL 2 (TAIWAN COBRA) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.6 REMARK 3 NUMBER OF REFLECTIONS : 39038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3430 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.4343 - 7.7604 0.99 2786 160 0.1487 0.1750 REMARK 3 2 7.7604 - 6.1856 1.00 2824 149 0.1741 0.2078 REMARK 3 3 6.1856 - 5.4114 1.00 2822 142 0.1714 0.2003 REMARK 3 4 5.4114 - 4.9201 1.00 2821 147 0.1528 0.1778 REMARK 3 5 4.9201 - 4.5693 0.99 2759 146 0.1357 0.2246 REMARK 3 6 4.5693 - 4.3012 0.99 2846 159 0.1339 0.1590 REMARK 3 7 4.3012 - 4.0866 1.00 2790 151 0.1438 0.1936 REMARK 3 8 4.0866 - 3.9093 1.00 2770 148 0.1431 0.1799 REMARK 3 9 3.9093 - 3.7592 1.00 2834 148 0.1636 0.1971 REMARK 3 10 3.7592 - 3.6298 1.00 2834 151 0.1705 0.2134 REMARK 3 11 3.6298 - 3.5166 1.00 2817 148 0.1717 0.2490 REMARK 3 12 3.5166 - 3.4163 1.00 2810 156 0.1892 0.2250 REMARK 3 13 3.4163 - 3.3265 1.00 2870 156 0.1946 0.2747 REMARK 3 14 3.3265 - 3.2455 1.00 2770 144 0.1977 0.2758 REMARK 3 15 3.2455 - 3.1719 0.99 2761 142 0.1947 0.2761 REMARK 3 16 3.1719 - 3.1045 0.97 2738 156 0.2046 0.2721 REMARK 3 17 3.1045 - 3.0424 0.95 2667 141 0.1982 0.2386 REMARK 3 18 3.0424 - 2.9851 0.91 2549 137 0.2113 0.2927 REMARK 3 19 2.9851 - 2.9319 0.87 2436 129 0.2175 0.2596 REMARK 3 20 2.9319 - 2.8822 0.83 2371 118 0.2137 0.3068 REMARK 3 21 2.8822 - 2.8358 0.78 2152 122 0.2125 0.2767 REMARK 3 22 2.8358 - 2.7922 0.72 2090 110 0.2020 0.2682 REMARK 3 23 2.7922 - 2.7512 0.65 1794 95 0.2157 0.2428 REMARK 3 24 2.7512 - 2.7125 0.60 1697 89 0.2193 0.3007 REMARK 3 25 2.7125 - 2.6759 0.56 1592 86 0.2267 0.2847 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 8064 REMARK 3 ANGLE : 1.247 10930 REMARK 3 CHIRALITY : 0.061 1172 REMARK 3 PLANARITY : 0.010 1378 REMARK 3 DIHEDRAL : 13.498 4754 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Z2G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006325. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39179 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2IID REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1MM HEPES, 10% PEG 6000, PH 7.2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 142.84667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.42333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 71.42333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 142.84667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 VAL A 3 REMARK 465 LEU A 4 REMARK 465 PHE A 5 REMARK 465 ILE A 6 REMARK 465 PHE A 7 REMARK 465 SER A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 