HEADER IMMUNE SYSTEM 28-MAR-18 5ZLN TITLE CRYSTAL STRUCTURE OF MOUSE TLR9 IN COMPLEX WITH TWO DNAS (CPG DNA AND TITLE 2 TCGCCA DNA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 9; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 26-818; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*AP*GP*GP*CP*GP*TP*TP*TP*TP*T)-3'); COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(*TP*CP*GP*C)-3'); COMPND 13 CHAIN: E, F; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TLR9; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS INNATE IMMUNITY, TOLL-LIKE RECEPTOR, LEUCINE-RICH REPEAT, DNA KEYWDS 2 BINDING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR H.ISHIDA,U.OHTO,T.SHIMIZU REVDAT 5 22-NOV-23 5ZLN 1 HETSYN REVDAT 4 29-JUL-20 5ZLN 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 12-SEP-18 5ZLN 1 JRNL REVDAT 2 08-AUG-18 5ZLN 1 JRNL REVDAT 1 25-APR-18 5ZLN 0 JRNL AUTH H.ISHIDA,U.OHTO,T.SHIBATA,K.MIYAKE,T.SHIMIZU JRNL TITL STRUCTURAL BASIS FOR SPECIES-SPECIFIC ACTIVATION OF MOUSE JRNL TITL 2 TOLL-LIKE RECEPTOR 9 JRNL REF FEBS LETT. V. 592 2636 2018 JRNL REFN ISSN 1873-3468 JRNL PMID 29961984 JRNL DOI 10.1002/1873-3468.13176 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0218 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 97358 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4986 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6980 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2930 REMARK 3 BIN FREE R VALUE SET COUNT : 335 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11888 REMARK 3 NUCLEIC ACID ATOMS : 560 REMARK 3 HETEROGEN ATOMS : 397 REMARK 3 SOLVENT ATOMS : 601 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.249 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.208 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.161 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.117 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13217 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 11920 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18103 ; 1.594 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 27755 ; 0.898 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1500 ; 6.838 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 538 ;39.228 ;23.978 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2101 ;15.195 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 66 ;17.434 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2117 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 13925 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2616 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6012 ; 2.595 ; 3.793 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 6011 ; 2.582 ; 3.792 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7508 ; 3.930 ; 5.680 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 7509 ; 3.932 ; 5.682 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7205 ; 3.881 ; 4.559 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 7184 ; 3.867 ; 4.548 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 10565 ; 6.177 ; 6.681 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 14157 ; 7.532 ;45.511 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 14087 ; 7.534 ;45.468 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 28 810 B 28 810 23786 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5ZLN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1300007282. