HEADER STRUCTURAL PROTEIN 18-MAR-18 5ZIY TITLE CRYSTAL STRUCTURE OF BACILLUS CEREUS FLGL COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAGELLAR HOOK-ASSOCIATED PROTEIN 3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 45-251; COMPND 5 SYNONYM: FLAGELLAR HOOK-ASSOCIATED PROTEIN FLGL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS; SOURCE 3 ORGANISM_TAXID: 1396; SOURCE 4 GENE: FLGL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS FLAGELLUM, JUNCTION, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.J.HONG,T.H.KIM,W.S.SONG,S.I.YOON REVDAT 2 27-MAR-24 5ZIY 1 LINK REVDAT 1 17-OCT-18 5ZIY 0 JRNL AUTH H.J.HONG,T.H.KIM,W.S.SONG,H.J.KO,G.S.LEE,S.G.KANG,P.H.KIM, JRNL AUTH 2 S.I.YOON JRNL TITL CRYSTAL STRUCTURE OF FLGL AND ITS IMPLICATIONS FOR FLAGELLAR JRNL TITL 2 ASSEMBLY JRNL REF SCI REP V. 8 14307 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 30250171 JRNL DOI 10.1038/S41598-018-32460-9 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 22641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1214 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1674 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2755 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 88 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.26000 REMARK 3 B22 (A**2) : 1.75000 REMARK 3 B33 (A**2) : 2.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.243 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.202 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2781 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1768 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3763 ; 1.365 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4375 ; 4.392 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 364 ; 4.990 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 127 ;40.276 ;27.008 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 483 ;15.299 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;11.573 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 447 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3149 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 489 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1816 ; 0.573 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 754 ; 0.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2886 ; 1.081 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 965 ; 2.114 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 877 ; 3.611 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 66 A 95 5 REMARK 3 1 B 66 B 95 5 REMARK 3 2 A 114 A 185 5 REMARK 3 2 B 114 B 185 5 REMARK 3 3 A 203 A 235 5 REMARK 3 3 B 203 B 235 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 797 ; 0.15 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 909 ; 0.35 ; 5.