HEADER TRANSCRIPTION 02-APR-18 5ZMA TITLE STRUCTURAL BASIS FOR AN ALLOSTERIC EYA2 PHOSPHATASE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: EYES ABSENT HOMOLOG 2; COMPND 3 CHAIN: B, A, C; COMPND 4 EC: 3.1.3.48; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EYA2, EAB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EYA2, EYES ABSENT PROTEIN, PHOSPHATASE, TRANSCRIPTION COACTIVATOR, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.ANANTHARAJAN,A.E.JANSSON,C.KANG REVDAT 4 22-NOV-23 5ZMA 1 REMARK REVDAT 3 18-SEP-19 5ZMA 1 JRNL REVDAT 2 28-AUG-19 5ZMA 1 JRNL REVDAT 1 05-JUN-19 5ZMA 0 JRNL AUTH J.ANANTHARAJAN,H.ZHOU,L.ZHANG,T.HOTZ,M.Y.VINCENT, JRNL AUTH 2 M.A.BLEVINS,A.E.JANSSON,J.W.L.KUAN,E.Y.NG,Y.K.YEO, JRNL AUTH 3 N.BABURAJENDRAN,G.LIN,A.W.HUNG,J.JOY,S.PATNAIK,J.MARUGAN, JRNL AUTH 4 P.RUDRA,D.GHOSH,J.HILL,T.H.KELLER,R.ZHAO,H.L.FORD,C.KANG JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSES OF AN ALLOSTERIC EYA2 JRNL TITL 2 PHOSPHATASE INHIBITOR THAT HAS ON-TARGET EFFECTS IN HUMAN JRNL TITL 3 LUNG CANCER CELLS. JRNL REF MOL.CANCER THER. V. 18 1484 2019 JRNL REFN ESSN 1538-8514 JRNL PMID 31285279 JRNL DOI 10.1158/1535-7163.MCT-18-1239 REMARK 2 REMARK 2 RESOLUTION. 3.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 17202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1727 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8313 - 7.2612 0.99 1355 149 0.1828 0.1854 REMARK 3 2 7.2612 - 5.7665 0.99 1324 150 0.2534 0.2685 REMARK 3 3 5.7665 - 5.0385 1.00 1306 148 0.2405 0.2930 REMARK 3 4 5.0385 - 4.5783 1.00 1295 144 0.2114 0.2364 REMARK 3 5 4.5783 - 4.2503 0.99 1292 144 0.2075 0.2559 REMARK 3 6 4.2503 - 3.9999 1.00 1294 146 0.2255 0.3033 REMARK 3 7 3.9999 - 3.7996 0.99 1246 140 0.2330 0.2929 REMARK 3 8 3.7996 - 3.6343 0.99 1311 144 0.2552 0.2975 REMARK 3 9 3.6343 - 3.4944 0.99 1265 143 0.2672 0.2909 REMARK 3 10 3.4944 - 3.3739 0.99 1291 141 0.2709 0.3072 REMARK 3 11 3.3739 - 3.2684 1.00 1255 142 0.2946 0.3758 REMARK 3 12 3.2684 - 3.1750 0.95 1241 136 0.3040 0.3699 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 85.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6098 REMARK 3 ANGLE : 0.551 8279 REMARK 3 CHIRALITY : 0.039 945 REMARK 3 PLANARITY : 0.003 1050 REMARK 3 DIHEDRAL : 4.530 4067 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZMA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-APR-18. REMARK 100 THE DEPOSITION ID IS D_1300007028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95380 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17212 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.170 REMARK 200 RESOLUTION RANGE LOW (A) : 47.