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102418 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 49.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3WPF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%(W/V) PEG4000, 0.15M AMMONIUM REMARK 280 SULFATE, 0.1M HEPES-NAOH PH7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 57.15300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.39900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.07050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.39900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.15300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.07050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 62750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K, L, M, N, O, P, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 26 REMARK 465 GLY A 27 REMARK 465 LEU A 433 REMARK 465 SER A 434 REMARK 465 GLU A 435 REMARK 465 ALA A 436 REMARK 465 THR A 437 REMARK 465 PRO A 438 REMARK 465 GLU A 439 REMARK 465 GLU A 440 REMARK 465 ALA A 441 REMARK 465 ASP A 442 REMARK 465 ASP A 443 REMARK 465 ALA A 444 REMARK 465 GLU A 445 REMARK 465 GLN A 446 REMARK 465 GLU A 447 REMARK 465 GLU A 448 REMARK 465 LEU A 449 REMARK 465 LEU A 450 REMARK 465 SER A 451 REMARK 465 ALA A 452 REMARK 465 ASP A 453 REMARK 465 PRO A 454 REMARK 465 HIS A 455 REMARK 465 PRO A 456 REMARK 465 ALA A 457 REMARK 465 PRO A 458 REMARK 465 LEU A 459 REMARK 465 SER A 460 REMARK 465 THR A 461 REMARK 465 PRO A 462 REMARK 465 ALA A 463 REMARK 465 SER A 464 REMARK 465 LEU A 811 REMARK 465 ASP A 812 REMARK 465 GLU A 813 REMARK 465 VAL A 814 REMARK 465 LEU A 815 REMARK 465 SER A 816 REMARK 465 TRP A 817 REMARK 465 ASP A 818 REMARK 465 LEU B 26 REMARK 465 GLY B 27 REMARK 465 GLU B 435 REMARK 465 ALA B 436 REMARK 465 THR B 437 REMARK 465 PRO B 438 REMARK 465 GLU B 439 REMARK 465 GLU B 440 REMARK 465 ALA B 441 REMARK 465 ASP B 442 REMARK 465 ASP B 443 REMARK 465 ALA B 444 REMARK 465 GLU B 445 REMARK 465 GLN B 446 REMARK 465 GLU B 447 REMARK 465 GLU B 448 REMARK 465 LEU B 449 REMARK 465 LEU B 450 REMARK 465 SER B 451 REMARK 465 ALA B 452 REMARK 465 ASP B 453 REMARK 465 PRO B 454 REMARK 465 HIS B 455 REMARK 465 PRO B 456 REMARK 465 ALA B 457 REMARK 465 PRO B 458 REMARK 465 LEU B 459 REMARK 465 SER B 460 REMARK 465 THR B 461 REMARK 465 PRO B 462 REMARK 465 ALA B 463 REMARK 465 SER B 464 REMARK 465 LEU B 811 REMARK 465 ASP B 812 REMARK 465 GLU B 813 REMARK 465 VAL B 814 REMARK 465 LEU B 815 REMARK 465 SER B 816 REMARK 465 TRP B 817 REMARK 465 ASP B 818 REMARK 465 DC E 5 REMARK 465 DA E 6 REMARK 465 DC F 5 REMARK 465 DA F 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O CYS A 767 O LEU A 807 2.06 REMARK 500 O HOH C 107 O HOH C 109 2.10 REMARK 500 O HOH A 1137 O HOH A 1280 2.15 REMARK 500 O CYS B 767 O LEU B 807 2.15 REMARK 500 OG SER B 541 O HOH B 1001 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 354 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG A 377 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 377 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 645 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG B 55 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG B 55 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 377 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 645 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 