HEADER HYDROLASE 26-JAN-18 5Z70 TITLE CRYSTAL STRUCTURE OF OLEATE HYDRATASE FROM STENOTROPHOMONAS SP. KCTC TITLE 2 12332 COMPND MOL_ID: 1; COMPND 2 MOLECULE: OLEATE HYDRATASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS SP. KCTC 12332; SOURCE 3 ORGANISM_TAXID: 1793721; SOURCE 4 GENE: AXG53_12705; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OLEATE HYDRATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.PARK REVDAT 3 22-NOV-23 5Z70 1 REMARK REVDAT 2 28-AUG-19 5Z70 1 TITLE REVDAT 1 05-SEP-18 5Z70 0 JRNL AUTH A.K.PARK,G.H.LEE,D.W.KIM,E.H.JANG,H.T.KWON,Y.M.CHI JRNL TITL CRYSTAL STRUCTURE OF OLEATE HYDRATASE FROM STENOTROPHOMONAS JRNL TITL 2 SP. KCTC 12332 REVEALS CONFORMATIONAL PLASTICITY SURROUNDING JRNL TITL 3 THE FAD BINDING SITE. JRNL REF BIOCHEM. BIOPHYS. RES. V. 499 772 2018 JRNL REF 2 COMMUN. JRNL REFN ESSN 1090-2104 JRNL PMID 29608896 JRNL DOI 10.1016/J.BBRC.2018.03.220 REMARK 2 REMARK 2 RESOLUTION. 2.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 28761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.8298 - 6.4596 0.98 2572 153 0.2040 0.2381 REMARK 3 2 6.4596 - 5.1320 1.00 2521 140 0.2252 0.2931 REMARK 3 3 5.1320 - 4.4847 1.00 2523 133 0.2005 0.2507 REMARK 3 4 4.4847 - 4.0753 1.00 2490 128 0.1948 0.2606 REMARK 3 5 4.0753 - 3.7835 1.00 2467 161 0.2225 0.2907 REMARK 3 6 3.7835 - 3.5607 1.00 2460 137 0.2366 0.3409 REMARK 3 7 3.5607 - 3.3825 1.00 2465 138 0.2474 0.3146 REMARK 3 8 3.3825 - 3.2354 1.00 2459 134 0.2719 0.4148 REMARK 3 9 3.2354 - 3.1109 1.00 2466 113 0.2957 0.3459 REMARK 3 10 3.1109 - 3.0036 1.00 2452 132 0.3027 0.3963 REMARK 3 11 3.0036 - 2.9097 0.97 2372 145 0.3200 0.3797 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 8807 REMARK 3 ANGLE : 0.852 11957 REMARK 3 CHIRALITY : 0.046 1306 REMARK 3 PLANARITY : 0.007 1544 REMARK 3 DIHEDRAL : 18.152 3212 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Z70 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006592. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28812 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : 0.25700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.00 REMARK 200 R MERGE FOR SHELL (I) : 3.15100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4UIR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS PROPANE, POTASSIUM REMARK 280 THIOCYANATE, PEG 3350, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.18600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.18600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.03050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 117.62600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.03050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 