HEADER VIRUS LIKE PARTICLE 16-APR-18 5ZPW TITLE GENERATION OF A LONG-ACTING FUSION INHIBITOR AGAINST HIV-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSMEMBRANE PROTEIN GP41; COMPND 3 CHAIN: A, C, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MET-THR-TRP-GLU-GLU-TRP-ASP-MK8-LYS-ILE-GLU-MK8-TYR-THR- COMPND 7 MK8-LYS-ILE-GLU-MK8-LEU-ILE-LYS-LYS-SER; COMPND 8 CHAIN: B, D, F; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 4 ORGANISM_TAXID: 11676; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630 KEYWDS INHIBITOR, COMPLEX, VIRUS, VIRUS LIKE PARTICLE EXPDTA X-RAY DIFFRACTION AUTHOR Y.GUO,X.L.SHI REVDAT 2 22-NOV-23 5ZPW 1 REMARK REVDAT 1 06-MAR-19 5ZPW 0 JRNL AUTH Y.GUO,P.P.ZHOU,S.Y.ZHANG,X.W.FAN,Y.W.DOU,X.L.SHI JRNL TITL GENERATION OF A LONG-ACTING FUSION INHIBITOR AGAINST HIV-1. JRNL REF MEDCHEMCOMM V. 9 1226 2018 JRNL REFN ISSN 2040-2503 JRNL PMID 30109011 JRNL DOI 10.1039/C8MD00124C REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 11741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.720 REMARK 3 FREE R VALUE TEST SET COUNT : 554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6270 - 3.4859 0.93 2719 121 0.2302 0.2326 REMARK 3 2 3.4859 - 2.7694 1.00 2829 145 0.2707 0.3066 REMARK 3 3 2.7694 - 2.4200 1.00 2833 135 0.2340 0.2780 REMARK 3 4 2.4200 - 2.1991 1.00 2806 153 0.2279 0.3057 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1556 REMARK 3 ANGLE : 1.057 2092 REMARK 3 CHIRALITY : 0.046 235 REMARK 3 PLANARITY : 0.004 237 REMARK 3 DIHEDRAL : 19.866 908 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 554 THROUGH 588 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1601 155.4199 7.9887 REMARK 3 T TENSOR REMARK 3 T11: 0.4030 T22: 0.4627 REMARK 3 T33: 0.5568 T12: 0.0020 REMARK 3 T13: 0.0269 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 1.4715 L22: 1.2369 REMARK 3 L33: 0.6747 L12: -0.4568 REMARK 3 L13: 0.2850 L23: -1.2826 REMARK 3 S TENSOR REMARK 3 S11: 0.0140 S12: 0.0901 S13: -0.1467 REMARK 3 S21: 0.7093 S22: -0.3606 S23: -0.3174 REMARK 3 S31: -0.0335 S32: 0.0888 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 626 THROUGH 649 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9934 161.1933 -3.6619 REMARK 3 T TENSOR REMARK 3 T11: 0.5922 T22: 0.5906 REMARK 3 T33: 0.4448 T12: 0.0514 REMARK 3 T13: 0.0715 T23: 0.0722 REMARK 3 L TENSOR REMARK 3 L11: 0.6058 L22: 0.6576 REMARK 3 L33: 4.2459 L12: -0.2816 REMARK 3 L13: -1.1945 L23: -0.6103 REMARK 3 S TENSOR REMARK 3 S11: 0.0068 S12: 0.3533 S13: -0.1359 REMARK 3 S21: -0.1246 S22: -0.3403 S23: 0.5522 REMARK 3 S31: 0.2015 S32: 0.3075 S33: 0.0012 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 554 THROUGH 588 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.4687 156.6676 14.6365 REMARK 3 T TENSOR REMARK 3 T11: 0.5390 T22: 0.5057 REMARK 3 T33: 0.4846 T12: -0.0189 REMARK 3 T13: 0.0890 T23: -0.0331 REMARK 3 L TENSOR REMARK 3 L11: 0.8349 L22: 1.1532 REMARK 3 L33: -0.6530 L12: -0.1513 REMARK 3 L13: 0.0815 L23: 0.2344 REMARK 3 S TENSOR REMARK 3 S11: 0.0936 S12: -0.0611 S13: -0.0703 REMARK 3 S21: -0.2927 S22: -0.1274 S23: 0.0161 REMARK 3 S31: -0.0640 S32: -0.0016 S33: 0.0016 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 626 THROUGH 649 