PHE A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 LEU A 15 REMARK 465 GLU A 16 REMARK 465 SER A 17 REMARK 465 CYS A 18 REMARK 465 ALA A 19 REMARK 465 ASP A 20 REMARK 465 ASP A 21 REMARK 465 ARG A 22 REMARK 465 ARG A 23 REMARK 465 SER A 24 REMARK 465 LYS A 502 REMARK 465 PRO A 503 REMARK 465 SER A 504 REMARK 465 LYS A 505 REMARK 465 ILE A 506 REMARK 465 ARG A 507 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 VAL B 3 REMARK 465 LEU B 4 REMARK 465 PHE B 5 REMARK 465 ILE B 6 REMARK 465 PHE B 7 REMARK 465 SER B 8 REMARK 465 LEU B 9 REMARK 465 LEU B 10 REMARK 465 PHE B 11 REMARK 465 LEU B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 LEU B 15 REMARK 465 GLU B 16 REMARK 465 SER B 17 REMARK 465 CYS B 18 REMARK 465 ALA B 19 REMARK 465 ASP B 20 REMARK 465 ASP B 21 REMARK 465 ARG B 22 REMARK 465 ARG B 23 REMARK 465 SER B 24 REMARK 465 LYS B 502 REMARK 465 PRO B 503 REMARK 465 SER B 504 REMARK 465 LYS B 505 REMARK 465 ILE B 506 REMARK 465 ARG B 507 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 27 CA - CB - CG ANGL. DEV. = -16.6 DEGREES REMARK 500 LEU B 26 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 ARG B 181 CB - CG - CD ANGL. DEV. = 17.1 DEGREES REMARK 500 ARG B 181 CG - CD - NE ANGL. DEV. = -21.1 DEGREES REMARK 500 ARG B 181 CD - NE - CZ ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 60 43.12 -103.55 REMARK 500 MET A 108 -11.82 -140.96 REMARK 500 THR A 190 -149.31 -137.35 REMARK 500 ALA A 244 -5.86 -58.28 REMARK 500 THR A 296 43.05 -141.88 REMARK 500 ARG A 370 -60.64 62.24 REMARK 500 ALA A 392 -122.52 52.22 REMARK 500 SER A 445 -73.23 -112.10 REMARK 500 TYR A 452 -1.60 82.45 REMARK 500 GLU B 48 128.81 -39.62 REMARK 500 ALA B 60 41.64 -105.89 REMARK 500 MET B 108 -12.25 -142.62 REMARK 500 THR B 190 -151.04 -137.49 REMARK 500 ALA B 244 -6.87 -55.55 REMARK 500 THR B 296 41.93 -141.26 REMARK 500 ARG B 370 -59.04 61.72 REMARK 500 ALA B 392 -120.58 51.83 REMARK 500 SER B 445 -72.69 -110.74 REMARK 500 TYR B 452 -4.18 82.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 181 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 5Z2G A 1 507 PDB 5Z2G 5Z2G 1 507 DBREF 5Z2G B 1 507 PDB 5Z2G 5Z2G 1 507 SEQRES 1 A 507 MET ASN VAL LEU PHE ILE PHE SER LEU LEU PHE LEU ALA SEQRES 2 A 507 ALA LEU GLU SER CYS ALA ASP ASP ARG ARG SER PRO LEU SEQRES 3 A 507 GLU LYS CYS PHE GLN GLU ALA ASP TYR GLU ASP PHE LEU SEQRES 4 A 507 GLU ILE ALA ARG ASN GLY LEU LYS GLU THR SER ASN PRO SEQRES 5 A 507 LYS HIS VAL VAL VAL VAL GLY ALA GLY MET ALA GLY LEU SEQRES 6 A 507 SER ALA ALA