117.62600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 88.18600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.03050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 117.62600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 88.18600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.03050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 117.62600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 88.18600 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 62.06100 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 88.18600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 49 REMARK 465 VAL A 50 REMARK 465 THR A 339 REMARK 465 ARG A 340 REMARK 465 ALA A 341 REMARK 465 THR A 342 REMARK 465 THR A 343 REMARK 465 PRO A 344 REMARK 465 PRO A 345 REMARK 465 GLY A 346 REMARK 465 ASP A 347 REMARK 465 ARG A 558 REMARK 465 LYS A 559 REMARK 465 GLN A 560 REMARK 465 VAL A 561 REMARK 465 ALA A 562 REMARK 465 ASP A 563 REMARK 465 ILE A 564 REMARK 465 SER A 565 REMARK 465 ALA A 611 REMARK 465 GLY A 612 REMARK 465 ASP A 613 REMARK 465 GLY A 614 REMARK 465 GLY A 615 REMARK 465 SER A 616 REMARK 465 SER A 617 REMARK 465 ASP A 618 REMARK 465 GLN A 619 REMARK 465 ALA A 620 REMARK 465 ALA A 621 REMARK 465 SER A 622 REMARK 465 SER A 623 REMARK 465 ARG A 624 REMARK 465 MET A 625 REMARK 465 LYS A 626 REMARK 465 ALA A 627 REMARK 465 ASN A 628 REMARK 465 HIS A 629 REMARK 465 THR A 630 REMARK 465 ALA A 631 REMARK 465 ALA A 632 REMARK 465 ALA A 633 REMARK 465 ALA A 634 REMARK 465 LEU A 635 REMARK 465 GLY A 636 REMARK 465 ALA A 637 REMARK 465 VAL A 638 REMARK 465 SER A 639 REMARK 465 ASP A 640 REMARK 465 TRP A 641 REMARK 465 ILE A 642 REMARK 465 HIS A 643 REMARK 465 HIS A 644 REMARK 465 VAL A 645 REMARK 465 ARG A 646 REMARK 465 ASP A 647 REMARK 465 LYS A 648 REMARK 465 LEU A 649 REMARK 465 LYS A 650 REMARK 465 PRO A 651 REMARK 465 GLY A 652 REMARK 465 ALA A 653 REMARK 465 THR B 90 REMARK 465 PRO B 91 REMARK 465 GLY B 92 REMARK 465 GLY B 93 REMARK 465 SER B 94 REMARK 465 LEU B 95 REMARK 465 ASP B 96 REMARK 465 THR B 339 REMARK 465 ARG B 340 REMARK 465 ALA B 341 REMARK 465 THR B 342 REMARK 465 ARG B 558 REMARK 465 LYS B 559 REMARK 465 GLN B 560 REMARK 465 VAL B 561 REMARK 465 ALA B 562 REMARK 465 ASP B 563 REMARK 465 ILE B 564 REMARK 465 SER B 565 REMARK 465 PRO B 566 REMARK 465 THR B 567 REMARK 465 GLN B 568 REMARK 465 LEU B 609 REMARK 465 PRO B 610 REMARK 465 ALA B 611 REMARK 465 GLY B 612 REMARK 465 ASP B 613 REMARK 465 GLY B 614 REMARK 465 GLY B 615 REMARK 465 SER B 616 REMARK 465 SER B 617 REMARK 465 ASP B 618 REMARK 465 GLN B 619 REMARK 465 ALA B 620 REMARK 465 ALA B 621 REMARK 465 SER B 622 REMARK 465 SER B 623 REMARK 465 ARG B 624 REMARK 465 MET B 625 REMARK 465 LYS B 626 