662 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 662 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 800 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 31 -25.07 97.35 REMARK 500 PRO A 39 -104.09 -32.31 REMARK 500 ALA A 58 42.24 -88.46 REMARK 500 THR A 153 -167.71 -115.21 REMARK 500 CYS A 178 78.59 -155.79 REMARK 500 LEU A 206 48.48 -140.17 REMARK 500 ASN A 230 -152.97 -112.16 REMARK 500 LEU A 243 53.87 -95.40 REMARK 500 PHE A 319 52.22 -118.60 REMARK 500 THR A 327 151.60 -47.24 REMARK 500 ASN A 344 58.85 -92.50 REMARK 500 PHE A 375 86.06 79.99 REMARK 500 ALA A 416 21.89 -150.03 REMARK 500 ASN A 425 -167.93 -128.89 REMARK 500 PHE A 476 109.42 -163.86 REMARK 500 ASN A 483 -167.31 -119.57 REMARK 500 ASN A 507 -153.96 -104.18 REMARK 500 GLN A 514 26.87 -154.79 REMARK 500 ASN A 532 -160.06 -128.02 REMARK 500 TYR A 537 -60.73 -153.21 REMARK 500 SER A 541 120.32 -33.25 REMARK 500 ASN A 556 51.54 -108.23 REMARK 500 HIS A 589 -13.77 -148.65 REMARK 500 ASN A 609 -163.68 -122.33 REMARK 500 GLU A 617 59.67 -99.97 REMARK 500 ASN A 664 -161.22 -108.18 REMARK 500 ASN A 688 -158.83 -96.73 REMARK 500 ASN A 712 -152.50 -106.73 REMARK 500 ASN A 736 -160.25 -126.17 REMARK 500 ALA A 769 124.30 -38.16 REMARK 500 ALA B 31 -12.14 76.19 REMARK 500 THR B 153 -167.47 -116.23 REMARK 500 CYS B 178 79.24 -154.85 REMARK 500 LEU B 206 48.17 -140.49 REMARK 500 ASN B 230 -150.88 -112.40 REMARK 500 LEU B 243 55.77 -95.66 REMARK 500 LEU B 307 78.89 -107.47 REMARK 500 ASN B 318 -164.76 -100.81 REMARK 500 PHE B 319 50.68 -117.50 REMARK 500 PHE B 375 86.01 78.82 REMARK 500 ALA B 416 21.14 -145.02 REMARK 500 PHE B 476 110.09 -163.57 REMARK 500 ASN B 483 -166.27 -119.78 REMARK 500 ASN B 507 -154.18 -105.15 REMARK 500 GLN B 514 25.96 -153.99 REMARK 500 ASN B 532 -160.08 -128.78 REMARK 500 TYR B 537 -57.93 -155.81 REMARK 500 SER B 541 121.77 -33.52 REMARK 500 PHE B 542 -0.59 70.26 REMARK 500 ASN B 556 50.36 -107.58 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 5ZLN A 26 818 UNP Q9EQU3 TLR9_MOUSE 26 818 DBREF 5ZLN B 26 818 UNP Q9EQU3 TLR9_MOUSE 26 818 DBREF 5ZLN C 1 10 PDB 5ZLN 5ZLN 1 10 DBREF 5ZLN D 1 10 PDB 5ZLN 5ZLN 1 10 DBREF 5ZLN E 1 6 PDB 5ZLN 5ZLN 1 6 DBREF 5ZLN F 1 6 PDB 5ZLN 5ZLN 1 6 SEQADV 5ZLN MET A 310 UNP Q9EQU3 LEU 310 ENGINEERED MUTATION SEQADV 5ZLN GLN A 325 UNP Q9EQU3 THR 325 ENGINEERED MUTATION SEQADV 5ZLN SER A 378 UNP Q9EQU3 LEU 378 ENGINEERED MUTATION SEQADV 5ZLN GLN A 495 UNP Q9EQU3 ASN 495 ENGINEERED MUTATION SEQADV 5ZLN GLN A 514 UNP Q9EQU3 ASN 514 ENGINEERED MUTATION SEQADV 5ZLN ALA A 573 UNP Q9EQU3 THR 573 ENGINEERED MUTATION SEQADV 5ZLN HIS A 579 UNP Q9EQU3 GLN 579 ENGINEERED MUTATION SEQADV 5ZLN GLN A 670 UNP Q9EQU3 ASN 670 ENGINEERED MUTATION SEQADV 5ZLN MET B 310 UNP Q9EQU3 LEU 310 ENGINEERED MUTATION SEQADV 5ZLN GLN B 325 UNP Q9EQU3 THR 325 ENGINEERED MUTATION SEQADV 5ZLN SER B 378 UNP Q9EQU3 LEU 378 ENGINEERED MUTATION SEQADV 5ZLN GLN B 495 UNP Q9EQU3 ASN 495 ENGINEERED MUTATION SEQADV 5ZLN GLN B 514 UNP Q9EQU3 ASN 514 ENGINEERED MUTATION SEQADV 5ZLN ALA B 573 UNP Q9EQU3 THR 573 ENGINEERED MUTATION SEQADV 5ZLN HIS B 579 UNP Q9EQU3 GLN 579 ENGINEERED MUTATION SEQADV 5ZLN GLN B 670 UNP Q9EQU3 ASN 670 ENGINEERED MUTATION SEQRES 1 A 793 LEU GLY THR LEU PRO ALA PHE LEU PRO CYS GLU LEU LYS SEQRES 2 A 793 PRO HIS GLY LEU VAL ASP CYS ASN TRP LEU PHE LEU LYS SEQRES 3 A 793 SER VAL PRO ARG PHE SER ALA ALA ALA SER CYS SER ASN SEQRES 4 A 793 ILE