TYR VAL LEU ALA GLY ALA GLY HIS LYS VAL SEQRES 7 A 507 THR LEU LEU GLU ALA SER GLU ARG VAL GLY GLY ARG VAL SEQRES 8 A 507 ILE THR TYR HIS ASN ASP ARG GLU GLY TRP TYR VAL ASN SEQRES 9 A 507 MET GLY PRO MET ARG LEU PRO GLU ARG HIS ARG ILE VAL SEQRES 10 A 507 ARG GLU TYR ILE ARG LYS PHE GLY LEU LYS LEU ASN GLU SEQRES 11 A 507 PHE PHE GLN GLU ASN GLU ASN ALA TRP TYR TYR ILE ASN SEQRES 12 A 507 ASN ILE ARG LYS ARG VAL TRP GLU VAL LYS LYS ASP PRO SEQRES 13 A 507 SER LEU LEU LYS TYR PRO VAL LYS PRO SER GLU GLU GLY SEQRES 14 A 507 LYS SER ALA SER GLN LEU TYR GLN GLU SER LEU ARG LYS SEQRES 15 A 507 VAL ILE GLU GLU LEU LYS ARG THR ASN CYS SER TYR ILE SEQRES 16 A 507 LEU ASN LYS TYR ASP SER TYR SER THR LYS GLU TYR LEU SEQRES 17 A 507 ILE LYS GLU GLY ASN LEU SER ARG GLY ALA VAL ASP MET SEQRES 18 A 507 ILE GLY ASP LEU LEU ASN GLU ASP SER SER TYR HIS LEU SEQRES 19 A 507 SER PHE MET GLU SER LEU LYS SER ASP ALA LEU PHE SER SEQRES 20 A 507 TYR GLU LYS ARG PHE ASP GLU ILE VAL GLY GLY PHE ASP SEQRES 21 A 507 GLN LEU PRO ILE SER MET TYR GLN ALA ILE ALA GLU MET SEQRES 22 A 507 VAL HIS LEU ASN ALA ARG VAL ILE LYS ILE GLN TYR ASP SEQRES 23 A 507 ALA GLU LYS VAL ARG VAL THR TYR GLN THR PRO ALA LYS SEQRES 24 A 507 THR PHE VAL THR ALA ASP TYR VAL ILE VAL CYS SER THR SEQRES 25 A 507 SER ARG ALA ALA ARG ARG ILE TYR PHE GLU PRO PRO LEU SEQRES 26 A 507 PRO PRO LYS LYS ALA HIS ALA LEU ARG SER ILE HIS TYR SEQRES 27 A 507 ARG SER ALA THR LYS ILE PHE LEU THR CYS SER LYS LYS SEQRES 28 A 507 PHE TRP GLU ALA ASP GLY ILE HIS GLY GLY LYS SER THR SEQRES 29 A 507 THR ASP LEU PRO SER ARG PHE ILE HIS TYR PRO ASN HIS SEQRES 30 A 507 ASN PHE THR SER GLY ILE GLY VAL ILE MET ALA TYR VAL SEQRES 31 A 507 LEU ALA ASP ASP SER ASP PHE PHE GLN ALA LEU ASP THR SEQRES 32 A 507 LYS THR CYS ALA ASP ILE VAL ILE ASN ASP LEU SER LEU SEQRES 33 A 507 ILE HIS ASP LEU PRO LYS ARG GLU ILE GLN ALA LEU CYS SEQRES 34 A 507 TYR PRO SER ILE LYS LYS TRP ASN LEU ASP LYS TYR THR SEQRES 35 A 507 MET GLY SER ILE THR SER PHE THR PRO TYR GLN PHE GLN SEQRES 36 A 507 ASP TYR PHE GLU SER ALA ALA ALA PRO VAL GLY ARG ILE SEQRES 37 A 507 HIS PHE ALA GLY GLU TYR THR GLY ARG PHE HIS GLY TRP SEQRES 38 A 507 ILE ASP SER THR ILE MET THR GLY LEU ARG ALA ALA ARG SEQRES 39 A 507 ASP VAL ASN ARG ALA SER GLN LYS PRO SER LYS ILE ARG SEQRES 1 B 507 MET ASN VAL LEU PHE ILE PHE SER LEU LEU PHE LEU ALA SEQRES 2 B 507 ALA LEU GLU SER CYS ALA ASP ASP ARG ARG SER PRO LEU SEQRES 3 B 507 GLU LYS CYS PHE GLN GLU ALA ASP TYR GLU ASP PHE LEU SEQRES 4 B 507 GLU ILE ALA ARG ASN GLY LEU LYS GLU THR SER