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 797 ; 0.57 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 909 ; 0.73 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 45 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): 21.9660 -5.6290 -2.3760 REMARK 3 T TENSOR REMARK 3 T11: 0.3158 T22: 0.0247 REMARK 3 T33: 0.1759 T12: 0.0047 REMARK 3 T13: -0.0537 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 17.4141 L22: 1.5130 REMARK 3 L33: 2.4476 L12: 1.8062 REMARK 3 L13: 4.5878 L23: 0.8752 REMARK 3 S TENSOR REMARK 3 S11: 0.2038 S12: 0.0691 S13: -0.8993 REMARK 3 S21: 0.1770 S22: -0.0453 S23: -0.1867 REMARK 3 S31: 0.0861 S32: -0.1389 S33: -0.1585 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 196 REMARK 3 ORIGIN FOR THE GROUP (A): 32.9650 6.7770 0.1480 REMARK 3 T TENSOR REMARK 3 T11: 0.3267 T22: 0.0284 REMARK 3 T33: 0.1042 T12: 0.0031 REMARK 3 T13: -0.0511 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 6.3246 L22: 1.8253 REMARK 3 L33: 0.9773 L12: 1.0258 REMARK 3 L13: 1.2508 L23: 0.1012 REMARK 3 S TENSOR REMARK 3 S11: -0.0474 S12: 0.0325 S13: 0.2044 REMARK 3 S21: 0.0146 S22: -0.0259 S23: -0.3109 REMARK 3 S31: -0.0726 S32: 0.0347 S33: 0.0734 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 197 A 243 REMARK 3 ORIGIN FOR THE GROUP (A): 25.8250 -5.5430 5.9750 REMARK 3 T TENSOR REMARK 3 T11: 0.3377 T22: 0.1059 REMARK 3 T33: 0.1700 T12: 0.0057 REMARK 3 T13: -0.0774 T23: 0.0993 REMARK 3 L TENSOR REMARK 3 L11: 15.6760 L22: 5.2607 REMARK 3 L33: 2.0774 L12: 7.2042 REMARK 3 L13: 4.4637 L23: 2.6186 REMARK 3 S TENSOR REMARK 3 S11: 0.5561 S12: -0.5535 S13: -0.7279 REMARK 3 S21: 0.6052 S22: -0.2801 S23: -0.2952 REMARK 3 S31: 0.2160 S32: -0.1330 S33: -0.2760 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 56 B 97 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4880 5.4730 -21.9970 REMARK 3 T TENSOR REMARK 3 T11: 0.3493 T22: 0.2453 REMARK 3 T33: 0.0432 T12: -0.0015 REMARK 3 T13: -0.0530 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 23.5561 L22: 1.2353 REMARK 3 L33: 4.1225 L12: -1.9095 REMARK 3 L13: 5.2199 L23: -0.5166 REMARK 3 S TENSOR REMARK 3 S11: 0.2254 S12: 1.7162 S13: -0.1128 REMARK 3 S21: -0.1177 S22: -0.1305 S23: 0.0439 REMARK 3 S31: 0.1222 S32: 0.1494 S33: -0.0948 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 110 B 196 REMARK 3 ORIGIN FOR THE GROUP (A): 1.8950 10.9010 -13.3880 REMARK 3 T TENSOR REMARK 3 T11: 0.3149 T22: 0.1333 REMARK 3 T33: 0.0787 T12: -0.0107 REMARK 3 T13: -0.0433 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: 5.3426 L22: 1.5385 REMARK 3 L33: 3.6578 L12: 0.2050 REMARK 3 L13: 0.3819 L23: -0.0874 REMARK 3 S TENSOR REMARK 3 S11: -0.0625 S12: 0.2307 S13: 0.3934 REMARK 3 S21: 0.0393 S22: 0.1059 S23: 0.1829 REMARK 3 S31: 0.0585 S32: -0.4802 S33: -0.0435 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 197 B 240 REMARK 3 ORIGIN FOR THE GROUP (A): 7.9470 12.4380 -26.0280 REMARK 3 T TENSOR REMARK 3 T11: 0.3803 T22: 0.4394 REMARK 3 T33: 0.0882 T12: -0.0080 REMARK 3 T13: -0.0698 T23: 0.0868 REMARK 3 L TENSOR REMARK 3 L11: 33.6517 L22: 3.9028 REMARK 3 L33: 4.2415 L12: -8.4354 REMARK 3 L13: -6.0343 L23: 1.1754 REMARK 3 S TENSOR REMARK 3 S11: 0.3963 S12: 1.2578 S13: -0.0067 REMARK 3 S21: -0.2607 S22: -0.2092 S23: 0.3423 REMARK 3 S31: -0.0654 S32: -0.0746 S33: -0.1871 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5ZIY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1300007162. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23891 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 8000, 0.1M HEPES, PH 7.4, AND REMARK 280 0.2M ZINC ACETATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 69.30950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.99300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 69.30950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.99300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 39 REMARK 465 SER A 40 REMARK 465 ALA A 41 REMARK 465 LYS A 42 REMARK 465 ASP A 43 REMARK 465 PRO A 44 REMARK 465 GLY A 100 REMARK 465 THR A 101 REMARK 465 ASN A 102 REMARK 465 SER A 103 REMARK 465 GLU A 244 REMARK 465 ASN A 245 REMARK 465 ARG A 246 REMARK 465 LYS A 247 REMARK 465 GLU A 248 REMARK 465 ILE A 249 REMARK 465 GLU A 250 REMARK 465 ASP A 251 REMARK 465 GLY B 39 REMARK 465 SER B 40 REMARK 465 ALA B 41 REMARK 465 LYS B 42 REMARK 465 ASP B 43 REMARK 465 PRO B 44 REMARK 465 ALA B 45 REMARK 465 ALA B 46 REMARK 465 SER B 47 REMARK 465 LYS B 48 REMARK 465 SER B 49 REMARK 465 PHE B 50 REMARK 465 ALA B 51 REMARK 465 ILE B 52 REMARK 465 GLN B 53 REMARK 465 HIS B 54 REMARK 465 SER B 55 REMARK 465 LEU B 98 REMARK 465 ASN B 99 REMARK 465 GLY B 100 REMARK 465 THR B 101 REMARK 465 ASN B 102 REMARK 465 SER B 103 REMARK 465 GLU B 104 REMARK 465 LYS B 105 REMARK 465 GLU B 106 REMARK 465 LEU B 107 REMARK 465 GLN B 108 REMARK 465 ALA B 109 REMARK 465 ALA B 241 REMARK 465 LEU B 242 REMARK 465 GLN B 243 REMARK 465 GLU B 244 REMARK 465 ASN B 245 REMARK 465 ARG B 246 REMARK 465 LYS B 247 REMARK 465 GLU B 248 REMARK 465 ILE B 249 REMARK 465 GLU B 250 REMARK 465 ASP B 251 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 GLN A 63 CG CD OE1 NE2 REMARK 470 LYS A 70 CE NZ REMARK 470 ASN A 99 CG OD1 ND2 REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 GLU A 106 CG CD OE1 OE2 REMARK 470 GLN A 108 CG CD OE1 NE2 REMARK 470 GLU A 147 CG CD OE1 OE2 REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 GLN A 197 CG CD OE1 NE2 REMARK 470 LYS A 201 CG CD CE NZ REMARK 470 GLN A 243 OE1 NE2 REMARK 470 LEU B 56 CG CD1 CD2 REMARK 470 GLN B 63 CG CD OE1 NE2 REMARK 470 LYS B 70 CG CD CE NZ REMARK 470 LYS B 85 CD CE NZ REMARK 470 GLN B 96 CG CD OE1 NE2 REMARK 470 ILE B 110 CG1 CG2 CD1 REMARK 470 GLN B 116 CG CD OE1 NE2 REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 GLU B 147 CG CD OE1 OE2 REMARK 470 LYS B 155 CG CD CE NZ REMARK 470 LYS B 186 CE NZ REMARK 470 GLU B 190 CG CD OE1 OE2 REMARK 470 GLN B 193 CG CD OE1 NE2 REMARK 470 LYS B 198 CG CD CE NZ REMARK 470 LYS B 201 CG CD CE NZ REMARK 470 GLU B 237 CG CD OE1 OE2 REMARK 470 VAL B 240 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 138 31.36 -99.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 129 OE1 REMARK 620 2 GLU A 129 OE2 51.3 REMARK 620 3 HOH A 428 O 73.7 86.9 REMARK 620 4 ASP B 68 OD1 131.9 110.1 154.