HEADER TRANSFERASE 19-MAR-18 5ZJ6 TITLE CRYSTAL STRUCTURE OF HCK KINASE COMPLEXED WITH A PYRROLO-PYRIMIDINE TITLE 2 INHIBITOR 7-[TRANS-4-(4-METHYLPIPERAZIN-1-YL)CYCLOHEXYL]-5-(4- TITLE 3 PHENOXYPHENYL)-7H-PYRROLO[2,3-D]PYRIMIDIN-4-AMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE HCK; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HEMATOPOIETIC CELL KINASE,HEMOPOIETIC CELL KINASE,P59- COMPND 5 HCK/P60-HCK,P59HCK,P61HCK; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HCK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS KINASE/KINASE INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.TOMABECHI,M.KUKIMOTO-NIINO,M.SHIROUZU REVDAT 3 22-NOV-23 5ZJ6 1 REMARK REVDAT 2 13-JUN-18 5ZJ6 1 JRNL REVDAT 1 06-JUN-18 5ZJ6 0 JRNL AUTH K.KATSURA,Y.TOMABECHI,T.MATSUDA,M.YONEMOCHI,J.MIKUNI, JRNL AUTH 2 N.OHSAWA,T.TERADA,S.YOKOYAMA,M.KUKIMOTO-NIINO,C.TAKEMOTO, JRNL AUTH 3 M.SHIROUZU JRNL TITL PHOSPHORYLATED AND NON-PHOSPHORYLATED HCK KINASE DOMAINS JRNL TITL 2 PRODUCED BY CELL-FREE PROTEIN EXPRESSION. JRNL REF PROTEIN EXPR. PURIF. V. 150 92 2018 JRNL REFN ESSN 1096-0279 JRNL PMID 29793032 JRNL DOI 10.1016/J.PEP.2018.05.005 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 56327 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.560 REMARK 3 FREE R VALUE TEST SET COUNT : 2005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.1037 - 4.0861 0.95 4001 151 0.1925 0.1985 REMARK 3 2 4.0861 - 3.2438 0.94 3955 146 0.1749 0.2095 REMARK 3 3 3.2438 - 2.8339 0.95 4009 144 0.2005 0.2403 REMARK 3 4 2.8339 - 2.5749 0.94 3977 149 0.2126 0.2375 REMARK 3 5 2.5749 - 2.3903 0.94 3933 141 0.2069 0.2396 REMARK 3 6 2.3903 - 2.2494 0.92 3896 148 0.2007 0.2626 REMARK 3 7 2.2494 - 2.1368 0.91 3798 142 0.2073 0.2516 REMARK 3 8 2.1368 - 2.0438 0.90 3783 145 0.2141 0.2492 REMARK 3 9 2.0438 - 1.9651 0.91 3889 141 0.2122 0.2570 REMARK 3 10 1.9651 - 1.8973 0.90 3785 140 0.2262 0.2565 REMARK 3 11 1.8973 - 1.8380 0.92 3849 141 0.2489 0.2715 REMARK 3 12 1.8380 - 1.7854 0.93 3910 135 0.2726 0.3261 REMARK 3 13 1.7854 - 1.7384 0.93 3985 153 0.2816 0.3228 REMARK 3 14 1.7384 - 1.6960 0.85 3552 129 0.2917 0.3594 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4543 REMARK 3 ANGLE : 0.656 6148 REMARK 3 CHIRALITY : 0.047 659 REMARK 3 PLANARITY : 0.004 774 REMARK 3 DIHEDRAL : 11.796 2743 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZJ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1300007148. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56349 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.696 REMARK 200 RESOLUTION RANGE LOW (A) : 38.094 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : 1.989 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.95 REMARK 200 R MERGE FOR SHELL (I) : 0.45200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.670 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.0 