ASN PRO SEQRES 5 B 507 LYS HIS VAL VAL VAL VAL GLY ALA GLY MET ALA GLY LEU SEQRES 6 B 507 SER ALA ALA TYR VAL LEU ALA GLY ALA GLY HIS LYS VAL SEQRES 7 B 507 THR LEU LEU GLU ALA SER GLU ARG VAL GLY GLY ARG VAL SEQRES 8 B 507 ILE THR TYR HIS ASN ASP ARG GLU GLY TRP TYR VAL ASN SEQRES 9 B 507 MET GLY PRO MET ARG LEU PRO GLU ARG HIS ARG ILE VAL SEQRES 10 B 507 ARG GLU TYR ILE ARG LYS PHE GLY LEU LYS LEU ASN GLU SEQRES 11 B 507 PHE PHE GLN GLU ASN GLU ASN ALA TRP TYR TYR ILE ASN SEQRES 12 B 507 ASN ILE ARG LYS ARG VAL TRP GLU VAL LYS LYS ASP PRO SEQRES 13 B 507 SER LEU LEU LYS TYR PRO VAL LYS PRO SER GLU GLU GLY SEQRES 14 B 507 LYS SER ALA SER GLN LEU TYR GLN GLU SER LEU ARG LYS SEQRES 15 B 507 VAL ILE GLU GLU LEU LYS ARG THR ASN CYS SER TYR ILE SEQRES 16 B 507 LEU ASN LYS TYR ASP SER TYR SER THR LYS GLU TYR LEU SEQRES 17 B 507 ILE LYS GLU GLY ASN LEU SER ARG GLY ALA VAL ASP MET SEQRES 18 B 507 ILE GLY ASP LEU LEU ASN GLU ASP SER SER TYR HIS LEU SEQRES 19 B 507 SER PHE MET GLU SER LEU LYS SER ASP ALA LEU PHE SER SEQRES 20 B 507 TYR GLU LYS ARG PHE ASP GLU ILE VAL GLY GLY PHE ASP SEQRES 21 B 507 GLN LEU PRO ILE SER MET TYR GLN ALA ILE ALA GLU MET SEQRES 22 B 507 VAL HIS LEU ASN ALA ARG VAL ILE LYS ILE GLN TYR ASP SEQRES 23 B 507 ALA GLU LYS VAL ARG VAL THR TYR GLN THR PRO ALA LYS SEQRES 24 B 507 THR PHE VAL THR ALA ASP TYR VAL ILE VAL CYS SER THR SEQRES 25 B 507 SER ARG ALA ALA ARG ARG ILE TYR PHE GLU PRO PRO LEU SEQRES 26 B 507 PRO PRO LYS LYS ALA HIS ALA LEU ARG SER ILE HIS TYR SEQRES 27 B 507 ARG SER ALA THR LYS ILE PHE LEU THR CYS SER LYS LYS SEQRES 28 B 507 PHE TRP GLU ALA ASP GLY ILE HIS GLY GLY LYS SER THR SEQRES 29 B 507 THR ASP LEU PRO SER ARG PHE ILE HIS TYR PRO ASN HIS SEQRES 30 B 507 ASN PHE THR SER GLY ILE GLY VAL ILE MET ALA TYR VAL SEQRES 31 B 507 LEU ALA ASP ASP SER ASP PHE PHE GLN ALA LEU ASP THR SEQRES 32 B 507 LYS THR CYS ALA ASP ILE VAL ILE ASN ASP LEU SER LEU SEQRES 33 B 507 ILE HIS ASP LEU PRO LYS ARG GLU ILE GLN ALA LEU CYS SEQRES 34 B 507 TYR PRO SER ILE LYS LYS TRP ASN LEU ASP LYS TYR THR SEQRES 35 B 507 MET GLY SER ILE THR SER PHE THR PRO TYR GLN PHE GLN SEQRES 36 B 507 ASP TYR PHE GLU SER ALA ALA ALA PRO VAL GLY ARG ILE SEQRES 37 B 507 HIS PHE ALA GLY GLU TYR THR GLY ARG PHE HIS GLY TRP SEQRES 38 B 507 ILE ASP SER THR ILE MET THR GLY LEU ARG ALA ALA ARG SEQRES 39 B 507 ASP VAL ASN ARG ALA SER GLN LYS PRO SER LYS ILE ARG HET NAG A 601 14 HET NAG A 602 14 HET NAG A 603 14 HET FAD A 604 53 HET NAG B 601 14 HET FAD B 602 53 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 6 FAD 