THR ARG LEU SER LEU ILE SER ASN ARG ILE HIS HIS SEQRES 5 A 793 LEU HIS ASN SER ASP PHE VAL HIS LEU SER ASN LEU ARG SEQRES 6 A 793 GLN LEU ASN LEU LYS TRP ASN CYS PRO PRO THR GLY LEU SEQRES 7 A 793 SER PRO LEU HIS PHE SER CYS HIS MET THR ILE GLU PRO SEQRES 8 A 793 ARG THR PHE LEU ALA MET ARG THR LEU GLU GLU LEU ASN SEQRES 9 A 793 LEU SER TYR ASN GLY ILE THR THR VAL PRO ARG LEU PRO SEQRES 10 A 793 SER SER LEU VAL ASN LEU SER LEU SER HIS THR ASN ILE SEQRES 11 A 793 LEU VAL LEU ASP ALA ASN SER LEU ALA GLY LEU TYR SER SEQRES 12 A 793 LEU ARG VAL LEU PHE MET ASP GLY ASN CYS TYR TYR LYS SEQRES 13 A 793 ASN PRO CYS THR GLY ALA VAL LYS VAL THR PRO GLY ALA SEQRES 14 A 793 LEU LEU GLY LEU SER ASN LEU THR HIS LEU SER LEU LYS SEQRES 15 A 793 TYR ASN ASN LEU THR LYS VAL PRO ARG GLN LEU PRO PRO SEQRES 16 A 793 SER LEU GLU TYR LEU LEU VAL SER TYR ASN LEU ILE VAL SEQRES 17 A 793 LYS LEU GLY PRO GLU ASP LEU ALA ASN LEU THR SER LEU SEQRES 18 A 793 ARG VAL LEU ASP VAL GLY GLY ASN CYS ARG ARG CYS ASP SEQRES 19 A 793 HIS ALA PRO ASN PRO CYS ILE GLU CYS GLY GLN LYS SER SEQRES 20 A 793 LEU HIS LEU HIS PRO GLU THR PHE HIS HIS LEU SER HIS SEQRES 21 A 793 LEU GLU GLY LEU VAL LEU LYS ASP SER SER LEU HIS THR SEQRES 22 A 793 LEU ASN SER SER TRP PHE GLN GLY LEU VAL ASN MET SER SEQRES 23 A 793 VAL LEU ASP LEU SER GLU ASN PHE LEU TYR GLU SER ILE SEQRES 24 A 793 GLN HIS THR ASN ALA PHE GLN ASN LEU THR ARG LEU ARG SEQRES 25 A 793 LYS LEU ASN LEU SER PHE ASN TYR ARG LYS LYS VAL SER SEQRES 26 A 793 PHE ALA ARG LEU HIS LEU ALA SER SER PHE LYS ASN LEU SEQRES 27 A 793 VAL SER LEU GLN GLU LEU ASN MET ASN GLY ILE PHE PHE SEQRES 28 A 793 ARG SER LEU ASN LYS TYR THR LEU ARG TRP LEU ALA ASP SEQRES 29 A 793 LEU PRO LYS LEU HIS THR LEU HIS LEU GLN MET ASN PHE SEQRES 30 A 793 ILE ASN GLN ALA GLN LEU SER ILE PHE GLY THR PHE ARG SEQRES 31 A 793 ALA LEU ARG PHE VAL ASP LEU SER ASP ASN ARG ILE SER SEQRES 32 A 793 GLY PRO SER THR LEU SER GLU ALA THR PRO GLU GLU ALA SEQRES 33 A 793 ASP ASP ALA GLU GLN GLU GLU LEU LEU SER ALA ASP PRO SEQRES 34 A 793 HIS PRO ALA PRO LEU SER THR PRO ALA SER LYS ASN PHE SEQRES 35 A 793 MET ASP ARG CYS LYS ASN PHE LYS PHE THR MET ASP LEU SEQRES 36 A 793 SER ARG ASN ASN LEU VAL THR ILE LYS PRO GLU MET PHE SEQRES 37 A 793 VAL GLN LEU SER ARG LEU GLN CYS LEU SER LEU SER HIS SEQRES 38 A 793 ASN SER ILE ALA GLN ALA VAL GLN GLY SER GLN PHE LEU SEQRES 39 A 793 PRO LEU THR ASN LEU GLN VAL LEU ASP LEU SER HIS ASN SEQRES 40 A 793 LYS LEU ASP LEU TYR HIS TRP LYS SER PHE SER GLU LEU SEQRES 41 A 793 PRO GLN LEU GLN ALA LEU ASP LEU SER TYR ASN SER GLN SEQRES 42 A 793 PRO PHE SER MET LYS GLY ILE GLY HIS ASN PHE SER PHE SEQRES 43 A 793 VAL ALA HIS LEU SER MET LEU HIS SER LEU SER LEU ALA SEQRES 44 A 793 HIS ASN ASP ILE HIS THR ARG VAL SER SER HIS LEU ASN SEQRES 45 A 793 SER ASN SER VAL ARG PHE LEU ASP PHE SER GLY ASN GLY SEQRES 46 A 793 MET GLY ARG MET TRP ASP GLU GLY GLY LEU TYR LEU HIS SEQRES 47 A 793 PHE PHE GLN GLY LEU SER GLY LEU LEU LYS LEU ASP LEU SEQRES 48 A 793 SER GLN ASN ASN LEU HIS ILE LEU ARG PRO GLN ASN LEU SEQRES 49 A 793 ASP ASN LEU PRO LYS SER LEU LYS LEU LEU SER LEU ARG SEQRES 50 A 793 ASP ASN TYR LEU SER PHE PHE GLN TRP THR SER LEU SER SEQRES 51 A 793 PHE LEU PRO ASN LEU GLU VAL LEU ASP LEU ALA GLY ASN SEQRES 52 A 793 GLN LEU LYS ALA LEU THR ASN GLY THR LEU PRO ASN GLY SEQRES 53 A 793 THR LEU LEU GLN LYS LEU ASP VAL SER SER ASN SER ILE SEQRES 54 A 793 VAL SER VAL VAL PRO ALA