HEADER HYDROLASE 08-JAN-18 5Z3I TITLE CRYSTAL STRUCTURE OF ABRIN A CHAIN (RECOMBINANT) IN COMPLEX WITH TITLE 2 ADENINE AT 1.65 ANGSTROMS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABRIN A-CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ABRUS PRECATORIUS; SOURCE 3 ORGANISM_COMMON: INDIAN LICORICE; SOURCE 4 ORGANISM_TAXID: 3816; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RIBOSOME INACTIVATING PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.BANSIA,A.A.KARANDE,S.RAMAKUMAR REVDAT 3 22-NOV-23 5Z3I 1 REMARK REVDAT 2 20-MAR-19 5Z3I 1 JRNL REVDAT 1 02-JAN-19 5Z3I 0 JRNL AUTH H.BANSIA,S.BAGARIA,A.A.KARANDE,S.RAMAKUMAR JRNL TITL STRUCTURAL BASIS FOR NEUTRALIZATION OF CYTOTOXIC ABRIN BY JRNL TITL 2 MONOCLONAL ANTIBODY D6F10. JRNL REF FEBS J. V. 286 1003 2019 JRNL REFN ISSN 1742-4658 JRNL PMID 30521151 JRNL DOI 10.1111/FEBS.14716 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31026 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1476 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.9525 - 3.6688 0.99 2817 149 0.1589 0.1773 REMARK 3 2 3.6688 - 2.9123 1.00 2737 149 0.1704 0.1678 REMARK 3 3 2.9123 - 2.5442 1.00 2687 153 0.1744 0.2021 REMARK 3 4 2.5442 - 2.3116 1.00 2676 134 0.1660 0.1707 REMARK 3 5 2.3116 - 2.1459 1.00 2680 141 0.1761 0.2065 REMARK 3 6 2.1459 - 2.0194 1.00 2679 122 0.1779 0.2390 REMARK 3 7 2.0194 - 1.9183 1.00 2636 134 0.1937 0.2197 REMARK 3 8 1.9183 - 1.8348 1.00 2671 122 0.2049 0.2410 REMARK 3 9 1.8348 - 1.7641 1.00 2672 114 0.2216 0.2629 REMARK 3 10 1.7641 - 1.7033 1.00 2654 125 0.2574 0.2955 REMARK 3 11 1.7033 - 1.6500 1.00 2641 133 0.2702 0.3463 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1957 REMARK 3 ANGLE : 0.652 2672 REMARK 3 CHIRALITY : 0.047 308 REMARK 3 PLANARITY : 0.004 351 REMARK 3 DIHEDRAL : 14.234 1170 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.4758 77.0385 21.9382 REMARK 3 T TENSOR REMARK 3 T11: 0.2423 T22: 0.2093 REMARK 3 T33: 0.2161 T12: -0.0192 REMARK 3 T13: -0.0303 T23: 0.0880 REMARK 3 L TENSOR REMARK 3 L11: 6.6592 L22: 3.1873 REMARK 3 L33: 4.0489 L12: 0.1904 REMARK 3 L13: 2.6842 L23: -0.6561 REMARK 3 S TENSOR REMARK 3 S11: 0.4568 S12: -0.5437 S13: -0.4725 REMARK 3 S21: 0.4592 S22: -0.1505 S23: -0.0155 REMARK 3 S31: 0.2404 S32: -0.1862 S33: -0.2609 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.1051 87.0138 18.3846 REMARK 3 T TENSOR REMARK 3 T11: 0.1645 T22: 0.2132 REMARK 3 T33: 0.1148 T12: 0.0104 REMARK 3 T13: 0.0300 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 5.3359 L22: 4.3459 REMARK 3 L33: 1.2884 L12: 2.0147 REMARK 3 L13: 0.9280 L23: 0.1338 REMARK 3 S TENSOR REMARK 3 S11: 0.0432 S12: -0.2738 S13: 0.3017 REMARK 3 S21: 0.1943 S22: 0.0609 S23: 0.2614 REMARK 3 S31: 0.0204 S32: -0.2189 S33: -0.0965 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.3304 97.9354 12.8843 REMARK 3 T TENSOR REMARK 3 T11: 0.2019 T22: 0.1972 