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.64900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4EGC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES 7.5, 200MM NACL, 20% PEG REMARK 280 3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.90228 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.74850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.09570 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.90228 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.74850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 71.09570 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 245 REMARK 465 PRO B 246 REMARK 465 LEU B 247 REMARK 465 GLY B 248 REMARK 465 SER B 249 REMARK 465 PRO B 250 REMARK 465 GLU B 251 REMARK 465 PHE B 252 REMARK 465 SER B 253 REMARK 465 LYS B 254 REMARK 465 ARG B 255 REMARK 465 SER B 256 REMARK 465 SER B 257 REMARK 465 ASP B 258 REMARK 465 PRO B 259 REMARK 465 SER B 260 REMARK 465 PRO B 261 REMARK 465 ALA B 262 REMARK 465 GLY B 263 REMARK 465 SER B 358 REMARK 465 ALA B 359 REMARK 465 PRO B 360 REMARK 465 GLY B 361 REMARK 465 ALA B 362 REMARK 465 ASN B 363 REMARK 465 LEU B 364 REMARK 465 CYS B 365 REMARK 465 LEU B 366 REMARK 465 GLY B 367 REMARK 465 SER B 368 REMARK 465 GLY B 369 REMARK 465 VAL B 370 REMARK 465 HIS B 371 REMARK 465 GLY B 372 REMARK 465 GLU B 505 REMARK 465 GLU B 506 REMARK 465 GLU B 507 REMARK 465 GLN B 508 REMARK 465 GLY B 509 REMARK 465 ALA B 510 REMARK 465 LYS B 511 REMARK 465 GLY A 245 REMARK 465 PRO A 246 REMARK 465 LEU A 247 REMARK 465 GLY A 248 REMARK 465 SER A 249 REMARK 465 PRO A 250 REMARK 465 GLU A 251 REMARK 465 PHE A 252 REMARK 465 SER A 253 REMARK 465 LYS A 254 REMARK 465 ARG A 255 REMARK 465 SER A 256 REMARK 465 SER A 257 REMARK 465 ASP A 258 REMARK 465 PRO A 259 REMARK 465 SER A 260 REMARK 465 PRO A 261 REMARK 465 ALA A 262 REMARK 465 GLY A 263 REMARK 465 SER A 337 REMARK 465 SER A 338 REMARK 465 ASP A 339 REMARK 465 ASP A 340 REMARK 465 HIS A 356 REMARK 465 SER A 357 REMARK 465 SER A 358 REMARK 465 ALA A 359 REMARK 465 PRO A 360 REMARK 465 GLY A 361 REMARK 465 ALA A 362 REMARK 465 ASN A 363 REMARK 465 LEU A 364 REMARK 465 CYS A 365 REMARK 465 LEU A 366 REMARK 465 GLY A 367 REMARK 465 SER A 368 REMARK 465 GLY A 369 REMARK 465 VAL A 370 REMARK 465 HIS A 371 REMARK 465 GLY C 245 REMARK 465 PRO C 246 REMARK 465 LEU C 247 REMARK 465 GLY C 248 REMARK 465 SER C 249 REMARK 465 PRO C 250 REMARK 465 GLU C 251 REMARK 465 PHE C 252 REMARK 465 SER C 253 REMARK 465 LYS C 254 REMARK 465 ARG C 255 REMARK 465 SER C 256 REMARK 465 SER C 257 REMARK 465 ASP C 258 REMARK 465 PRO C 259 REMARK 465 SER C 260 REMARK 465 PRO C 261 REMARK 