REMARK 465 ALA B 627 REMARK 465 ASN B 628 REMARK 465 HIS B 629 REMARK 465 THR B 630 REMARK 465 ALA B 631 REMARK 465 ALA B 632 REMARK 465 ALA B 633 REMARK 465 ALA B 634 REMARK 465 LEU B 635 REMARK 465 GLY B 636 REMARK 465 ALA B 637 REMARK 465 VAL B 638 REMARK 465 SER B 639 REMARK 465 ASP B 640 REMARK 465 TRP B 641 REMARK 465 ILE B 642 REMARK 465 HIS B 643 REMARK 465 HIS B 644 REMARK 465 VAL B 645 REMARK 465 ARG B 646 REMARK 465 ASP B 647 REMARK 465 LYS B 648 REMARK 465 LEU B 649 REMARK 465 LYS B 650 REMARK 465 PRO B 651 REMARK 465 GLY B 652 REMARK 465 ALA B 653 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 234 OE2 GLU A 541 2.08 REMARK 500 NZ LYS A 300 OD1 ASP A 305 2.11 REMARK 500 O GLY B 104 OG1 THR B 385 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 90 -64.20 -145.50 REMARK 500 PRO A 91 -95.00 -131.59 REMARK 500 SER A 98 34.97 -166.55 REMARK 500 TYR A 105 149.52 68.01 REMARK 500 ARG A 108 -54.10 -13.74 REMARK 500 ARG A 111 98.22 59.74 REMARK 500 ASN A 116 77.94 -102.08 REMARK 500 PRO A 135 47.00 -97.45 REMARK 500 SER A 173 -88.14 -79.51 REMARK 500 SER A 174 -41.58 -158.10 REMARK 500 ASP A 193 -0.41 62.96 REMARK 500 ALA A 218 71.64 48.84 REMARK 500 TYR A 253 -122.02 -105.04 REMARK 500 GLU A 325 -75.18 -58.34 REMARK 500 TYR A 329 55.66 -104.83 REMARK 500 ASP A 331 -141.17 -155.95 REMARK 500 ALA A 335 161.49 117.60 REMARK 500 ASP A 337 -40.37 -139.86 REMARK 500 ASN A 401 -151.05 -130.55 REMARK 500 VAL A 409 -76.60 -117.70 REMARK 500 LEU A 458 46.86 -78.76 REMARK 500 ASN A 522 15.93 -142.95 REMARK 500 THR A 532 -123.77 -105.48 REMARK 500 LEU A 555 -112.55 -99.96 REMARK 500 ASN A 584 -9.01 72.88 REMARK 500 MET A 588 -73.39 -59.00 REMARK 500 VAL B 50 152.86 67.73 REMARK 500 VAL B 88 155.61 86.91 REMARK 500 ASN B 100 154.39 61.34 REMARK 500 ALA B 101 -174.49 51.76 REMARK 500 ASP B 103 -57.63 -18.75 REMARK 500 TYR B 105 145.18 65.59 REMARK 500 ARG B 108 -59.48 -1.48 REMARK 500 TYR B 117 -98.14 -88.31 REMARK 500 ASP B 118 -51.49 59.25 REMARK 500 PRO B 135 44.34 -99.43 REMARK 500 ASP B 193 -1.00 62.19 REMARK 500 ALA B 218 72.44 48.71 REMARK 500 TYR B 253 -127.99 -102.83 REMARK 500 ASN B 265 48.69 -54.25 REMARK 500 TYR B 266 -43.96 -169.20 REMARK 500 PHE B 276 -179.70 -65.13 REMARK 500 ALA B 312 -37.36 58.36 REMARK 500 ASP B 331 -146.82 -156.23 REMARK 500 PRO B 345 -144.83 -65.74 REMARK 500 ASN B 401 -149.78 -130.32 REMARK 500 VAL B 409 -81.63 -116.78 REMARK 500 LEU B 458 42.01 -77.85 REMARK 500 ASN B 522 17.00 -143.41 REMARK 500 THR B 532 -123.14 -102.96 REMARK 500 REMARK 500 THIS ENTRY HAS 55 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 51 GLY A 52 142.11 REMARK 500 GLN B 430 PRO B 431 120.35 REMARK 500 REMARK 500 REMARK: NULL DBREF1 5Z70 A 