REMARK 200 STARTING MODEL: 2HK5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL (PH 8.5) 25 % (V/V) PEG REMARK 280 10,000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 240 REMARK 465 SER A 241 REMARK 465 SER A 242 REMARK 465 GLY A 243 REMARK 465 SER A 244 REMARK 465 SER A 245 REMARK 465 GLY A 246 REMARK 465 MET A 247 REMARK 465 SER A 248 REMARK 465 SER A 249 REMARK 465 LYS A 250 REMARK 465 PRO A 251 REMARK 465 GLN A 252 REMARK 465 GLU A 524 REMARK 465 SER A 525 REMARK 465 GLN A 526 REMARK 465 GLY B 240 REMARK 465 SER B 241 REMARK 465 SER B 242 REMARK 465 GLY B 243 REMARK 465 SER B 244 REMARK 465 SER B 245 REMARK 465 GLY B 246 REMARK 465 MET B 247 REMARK 465 SER B 248 REMARK 465 SER B 249 REMARK 465 LYS B 250 REMARK 465 PRO B 251 REMARK 465 GLN B 252 REMARK 465 LYS B 253 REMARK 465 GLU B 524 REMARK 465 SER B 525 REMARK 465 GLN B 526 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 257 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 740 O HOH B 975 1.87 REMARK 500 O HOH B 946 O HOH B 962 1.87 REMARK 500 O HOH A 734 O HOH A 844 1.90 REMARK 500 O HOH A 948 O HOH A 1000 1.90 REMARK 500 O HOH A 878 O HOH A 923 1.93 REMARK 500 O HOH A 900 O HOH A 945 1.93 REMARK 500 O HOH A 919 O HOH A 1025 1.93 REMARK 500 O HOH A 989 O HOH A 1012 1.93 REMARK 500 O HOH A 970 O HOH A 1000 1.94 REMARK 500 OE2 GLU A 485 O HOH A 701 1.95 REMARK 500 O HOH B 847 O HOH B 983 1.95 REMARK 500 O HOH A 1004 O HOH A 1011 1.96 REMARK 500 O HOH B 932 O HOH B 968 1.97 REMARK 500 N ALA B 433 O HOH B 701 1.97 REMARK 500 O HOH B 704 O HOH B 747 1.98 REMARK 500 OE2 GLU B 420 O HOH B 702 2.01 REMARK 500 O HOH A 912 O HOH A 914 2.02 REMARK 500 O HOH A 984 O HOH B 1002 2.02 REMARK 500 O HOH A 983 O HOH A 1019 2.03 REMARK 500 O HOH B 1011 O HOH B 1015 2.05 REMARK 500 O HOH B 999 O HOH B 1012 2.06 REMARK 500 O HOH A 981 O HOH A 984 2.06 REMARK 500 O HOH A 909 O HOH A 915 2.07 REMARK 500 O HOH B 929 O HOH B 976 2.07 REMARK 500 O HOH B 894 O HOH B 934 2.07 REMARK 500 O HOH A 941 O HOH A 948 2.07 REMARK 500 O ALA B 430 O HOH B 701 2.07 REMARK 500 O HOH A 790 O HOH A 855 2.09 REMARK 500 NH1 ARG A 409 O HOH A 702 2.09 REMARK 500 O HOH A 819 O HOH A 968 2.09 REMARK 500 O HOH B 812 O HOH B 877 2.09 REMARK 500 O LYS B 362 O HOH B 703 2.10 REMARK 500 O HOH B 837 O HOH B 974 2.10 REMARK 500 OE1 GLU B 261 O HOH B 704 2.10 REMARK 500 NZ LYS A 351 O HOH A 703 2.10 REMARK 500 O HOH A 706 O HOH A 988 2.10 REMARK 500 OE2 GLU A 332 O HOH A 704 2.11 REMARK 500 O HOH A 725 O HOH A 939 2.12 REMARK 500 O HOH A 875 O HOH A 958 2.12 REMARK 500 O HOH A 730 O HOH A 946 2.13 REMARK 500 O HOH A 981 O HOH B 1002 2.13 REMARK 500 O HOH B 943 O HOH B 1011 2.14 REMARK 500 O HOH B 933 O HOH B 943 2.14 REMARK 500 O HOH A 911 O HOH A 1020 2.15 REMARK 500 O HOH B 947 O HOH B 958 2.16 REMARK 500 O HOH A 862 O HOH A 940 2.16 REMARK 500 O HOH B 741 O HOH B 872 2.16 REMARK 