465 ALA C 262 REMARK 465 GLY C 263 REMARK 465 ASP C 264 REMARK 465 ASN C 265 REMARK 465 GLU C 266 REMARK 465 ILE C 267 REMARK 465 HIS C 356 REMARK 465 SER C 357 REMARK 465 SER C 358 REMARK 465 ALA C 359 REMARK 465 PRO C 360 REMARK 465 GLY C 361 REMARK 465 ALA C 362 REMARK 465 ASN C 363 REMARK 465 LEU C 364 REMARK 465 CYS C 365 REMARK 465 LEU C 366 REMARK 465 GLY C 367 REMARK 465 SER C 368 REMARK 465 GLY C 369 REMARK 465 VAL C 370 REMARK 465 HIS C 371 REMARK 465 GLY C 372 REMARK 465 GLY C 373 REMARK 465 VAL C 374 REMARK 465 ASP C 375 REMARK 465 TRP C 376 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 264 CG OD1 OD2 REMARK 470 ASN B 265 CG OD1 ND2 REMARK 470 GLU B 266 CG CD OE1 OE2 REMARK 470 ILE B 267 CG1 CG2 CD1 REMARK 470 GLU B 268 CG CD OE1 OE2 REMARK 470 ASP B 329 CG OD1 OD2 REMARK 470 ASN B 341 CG OD1 ND2 REMARK 470 HIS B 356 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 357 OG REMARK 470 VAL B 374 CG1 CG2 REMARK 470 LYS B 379 CG CD CE NZ REMARK 470 PHE B 382 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 407 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU B 408 CB CG CD OE1 OE2 REMARK 470 GLU B 416 CB CG CD OE1 OE2 REMARK 470 VAL B 446 CG1 CG2 REMARK 470 LYS B 477 CB CG CD CE NZ REMARK 470 LYS B 480 CB CG CD CE NZ REMARK 470 GLU B 485 CG CD OE1 OE2 REMARK 470 ARG B 493 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 494 CB CG CD CE NZ REMARK 470 ASP A 264 CG OD1 OD2 REMARK 470 ASN A 265 CG OD1 ND2 REMARK 470 GLU A 266 CG CD OE1 OE2 REMARK 470 ILE A 267 CG1 CG2 CD1 REMARK 470 GLU A 268 CB CG CD OE1 OE2 REMARK 470 ARG A 269 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 277 CG CD OE1 OE2 REMARK 470 PHE A 290 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 326 CG CD OE1 OE2 REMARK 470 LEU A 345 CG CD1 CD2 REMARK 470 ARG A 378 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS A 406 CG CD CE NZ REMARK 470 ARG A 407 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 433 CG OD1 ND2 REMARK 470 ASN A 440 CG OD1 ND2 REMARK 470 LYS A 477 CG CD CE NZ REMARK 470 GLU A 485 CG CD OE1 OE2 REMARK 470 ARG A 493 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 494 CB CG CD CE NZ REMARK 470 LYS A 511 CG CD CE NZ REMARK 470 GLU A 527 CG CD OE1 OE2 REMARK 470 GLU C 268 CG CD OE1 OE2 REMARK 470 GLU C 277 CB CG CD OE1 OE2 REMARK 470 GLU C 309 CG CD OE1 OE2 REMARK 470 GLN C 330 CG CD OE1 NE2 REMARK 470 ASP C 339 CG OD1 OD2 REMARK 470 ARG C 378 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 379 CG CD CE NZ REMARK 470 ARG C 383 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 386 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 440 CG OD1 ND2 