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2697 167.0184 16.6617 REMARK 3 T TENSOR REMARK 3 T11: 0.4980 T22: 0.5011 REMARK 3 T33: 0.2556 T12: -0.1081 REMARK 3 T13: 0.0441 T23: -0.0902 REMARK 3 L TENSOR REMARK 3 L11: 4.7576 L22: 2.2625 REMARK 3 L33: 1.0451 L12: 2.9583 REMARK 3 L13: -0.0975 L23: 0.9481 REMARK 3 S TENSOR REMARK 3 S11: 0.0689 S12: -0.0924 S13: -0.2612 REMARK 3 S21: 0.2888 S22: -0.3151 S23: 0.6357 REMARK 3 S31: -0.1372 S32: 0.3051 S33: -0.0036 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 554 THROUGH 588 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1512 153.9852 5.9923 REMARK 3 T TENSOR REMARK 3 T11: 0.5112 T22: 0.5449 REMARK 3 T33: 0.5451 T12: -0.0760 REMARK 3 T13: -0.0155 T23: -0.0504 REMARK 3 L TENSOR REMARK 3 L11: 0.7089 L22: 1.2094 REMARK 3 L33: 0.0201 L12: -0.4026 REMARK 3 L13: -0.1322 L23: -0.3139 REMARK 3 S TENSOR REMARK 3 S11: 0.1049 S12: 0.0763 S13: -0.0814 REMARK 3 S21: 0.1704 S22: -0.0379 S23: 0.6609 REMARK 3 S31: -0.1250 S32: -0.1894 S33: 0.0007 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 626 THROUGH 649 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7749 163.1847 8.9229 REMARK 3 T TENSOR REMARK 3 T11: 0.3964 T22: 0.6202 REMARK 3 T33: 0.5942 T12: 0.0349 REMARK 3 T13: -0.0273 T23: -0.1296 REMARK 3 L TENSOR REMARK 3 L11: 3.3014 L22: 1.5960 REMARK 3 L33: 0.8676 L12: -1.5319 REMARK 3 L13: -0.6339 L23: 0.9358 REMARK 3 S TENSOR REMARK 3 S11: 0.0199 S12: 0.1846 S13: -0.2979 REMARK 3 S21: -0.1196 S22: -0.4079 S23: 0.5057 REMARK 3 S31: 0.0626 S32: -0.3711 S33: -0.0099 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZPW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-APR-18. REMARK 100 THE DEPOSITION ID IS D_1300007419. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11745 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.199 REMARK 200 RESOLUTION RANGE LOW (A) : 21.184 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.61100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3VU6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, MAGNESIUM CHLORIDE, 2-[4-(2 REMARK 280 -HYDROXYETHYL)-1-PIPERAZINYL]ETHANESULFONIC ACID, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.36850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.36850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.07200 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.36850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.36850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.07200 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 42.36850 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 42.36850 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 33.07200 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 42.36850 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 42.36850 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 33.07200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE MK8 B 633 CE MK8 B 637 1.49 REMARK 500 CE MK8 D 633 CE MK8 D 637 1.49 REMARK 500 CE MK8 F 640 CE MK8 F 644 1.49 REMARK 500 CE MK8 F 633 CE MK8 F 637 1.49 REMARK 500 CE MK8 B 640 CE MK8 B 644 1.49 REMARK 500 CE MK8 D 640 CE MK8 D 644 1.49 REMARK 500 NZ LYS F 634 O HOH F 701 2.00 REMARK 500 O LYS C 588 O HOH C 601 2.02 REMARK 500 OE2 GLU C 560 O HOH C 602 2.16 REMARK 500 OE1 GLN A 575 O HOH A 601 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU F 645 CA - CB - CG ANGL. DEV. = -14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 627 162.16 47.