REMARK 3 T33: 0.2433 T12: 0.0051 REMARK 3 T13: -0.0251 T23: 0.0637 REMARK 3 L TENSOR REMARK 3 L11: 4.0912 L22: 4.9340 REMARK 3 L33: 3.3166 L12: -0.8205 REMARK 3 L13: -1.6110 L23: 1.7106 REMARK 3 S TENSOR REMARK 3 S11: 0.0642 S12: 0.4086 S13: 0.5966 REMARK 3 S21: -0.2626 S22: -0.0639 S23: 0.1894 REMARK 3 S31: -0.2718 S32: -0.2310 S33: -0.0523 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.8609 89.5020 12.8989 REMARK 3 T TENSOR REMARK 3 T11: 0.1495 T22: 0.2386 REMARK 3 T33: 0.3256 T12: -0.0327 REMARK 3 T13: -0.0065 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 4.3620 L22: 4.9782 REMARK 3 L33: 7.8137 L12: 0.7542 REMARK 3 L13: 0.9168 L23: 1.2075 REMARK 3 S TENSOR REMARK 3 S11: -0.0714 S12: 0.1577 S13: 0.1174 REMARK 3 S21: -0.0421 S22: 0.0070 S23: -0.4421 REMARK 3 S31: -0.2641 S32: 0.2340 S33: 0.0680 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9271 80.1040 11.4994 REMARK 3 T TENSOR REMARK 3 T11: 0.1573 T22: 0.1858 REMARK 3 T33: 0.2363 T12: -0.0030 REMARK 3 T13: 0.0079 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 4.7417 L22: 4.4431 REMARK 3 L33: 3.4195 L12: -0.2831 REMARK 3 L13: 0.7153 L23: -0.3406 REMARK 3 S TENSOR REMARK 3 S11: -0.0176 S12: 0.2352 S13: -0.4564 REMARK 3 S21: -0.0338 S22: -0.0424 S23: -0.5890 REMARK 3 S31: 0.1620 S32: 0.2504 S33: 0.0689 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.1977 77.1639 1.7576 REMARK 3 T TENSOR REMARK 3 T11: 0.3825 T22: 0.3765 REMARK 3 T33: 0.1833 T12: -0.1182 REMARK 3 T13: -0.0745 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 2.8232 L22: 4.6626 REMARK 3 L33: 1.7475 L12: 2.3375 REMARK 3 L13: 1.1702 L23: 1.2829 REMARK 3 S TENSOR REMARK 3 S11: -0.1471 S12: 0.7388 S13: -0.1740 REMARK 3 S21: -0.9111 S22: 0.4697 S23: 0.2137 REMARK 3 S31: 0.2125 S32: -0.1537 S33: -0.2681 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.5772 70.2204 -3.8527 REMARK 3 T TENSOR REMARK 3 T11: 0.8488 T22: 0.7627 REMARK 3 T33: 0.4145 T12: -0.1669 REMARK 3 T13: -0.1268 T23: -0.2339 REMARK 3 L TENSOR REMARK 3 L11: 0.8565 L22: 3.6223 REMARK 3 L33: 1.8236 L12: -1.0453 REMARK 3 L13: -0.1181 L23: -0.9649 REMARK 3 S TENSOR REMARK 3 S11: 0.3561 S12: 0.2304 S13: -0.6498 REMARK 3 S21: -1.0282 S22: 0.4259 S23: -0.0241 REMARK 3 S31: 0.8955 S32: 0.3174 S33: -0.7019 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 226 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.4712 71.6780 3.4832 REMARK 3 T TENSOR REMARK 3 T11: 0.4148 T22: 0.4173 REMARK 3 T33: 0.3920 T12: -0.1452 REMARK 3 T13: -0.0755 T23: -0.0625 REMARK 3 L TENSOR REMARK 3 L11: 2.2970 L22: 4.7718 REMARK 3 L33: 5.8074 L12: 0.6263 REMARK 3 L13: -1.6612 L23: 0.0679 REMARK 3 S TENSOR REMARK 3 S11: -0.1738 S12: 0.7415 S13: -0.8696 REMARK 3 S21: -0.6952 S22: 0.1694 S23: 0.2537 REMARK 3 S31: 0.6427 S32: -0.6280 S33: 0.0794 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Z3I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006418. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31092 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 41.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.60500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ABR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.2M MAGNESIUM CHLORIDE, REMARK 280 TRIS PH 6.5, MICROBATCH, TEMPERATURE 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.88000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.94000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.94000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.88000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.75000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 GLU A 1 REMARK 465 ASP A 2 REMARK 465 PRO A 250 REMARK 465 ASN A 251 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 3 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 6 CE NZ REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 ARG A 48 NE CZ NH1 NH2 REMARK 470 ARG A 118 NH2 REMARK 470 GLN A 180 OE1 NE2 REMARK 470 ASP A 199 OD1 OD2 REMARK 470 VAL A 209 CG1 CG2 REMARK 470 GLN A 210 CG CD OE1 NE2 REMARK 470 ASP A 211 CG OD1 OD2 REMARK 470 GLN A 216 CG CD OE1 NE2 REMARK 470 ILE A 222 CG1 CG2 CD1 REMARK 470 ARG A 223 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 224 CG OD1 ND2 REMARK 470 VAL A 227 CG1 CG2 REMARK 470 ILE A 228 CG1 CG2 CD1 REMARK 470 ASP A 230 CG OD1 OD2 REMARK 470 SER A 233 OG REMARK 470 PRO A 235 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 59 -179.55 -171.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADE A 301 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE CONFLICT (Y85H) IS DUE TO AN ISOFORM OF REMARK 999 Q7DM12 (ABRIN-A), BUT THE ISOFORM HAS NOT BEEN REPORTED IN THE REMARK 999 UNIPROT DB. FOR REFERENCE : HUNG, C. H., LEE, M. C., LEE, T. C. & REMARK 999 AMP; LIN, J. Y. (1993) PRIMARY STRUCTURE OF THREE DISTINCT REMARK 999 ISOABRINS DETERMINED BY CDNA SEQUENCING : CONSERVATION AND REMARK 999 SIGNIFICANCE, J. MOL. BIOL. 229,263 - 267 DBREF 5Z3I A 1 251 UNP Q7DM12 Q7DM12_ABRPR 1 251 SEQADV 5Z3I MET A -13 UNP Q7DM12 INITIATING METHIONINE SEQADV 5Z3I ARG A -12 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I GLY A -11 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I SER A -10 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I HIS A -9 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I HIS A -8 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I HIS A -7 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I HIS A -6 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I HIS A -5 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I HIS A -4 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I GLY A -3 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I MET A -2 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I ALA A -1 