HEADER IMMUNE SYSTEM 30-JAN-18 5Z7Q TITLE CRYSTAL STRUCTURE OF BACILLUS CEREUS FLAGELLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAGELLIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 54-229; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS (STRAIN ATCC 14579 / DSM 31 / SOURCE 3 JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711); SOURCE 4 ORGANISM_TAXID: 226900; SOURCE 5 STRAIN: ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / SOURCE 6 NRRL B-3711; SOURCE 7 GENE: BC_1658; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIA, FLAGELLIN, ADJUVANT, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.KIM,M.HONG REVDAT 2 22-NOV-23 5Z7Q 1 REMARK REVDAT 1 30-MAY-18 5Z7Q 0 JRNL AUTH M.IL KIM,C.LEE,J.PARK,B.Y.JEON,M.HONG JRNL TITL CRYSTAL STRUCTURE OF BACILLUS CEREUS FLAGELLIN AND JRNL TITL 2 STRUCTURE-GUIDED FUSION-PROTEIN DESIGNS JRNL REF SCI REP V. 8 5814 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29643437 JRNL DOI 10.1038/S41598-018-24254-W REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 23911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1211 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1738 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1890 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.2230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1294 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 153 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.77000 REMARK 3 B22 (A**2) : -0.77000 REMARK 3 B33 (A**2) : 2.50000 REMARK 3 B12 (A**2) : -0.38000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.102 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.093 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.626 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1387 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1903 ; 1.164 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 206 ; 4.938 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 61 ;41.266 ;26.393 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 254 ;13.833 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;15.087 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 239 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1037 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 63 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): 15.6690 -41.9850 4.8890 REMARK 3 T TENSOR REMARK 3 T11: 0.0758 T22: 0.0657 REMARK 3 T33: 0.1172 T12: -0.0476 REMARK 3 T13: -0.0619 T23: 0.0729 REMARK 3 L TENSOR REMARK 3 L11: 6.1898 L22: 1.2062 REMARK 3 L33: 0.2474 L12: 2.6129 REMARK 3 L13: 0.8020 L23: 0.4550 REMARK 3 S TENSOR REMARK 3 S11: -0.2936 S12: 0.4868 S13: 0.4465 REMARK 3 S21: -0.1920 S22: 0.2103 S23: 0.2041 REMARK 3 S31: -0.1088 S32: 0.0599 S33: 0.0833 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 132 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): 3.7670 -45.4060 13.9780 REMARK 3 T TENSOR REMARK 3 T11: 0.0422 T22: 0.0694 REMARK 3 T33: 0.1759 T12: 0.0161 REMARK 3 T13: -0.0255 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 5.5698 L22: 1.7916 REMARK 3 L33: 0.7253 L12: 2.4779 REMARK 3 L13: -0.2988 L23: -0.1822 REMARK 3 S TENSOR REMARK 3 S11: -0.0704 S12: -0.2471 S13: 0.6926 REMARK 3 S21: 0.0151 S22: 0.0124 S23: 0.3224 REMARK 3 S31: -0.0708 S32: -0.1204 S33: 0.0580 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 180 A 217 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9920 -52.0670 11.5940 REMARK 3 T TENSOR REMARK 3 T11: 0.0259 T22: 0.0426 REMARK 3 T33: 0.0580 T12: -0.0033 REMARK 3 T13: -0.0056 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 7.4612 L22: 3.0030 REMARK 3 L33: 0.3105 L12: 4.3562 REMARK 3 L13: 1.3105 L23: 0.8834 REMARK 3 S TENSOR REMARK 3 S11: -0.0251 S12: -0.1081 S13: -0.0397 REMARK 3 S21: -0.0489 S22: 0.0113 S23: -0.1031 REMARK 3 S31: -0.0144 S32: 0.0037 S33: 0.0138 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 218 A 229 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6590 -73.5160 13.9980 REMARK 3 T TENSOR REMARK 3 T11: 0.5320 T22: 0.4072 REMARK 3 T33: 0.2208 T12: 