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 5ZPW A 554 588 UNP D6NUQ7 D6NUQ7_9HIV1 560 594 DBREF 5ZPW B 626 649 PDB 5ZPW 5ZPW 626 649 DBREF 5ZPW C 554 588 UNP D6NUQ7 D6NUQ7_9HIV1 560 594 DBREF 5ZPW D 626 649 PDB 5ZPW 5ZPW 626 649 DBREF 5ZPW E 554 588 UNP D6NUQ7 D6NUQ7_9HIV1 560 594 DBREF 5ZPW F 626 649 PDB 5ZPW 5ZPW 626 649 SEQRES 1 A 35 ASN LEU LEU ARG ALA ILE GLU ALA GLN GLN HIS LEU LEU SEQRES 2 A 35 GLN LEU THR VAL TRP GLY ILE LYS GLN LEU GLN ALA ARG SEQRES 3 A 35 LEU LEU ALA VAL GLU ARG TYR LEU LYS SEQRES 1 B 24 MET THR TRP GLU GLU TRP ASP MK8 LYS ILE GLU MK8 TYR SEQRES 2 B 24 THR MK8 LYS ILE GLU MK8 LEU ILE LYS LYS SER SEQRES 1 C 35 ASN LEU LEU ARG ALA ILE GLU ALA GLN GLN HIS LEU LEU SEQRES 2 C 35 GLN LEU THR VAL TRP GLY ILE LYS GLN LEU GLN ALA ARG SEQRES 3 C 35 LEU LEU ALA VAL GLU ARG TYR LEU LYS SEQRES 1 D 24 MET THR TRP GLU GLU TRP ASP MK8 LYS ILE GLU MK8 TYR SEQRES 2 D 24 THR MK8 LYS ILE GLU MK8 LEU ILE LYS LYS SER SEQRES 1 E 35 ASN LEU LEU ARG ALA ILE GLU ALA GLN GLN HIS LEU LEU SEQRES 2 E 35 GLN LEU THR VAL TRP GLY ILE LYS GLN LEU GLN ALA ARG SEQRES 3 E 35 LEU LEU ALA VAL GLU ARG TYR LEU LYS SEQRES 1 F 24 MET THR TRP GLU GLU TRP ASP MK8 LYS ILE GLU MK8 TYR SEQRES 2 F 24 THR MK8 LYS ILE GLU MK8 LEU ILE LYS LYS SER HET MK8 B 633 9 HET MK8 B 637 9 HET MK8 B 640 9 HET MK8 B 644 9 HET MK8 D 633 9 HET MK8 D 637 9 HET MK8 D 640 9 HET MK8 D 644 9 HET MK8 F 633 9 HET MK8 F 637 9 HET MK8 F 640 9 HET MK8 F 644 9 HETNAM MK8 2-METHYL-L-NORLEUCINE FORMUL 2 MK8 12(C7 H15 N O2) FORMUL 7 HOH *29(H2 O) HELIX 1 AA1 ASN A 554 LYS A 588 1 35 HELIX 2 AA2 THR B 627 SER B 649 1 23 HELIX 3 AA3 LEU C 555 LYS C 588 1 34 HELIX 4 AA4 THR D 627 SER D 649 1 23 HELIX 5 AA5 LEU E 555 LEU E 587 1 33 HELIX 6 AA6 THR F 627 SER F 649 1 23 LINK C ASP B 632 N MK8 B 633 1555 1555 1.33 LINK C MK8 B 633 N LYS B 634 1555 1555 1.33 LINK C GLU B 636 N MK8 B 637 1555 1555 1.34 LINK C MK8 B 637 N TYR B 638 1555 1555 1.33 LINK C THR B 639 N MK8 B 640 1555 1555 1.33 LINK C MK8 B 640 N LYS B 641 1555 1555 1.33 LINK C GLU B 643 N MK8 B 644 1555 1555 1.33 LINK C MK8 B 644 N LEU B 645 1555 1555 1.33 LINK C ASP D 632 N MK8 D 633 1555 1555 1.33 LINK C MK8 D 633 N LYS D 634 1555 1555 1.32 LINK C GLU D 636 N MK8 D 637 1555 1555 1.33 LINK C MK8 D 637 N TYR D 638 1555 1555 1.33 LINK C THR D 639 N MK8 D 640 1555 1555 1.33 LINK C MK8 D 640 N LYS D 641 1555 1555 1.33 LINK C GLU D 643 N MK8 D 644 1555 1555 1.33 LINK C MK8 D 644 N LEU D 645 1555 1555 1.33 LINK C ASP F 632 N MK8 F 633 1555 1555 1.34 LINK C MK8 F 633 N LYS F 634 1555 1555 1.33 LINK C GLU F 636 N MK8 F 637 1555 1555 1.33 LINK C MK8 F 637 N TYR F 638 1555 1555 1.33 LINK C THR F 639 N MK8 F 640 1555 1555 1.33 LINK C MK8 F 640 N LYS F 641 1555 1555 1.32 LINK C GLU F 643 N MK8 F 644 1555 1555 1.33 LINK C MK8 F 644 N LEU F 645 1555 1555 1.33 CRYST1 84.737 84.737 66.144 90.00 90.00 90.00 I 4 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011801 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015119 0.00000