49 653 UNP A0A126NKL7_9GAMM DBREF2 5Z70 A A0A126NKL7 49 653 DBREF1 5Z70 B 49 653 UNP A0A126NKL7_9GAMM DBREF2 5Z70 B A0A126NKL7 49 653 SEQRES 1 A 605 GLN VAL GLU GLY ARG LYS ALA TRP ILE ILE GLY SER GLY SEQRES 2 A 605 ILE ALA GLY LEU ALA SER ALA PHE TYR LEU ILE ARG ASP SEQRES 3 A 605 GLY ARG MET LYS GLY GLN ASP ILE THR ILE LEU ASP ALA SEQRES 4 A 605 VAL GLY THR PRO GLY GLY SER LEU ASP GLY SER GLY ASN SEQRES 5 A 605 ALA GLU ASP GLY TYR LEU ILE ARG GLY GLY ARG GLU MET SEQRES 6 A 605 ASN TRP ASN TYR ASP HIS PHE TRP ASP LEU PHE GLN ASP SEQRES 7 A 605 ILE PRO ALA LEU GLU TYR PRO SER PRO TYR SER VAL LEU SEQRES 8 A 605 ASP GLU TYR ARG ALA VAL ASN ASP ASN ASP PRO ASN TRP SEQRES 9 A 605 SER LYS SER ARG LEU MET HIS LYS GLN GLY GLN ILE ARG SEQRES 10 A 605 ASP PHE SER THR LEU GLY LEU SER SER ALA HIS GLN TRP SEQRES 11 A 605 GLU LEU ILE LYS LEU LEU LEU LYS ARG LYS GLU ASP LEU SEQRES 12 A 605 ASP ASP ILE THR ILE GLU GLN TYR PHE SER ASP SER PHE SEQRES 13 A 605 LEU GLU THR ASN PHE TRP TYR LEU TRP ARG SER MET PHE SEQRES 14 A 605 ALA PHE GLN ASN TRP GLN SER LEU LEU GLU VAL LYS LEU SEQRES 15 A 605 TYR MET HIS ARG PHE LEU ASP ALA ILE ASP GLY LEU THR SEQRES 16 A 605 ASP MET SER ALA LEU VAL PHE PRO LYS TYR ASN GLN TYR SEQRES 17 A 605 ASP SER PHE VAL VAL PRO LEU VAL ASN TYR LEU LYS GLY SEQRES 18 A 605 GLN GLY VAL ASN VAL GLU PHE GLY THR ARG VAL TYR ASP SEQRES 19 A 605 LEU ASP MET THR ASP ASN ASN GLY GLU ARG THR VAL THR SEQRES 20 A 605 SER ILE LEU ALA LYS VAL ASP GLY ARG ASP GLN LYS ILE SEQRES 21 A 605 ASP ILE GLY ALA LYS ASP VAL VAL PHE ALA LEU THR GLY SEQRES 22 A 605 SER MET THR GLU GLY THR ALA TYR GLY ASP LEU ASP THR SEQRES 23 A 605 ALA PRO ASP LEU THR ARG ALA THR THR PRO PRO GLY ASP SEQRES 24 A 605 SER SER ASP TRP ALA LEU TRP GLN ASN LEU ALA LYS LYS SEQRES 25 A 605 SER HIS VAL PHE GLY LYS PRO GLU LYS PHE CYS GLY GLN SEQRES 26 A 605 PRO SER ARG SER MET TRP GLU SER ALA THR LEU THR CYS SEQRES 27 A 605 LYS PRO SER PRO LEU THR GLU ARG LEU LYS ASP LEU SER SEQRES 28 A 605 ILE ASN ASP PRO TYR SER GLY LYS THR VAL THR GLY GLY SEQRES 29 A 605 ILE ILE THR PHE THR ASP SER ASN TRP VAL LEU SER PHE SEQRES 30 A 605 THR CYS ASN ARG GLN PRO HIS PHE PRO THR GLN PRO ASP SEQRES 31 A 605 ASP VAL LEU VAL LEU TRP VAL TYR ALA LEU VAL MET ASP SEQRES 32 A 605 SER LYS GLY ASN HIS VAL LEU LYS PRO MET PRO GLU CYS SEQRES 33 A 605 THR GLY ARG GLU ILE LEU ALA GLU LEU CYS TYR HIS LEU SEQRES 34 A 605 GLY ILE VAL ASP GLN VAL ASP GLU VAL ALA ARG GLN THR SEQRES 35 A 605 LYS VAL ARG LEU ALA LEU MET PRO PHE ILE THR ALA GLN SEQRES 36 A 605 PHE MET PRO ARG ALA ALA GLY ASP ARG PRO ARG VAL VAL SEQRES 37 A 605 PRO ALA GLY CYS THR ASN LEU ALA LEU LEU GLY GLN PHE SEQRES 38 A 605 VAL GLU THR SER ASN ASP ILE ILE PHE THR MET GLU SER