PHE PHE ALA LEU ALA VAL GLU SEQRES 55 A 793 LEU LYS GLU VAL ASN LEU SER HIS ASN ILE LEU LYS THR SEQRES 56 A 793 VAL ASP ARG SER TRP PHE GLY PRO ILE VAL MET ASN LEU SEQRES 57 A 793 THR VAL LEU ASP VAL ARG SER ASN PRO LEU HIS CYS ALA SEQRES 58 A 793 CYS GLY ALA ALA PHE VAL ASP LEU LEU LEU GLU VAL GLN SEQRES 59 A 793 THR LYS VAL PRO GLY LEU ALA ASN GLY VAL LYS CYS GLY SEQRES 60 A 793 SER PRO GLY GLN LEU GLN GLY ARG SER ILE PHE ALA GLN SEQRES 61 A 793 ASP LEU ARG LEU CYS LEU ASP GLU VAL LEU SER TRP ASP SEQRES 1 B 793 LEU GLY THR LEU PRO ALA PHE LEU PRO CYS GLU LEU LYS SEQRES 2 B 793 PRO HIS GLY LEU VAL ASP CYS ASN TRP LEU PHE LEU LYS SEQRES 3 B 793 SER VAL PRO ARG PHE SER ALA ALA ALA SER CYS SER ASN SEQRES 4 B 793 ILE THR ARG LEU SER LEU ILE SER ASN ARG ILE HIS HIS SEQRES 5 B 793 LEU HIS ASN SER ASP PHE VAL HIS LEU SER ASN LEU ARG SEQRES 6 B 793 GLN LEU ASN LEU LYS TRP ASN CYS PRO PRO THR GLY LEU SEQRES 7 B 793 SER PRO LEU HIS PHE SER CYS HIS MET THR ILE GLU PRO SEQRES 8 B 793 ARG THR PHE LEU ALA MET ARG THR LEU GLU GLU LEU ASN SEQRES 9 B 793 LEU SER TYR ASN GLY ILE THR THR VAL PRO ARG LEU PRO SEQRES 10 B 793 SER SER LEU VAL ASN LEU SER LEU SER HIS THR ASN ILE SEQRES 11 B 793 LEU VAL LEU ASP ALA ASN SER LEU ALA GLY LEU TYR SER SEQRES 12 B 793 LEU ARG VAL LEU PHE MET ASP GLY ASN CYS TYR TYR LYS SEQRES 13 B 793 ASN PRO CYS THR GLY ALA VAL LYS VAL THR PRO GLY ALA SEQRES 14 B 793 LEU LEU GLY LEU SER ASN LEU THR HIS LEU SER LEU LYS SEQRES 15 B 793 TYR ASN ASN LEU THR LYS VAL PRO ARG GLN LEU PRO PRO SEQRES 16 B 793 SER LEU GLU TYR LEU LEU VAL SER TYR ASN LEU ILE VAL SEQRES 17 B 793 LYS LEU GLY PRO GLU ASP LEU ALA ASN LEU THR SER LEU SEQRES 18 B 793 ARG VAL LEU ASP VAL GLY GLY ASN CYS ARG ARG CYS ASP SEQRES 19 B 793 HIS ALA PRO ASN PRO CYS ILE GLU CYS GLY GLN LYS SER SEQRES 20 B 793 LEU HIS LEU HIS PRO GLU THR PHE HIS HIS LEU SER HIS SEQRES 21 B 793 LEU GLU GLY LEU VAL LEU LYS ASP SER SER LEU HIS THR SEQRES 22 B 793 LEU ASN SER SER TRP PHE GLN GLY LEU VAL ASN MET SER SEQRES 23 B 793 VAL LEU ASP LEU SER GLU ASN PHE LEU TYR GLU SER ILE SEQRES 24 B 793 GLN HIS THR ASN ALA PHE GLN ASN LEU THR ARG LEU ARG SEQRES 25 B 793 LYS LEU ASN LEU SER PHE ASN TYR ARG LYS LYS VAL SER SEQRES 26 B 793 PHE ALA ARG LEU HIS LEU ALA SER SER PHE LYS ASN LEU SEQRES 27 B 793 VAL SER LEU GLN GLU LEU ASN MET ASN GLY ILE PHE PHE SEQRES 28 B 793 ARG SER LEU ASN LYS TYR THR LEU ARG TRP LEU ALA ASP SEQRES 29 B 793 LEU PRO LYS LEU HIS THR LEU HIS LEU GLN MET ASN PHE SEQRES 30 B 793 ILE ASN GLN ALA GLN LEU SER ILE PHE GLY THR PHE ARG SEQRES 31 B 793 ALA LEU ARG PHE VAL ASP LEU SER ASP ASN ARG ILE SER SEQRES 32 B 793 GLY PRO SER THR LEU SER GLU ALA THR PRO GLU GLU ALA SEQRES 33 B 793 ASP ASP ALA GLU GLN GLU GLU LEU LEU SER ALA ASP PRO SEQRES 34 B 793 HIS PRO ALA PRO LEU SER THR PRO ALA SER LYS ASN PHE SEQRES 35 B 793 MET ASP ARG CYS LYS ASN PHE LYS PHE THR MET ASP LEU SEQRES 36 B 793 SER ARG ASN ASN LEU VAL THR ILE LYS PRO GLU MET PHE SEQRES 37 B 793 VAL GLN LEU SER ARG LEU GLN CYS LEU SER LEU SER HIS SEQRES 38 B 793 ASN SER ILE ALA GLN ALA VAL GLN GLY SER GLN PHE LEU SEQRES 39 B 793 PRO LEU THR ASN LEU GLN VAL LEU ASP LEU SER HIS ASN SEQRES 40 B 793 LYS LEU ASP LEU TYR HIS TRP LYS SER PHE SER GLU LEU SEQRES 41 B 793 PRO GLN LEU GLN ALA LEU ASP LEU SER TYR ASN SER GLN SEQRES 42 B 793 PRO PHE SER MET LYS GLY ILE GLY HIS ASN PHE SER PHE SEQRES 43 B 793 VAL ALA HIS LEU SER MET LEU HIS SER LEU SER LEU