2(C27 H33 N9 O15 P2) FORMUL 9 HOH *100(H2 O) HELIX 1 AA1 LEU A 26 GLN A 31 1 6 HELIX 2 AA2 ASP A 34 GLY A 45 1 12 HELIX 3 AA3 GLY A 61 ALA A 74 1 14 HELIX 4 AA4 HIS A 114 PHE A 124 1 11 HELIX 5 AA5 VAL A 149 ASP A 155 1 7 HELIX 6 AA6 PRO A 156 LYS A 160 5 5 HELIX 7 AA7 LYS A 164 GLU A 168 5 5 HELIX 8 AA8 SER A 171 SER A 179 1 9 HELIX 9 AA9 LEU A 180 THR A 190 1 11 HELIX 10 AB1 ASN A 191 ASP A 200 1 10 HELIX 11 AB2 SER A 203 GLU A 211 1 9 HELIX 12 AB3 SER A 215 LEU A 226 1 12 HELIX 13 AB4 GLU A 228 TYR A 232 5 5 HELIX 14 AB5 SER A 235 SER A 247 1 13 HELIX 15 AB6 ASP A 260 ILE A 270 1 11 HELIX 16 AB7 THR A 312 ILE A 319 1 8 HELIX 17 AB8 PRO A 326 ILE A 336 1 11 HELIX 18 AB9 LYS A 351 GLY A 357 5 7 HELIX 19 AC1 ALA A 392 GLN A 399 1 8 HELIX 20 AC2 ASP A 402 HIS A 418 1 17 HELIX 21 AC3 PRO A 421 LEU A 428 1 8 HELIX 22 AC4 ASN A 437 ASP A 439 5 3 HELIX 23 AC5 TYR A 452 ALA A 463 1 12 HELIX 24 AC6 GLY A 472 GLY A 476 5 5 HELIX 25 AC7 TRP A 481 SER A 500 1 20 HELIX 26 AC8 LEU B 26 GLN B 31 1 6 HELIX 27 AC9 ASP B 34 GLY B 45 1 12 HELIX 28 AD1 GLY B 61 GLY B 73 1 13 HELIX 29 AD2 HIS B 114 PHE B 124 1 11 HELIX 30 AD3 VAL B 149 ASP B 155 1 7 HELIX 31 AD4 PRO B 156 LYS B 160 5 5 HELIX 32 AD5 LYS B 164 GLU B 168 5 5 HELIX 33 AD6 SER B 171 SER B 179 1 9 HELIX 34 AD7 LEU B 180 THR B 190 1 11 HELIX 35 AD8 ASN B 191 SER B 201 1 11 HELIX 36 AD9 SER B 203 GLU B 211 1 9 HELIX 37 AE1 SER B 215 LEU B 226 1 12 HELIX 38 AE2 GLU B 228 TYR B 232 5 5 HELIX 39 AE3 SER B 235 SER B 247 1 13 HELIX 40 AE4 ASP B 260 ILE B 270 1 11 HELIX 41 AE5 THR B 312 ARG B 318 1 7 HELIX 42 AE6 PRO B 326 ILE B 336 1 11 HELIX 43 AE7 LYS B 351 GLY B 357 5 7 HELIX 44 AE8 ALA B 392 ALA B 400 1 9 HELIX 45 AE9 ASP B 402 ASP B 419 1 18 HELIX 46 AF1 PRO B 421 LEU B 428 1 8 HELIX 47 AF2 ASN B 437 ASP B 439 5 3 HELIX 48 AF3 TYR B 452 ALA B 463 1 12 HELIX 49 AF4 GLY B 472 GLY B 476 5 5 HELIX 50 AF5 TRP B 481 SER B 500 1 20 SHEET 1 AA1 5 VAL A 274 HIS A 275 0 SHEET 2 AA1 5 LYS A 77 LEU A 81 1 N LEU A 80 O HIS A 275 SHEET 3 AA1 5 HIS A 54 VAL A 58 1 N VAL A 55 O LYS A 77 SHEET 4 AA1 5 TYR A 306 VAL A 309 1 O ILE A 308 N VAL A 56 SHEET 5 AA1 5 ILE A 468 PHE A 470 1 O HIS A 469 N VAL A 307 SHEET 1 AA2 2 THR A 93 ASN A 96 0 SHEET 2 AA2 2 TRP A 101 ASN A 104 -1 O TRP A 101 N ASN A 96 SHEET 1 AA3 3 LEU A 110 PRO A 111 0 SHEET 2 AA3 3 PHE A 252 ILE A 255 -1 O ASP A 253 N LEU A 110 SHEET 3 AA3 3 LEU A 128 PHE A 131 -1 N ASN A 129 O GLU A 254 SHEET 1 AA4 7 ILE A 145 ARG A 148 0 SHEET 2 AA4 7 TRP A 139 ILE A 142 -1 N TYR A 140 O LYS A 147 SHEET 3 AA4 7 LYS A 362 THR