SEQRES 39 A 605 SER VAL ARG THR ALA ARG ILE GLY VAL TYR THR LEU LEU SEQRES 40 A 605 GLY LEU ARG LYS GLN VAL ALA ASP ILE SER PRO THR GLN SEQRES 41 A 605 TYR ASP VAL ARG ASN LEU ILE LYS GLY ALA ARG ALA LEU SEQRES 42 A 605 ASN ASN ASN GLU PRO PHE MET GLY GLU ARG LEU LEU HIS SEQRES 43 A 605 ARG LEU LEU ASP ASN THR TYR PHE ALA HIS ILE LEU PRO SEQRES 44 A 605 PRO LEU PRO ALA GLY ASP GLY GLY SER SER ASP GLN ALA SEQRES 45 A 605 ALA SER SER ARG MET LYS ALA ASN HIS THR ALA ALA ALA SEQRES 46 A 605 ALA LEU GLY ALA VAL SER ASP TRP ILE HIS HIS VAL ARG SEQRES 47 A 605 ASP LYS LEU LYS PRO GLY ALA SEQRES 1 B 605 GLN VAL GLU GLY ARG LYS ALA TRP ILE ILE GLY SER GLY SEQRES 2 B 605 ILE ALA GLY LEU ALA SER ALA PHE TYR LEU ILE ARG ASP SEQRES 3 B 605 GLY ARG MET LYS GLY GLN ASP ILE THR ILE LEU ASP ALA SEQRES 4 B 605 VAL GLY THR PRO GLY GLY SER LEU ASP GLY SER GLY ASN SEQRES 5 B 605 ALA GLU ASP GLY TYR LEU ILE ARG GLY GLY ARG GLU MET SEQRES 6 B 605 ASN TRP ASN TYR ASP HIS PHE TRP ASP LEU PHE GLN ASP SEQRES 7 B 605 ILE PRO ALA LEU GLU TYR PRO SER PRO TYR SER VAL LEU SEQRES 8 B 605 ASP GLU TYR ARG ALA VAL ASN ASP ASN ASP PRO ASN TRP SEQRES 9 B 605 SER LYS SER ARG LEU MET HIS LYS GLN GLY GLN ILE ARG SEQRES 10 B 605 ASP PHE SER THR LEU GLY LEU SER SER ALA HIS GLN TRP SEQRES 11 B 605 GLU LEU ILE LYS LEU LEU LEU LYS ARG LYS GLU ASP LEU SEQRES 12 B 605 ASP ASP ILE THR ILE GLU GLN TYR PHE SER ASP SER PHE SEQRES 13 B 605 LEU GLU THR ASN PHE TRP TYR LEU TRP ARG SER MET PHE SEQRES 14 B 605 ALA PHE GLN ASN TRP GLN SER LEU LEU GLU VAL LYS LEU SEQRES 15 B 605 TYR MET HIS ARG PHE LEU ASP ALA ILE ASP GLY LEU THR SEQRES 16 B 605 ASP MET SER ALA LEU VAL PHE PRO LYS TYR ASN GLN TYR SEQRES 17 B 605 ASP SER PHE VAL VAL PRO LEU VAL ASN TYR LEU LYS GLY SEQRES 18 B 605 GLN GLY VAL ASN VAL GLU PHE GLY THR ARG VAL TYR ASP SEQRES 19 B 605 LEU ASP MET THR ASP ASN ASN GLY GLU ARG THR VAL THR SEQRES 20 B 605 SER ILE LEU ALA LYS VAL ASP GLY ARG ASP GLN LYS ILE SEQRES 21 B 605 ASP ILE GLY ALA LYS ASP VAL VAL PHE ALA LEU THR GLY SEQRES 22 B 605 SER MET THR GLU GLY THR ALA TYR GLY ASP LEU ASP THR SEQRES 23 B 605 ALA PRO ASP LEU THR ARG ALA THR THR PRO PRO GLY ASP SEQRES 24 B 605 SER SER ASP TRP ALA LEU TRP GLN ASN LEU ALA LYS LYS SEQRES 25 B 605 SER HIS VAL PHE GLY LYS PRO GLU LYS PHE CYS GLY GLN SEQRES 26 B 605 PRO SER ARG SER MET TRP GLU SER ALA THR LEU THR CYS SEQRES 27 B 605 LYS PRO SER PRO LEU THR GLU ARG LEU LYS ASP LEU SER SEQRES 28 B 605 ILE ASN ASP PRO TYR SER GLY LYS THR VAL THR GLY GLY SEQRES 29 B 605 ILE ILE THR PHE THR ASP SER ASN TRP VAL LEU SER PHE SEQRES 30 B 605 THR CYS ASN ARG GLN PRO HIS PHE PRO THR GLN PRO ASP SEQRES 31 B 605 ASP VAL LEU VAL LEU TRP VAL TYR ALA LEU VAL MET ASP SEQRES 32 B 605 SER