REMARK 470 LYS C 480 CG CD CE NZ REMARK 470 GLU C 505 CB CG CD OE1 OE2 REMARK 470 GLU C 507 CG CD OE1 OE2 REMARK 470 GLN C 508 CG CD OE1 NE2 REMARK 470 LYS C 511 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY A 492 OH TYR A 497 2.17 REMARK 500 O GLY B 373 N MET B 377 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 278 -46.10 -139.05 REMARK 500 ILE B 279 -70.03 -124.63 REMARK 500 PHE B 282 56.14 -117.61 REMARK 500 ALA B 352 64.27 -104.89 REMARK 500 LEU B 401 -62.72 -98.31 REMARK 500 THR B 478 -67.20 -95.67 REMARK 500 THR A 278 -67.84 -143.32 REMARK 500 ILE A 281 60.20 32.52 REMARK 500 HIS A 283 -6.60 59.75 REMARK 500 ASP A 353 52.22 -150.40 REMARK 500 LYS A 494 51.69 -98.53 REMARK 500 SER A 521 -7.44 -140.48 REMARK 500 TYR A 537 0.15 -67.57 REMARK 500 GLU C 277 9.64 58.27 REMARK 500 THR C 278 -42.84 -139.60 REMARK 500 ILE C 279 -58.20 -128.81 REMARK 500 ILE C 281 -64.52 -102.16 REMARK 500 ASP C 340 73.61 -110.32 REMARK 500 ALA C 475 32.58 -97.98 REMARK 500 LYS C 480 36.93 -98.61 REMARK 500 GLU C 481 35.93 -142.80 REMARK 500 SER C 482 -33.96 -159.49 REMARK 500 ASP C 502 -59.06 -126.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9FX B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9FX A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9FX C 601 DBREF 5ZMA B 253 538 UNP O00167 EYA2_HUMAN 253 538 DBREF 5ZMA A 253 538 UNP O00167 EYA2_HUMAN 253 538 DBREF 5ZMA C 253 538 UNP O00167 EYA2_HUMAN 253 538 SEQADV 5ZMA GLY B 245 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PRO B 246 UNP O00167 EXPRESSION TAG SEQADV 5ZMA LEU B 247 UNP O00167 EXPRESSION TAG SEQADV 5ZMA GLY B 248 UNP O00167 EXPRESSION TAG SEQADV 5ZMA SER B 249 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PRO B 250 UNP O00167 EXPRESSION TAG SEQADV 5ZMA GLU B 251 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PHE B 252 UNP O00167 EXPRESSION TAG SEQADV 5ZMA GLY A 245 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PRO A 246 UNP O00167 EXPRESSION TAG SEQADV 5ZMA LEU A 247 UNP O00167 EXPRESSION TAG SEQADV 5ZMA GLY A 248 UNP O00167 EXPRESSION TAG SEQADV 5ZMA SER A 249 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PRO A 250 UNP O00167 EXPRESSION TAG SEQADV 5ZMA GLU A 251 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PHE A 252 UNP O00167 EXPRESSION TAG SEQADV 5ZMA GLY C 245 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PRO C 246 UNP O00167 EXPRESSION TAG SEQADV 5ZMA LEU C 247 UNP O00167 EXPRESSION TAG SEQADV 5ZMA GLY C 248 UNP O00167 EXPRESSION TAG SEQADV 5ZMA SER C 249 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PRO C 250 UNP O00167 EXPRESSION TAG SEQADV 5ZMA GLU C 251 UNP O00167 