500 O HOH B 947 O HOH B 1013 2.16 REMARK 500 O PRO A 464 O HOH A 705 2.16 REMARK 500 O HOH B 728 O HOH B 902 2.16 REMARK 500 REMARK 500 THIS ENTRY HAS 63 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 889 O HOH B 918 1455 1.93 REMARK 500 O HOH B 844 O HOH B 893 1455 2.02 REMARK 500 O HOH A 870 O HOH B 928 1455 2.08 REMARK 500 O HOH A 841 O HOH B 814 1455 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 289 -13.72 -155.84 REMARK 500 ARG A 385 -11.40 86.39 REMARK 500 ASP A 386 57.22 -152.98 REMARK 500 HIS B 289 -19.14 -147.98 REMARK 500 ARG B 385 -14.13 86.07 REMARK 500 ASP B 386 54.90 -150.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1034 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A1035 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A1036 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A1037 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A1038 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A1039 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A1040 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH A1041 DISTANCE = 7.14 ANGSTROMS REMARK 525 HOH A1042 DISTANCE = 7.31 ANGSTROMS REMARK 525 HOH A1043 DISTANCE = 7.67 ANGSTROMS REMARK 525 HOH A1044 DISTANCE = 7.78 ANGSTROMS REMARK 525 HOH B1024 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B1025 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B1026 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH B1027 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B1028 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B1029 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH B1030 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH B1031 DISTANCE = 6.76 ANGSTROMS REMARK 525 HOH B1032 DISTANCE = 8.27 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VSE A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VSE B 601 DBREF 5ZJ6 A 247 526 UNP P08631 HCK_HUMAN 242 521 DBREF 5ZJ6 B 247 526 UNP P08631 HCK_HUMAN 242 521 SEQADV 5ZJ6 GLY A 240 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 SER A 241 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 SER A 242 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 GLY A 243 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 SER A 244 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 SER A 245 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 GLY A 246 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 GLY B 240 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 SER B 241 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 SER B 242 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 GLY B 243 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 SER B 244 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 SER B 245 UNP P08631 EXPRESSION TAG SEQADV 5ZJ6 GLY B 246 UNP P08631 EXPRESSION TAG SEQRES 1 A 287 GLY SER