LYS GLY ASN HIS VAL LEU LYS PRO MET PRO GLU CYS SEQRES 33 B 605 THR GLY ARG GLU ILE LEU ALA GLU LEU CYS TYR HIS LEU SEQRES 34 B 605 GLY ILE VAL ASP GLN VAL ASP GLU VAL ALA ARG GLN THR SEQRES 35 B 605 LYS VAL ARG LEU ALA LEU MET PRO PHE ILE THR ALA GLN SEQRES 36 B 605 PHE MET PRO ARG ALA ALA GLY ASP ARG PRO ARG VAL VAL SEQRES 37 B 605 PRO ALA GLY CYS THR ASN LEU ALA LEU LEU GLY GLN PHE SEQRES 38 B 605 VAL GLU THR SER ASN ASP ILE ILE PHE THR MET GLU SER SEQRES 39 B 605 SER VAL ARG THR ALA ARG ILE GLY VAL TYR THR LEU LEU SEQRES 40 B 605 GLY LEU ARG LYS GLN VAL ALA ASP ILE SER PRO THR GLN SEQRES 41 B 605 TYR ASP VAL ARG ASN LEU ILE LYS GLY ALA ARG ALA LEU SEQRES 42 B 605 ASN ASN ASN GLU PRO PHE MET GLY GLU ARG LEU LEU HIS SEQRES 43 B 605 ARG LEU LEU ASP ASN THR TYR PHE ALA HIS ILE LEU PRO SEQRES 44 B 605 PRO LEU PRO ALA GLY ASP GLY GLY SER SER ASP GLN ALA SEQRES 45 B 605 ALA SER SER ARG MET LYS ALA ASN HIS THR ALA ALA ALA SEQRES 46 B 605 ALA LEU GLY ALA VAL SER ASP TRP ILE HIS HIS VAL ARG SEQRES 47 B 605 ASP LYS LEU LYS PRO GLY ALA FORMUL 3 HOH *7(H2 O) HELIX 1 AA1 GLY A 61 ASP A 74 1 14 HELIX 2 AA2 LYS A 78 GLN A 80 5 3 HELIX 3 AA3 TYR A 117 GLN A 125 1 9 HELIX 4 AA4 SER A 137 ASP A 149 1 13 HELIX 5 AA5 SER A 174 LYS A 186 1 13 HELIX 6 AA6 ARG A 187 LEU A 191 5 5 HELIX 7 AA7 THR A 195 PHE A 200 1 6 HELIX 8 AA8 SER A 203 GLU A 206 5 4 HELIX 9 AA9 THR A 207 ALA A 218 1 12 HELIX 10 AB1 SER A 224 LEU A 236 1 13 HELIX 11 AB2 ASP A 240 MET A 245 1 6 HELIX 12 AB3 ASN A 254 PHE A 259 1 6 HELIX 13 AB4 PHE A 259 GLY A 269 1 11 HELIX 14 AB5 TRP A 351 SER A 361 1 11 HELIX 15 AB6 HIS A 362 LYS A 366 5 5 HELIX 16 AB7 PRO A 367 GLY A 372 1 6 HELIX 17 AB8 SER A 389 LYS A 396 1 8 HELIX 18 AB9 ASP A 397 SER A 399 5 3 HELIX 19 AC1 ASP A 402 GLY A 406 5 5 HELIX 20 AC2 GLY A 466 GLY A 478 1 13 HELIX 21 AC3 ILE A 479 ASP A 481 5 3 HELIX 22 AC4 GLN A 482 GLN A 489 1 8 HELIX 23 AC5 THR A 501 MET A 505 5 5 HELIX 24 AC6 PHE A 538 LEU A 555 1 18 HELIX 25 AC7 PRO A 566 TYR A 569 5 4 HELIX 26 AC8 ASP A 570 ASN A 582 1 13 HELIX 27 AC9 GLY A 589 ASP A 598 1 10 HELIX 28 AD1 PHE A 602 LEU A 606 5 5 HELIX 29 AD2 GLY B 61 ASP B 74 1 14 HELIX 30 AD3 LYS B 78 GLN B 80 5 3 HELIX 31 AD4 ASP B 118 GLN B 125 1 8 HELIX 32 AD5 SER B 137 ASP B 149 1 13 HELIX 33 AD6 SER B 173 LYS B 186 1 14 HELIX 34 AD7 ARG B 187 LEU B 191 5 5 HELIX 35 AD8 THR B 195 PHE B 200 1 6 HELIX 36 AD9 SER B 203 GLU B 206 5 4 HELIX 37 AE1 THR B 207 ALA B 218 1 12 HELIX 38 AE2 SER B 224 LEU B 236 1 13 HELIX 39 AE3 ASP B 237 ILE B 239 5 3 HELIX 40 AE4 ASP B 240 MET B 245 1 6 HELIX 41 AE5 ASN B 254 PHE B 259 1 6 HELIX 42 AE6 PHE B 259 LYS B 268 1 10 HELIX 43 AE7 GLY B 269 GLY B 271 5 3 HELIX 44 AE8 TRP B 351 SER B 361 1 11 HELIX 45 AE9 