ALA SEQRES 44 B 793 HIS ASN ASP ILE HIS THR ARG VAL SER SER HIS LEU ASN SEQRES 45 B 793 SER ASN SER VAL ARG PHE LEU ASP PHE SER GLY ASN GLY SEQRES 46 B 793 MET GLY ARG MET TRP ASP GLU GLY GLY LEU TYR LEU HIS SEQRES 47 B 793 PHE PHE GLN GLY LEU SER GLY LEU LEU LYS LEU ASP LEU SEQRES 48 B 793 SER GLN ASN ASN LEU HIS ILE LEU ARG PRO GLN ASN LEU SEQRES 49 B 793 ASP ASN LEU PRO LYS SER LEU LYS LEU LEU SER LEU ARG SEQRES 50 B 793 ASP ASN TYR LEU SER PHE PHE GLN TRP THR SER LEU SER SEQRES 51 B 793 PHE LEU PRO ASN LEU GLU VAL LEU ASP LEU ALA GLY ASN SEQRES 52 B 793 GLN LEU LYS ALA LEU THR ASN GLY THR LEU PRO ASN GLY SEQRES 53 B 793 THR LEU LEU GLN LYS LEU ASP VAL SER SER ASN SER ILE SEQRES 54 B 793 VAL SER VAL VAL PRO ALA PHE PHE ALA LEU ALA VAL GLU SEQRES 55 B 793 LEU LYS GLU VAL ASN LEU SER HIS ASN ILE LEU LYS THR SEQRES 56 B 793 VAL ASP ARG SER TRP PHE GLY PRO ILE VAL MET ASN LEU SEQRES 57 B 793 THR VAL LEU ASP VAL ARG SER ASN PRO LEU HIS CYS ALA SEQRES 58 B 793 CYS GLY ALA ALA PHE VAL ASP LEU LEU LEU GLU VAL GLN SEQRES 59 B 793 THR LYS VAL PRO GLY LEU ALA ASN GLY VAL LYS CYS GLY SEQRES 60 B 793 SER PRO GLY GLN LEU GLN GLY ARG SER ILE PHE ALA GLN SEQRES 61 B 793 ASP LEU ARG LEU CYS LEU ASP GLU VAL LEU SER TRP ASP SEQRES 1 C 10 DA DG DG DC DG DT DT DT DT DT SEQRES 1 D 10 DA DG DG DC DG DT DT DT DT DT SEQRES 1 E 6 DT DC DG DC DC DA SEQRES 1 F 6 DT DC DG DC DC DA HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET NAG K 1 14 HET NAG K 2 14 HET NAG L 1 14 HET NAG L 2 14 HET NAG M 1 14 HET NAG M 2 14 HET NAG N 1 14 HET NAG N 2 14 HET NAG O 1 14 HET NAG O 2 14 HET NAG P 1 14 HET NAG P 2 14 HET NAG Q 1 14 HET NAG Q 2 14 HET NAG A 904 14 HET SO4 A 916 5 HET SO4 A 917 5 HET SO4 A 918 5 HET SO4 A 919 5 HET NAG B 901 14 HET NAG B 902 14 HET SO4 B 913 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 7 NAG 25(C8 H15 N O6) FORMUL 7 BMA 2(C6 H12 O6) FORMUL 19 SO4 5(O4 S 2-) FORMUL 26 HOH *601(H2 O) HELIX 1 AA1 PHE A 83 SER A 87 5 5 HELIX 2 AA2 PRO A 100 SER A 104 5 5 HELIX 3 AA3 GLY A 236 ALA A 241 5 6 HELIX 4 AA4 ARG A 257 ALA A 261 5 5 HELIX 5 AA5 ASN A 300 GLN A 305 5 6 HELIX 6 AA6 GLU A 322 THR A 327 1 6 HELIX 7 AA7 ALA A 357 LEU A 363 5 7 HELIX 8 AA8 LEU A 384 ALA A 388 5 5 HELIX 9 AA9 LEU A 408 THR A 413 5 6 HELIX 10 AB1 ASN A 466 LYS A 472 5 7 HELIX 11 AB2 LYS A 489 VAL A 494 5 6 HELIX 12 AB3 SER A 557 MET A 562 5 6 HELIX 13 AB4 PHE A 569 LEU A 575 5 7 HELIX 14 AB5 GLY A 610 TRP A 615 1 6 HELIX 15 AB6 ARG A 645 ASN A 651 1 7 HELIX 16 AB7 GLN A 670 LEU A 677 5 8 HELIX 17 AB8 ASP A 742 LEU A 753 5 12 HELIX 18 AB9 ALA A 770 VAL A 778 1 9 HELIX 19 AC1 GLN A 779 VAL A 782 5 4 HELIX 20 AC2 GLY A 784 VAL A 789 1 6 HELIX 21 AC3 PRO A 794 GLN A 798 5 5 HELIX 22 AC4 PHE B 83 SER B 87 5 5 HELIX 23 AC5 PRO B 100 SER B 104 5 5 HELIX 24 AC6 GLY B 236 ALA B 241 5 6 HELIX 25 AC7 ARG B 257 ALA B 261 5 5 HELIX 26 AC8 ASN B 300 GLN B 305 5 6 HELIX 27 AC9 GLU B 322 THR B 327 1 6 HELIX 28 AD1 ALA B 357 LEU B 363 5 7 HELIX 29 AD2 LEU B 384 ALA B 388 5 5 HELIX 30 AD3 LEU B 408 THR B 413 5 6 HELIX 31 AD4 ASN B 466 LYS B 472 5 7 HELIX 32 AD5 LYS B 489 VAL B 494 5 6 HELIX 33 AD6 SER B 557 MET B 562 5 6 HELIX 34 AD7 PHE B 569 LEU B 575 5 7 HELIX 35 AD8 GLY B 610 TRP B 615 1 6 HELIX 36 AD9 ARG B 645 ASN B 651 1 7 HELIX 37 AE1 GLN B 670 LEU B 677 5 8 HELIX 38 AE2 ASP B 742 LEU B 753 5 12 HELIX 39 AE3 ALA B 770 VAL B 778 1 9 HELIX 40 AE4 GLN B 779 VAL B 782 5 4 HELIX 41 AE5 GLY B 784 