SER GLY SER SER GLY MET SER SER LYS PRO GLN SEQRES 2 A 287 LYS PRO TRP GLU LYS ASP ALA TRP GLU ILE PRO ARG GLU SEQRES 3 A 287 SER LEU LYS LEU GLU LYS LYS LEU GLY ALA GLY GLN PHE SEQRES 4 A 287 GLY GLU VAL TRP MET ALA THR TYR ASN LYS HIS THR LYS SEQRES 5 A 287 VAL ALA VAL LYS THR MET LYS PRO GLY SER MET SER VAL SEQRES 6 A 287 GLU ALA PHE LEU ALA GLU ALA ASN VAL MET LYS THR LEU SEQRES 7 A 287 GLN HIS ASP LYS LEU VAL LYS LEU HIS ALA VAL VAL THR SEQRES 8 A 287 LYS GLU PRO ILE TYR ILE ILE THR GLU PHE MET ALA LYS SEQRES 9 A 287 GLY SER LEU LEU ASP PHE LEU LYS SER ASP GLU GLY SER SEQRES 10 A 287 LYS GLN PRO LEU PRO LYS LEU ILE ASP PHE SER ALA GLN SEQRES 11 A 287 ILE ALA GLU GLY MET ALA PHE ILE GLU GLN ARG ASN TYR SEQRES 12 A 287 ILE HIS ARG ASP LEU ARG ALA ALA ASN ILE LEU VAL SER SEQRES 13 A 287 ALA SER LEU VAL CYS LYS ILE ALA ASP PHE GLY LEU ALA SEQRES 14 A 287 ARG VAL ILE GLU ASP ASN GLU TYR THR ALA ARG GLU GLY SEQRES 15 A 287 ALA LYS PHE PRO ILE LYS TRP THR ALA PRO GLU ALA ILE SEQRES 16 A 287 ASN PHE GLY SER PHE THR ILE LYS SER ASP VAL TRP SER SEQRES 17 A 287 PHE GLY ILE LEU LEU MET GLU ILE VAL THR TYR GLY ARG SEQRES 18 A 287 ILE PRO TYR PRO GLY MET SER ASN PRO GLU VAL ILE ARG SEQRES 19 A 287 ALA LEU GLU ARG GLY TYR ARG MET PRO ARG PRO GLU ASN SEQRES 20 A 287 CYS PRO GLU GLU LEU TYR ASN ILE MET MET ARG CYS TRP SEQRES 21 A 287 LYS ASN ARG PRO GLU GLU ARG PRO THR PHE GLU TYR ILE SEQRES 22 A 287 GLN SER VAL LEU ASP ASP PHE TYR THR ALA THR GLU SER SEQRES 23 A 287 GLN SEQRES 1 B 287 GLY SER SER GLY SER SER GLY MET SER SER LYS PRO GLN SEQRES 2 B 287 LYS PRO TRP GLU LYS ASP ALA TRP GLU ILE PRO ARG GLU SEQRES 3 B 287 SER LEU LYS LEU GLU LYS LYS LEU GLY ALA GLY GLN PHE SEQRES 4 B 287 GLY GLU VAL TRP MET ALA THR TYR ASN LYS HIS THR LYS SEQRES 5 B 287 VAL ALA VAL LYS THR MET LYS PRO GLY SER MET SER VAL SEQRES 6 B 287 GLU ALA PHE LEU ALA GLU ALA ASN VAL MET LYS THR LEU SEQRES 7 B 287 GLN HIS ASP LYS LEU VAL LYS LEU HIS ALA VAL VAL THR SEQRES 8 B 287 LYS GLU PRO ILE TYR ILE ILE THR GLU PHE MET ALA LYS SEQRES 9 B 287 GLY SER LEU LEU ASP PHE LEU LYS SER ASP GLU GLY SER SEQRES 10 B 287 LYS GLN PRO LEU PRO LYS LEU ILE ASP PHE SER ALA GLN SEQRES 11 B 287 ILE ALA GLU GLY MET ALA PHE ILE GLU GLN ARG ASN TYR SEQRES 12 B 287 ILE HIS ARG ASP LEU ARG ALA ALA ASN ILE LEU VAL SER SEQRES 13 B 287 ALA SER LEU VAL CYS LYS ILE ALA ASP PHE GLY LEU ALA SEQRES 14 B 287 ARG VAL ILE GLU ASP ASN GLU TYR THR ALA ARG GLU GLY SEQRES 15 B 287 ALA LYS PHE PRO ILE LYS TRP THR ALA PRO GLU ALA ILE SEQRES 16 B 287 ASN PHE GLY SER PHE THR ILE LYS SER ASP VAL TRP SER SEQRES 17 B 287 PHE GLY ILE LEU LEU MET GLU ILE VAL THR TYR GLY ARG SEQRES 18 B 287 ILE PRO TYR PRO GLY MET SER ASN PRO GLU VAL ILE ARG SEQRES 19 B 287 ALA LEU GLU ARG GLY TYR ARG MET PRO ARG PRO GLU ASN SEQRES 20 B 287 CYS PRO GLU GLU LEU TYR ASN ILE MET MET ARG CYS TRP SEQRES 21 B 287 LYS ASN