EXPRESSION TAG SEQADV 5ZMA PHE C 252 UNP O00167 EXPRESSION TAG SEQRES 1 B 294 GLY PRO LEU GLY SER PRO GLU PHE SER LYS ARG SER SER SEQRES 2 B 294 ASP PRO SER PRO ALA GLY ASP ASN GLU ILE GLU ARG VAL SEQRES 3 B 294 PHE VAL TRP ASP LEU ASP GLU THR ILE ILE ILE PHE HIS SEQRES 4 B 294 SER LEU LEU THR GLY THR PHE ALA SER ARG TYR GLY LYS SEQRES 5 B 294 ASP THR THR THR SER VAL ARG ILE GLY LEU MET MET GLU SEQRES 6 B 294 GLU MET ILE PHE ASN LEU ALA ASP THR HIS LEU PHE PHE SEQRES 7 B 294 ASN ASP LEU GLU ASP CYS ASP GLN ILE HIS VAL ASP ASP SEQRES 8 B 294 VAL SER SER ASP ASP ASN GLY GLN ASP LEU SER THR TYR SEQRES 9 B 294 ASN PHE SER ALA ASP GLY PHE HIS SER SER ALA PRO GLY SEQRES 10 B 294 ALA ASN LEU CYS LEU GLY SER GLY VAL HIS GLY GLY VAL SEQRES 11 B 294 ASP TRP MET ARG LYS LEU ALA PHE ARG TYR ARG ARG VAL SEQRES 12 B 294 LYS GLU MET TYR ASN THR TYR LYS ASN ASN VAL GLY GLY SEQRES 13 B 294 LEU ILE GLY THR PRO LYS ARG GLU THR TRP LEU GLN LEU SEQRES 14 B 294 ARG ALA GLU LEU GLU ALA LEU THR ASP LEU TRP LEU THR SEQRES 15 B 294 HIS SER LEU LYS ALA LEU ASN LEU ILE ASN SER ARG PRO SEQRES 16 B 294 ASN CYS VAL ASN VAL LEU VAL THR THR THR GLN LEU ILE SEQRES 17 B 294 PRO ALA LEU ALA LYS VAL LEU LEU TYR GLY LEU GLY SER SEQRES 18 B 294 VAL PHE PRO ILE GLU ASN ILE TYR SER ALA THR LYS THR SEQRES 19 B 294 GLY LYS GLU SER CYS PHE GLU ARG ILE MET GLN ARG PHE SEQRES 20 B 294 GLY ARG LYS ALA VAL TYR VAL VAL ILE GLY ASP GLY VAL SEQRES 21 B 294 GLU GLU GLU GLN GLY ALA LYS LYS HIS ASN MET PRO PHE SEQRES 22 B 294 TRP ARG ILE SER CYS HIS ALA ASP LEU GLU ALA LEU ARG SEQRES 23 B 294 HIS ALA LEU GLU LEU GLU TYR LEU SEQRES 1 A 294 GLY PRO LEU GLY SER PRO GLU PHE SER LYS ARG SER SER SEQRES 2 A 294 ASP PRO SER PRO ALA GLY ASP ASN GLU ILE GLU ARG VAL SEQRES 3 A 294 PHE VAL TRP ASP LEU ASP GLU THR ILE ILE ILE PHE HIS SEQRES 4 A 294 SER LEU LEU THR GLY THR PHE ALA SER ARG TYR GLY LYS SEQRES 5 A 294 ASP THR THR THR SER VAL ARG ILE GLY LEU MET MET GLU SEQRES 6 A 294 GLU MET ILE PHE ASN LEU ALA ASP THR HIS LEU PHE PHE SEQRES 7 A 294 ASN ASP LEU GLU ASP CYS ASP GLN ILE HIS VAL ASP ASP SEQRES 8 A 294 VAL SER SER ASP ASP ASN GLY GLN ASP LEU SER THR TYR SEQRES 9 A 294 ASN PHE SER ALA ASP GLY PHE HIS SER SER ALA PRO GLY SEQRES 10 A 294 ALA ASN LEU CYS LEU GLY SER GLY VAL HIS GLY GLY VAL SEQRES 11 A 294 ASP TRP MET ARG LYS LEU ALA PHE ARG TYR ARG ARG VAL SEQRES 12 A 294 LYS GLU MET TYR ASN THR TYR LYS ASN ASN VAL GLY GLY SEQRES 13 A 294 LEU ILE GLY THR PRO LYS ARG GLU THR TRP LEU GLN LEU SEQRES 14 A 294 ARG ALA GLU LEU GLU ALA LEU THR ASP LEU TRP LEU THR SEQRES 15 A 294 HIS SER LEU LYS ALA LEU ASN LEU ILE ASN SER ARG PRO SEQRES 16 A 294 ASN CYS VAL ASN VAL