A 365 1 O THR A 364 N TYR A 141 SHEET 4 AA4 7 PHE A 371 HIS A 373 -1 O ILE A 372 N SER A 363 SHEET 5 AA4 7 GLY A 384 LEU A 391 -1 O MET A 387 N HIS A 373 SHEET 6 AA4 7 ALA A 341 CYS A 348 -1 N LEU A 346 O ILE A 386 SHEET 7 AA4 7 CYS A 429 LYS A 435 -1 O TYR A 430 N THR A 347 SHEET 1 AA5 4 LYS A 299 ALA A 304 0 SHEET 2 AA5 4 VAL A 290 GLN A 295 -1 N VAL A 290 O ALA A 304 SHEET 3 AA5 4 ARG A 279 TYR A 285 -1 N GLN A 284 O ARG A 291 SHEET 4 AA5 4 TYR A 320 GLU A 322 1 O TYR A 320 N ILE A 281 SHEET 1 AA6 2 TYR A 338 ARG A 339 0 SHEET 2 AA6 2 ILE A 446 THR A 447 -1 O ILE A 446 N ARG A 339 SHEET 1 AA7 5 VAL B 274 HIS B 275 0 SHEET 2 AA7 5 LYS B 77 LEU B 81 1 N LEU B 80 O HIS B 275 SHEET 3 AA7 5 HIS B 54 VAL B 58 1 N VAL B 57 O THR B 79 SHEET 4 AA7 5 TYR B 306 VAL B 309 1 O ILE B 308 N VAL B 56 SHEET 5 AA7 5 ILE B 468 PHE B 470 1 O HIS B 469 N VAL B 307 SHEET 1 AA8 2 THR B 93 ASN B 96 0 SHEET 2 AA8 2 TRP B 101 ASN B 104 -1 O TRP B 101 N ASN B 96 SHEET 1 AA9 3 LEU B 110 PRO B 111 0 SHEET 2 AA9 3 PHE B 252 ILE B 255 -1 O ASP B 253 N LEU B 110 SHEET 3 AA9 3 LEU B 128 PHE B 131 -1 N ASN B 129 O GLU B 254 SHEET 1 AB1 7 ILE B 145 ARG B 148 0 SHEET 2 AB1 7 TRP B 139 ILE B 142 -1 N TYR B 140 O LYS B 147 SHEET 3 AB1 7 LYS B 362 THR B 365 1 O THR B 364 N TYR B 141 SHEET 4 AB1 7 PHE B 371 HIS B 373 -1 O ILE B 372 N SER B 363 SHEET 5 AB1 7 GLY B 384 LEU B 391 -1 O MET B 387 N HIS B 373 SHEET 6 AB1 7 ALA B 341 CYS B 348 -1 N CYS B 348 O GLY B 384 SHEET 7 AB1 7 CYS B 429 LYS B 435 -1 O SER B 432 N PHE B 345 SHEET 1 AB2 4 LYS B 299 ALA B 304 0 SHEET 2 AB2 4 VAL B 290 GLN B 295 -1 N TYR B 294 O THR B 300 SHEET 3 AB2 4 ARG B 279 TYR B 285 -1 N LYS B 282 O THR B 293 SHEET 4 AB2 4 TYR B 320 GLU B 322 1 O TYR B 320 N ILE B 283 SHEET 1 AB3 2 TYR B 338 ARG B 339 0 SHEET 2 AB3 2 ILE B 446 THR B 447 -1 O ILE B 446 N ARG B 339 SSBOND 1 CYS A 29 CYS A 192 1555 1555 2.08 SSBOND 2 CYS A 348 CYS A 429 1555 1555 2.05 SSBOND 3 CYS B 29 CYS B 192 1555 1555 2.07 SSBOND 4 CYS B 348 CYS B 429 1555 1555 2.07 LINK ND2 ASN A 191 C1 NAG A 601 1555 1555 1.44 LINK ND2 ASN A 213 C1 NAG A 603 1555 1555 1.44 LINK ND2 ASN A 378 C1 NAG A 602 1555 1555 2.06 LINK ND2 ASN B 191 C1 NAG B 601 1555 1555 1.44 CISPEP 1 THR A 296 PRO A 297 0 -3.74 CISPEP 2 GLU A 322 PRO A 323 0 4.06 CISPEP 3 THR B 296 PRO B 297 0 -5.37 CISPEP 4 GLU B 322 PRO B 323 0 2.36 CRYST1 104.836 104.836 214.270 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009539 0.005507 0.000000 0.00000 SCALE2 0.000000 0.011014 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004667 0.00000