VAL B 789 1 6 HELIX 42 AE6 PRO B 794 GLN B 798 5 5 SHEET 1 AA128 GLU A 36 LEU A 37 0 SHEET 2 AA128 LEU A 42 ASP A 44 -1 O ASP A 44 N GLU A 36 SHEET 3 AA128 ARG A 67 SER A 69 1 O ARG A 67 N VAL A 43 SHEET 4 AA128 GLN A 91 ASN A 93 1 O GLN A 91 N LEU A 68 SHEET 5 AA128 GLU A 127 ASN A 129 1 O GLU A 127 N LEU A 92 SHEET 6 AA128 ASN A 147 SER A 149 1 O ASN A 147 N LEU A 128 SHEET 7 AA128 VAL A 171 PHE A 173 1 O VAL A 171 N LEU A 148 SHEET 8 AA128 HIS A 203 SER A 205 1 O HIS A 203 N LEU A 172 SHEET 9 AA128 TYR A 224 LEU A 226 1 O TYR A 224 N LEU A 204 SHEET 10 AA128 VAL A 248 ASP A 250 1 O ASP A 250 N LEU A 225 SHEET 11 AA128 GLY A 288 VAL A 290 1 O GLY A 288 N LEU A 249 SHEET 12 AA128 VAL A 312 ASP A 314 1 O VAL A 312 N LEU A 289 SHEET 13 AA128 LYS A 338 ASN A 340 1 O LYS A 338 N LEU A 313 SHEET 14 AA128 GLU A 368 ASN A 370 1 O ASN A 370 N LEU A 339 SHEET 15 AA128 THR A 395 HIS A 397 1 O THR A 395 N LEU A 369 SHEET 16 AA128 PHE A 419 ASP A 421 1 O ASP A 421 N LEU A 396 SHEET 17 AA128 THR A 477 ASP A 479 1 O ASP A 479 N VAL A 420 SHEET 18 AA128 CYS A 501 SER A 503 1 O CYS A 501 N MET A 478 SHEET 19 AA128 VAL A 526 ASP A 528 1 O ASP A 528 N LEU A 502 SHEET 20 AA128 ALA A 550 ASP A 552 1 O ALA A 550 N LEU A 527 SHEET 21 AA128 SER A 580 SER A 582 1 O SER A 580 N LEU A 551 SHEET 22 AA128 PHE A 603 ASP A 605 1 O PHE A 603 N LEU A 581 SHEET 23 AA128 LYS A 633 ASP A 635 1 O LYS A 633 N LEU A 604 SHEET 24 AA128 LEU A 658 SER A 660 1 O LEU A 658 N LEU A 634 SHEET 25 AA128 VAL A 682 ASP A 684 1 O VAL A 682 N LEU A 659 SHEET 26 AA128 LYS A 706 ASP A 708 1 O ASP A 708 N LEU A 683 SHEET 27 AA128 GLU A 730 ASN A 732 1 O GLU A 730 N LEU A 707 SHEET 28 AA128 VAL A 755 ASP A 757 1 O VAL A 755 N VAL A 731 SHEET 1 AA2 2 HIS A 77 LEU A 78 0 SHEET 2 AA2 2 THR A 113 ILE A 114 1 O THR A 113 N LEU A 78 SHEET 1 AA3 2 VAL A 157 LEU A 158 0 SHEET 2 AA3 2 LYS A 189 VAL A 190 1 O LYS A 189 N LEU A 158 SHEET 1 AA4 2 LYS A 234 LEU A 235 0 SHEET 2 AA4 2 HIS A 274 LEU A 275 1 O HIS A 274 N LEU A 235 SHEET 1 AA5 2 SER A 378 LEU A 379 0 SHEET 2 AA5 2 GLN A 405 ALA A 406 1 O GLN A 405 N LEU A 379 SHEET 1 AA6 2 ASN A 597 SER A 598 0 SHEET 2 AA6 2 GLY A 627 LEU A 628 1 O GLY A 627 N SER A 598 SHEET 1 AA7 2 LEU A 763 HIS A 764 0 SHEET 2 AA7 2 CYS A 791 SER A 793 1 O GLY A 792 N LEU A 763 SHEET 1 AA828 GLU B 36 LEU B 37 0 SHEET 2 AA828 LEU B 42 ASP B 44 -1 O ASP B 44 N GLU B 36 SHEET 3 AA828 ARG B 67 SER B 69 1 O ARG B 67 N VAL B 43 SHEET 4 AA828 GLN B 91 ASN B 93 1 O GLN B 91 N LEU B 68 SHEET 5 AA828 GLU B 127 ASN B 129 1 O GLU B 127 N LEU B 92 SHEET 6 AA828 ASN B 147 SER B 149 1 O ASN B 147 N LEU B 128 SHEET 7 AA828 VAL B 171 PHE B 173 1 O VAL B 171 N LEU B 148 SHEET 8 AA828 HIS B 203 SER B 205 1 O HIS B 203 N LEU B 172 SHEET 9 AA828 TYR B 224 LEU B 226 1 O TYR B 224 N LEU B 204 SHEET 10 AA828 VAL B 248 ASP B 250 1 O ASP B 250 N LEU B 225 SHEET 11 AA828 GLY B 288 VAL B 290 1 O GLY B 288 N LEU B 249 SHEET 12 AA828 VAL B 312 ASP B 314 1 O VAL B 312 N LEU B 289 SHEET 13 AA828 LYS B 338 ASN B 340 1 O LYS B 338 N LEU B 313 SHEET 14 AA828 GLU B 368 ASN B 370 1 O ASN B 370 N LEU B 339 SHEET 15 AA828 THR B 395 HIS B 397 1 O THR B 395 N LEU B 369 SHEET 16 AA828 PHE B 419 ASP B 421 1 O ASP B 421 N LEU B 396 SHEET 17 AA828 THR B 477 ASP B 479 1 O ASP B 479 N VAL B 420 SHEET 18 AA828 CYS B 501 SER B 503 1 O CYS B 501 N MET B 478 SHEET 19 AA828 VAL B 526 ASP B 528 1 O ASP B 528 N LEU B 502 SHEET 20 AA828 ALA