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 305 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 141 OE1 REMARK 620 2 GLU A 141 OE2 50.6 REMARK 620 3 GLU B 167 OE2 95.9 113.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 306 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 148 OD1 REMARK 620 2 ASP A 148 OD2 53.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 167 OE2 REMARK 620 2 HOH A 443 O 107.0 REMARK 620 3 GLU B 141 OE1 98.8 147.2 REMARK 620 4 GLU B 141 OE2 105.5 101.0 51.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 229 OE2 REMARK 620 2 HOH A 417 O 91.4 REMARK 620 3 HOH A 447 O 101.2 100.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 DBREF1 5ZIY A 45 251 UNP A0A164TZ51_BACCE DBREF2 5ZIY A A0A164TZ51 45 251 DBREF1 5ZIY B 45 251 UNP A0A164TZ51_BACCE DBREF2 5ZIY B A0A164TZ51 45 251 SEQADV 5ZIY GLY A 39 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY SER A 40 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY ALA A 41 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY LYS A 42 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY ASP A 43 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY PRO A 44 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY GLY B 39 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY SER B 40 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY ALA B 41 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY LYS B 42 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY ASP B 43 UNP A0A164TZ5 EXPRESSION TAG SEQADV 5ZIY PRO B 44 UNP A0A164TZ5 EXPRESSION TAG SEQRES 1 A 213 GLY SER ALA LYS ASP PRO ALA ALA SER LYS SER PHE ALA SEQRES 2 A 213 ILE GLN HIS SER LEU ALA ASN MET GLU GLN MET GLN LYS SEQRES 3 A 213 ASP ILE ALA ASP SER LYS ASN VAL LEU THR GLN THR GLU SEQRES 4 A 213 ASN THR LEU GLN GLY VAL LEU LYS SER LEU THR ARG ALA SEQRES 5 A 213 ASP GLN LEU THR VAL GLN ALA LEU ASN GLY THR ASN SER SEQRES 6 A 213 GLU LYS GLU LEU GLN ALA ILE GLY VAL GLU ILE ASP GLN SEQRES 7 A 213 ILE LEU LYS GLN VAL VAL TYR LEU ALA ASN THR LYS GLU SEQRES 8 A 213 GLN GLY ARG TYR ILE PHE GLY GLY ASP SER ALA GLU ASN SEQRES 9 A 213 LEU PRO PHE THR GLU ASP GLY THR TYR GLN GLY GLY LYS SEQRES 10 A 213 ASN ASP VAL ASN TRP LYS LEU ASN ASP GLY TYR GLU PHE SEQRES 11 A 213 LYS ALA PHE ARG ASN GLY GLU ALA LEU LEU SER PRO VAL SEQRES 12 A 213 ILE LYS THR LEU LYS GLN MET SER GLU ALA MET GLN ASN SEQRES 13 A 213 GLY ASP GLN LYS ALA LEU LYS PRO LEU LEU GLU GLU ASN SEQRES 14 A 213 LYS GLN ASN LEU ASP GLY ILE ILE ASN ARG THR THR GLU SEQRES 15 A 213 VAL GLY SER THR MET ASN THR MET GLU THR PHE LYS THR SEQRES 16 A 213 ILE LEU SER GLU GLN ASN VAL ALA LEU GLN GLU ASN ARG SEQRES 17 A 213 LYS GLU ILE GLU ASP SEQRES 1 B 213 GLY SER ALA LYS ASP PRO ALA ALA SER LYS SER PHE ALA SEQRES 2 B 213 ILE GLN HIS SER LEU ALA ASN MET GLU GLN MET GLN LYS SEQRES 3 B 213 ASP ILE ALA ASP SER LYS ASN VAL LEU THR GLN THR GLU SEQRES 4 B 213 ASN THR LEU GLN GLY VAL LEU LYS SER LEU THR ARG