ARG PRO GLU GLU ARG PRO THR PHE GLU TYR ILE SEQRES 22 B 287 GLN SER VAL LEU ASP ASP PHE TYR THR ALA THR GLU SER SEQRES 23 B 287 GLN HET VSE A 601 36 HET VSE B 601 36 HETNAM VSE 7-[TRANS-4-(4-METHYLPIPERAZIN-1-YL)CYCLOHEXYL]-5-(4- HETNAM 2 VSE PHENOXYPHENYL)-7H-PYRROLO[2,3-D]PYRIMIDIN-4-AMINE FORMUL 3 VSE 2(C29 H34 N6 O) FORMUL 5 HOH *676(H2 O) HELIX 1 AA1 PRO A 263 GLU A 265 5 3 HELIX 2 AA2 SER A 303 LYS A 315 1 13 HELIX 3 AA3 SER A 345 LYS A 351 1 7 HELIX 4 AA4 GLU A 354 GLN A 358 5 5 HELIX 5 AA5 PRO A 359 ARG A 380 1 22 HELIX 6 AA6 ARG A 388 ALA A 390 5 3 HELIX 7 AA7 GLY A 406 ILE A 411 5 6 HELIX 8 AA8 ASN A 414 ARG A 419 1 6 HELIX 9 AA9 PRO A 425 THR A 429 5 5 HELIX 10 AB1 ALA A 430 GLY A 437 1 8 HELIX 11 AB2 THR A 440 THR A 457 1 18 HELIX 12 AB3 SER A 467 ARG A 477 1 11 HELIX 13 AB4 PRO A 488 TRP A 499 1 12 HELIX 14 AB5 ARG A 502 ARG A 506 5 5 HELIX 15 AB6 THR A 508 THR A 523 1 16 HELIX 16 AB7 PRO B 263 GLU B 265 5 3 HELIX 17 AB8 SER B 303 LYS B 315 1 13 HELIX 18 AB9 SER B 345 LYS B 351 1 7 HELIX 19 AC1 GLU B 354 GLN B 358 5 5 HELIX 20 AC2 PRO B 359 ARG B 380 1 22 HELIX 21 AC3 ARG B 388 ALA B 390 5 3 HELIX 22 AC4 GLY B 406 ILE B 411 5 6 HELIX 23 AC5 ASN B 414 ARG B 419 1 6 HELIX 24 AC6 PRO B 425 THR B 429 5 5 HELIX 25 AC7 ALA B 430 GLY B 437 1 8 HELIX 26 AC8 THR B 440 THR B 457 1 18 HELIX 27 AC9 SER B 467 ARG B 477 1 11 HELIX 28 AD1 PRO B 488 TRP B 499 1 12 HELIX 29 AD2 ARG B 502 ARG B 506 5 5 HELIX 30 AD3 THR B 508 THR B 523 1 16 SHEET 1 AA1 5 LEU A 267 ALA A 275 0 SHEET 2 AA1 5 GLY A 279 TYR A 286 -1 O MET A 283 N LYS A 271 SHEET 3 AA1 5 THR A 290 MET A 297 -1 O THR A 290 N TYR A 286 SHEET 4 AA1 5 TYR A 335 GLU A 339 -1 O ILE A 336 N LYS A 295 SHEET 5 AA1 5 LEU A 325 VAL A 329 -1 N ALA A 327 O ILE A 337 SHEET 1 AA2 2 ILE A 392 VAL A 394 0 SHEET 2 AA2 2 CYS A 400 ILE A 402 -1 O LYS A 401 N LEU A 393 SHEET 1 AA3 5 LEU B 267 ALA B 275 0 SHEET 2 AA3 5 GLY B 279 TYR B 286 -1 O MET B 283 N LYS B 271 SHEET 3 AA3 5 THR B 290 MET B 297 -1 O THR B 290 N TYR B 286 SHEET 4 AA3 5 TYR B 335 THR B 338 -1 O ILE B 336 N LYS B 295 SHEET 5 AA3 5 LEU B 325 VAL B 329 -1 N ALA B 327 O ILE B 337 SHEET 1 AA4 2 ILE B 392 VAL B 394 0 SHEET 2 AA4 2 CYS B 400 ILE B 402 -1 O LYS B 401 N LEU B 393 CISPEP 1 GLU A 332 PRO A 333 0 -5.36 CISPEP 2 GLU B 332 PRO B 333 0 -5.13 SITE 1 AC1 12 LEU A 273 VAL A 281 ALA A 293 LYS A 295 SITE 2 AC1 12 THR A 338 GLU A 339 MET A 341 ASP A 348 SITE 3 AC1 12 LEU A 393 ASP A 404 HOH A 770 HOH A 825 SITE 1 AC2 14 LEU B 273 VAL B 281 ALA B 293 LYS B 295 SITE 2 AC2 14 MET B 314 THR B 338 GLU B 339 MET B 341 SITE 3 AC2 14 ASP B 348 LEU B 393 ASP B 404 PHE B 405 SITE 4 AC2 14 HOH B 799 HOH B 823 CRYST1 42.810 48.020 78.010 87.59 83.09 63.59 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023359 -0.011601 -0.002981 0.00000 SCALE2 0.000000 0.023251 0.000300 0.00000 SCALE3 0.000000 0.000000 0.012914 0.00000