B 550 ASP B 552 1 O ALA B 550 N LEU B 527 SHEET 21 AA828 SER B 580 SER B 582 1 O SER B 580 N LEU B 551 SHEET 22 AA828 PHE B 603 ASP B 605 1 O PHE B 603 N LEU B 581 SHEET 23 AA828 LYS B 633 ASP B 635 1 O LYS B 633 N LEU B 604 SHEET 24 AA828 LEU B 658 SER B 660 1 O LEU B 658 N LEU B 634 SHEET 25 AA828 VAL B 682 ASP B 684 1 O VAL B 682 N LEU B 659 SHEET 26 AA828 LYS B 706 ASP B 708 1 O LYS B 706 N LEU B 683 SHEET 27 AA828 GLU B 730 ASN B 732 1 O GLU B 730 N LEU B 707 SHEET 28 AA828 VAL B 755 ASP B 757 1 O VAL B 755 N VAL B 731 SHEET 1 AA9 2 HIS B 77 LEU B 78 0 SHEET 2 AA9 2 THR B 113 ILE B 114 1 O THR B 113 N LEU B 78 SHEET 1 AB1 2 VAL B 157 LEU B 158 0 SHEET 2 AB1 2 LYS B 189 VAL B 190 1 O LYS B 189 N LEU B 158 SHEET 1 AB2 2 LYS B 234 LEU B 235 0 SHEET 2 AB2 2 HIS B 274 LEU B 275 1 O HIS B 274 N LEU B 235 SHEET 1 AB3 2 SER B 378 LEU B 379 0 SHEET 2 AB3 2 GLN B 405 ALA B 406 1 O GLN B 405 N LEU B 379 SHEET 1 AB4 2 ASN B 597 SER B 598 0 SHEET 2 AB4 2 GLY B 627 LEU B 628 1 O GLY B 627 N SER B 598 SHEET 1 AB5 2 LEU B 763 HIS B 764 0 SHEET 2 AB5 2 CYS B 791 SER B 793 1 O GLY B 792 N LEU B 763 SSBOND 1 CYS A 35 CYS A 45 1555 1555 2.05 SSBOND 2 CYS A 98 CYS A 110 1555 1555 2.04 SSBOND 3 CYS A 178 CYS A 184 1555 1555 2.13 SSBOND 4 CYS A 255 CYS A 268 1555 1555 2.06 SSBOND 5 CYS A 258 CYS A 265 1555 1555 2.08 SSBOND 6 CYS A 471 CYS A 501 1555 1555 2.07 SSBOND 7 CYS A 765 CYS A 791 1555 1555 2.04 SSBOND 8 CYS A 767 CYS A 810 1555 1555 2.04 SSBOND 9 CYS B 35 CYS B 45 1555 1555 2.01 SSBOND 10 CYS B 98 CYS B 110 1555 1555 2.06 SSBOND 11 CYS B 178 CYS B 184 1555 1555 2.08 SSBOND 12 CYS B 255 CYS B 268 1555 1555 2.05 SSBOND 13 CYS B 258 CYS B 265 1555 1555 2.07 SSBOND 14 CYS B 471 CYS B 501 1555 1555 2.07 SSBOND 15 CYS B 765 CYS B 791 1555 1555 2.03 SSBOND 16 CYS B 767 CYS B 810 1555 1555 2.06 LINK ND2 ASN A 210 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN A 300 C1 NAG A 904 1555 1555 1.47 LINK ND2 ASN A 309 C1 NAG H 1 1555 1555 1.42 LINK ND2 ASN A 332 C1 NAG I 1 1555 1555 1.43 LINK ND2 ASN A 568 C1 NAG J 1 1555 1555 1.44 LINK ND2 ASN A 695 C1 NAG K 1 1555 1555 1.45 LINK ND2 ASN A 732 C1 NAG L 1 1555 1555 1.43 LINK ND2 ASN B 210 C1 NAG B 901 1555 1555 1.47 LINK ND2 ASN B 300 C1 NAG B 902 1555 1555 1.46 LINK ND2 ASN B 309 C1 NAG M 1 1555 1555 1.44 LINK ND2 ASN B 332 C1 NAG N 1 1555 1555 1.44 LINK ND2 ASN B 568 C1 NAG O 1 1555 1555 1.45 LINK ND2 ASN B 695 C1 NAG P 1 1555 1555 1.41 LINK ND2 ASN B 732 C1 NAG Q 1 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.43 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.47 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.46 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.46 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.45 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.46 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.44 LINK O4 NAG M 1 C1 NAG M 2 1555 1555 1.45 LINK O4 NAG N 1 C1 NAG N 2 1555 1555 1.46 LINK O4 NAG O 1 C1 NAG O 2 1555 1555 1.45 LINK O4 NAG P 1 C1 NAG P 2 1555 1555 1.45 LINK O4 NAG Q 1 C1 NAG Q 2 1555 1555 1.45 CISPEP 1 LEU A 33 PRO A 34 0 5.07 CISPEP 2 SER A 793 PRO A 794 0 -1.76 CISPEP 3 LEU B 33 PRO B 34 0 2.06 CISPEP 4 SER B 793 PRO B 794 0 -2.44 CRYST1 114.306 128.141 156.798 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008748 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007804 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006378 0.00000