ALA SEQRES 5 B 213 ASP GLN LEU THR VAL GLN ALA LEU ASN GLY THR ASN SER SEQRES 6 B 213 GLU LYS GLU LEU GLN ALA ILE GLY VAL GLU ILE ASP GLN SEQRES 7 B 213 ILE LEU LYS GLN VAL VAL TYR LEU ALA ASN THR LYS GLU SEQRES 8 B 213 GLN GLY ARG TYR ILE PHE GLY GLY ASP SER ALA GLU ASN SEQRES 9 B 213 LEU PRO PHE THR GLU ASP GLY THR TYR GLN GLY GLY LYS SEQRES 10 B 213 ASN ASP VAL ASN TRP LYS LEU ASN ASP GLY TYR GLU PHE SEQRES 11 B 213 LYS ALA PHE ARG ASN GLY GLU ALA LEU LEU SER PRO VAL SEQRES 12 B 213 ILE LYS THR LEU LYS GLN MET SER GLU ALA MET GLN ASN SEQRES 13 B 213 GLY ASP GLN LYS ALA LEU LYS PRO LEU LEU GLU GLU ASN SEQRES 14 B 213 LYS GLN ASN LEU ASP GLY ILE ILE ASN ARG THR THR GLU SEQRES 15 B 213 VAL GLY SER THR MET ASN THR MET GLU THR PHE LYS THR SEQRES 16 B 213 ILE LEU SER GLU GLN ASN VAL ALA LEU GLN GLU ASN ARG SEQRES 17 B 213 LYS GLU ILE GLU ASP HET ZN A 301 1 HET ZN A 302 1 HET ZN A 303 1 HET ZN A 304 1 HET ZN A 305 1 HET ZN A 306 1 HET ZN B 301 1 HETNAM ZN ZINC ION FORMUL 3 ZN 7(ZN 2+) FORMUL 10 HOH *88(H2 O) HELIX 1 AA1 ALA A 45 ASN A 99 1 55 HELIX 2 AA2 LYS A 105 ASN A 126 1 22 HELIX 3 AA3 GLY A 174 ASN A 194 1 21 HELIX 4 AA4 ALA A 199 GLN A 243 1 45 HELIX 5 AA5 ALA B 57 ALA B 97 1 41 HELIX 6 AA6 VAL B 112 ASN B 126 1 15 HELIX 7 AA7 GLY B 174 ASN B 194 1 21 HELIX 8 AA8 ASP B 196 ASN B 239 1 44 SHEET 1 AA1 2 LYS A 128 GLU A 129 0 SHEET 2 AA1 2 ARG A 132 TYR A 133 -1 O ARG A 132 N GLU A 129 SHEET 1 AA2 2 VAL A 158 LYS A 161 0 SHEET 2 AA2 2 GLU A 167 PHE A 171 -1 O PHE A 171 N VAL A 158 SHEET 1 AA3 2 LYS B 128 GLU B 129 0 SHEET 2 AA3 2 ARG B 132 TYR B 133 -1 O ARG B 132 N GLU B 129 SHEET 1 AA4 2 VAL B 158 LYS B 161 0 SHEET 2 AA4 2 GLU B 167 PHE B 171 -1 O PHE B 171 N VAL B 158 LINK ND1 HIS A 54 ZN ZN A 304 1555 1555 2.23 LINK OE1 GLU A 129 ZN ZN A 302 1555 1555 2.62 LINK OE2 GLU A 129 ZN ZN A 302 1555 1555 2.47 LINK OE1 GLU A 141 ZN ZN A 305 1555 1555 2.57 LINK OE2 GLU A 141 ZN ZN A 305 1555 1555 2.61 LINK OD1 ASP A 148 ZN ZN A 306 1555 4555 2.58 LINK OD2 ASP A 148 ZN ZN A 306 1555 4555 2.33 LINK OE2 GLU A 167 ZN ZN A 301 1555 1555 2.16 LINK OE2 GLU A 229 ZN ZN A 303 1555 1555 2.01 LINK ZN ZN A 301 O HOH A 443 1555 1555 2.60 LINK ZN ZN A 301 OE1 GLU B 141 1555 1555 2.69 LINK ZN ZN A 301 OE2 GLU B 141 1555 1555 2.34 LINK ZN ZN A 302 O HOH A 428 1555 1555 2.52 LINK ZN ZN A 302 OD1 ASP B 68 1555 1555 2.20 LINK ZN ZN A 303 O HOH A 417 1555 4545 2.50 LINK ZN ZN A 303 O HOH A 447 1555 1555 2.45 LINK ZN ZN A 305 OE2 GLU B 167 1555 1555 2.11 LINK OE2 GLU B 129 ZN ZN B 301 1555 1555 2.21 SITE 1 AC1 3 GLU A 167 HOH A 443 GLU B 141 SITE 1 AC2 4 GLU A 129 GLN A 130 HOH A 428 ASP B 68 SITE 1 AC3 4 LYS A 70 GLU A 229 HOH A 417 HOH A 447 SITE 1 AC4 1 HIS A 54 SITE 1 AC5 3 ASP A 91 GLU A 141 GLU B 167 SITE 1 AC6 2 GLU A 77 ASP A 148 SITE 1 AC7 1 GLU B 129 CRYST1 138.619 57.986 67.914 90.00 114.80 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007214 0.000000 0.003333 0.00000 SCALE2 0.000000 0.017246 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016220 0.00000