LEU VAL THR THR THR GLN LEU ILE SEQRES 17 A 294 PRO ALA LEU ALA LYS VAL LEU LEU TYR GLY LEU GLY SER SEQRES 18 A 294 VAL PHE PRO ILE GLU ASN ILE TYR SER ALA THR LYS THR SEQRES 19 A 294 GLY LYS GLU SER CYS PHE GLU ARG ILE MET GLN ARG PHE SEQRES 20 A 294 GLY ARG LYS ALA VAL TYR VAL VAL ILE GLY ASP GLY VAL SEQRES 21 A 294 GLU GLU GLU GLN GLY ALA LYS LYS HIS ASN MET PRO PHE SEQRES 22 A 294 TRP ARG ILE SER CYS HIS ALA ASP LEU GLU ALA LEU ARG SEQRES 23 A 294 HIS ALA LEU GLU LEU GLU TYR LEU SEQRES 1 C 294 GLY PRO LEU GLY SER PRO GLU PHE SER LYS ARG SER SER SEQRES 2 C 294 ASP PRO SER PRO ALA GLY ASP ASN GLU ILE GLU ARG VAL SEQRES 3 C 294 PHE VAL TRP ASP LEU ASP GLU THR ILE ILE ILE PHE HIS SEQRES 4 C 294 SER LEU LEU THR GLY THR PHE ALA SER ARG TYR GLY LYS SEQRES 5 C 294 ASP THR THR THR SER VAL ARG ILE GLY LEU MET MET GLU SEQRES 6 C 294 GLU MET ILE PHE ASN LEU ALA ASP THR HIS LEU PHE PHE SEQRES 7 C 294 ASN ASP LEU GLU ASP CYS ASP GLN ILE HIS VAL ASP ASP SEQRES 8 C 294 VAL SER SER ASP ASP ASN GLY GLN ASP LEU SER THR TYR SEQRES 9 C 294 ASN PHE SER ALA ASP GLY PHE HIS SER SER ALA PRO GLY SEQRES 10 C 294 ALA ASN LEU CYS LEU GLY SER GLY VAL HIS GLY GLY VAL SEQRES 11 C 294 ASP TRP MET ARG LYS LEU ALA PHE ARG TYR ARG ARG VAL SEQRES 12 C 294 LYS GLU MET TYR ASN THR TYR LYS ASN ASN VAL GLY GLY SEQRES 13 C 294 LEU ILE GLY THR PRO LYS ARG GLU THR TRP LEU GLN LEU SEQRES 14 C 294 ARG ALA GLU LEU GLU ALA LEU THR ASP LEU TRP LEU THR SEQRES 15 C 294 HIS SER LEU LYS ALA LEU ASN LEU ILE ASN SER ARG PRO SEQRES 16 C 294 ASN CYS VAL ASN VAL LEU VAL THR THR THR GLN LEU ILE SEQRES 17 C 294 PRO ALA LEU ALA LYS VAL LEU LEU TYR GLY LEU GLY SER SEQRES 18 C 294 VAL PHE PRO ILE GLU ASN ILE TYR SER ALA THR LYS THR SEQRES 19 C 294 GLY LYS GLU SER CYS PHE GLU ARG ILE MET GLN ARG PHE SEQRES 20 C 294 GLY ARG LYS ALA VAL TYR VAL VAL ILE GLY ASP GLY VAL SEQRES 21 C 294 GLU GLU GLU GLN GLY ALA LYS LYS HIS ASN MET PRO PHE SEQRES 22 C 294 TRP ARG ILE SER CYS HIS ALA ASP LEU GLU ALA LEU ARG SEQRES 23 C 294 HIS ALA LEU GLU LEU GLU TYR LEU HET 9FX B 601 24 HET 9FX A 601 24 HET 9FX C 601 24 HETNAM 9FX 3-FLUORO-N'-[(E)-{5-[(PYRIMIDIN-2-YL)SULFANYL]FURAN-2- HETNAM 2 9FX YL}METHYLIDENE]BENZOHYDRAZIDE FORMUL 4 9FX 3(C16 H11 F N4 O2 S) HELIX 1 AA1 PHE B 282 THR B 287 1 6 HELIX 2 AA2 GLY B 288 GLY B 295 1 8 HELIX 3 AA3 ASP B 297 HIS B 319 1 23 HELIX 4 AA4 PHE B 321 GLU B 326 1 6 HELIX 5 AA5 HIS B 332 ASP B 340 5 9 HELIX 6 AA6 MET B 377 LYS B 395 1 19 HELIX 7 AA7 ASN B 397 LEU B 401 5 5 HELIX 8 AA8 PRO B 405 THR B 421 1 17 HELIX 9 AA9 LEU B 423 ARG B 438 1 16 HELIX 10 AB1 GLN B 450 GLY B 462 1 13 HELIX 11 AB2 PRO B 468 GLU B 470 5 3 HELIX 12 AB3 GLY B 479 GLY