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I SER A 0 UNP Q7DM12 EXPRESSION TAG SEQADV 5Z3I HIS A 85 UNP Q7DM12 TYR 85 SEE SEQUENCE DETAILS SEQRES 1 A 265 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 265 SER GLU ASP ARG PRO ILE LYS PHE SER THR GLU GLY ALA SEQRES 3 A 265 THR SER GLN SER TYR LYS GLN PHE ILE GLU ALA LEU ARG SEQRES 4 A 265 GLU ARG LEU ARG GLY GLY LEU ILE HIS ASP ILE PRO VAL SEQRES 5 A 265 LEU PRO ASP PRO THR THR LEU GLN GLU ARG ASN ARG TYR SEQRES 6 A 265 ILE THR VAL GLU LEU SER ASN SER ASP THR GLU SER ILE SEQRES 7 A 265 GLU VAL GLY ILE ASP VAL THR ASN ALA TYR VAL VAL ALA SEQRES 8 A 265 TYR ARG ALA GLY THR GLN SER HIS PHE LEU ARG ASP ALA SEQRES 9 A 265 PRO SER SER ALA SER ASP TYR LEU PHE THR GLY THR ASP SEQRES 10 A 265 GLN HIS SER LEU PRO PHE TYR GLY THR TYR GLY ASP LEU SEQRES 11 A 265 GLU ARG TRP ALA HIS GLN SER ARG GLN GLN ILE PRO LEU SEQRES 12 A 265 GLY LEU GLN ALA LEU THR HIS GLY ILE SER PHE PHE ARG SEQRES 13 A 265 SER GLY GLY ASN ASP ASN GLU GLU LYS ALA ARG THR LEU SEQRES 14 A 265 ILE VAL ILE ILE GLN MET VAL ALA GLU ALA ALA ARG PHE SEQRES 15 A 265 ARG TYR ILE SER ASN ARG VAL ARG VAL SER ILE GLN THR SEQRES 16 A 265 GLY THR ALA PHE GLN PRO ASP ALA ALA MET ILE SER LEU SEQRES 17 A 265 GLU ASN ASN TRP ASP ASN LEU SER ARG GLY VAL GLN GLU SEQRES 18 A 265 SER VAL GLN ASP THR PHE PRO ASN GLN VAL THR LEU THR SEQRES 19 A 265 ASN ILE ARG ASN GLU PRO VAL ILE VAL ASP SER LEU SER SEQRES 20 A 265 HIS PRO THR VAL ALA VAL LEU ALA LEU MET LEU PHE VAL SEQRES 21 A 265 CYS ASN PRO PRO ASN HET ADE A 301 10 HETNAM ADE ADENINE FORMUL 2 ADE C5 H5 N5 FORMUL 3 HOH *159(H2 O) HELIX 1 AA1 THR A 13 ARG A 29 1 17 HELIX 2 AA2 ASP A 41 LEU A 45 5 5 HELIX 3 AA3 GLN A 46 ASN A 49 5 4 HELIX 4 AA4 SER A 93 LEU A 98 1 6 HELIX 5 AA5 THR A 112 HIS A 121 1 10 HELIX 6 AA6 SER A 123 ILE A 127 5 5 HELIX 7 AA7 GLY A 130 GLY A 144 1 15 HELIX 8 AA8 ASP A 147 PHE A 168 1 22 HELIX 9 AA9 PHE A 168 GLY A 182 1 15 HELIX 10 AB1 ASP A 188 ASN A 197 1 10 HELIX 11 AB2 ASN A 197 SER A 208 1 12 HELIX 12 AB3 HIS A 234 LEU A 240 5 7 SHEET 1 AA1 6 ILE A 5 SER A 8 0 SHEET 2 AA1 6 TYR A 51 SER A 57 1 O GLU A 55 N PHE A 7 SHEET 3 AA1 6 SER A 63 ASP A 69 -1 O ILE A 68 N ILE A 52 SHEET 4 AA1 6 VAL A 75 ALA A 80 -1 O ALA A 77 N GLY A 67 SHEET 5 AA1 6 GLN A 83 PHE A 86 -1 O GLN A 83 N ALA A 80 SHEET 6 AA1 6 ASP A 103 SER A 106 1 O HIS A 105 N PHE A 86 SHEET 1 AA2 2 GLY A 31 ILE A 33 0 SHEET 2 AA2 2 ILE A 36 VAL A 38 -1 O VAL A 38 N GLY A 31 SHEET 1 AA3 2 THR A 212 THR A 220 0 SHEET 2 AA3 2 PRO A 226 SER A 231 -1 O ASP A 230 N PHE A 213 SITE 1 AC1 9 ALA A 73 TYR A 74 VAL A 75 GLY A 111 SITE 2 AC1 9 TYR A 113 ILE A 159 ALA A 163 ARG A 167 SITE 3 AC1 9 HOH A 456 CRYST1 41.760 73.500 81.880 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023946 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013605 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012213 0.00000