0.0274 REMARK 3 T13: -0.0993 T23: 0.0404 REMARK 3 L TENSOR REMARK 3 L11: 2.0285 L22: 2.8289 REMARK 3 L33: 11.6989 L12: -2.0493 REMARK 3 L13: 4.8228 L23: -5.2913 REMARK 3 S TENSOR REMARK 3 S11: 0.2975 S12: -0.1021 S13: -0.2170 REMARK 3 S21: 0.2999 S22: 0.1452 S23: 0.0742 REMARK 3 S31: 0.3735 S32: -0.2858 S33: -0.4427 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 54 A 62 REMARK 3 ORIGIN FOR THE GROUP (A): -15.5590 -53.5440 11.9870 REMARK 3 T TENSOR REMARK 3 T11: 0.2575 T22: 0.1628 REMARK 3 T33: 0.1547 T12: 0.0021 REMARK 3 T13: 0.0341 T23: -0.0776 REMARK 3 L TENSOR REMARK 3 L11: 3.9096 L22: 1.7874 REMARK 3 L33: 14.5713 L12: -2.5793 REMARK 3 L13: -2.7210 L23: 2.6679 REMARK 3 S TENSOR REMARK 3 S11: -0.2262 S12: -0.3723 S13: 0.5073 REMARK 3 S21: 0.2178 S22: 0.1600 S23: -0.2758 REMARK 3 S31: 0.0954 S32: -0.7870 S33: 0.0663 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5Z7Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006622. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00002 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25160 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.24500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3K8W REMARK 200 REMARK 200 REMARK: ROD SHAPE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M GLYCINE, PH 10, 0.2M LITHIUM REMARK 280 SULFATE, 1.2M SODIUM DIHYDROGEN PHOSPHATE, AND 0.8M DI-POTASSIUM REMARK 280 HYDROGEN PHOSPHATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.79333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.39667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 26.79333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.39667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 63 CG CD OE1 NE2 REMARK 470 LEU A 72 CG CD1 CD2 REMARK 470 ASP A 108 CG OD1 OD2 REMARK 470 GLN A 116 CG CD OE1 NE2 REMARK 470 ASN A 198 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 191 OD2 ASP A 191 4545 1.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 154 35.00 -141.67 REMARK 500 THR A 170 -78.31 -129.47 REMARK 500 THR A 175 -88.52 -121.56 REMARK 500 REMARK 500 REMARK: NULL DBREF 5Z7Q A 54 229 UNP Q81FD4 Q81FD4_BACCR 54 229 SEQADV 5Z7Q GLN A 63 UNP Q81FD4 ALA 63 CONFLICT SEQADV 5Z7Q LEU A 72 UNP Q81FD4 ALA 72 CONFLICT SEQADV 5Z7Q THR A 105 UNP Q81FD4 GLU 105 CONFLICT SEQADV 5Z7Q ASP A 108 UNP Q81FD4 ALA 108 CONFLICT SEQADV 5Z7Q GLN A 116 UNP Q81FD4 ALA 116 CONFLICT SEQADV 5Z7Q ASN A 198 UNP Q81FD4 ALA 198 CONFLICT SEQRES 1 A 176 ALA LYS GLU GLY GLY LEU ASN VAL GLY GLN ARG ASN THR SEQRES 2 A 176 GLN ASP ALA MET SER LEU LEU ARG THR GLY ASP ALA ALA SEQRES 3 A 176 LEU GLY SER ILE SER ASN ILE LEU LEU ARG MET ARG ASP SEQRES 4 A 176 LEU ALA THR GLN ALA ALA ASN GLY THR ASN ASN ALA THR SEQRES 5 A 176 ASP THR ASP SER LEU ASP LYS GLU TYR VAL GLN LEU LYS SEQRES 6 A 176 ASP GLU ILE ASP HIS ILE ALA GLY LYS THR ASN PHE ASN SEQRES 7 A 176 GLY ASN SER PHE LEU ASP THR THR ALA THR PRO PRO GLY SEQRES 8 A 176 LYS ASP ILE GLU ILE GLN LEU SER ASP ALA SER GLY ASP SEQRES 9 A 176 THR MET THR LEU LYS ALA ILE ASP THR LYS SER LEU THR SEQRES 10 A 176 THR GLY THR LEU THR ASN LEU LYS ASP ARG ALA THR ALA SEQRES 11 A 176 GLU THR GLU ILE THR LYS LEU ASP THR ALA ILE GLN LYS SEQRES 12 A 176 ILE ASN ASP GLU ARG ALA THR PHE GLY SER GLN LEU ASN SEQRES 13 A 176 ARG LEU ASP HIS ASN LEU ASN ASN VAL THR SER GLN ALA SEQRES 14 A 176 THR ASN MET ALA ALA ALA ALA FORMUL 2 HOH *153(H2 O) HELIX 1 AA1 GLY A 62 ASN A 99 1 38 HELIX 2 AA2 ASN A 103 THR A 128 1 26 HELIX 3 AA3 ASP A 165 THR A 170 1 6 HELIX 4 AA4 THR A 171 LEU A 174 5 4 HELIX 5 AA5 ASP A 179 ASN A 217 1 39 HELIX 6 AA6 SER A 220 ALA A 227 1 8 SHEET 1 AA1 2 LYS A 55 GLU A 56 0 SHEET 2 AA1 2 LEU A 59 ASN A 60 -1 O LEU A 59 N GLU A 56 SHEET 1 AA2 2 ILE A 147 GLN A 150 0 SHEET 2 AA2 2 THR A 158 LEU A 161 -1 O LEU A 161 N ILE A 147 CISPEP 1 THR A 141 PRO A 142 0 -3.34 CRYST1 112.724 112.724 40.190 90.00 90.00 120.00 P 62 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008871 0.005122 0.000000 0.00000 SCALE2 0.000000 0.010244 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024882 0.00000