B 492 1 14 HELIX 13 AB4 CYS B 522 LEU B 535 1 14 HELIX 14 AB5 GLY A 288 TYR A 294 1 7 HELIX 15 AB6 ASP A 297 HIS A 319 1 23 HELIX 16 AB7 PHE A 321 GLU A 326 1 6 HELIX 17 AB8 HIS A 332 VAL A 336 5 5 HELIX 18 AB9 GLY A 373 TYR A 394 1 22 HELIX 19 AC1 ASN A 397 THR A 421 1 25 HELIX 20 AC2 LEU A 423 ARG A 438 1 16 HELIX 21 AC3 GLN A 450 TYR A 461 1 12 HELIX 22 AC4 GLY A 462 VAL A 466 5 5 HELIX 23 AC5 PRO A 468 GLU A 470 5 3 HELIX 24 AC6 GLY A 479 GLY A 492 1 14 HELIX 25 AC7 VAL A 504 HIS A 513 1 10 HELIX 26 AC8 CYS A 522 LEU A 535 1 14 HELIX 27 AC9 PHE C 282 GLY C 288 1 7 HELIX 28 AD1 GLY C 288 GLY C 295 1 8 HELIX 29 AD2 ASP C 297 HIS C 319 1 23 HELIX 30 AD3 HIS C 332 VAL C 336 5 5 HELIX 31 AD4 ARG C 378 LYS C 395 1 18 HELIX 32 AD5 VAL C 398 GLY C 403 1 6 HELIX 33 AD6 THR C 404 ASP C 422 1 19 HELIX 34 AD7 LEU C 423 ARG C 438 1 16 HELIX 35 AD8 GLN C 450 TYR C 461 1 12 HELIX 36 AD9 PRO C 468 GLU C 470 5 3 HELIX 37 AE1 SER C 482 GLY C 492 1 11 HELIX 38 AE2 VAL C 504 LYS C 512 1 9 HELIX 39 AE3 CYS C 522 LEU C 535 1 14 SHEET 1 AA1 5 ILE B 472 SER B 474 0 SHEET 2 AA1 5 CYS B 441 THR B 447 1 N LEU B 445 O TYR B 473 SHEET 3 AA1 5 ARG B 269 TRP B 273 1 N PHE B 271 O VAL B 444 SHEET 4 AA1 5 VAL B 496 GLY B 501 1 O VAL B 498 N VAL B 272 SHEET 5 AA1 5 PHE B 517 ARG B 519 1 O TRP B 518 N VAL B 499 SHEET 1 AA2 5 ILE A 472 SER A 474 0 SHEET 2 AA2 5 CYS A 441 THR A 447 1 N LEU A 445 O TYR A 473 SHEET 3 AA2 5 ARG A 269 ASP A 274 1 N PHE A 271 O VAL A 444 SHEET 4 AA2 5 VAL A 496 GLY A 501 1 O ILE A 500 N VAL A 272 SHEET 5 AA2 5 PHE A 517 ARG A 519 1 O TRP A 518 N VAL A 499 SHEET 1 AA3 5 ILE C 472 SER C 474 0 SHEET 2 AA3 5 CYS C 441 THR C 447 1 N LEU C 445 O TYR C 473 SHEET 3 AA3 5 ARG C 269 TRP C 273 1 N TRP C 273 O VAL C 444 SHEET 4 AA3 5 VAL C 496 GLY C 501 1 O ILE C 500 N VAL C 272 SHEET 5 AA3 5 PHE C 517 ARG C 519 1 O TRP C 518 N VAL C 499 CISPEP 1 THR B 404 PRO B 405 0 12.21 CISPEP 2 THR A 404 PRO A 405 0 20.30 SITE 1 AC1 13 THR B 278 ILE B 279 PHE B 282 PHE B 290 SITE 2 AC1 13 TYR B 294 ARG B 414 LEU B 417 LEU B 420 SITE 3 AC1 13 THR B 421 TRP B 424 LEU B 425 TYR B 461 SITE 4 AC1 13 HIS B 523 SITE 1 AC2 11 THR A 278 PHE A 282 TYR A 294 MET A 308 SITE 2 AC2 11 ARG A 414 THR A 421 ASP A 422 TRP A 424 SITE 3 AC2 11 LEU A 425 TYR A 461 HIS A 523 SITE 1 AC3 11 THR C 278 ILE C 279 PHE C 282 TYR C 294 SITE 2 AC3 11 MET C 308 ARG C 414 LEU C 420 THR C 421 SITE 3 AC3 11 ASP C 422 TRP C 424 LEU C 425 CRYST1 143.985 49.497 144.957 90.00 101.21 90.00 I 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006945 0.000000 0.001376 0.00000 SCALE2 0.000000 0.020203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007033 0.00000