HIS B 362 GLY B 365 5 4 HELIX 46 AF1 LYS B 366 PHE B 370 5 5 HELIX 47 AF2 SER B 389 ASP B 397 1 9 HELIX 48 AF3 ASP B 402 GLY B 406 5 5 HELIX 49 AF4 PRO B 460 CYS B 464 5 5 HELIX 50 AF5 THR B 465 GLY B 478 1 14 HELIX 51 AF6 ILE B 479 ASP B 481 5 3 HELIX 52 AF7 GLN B 482 GLN B 489 1 8 HELIX 53 AF8 THR B 501 MET B 505 5 5 HELIX 54 AF9 PHE B 538 LEU B 555 1 18 HELIX 55 AG1 VAL B 571 ASN B 582 1 12 HELIX 56 AG2 GLY B 589 ASP B 598 1 10 HELIX 57 AG3 PHE B 602 LEU B 606 5 5 SHEET 1 AA1 5 ASN A 273 GLU A 275 0 SHEET 2 AA1 5 ILE A 82 LEU A 85 1 N ILE A 82 O ASN A 273 SHEET 3 AA1 5 ALA A 55 ILE A 58 1 N ILE A 57 O LEU A 85 SHEET 4 AA1 5 VAL A 315 LEU A 319 1 O PHE A 317 N ILE A 58 SHEET 5 AA1 5 LEU A 523 LEU A 526 1 O ALA A 524 N VAL A 316 SHEET 1 AA2 7 GLN A 163 ILE A 164 0 SHEET 2 AA2 7 LEU A 157 HIS A 159 -1 N HIS A 159 O GLN A 163 SHEET 3 AA2 7 ILE A 413 PHE A 416 1 O THR A 415 N MET A 158 SHEET 4 AA2 7 LEU A 423 CYS A 427 -1 O PHE A 425 N ILE A 414 SHEET 5 AA2 7 LEU A 441 ALA A 447 -1 O TRP A 444 N THR A 426 SHEET 6 AA2 7 TRP A 379 CYS A 386 -1 N LEU A 384 O LEU A 443 SHEET 7 AA2 7 THR A 490 MET A 497 -1 O LYS A 491 N THR A 385 SHEET 1 AA3 3 THR A 278 ASN A 288 0 SHEET 2 AA3 3 GLU A 291 VAL A 301 -1 O THR A 295 N ASP A 284 SHEET 3 AA3 3 ARG A 304 ASP A 309 -1 O GLN A 306 N ALA A 299 SHEET 1 AA4 5 ASN B 273 GLU B 275 0 SHEET 2 AA4 5 ILE B 82 LEU B 85 1 N ILE B 84 O ASN B 273 SHEET 3 AA4 5 ALA B 55 ILE B 58 1 N ILE B 57 O LEU B 85 SHEET 4 AA4 5 VAL B 315 LEU B 319 1 O PHE B 317 N ILE B 58 SHEET 5 AA4 5 LEU B 523 LEU B 526 1 O ALA B 524 N VAL B 316 SHEET 1 AA5 8 GLN B 163 ILE B 164 0 SHEET 2 AA5 8 LEU B 157 HIS B 159 -1 N HIS B 159 O GLN B 163 SHEET 3 AA5 8 ILE B 413 PHE B 416 1 O THR B 415 N MET B 158 SHEET 4 AA5 8 LEU B 423 CYS B 427 -1 O LEU B 423 N PHE B 416 SHEET 5 AA5 8 LEU B 441 ALA B 447 -1 O TRP B 444 N THR B 426 SHEET 6 AA5 8 TRP B 379 CYS B 386 -1 N CYS B 386 O LEU B 441 SHEET 7 AA5 8 THR B 490 MET B 497 -1 O LYS B 491 N THR B 385 SHEET 8 AA5 8 ALA B 328 ASP B 331 -1 N GLY B 330 O LEU B 494 SHEET 1 AA6 3 THR B 278 ASN B 288 0 SHEET 2 AA6 3 GLU B 291 VAL B 301 -1 O LEU B 298 N TYR B 281 SHEET 3 AA6 3 ARG B 304 ASP B 305 -1 O ARG B 304 N VAL B 301 SHEET 1 AA7 3 THR B 278 ASN B 288 0 SHEET 2 AA7 3 GLU B 291 VAL B 301 -1 O LEU B 298 N TYR B 281 SHEET 3 AA7 3 ILE B 308 ASP B 309 -1 O ILE B 308 N ILE B 297 CISPEP 1 GLY A 109 GLY A 110 0 11.86 CISPEP 2 SER A 134 PRO A 135 0 -6.53 CISPEP 3 GLN A 430 PRO A 431 0 5.74 CISPEP 4 SER B 134 PRO B 135 0 -7.51 CRYST1 62.061 235.252 176.372 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016113 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004251 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005670 0.00000