HEADER PROTEIN BINDING 25-APR-18 5ZRX TITLE CRYSTAL STRUCTURE OF EPHA2/SHIP2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 5-PHOSPHATASE 2, COMPND 3 EPHRIN TYPE-A RECEPTOR 2; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: ABLSH3-BINDING PROTEIN,INOSITOL POLYPHOSPHATE PHOSPHATASE- COMPND 6 LIKE PROTEIN 1,INPPL-1,SH2 DOMAIN-CONTAINING INOSITOL 5'-PHOSPHATASE COMPND 7 2,SHIP-2,EPITHELIAL CELL KINASE,TYROSINE-PROTEIN KINASE RECEPTOR ECK, COMPND 8 TYROSINE-PROTEIN KINASE RECEPTOR MPK-5,TYROSINE-PROTEIN KINASE COMPND 9 RECEPTOR SEK-2; COMPND 10 EC: 3.1.3.86,2.7.10.1; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: FUSION PROTEIN OF SAM DOMAIN FROM PHOSPHATIDYLINOSITOL COMPND 13 3,4,5-TRISPHOSPHATE 5-PHOSPHATASE 2 AND EPHRIN TYPE-A RECEPTOR 2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: INPPL1, SHIP2, EPHA2, ECK, MYK2, SEK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SAM DOMAIN, HETERODIMER, SIGNALING PROTEIN, CELL SIGNALING, RECEPTOR, KEYWDS 2 TRANSMEMBRANE, TYROSINE-PROTEIN KINASE, CELL ADHESION, PROTEIN KEYWDS 3 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR Y.WANG,Y.SHANG,J.LI,W.CHEN,G.LI,J.WAN,W.LIU,M.ZHANG REVDAT 3 22-NOV-23 5ZRX 1 REMARK REVDAT 2 15-SEP-21 5ZRX 1 REMARK REVDAT 1 30-MAY-18 5ZRX 0 JRNL AUTH Y.WANG,Y.SHANG,J.LI,W.CHEN,G.LI,J.WAN,W.LIU,M.ZHANG JRNL TITL SPECIFIC EPH RECEPTOR-CYTOPLASMIC EFFECTOR SIGNALING JRNL TITL 2 MEDIATED BY SAM-SAM DOMAIN INTERACTIONS. JRNL REF ELIFE V. 7 2018 JRNL REFN ESSN 2050-084X JRNL PMID 29749928 JRNL DOI 10.7554/ELIFE.35677 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 41294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2188 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2921 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 178 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2007 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 273 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : 0.70000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.66000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.074 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.928 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2090 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1949 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2828 ; 1.224 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4515 ; 0.953 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 260 ; 4.549 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;39.197 ;24.476 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 382 ;13.456 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;14.747 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 311 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2324 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 430 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4039 ; 1.395 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 162 ;29.589 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4106 ;13.133 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 906 A 970 REMARK 3 ORIGIN FOR THE GROUP (A): -11.0234 16.7014 35.5416 REMARK 3 T TENSOR REMARK 3 T11: 0.0293 T22: 0.0335 REMARK 3 T33: 0.0190 T12: 0.0039 REMARK 3 T13: -0.0229 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.0114 L22: 0.0094 REMARK 3 L33: 0.2571 L12: 0.0097 REMARK 3 L13: -0.0519 L23: -0.0419 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: -0.0015 S13: 0.0021 REMARK 3 S21: -0.0007 S22: -0.0086 S23: 0.0031 REMARK 3 S31: -0.0320 S32: 0.0002 S33: 0.0084 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 907 B 969 REMARK 3 ORIGIN FOR THE GROUP (A): -14.3797 25.8208 11.6803 REMARK 3 T TENSOR REMARK 3 T11: 0.0165 T22: 0.0370 REMARK 3 T33: 0.0198 T12: -0.0006 REMARK 3 T13: -0.0177 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.1068 L22: 0.3133 REMARK 3 L33: 0.0730 L12: 0.0617 REMARK 3 L13: -0.0262 L23: -0.1472 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: -0.0066 S13: 0.0161 REMARK 3 S21: -0.0199 S22: 0.0185 S23: 0.0199 REMARK 3 S31: 0.0102 S32: 0.0025 S33: -0.0107 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1196 A 1256 REMARK 3 ORIGIN FOR THE GROUP (A): -24.6754 5.4159 20.3555 REMARK 3 T TENSOR REMARK 3 T11: 0.0256 T22: 0.0509 REMARK 3 T33: 0.0219 T12: -0.0059 REMARK 3 T13: -0.0235 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.1343 L22: 0.1082 REMARK 3 L33: 0.0831 L12: -0.1152 REMARK 3 L13: 0.1049 L23: -0.0876 REMARK 3 S TENSOR REMARK 3 S11: 0.0131 S12: -0.0245 S13: -0.0192 REMARK 3 S21: -0.0027 S22: 0.0025 S23: 0.0081 REMARK 3 S31: 0.0107 S32: -0.0264 S33: -0.0156 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1196 B 1257 REMARK 3 ORIGIN FOR THE GROUP (A): -33.3774 25.2753 -1.1500 REMARK 3 T TENSOR REMARK 3 T11: 0.0266 T22: 0.0287 REMARK 3 T33: 0.0288 T12: 0.0011 REMARK 3 T13: -0.0257 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.1843 L22: 0.2129 REMARK 3 L33: 0.0937 L12: -0.1283 REMARK 3 L13: 0.1294 L23: -0.0795 REMARK 3 S TENSOR REMARK 3 S11: -0.0168 S12: -0.0068 S13: 0.0087 REMARK 3 S21: -0.0079 S22: -0.0005 S23: -0.0019 REMARK 3 S31: -0.0222 S32: -0.0075 S33: 0.0172 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5ZRX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1300006784. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43485 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.62400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KKA AND 2K4P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SUCCINIC ACID PH 7.0, 20% W/V REMARK 280 POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 69.14150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.67200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 69.14150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.67200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS HETERODIMER OF TWO SAM DOMAINS. REMARK 300 HOWEVER, TWO DOMAINS WERE EXPRESSED AS A FUSED SINGLE CHAIN PROTEIN REMARK 300 IN THIS STRUCTURE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1481 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1194 REMARK 465 PRO A 1195 REMARK 465 LYS A 1257 REMARK 465 SER A 1258 REMARK 465 SER A 1259 REMARK 465 GLY A 1260 REMARK 465 GLU A 1261 REMARK 465 ASN A 1262 REMARK 465 LEU A 1263 REMARK 465 TYR A 1264 REMARK 465 PHE A 1265 REMARK 465 GLN A 1266 REMARK 465 SER A 1267 REMARK 465 SER A 1268 REMARK 465 GLY A 1269 REMARK 465 SER A 1270 REMARK 465 SER A 1271 REMARK 465 GLY A 1272 REMARK 465 GLY A 898 REMARK 465 SER A 899 REMARK 465 SER A 900 REMARK 465 GLY A 901 REMARK 465 SER A 902 REMARK 465 GLU A 903 REMARK 465 GLY A 904 REMARK 465 VAL A 905 REMARK 465 ASN A 971 REMARK 465 THR A 972 REMARK 465 VAL A 973 REMARK 465 GLY A 974 REMARK 465 ILE A 975 REMARK 465 PRO A 976 REMARK 465 ILE A 977 REMARK 465 GLY B 1194 REMARK 465 PRO B 1195 REMARK 465 SER B 1258 REMARK 465 SER B 1259 REMARK 465 GLY B 1260 REMARK 465 GLU B 1261 REMARK 465 ASN B 1262 REMARK 465 LEU B 1263 REMARK 465 TYR B 1264 REMARK 465 PHE B 1265 REMARK 465 GLN B 1266 REMARK 465 SER B 1267 REMARK 465 SER B 1268 REMARK 465 GLY B 1269 REMARK 465 SER B 1270 REMARK 465 SER B 1271 REMARK 465 GLY B 1272 REMARK 465 GLY B 898 REMARK 465 SER B 899 REMARK 465 SER B 900 REMARK 465 GLY B 901 REMARK 465 SER B 902 REMARK 465 GLU B 903 REMARK 465 GLY B 904 REMARK 465 VAL B 905 REMARK 465 PRO B 906 REMARK 465 VAL B 970 REMARK 465 ASN B 971 REMARK 465 THR B 972 REMARK 465 VAL B 973 REMARK 465 GLY B 974 REMARK 465 ILE B 975 REMARK 465 PRO B 976 REMARK 465 ILE B 977 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1198 CG CD OE1 OE2 REMARK 470 SER A1256 OG REMARK 470 GLN A 969 CG CD OE1 NE2 REMARK 470 LYS B1257 CG CD CE NZ REMARK 470 ARG B 908 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 968 CG OD1 OD2 REMARK 470 GLN B 969 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR B 931 71.04 -100.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1543 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH B1529 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B1530 DISTANCE = 5.92 ANGSTROMS DBREF 5ZRX A 1200 1257 UNP Q6P549 SHIP2_MOUSE 1200 1257 DBREF 5ZRX A 900 977 UNP Q03145 EPHA2_MOUSE 900 977 DBREF 5ZRX B 1200 1257 UNP Q6P549 SHIP2_MOUSE 1200 1257 DBREF 5ZRX B 900 977 UNP Q03145 EPHA2_MOUSE 900 977 SEQADV 5ZRX GLY A 1194 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX PRO A 1195 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX GLY A 1196 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX SER A 1197 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX GLU A 1198 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX PHE A 1199 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX SER A 1258 UNP Q6P549 LINKER SEQADV 5ZRX SER A 1259 UNP Q6P549 LINKER SEQADV 5ZRX GLY A 1260 UNP Q6P549 LINKER SEQADV 5ZRX GLU A 1261 UNP Q6P549 LINKER SEQADV 5ZRX ASN A 1262 UNP Q6P549 LINKER SEQADV 5ZRX LEU A 1263 UNP Q6P549 LINKER SEQADV 5ZRX TYR A 1264 UNP Q6P549 LINKER SEQADV 5ZRX PHE A 1265 UNP Q6P549 LINKER SEQADV 5ZRX GLN A 1266 UNP Q6P549 LINKER SEQADV 5ZRX SER A 1267 UNP Q6P549 LINKER SEQADV 5ZRX SER A 1268 UNP Q6P549 LINKER SEQADV 5ZRX GLY A 1269 UNP Q6P549 LINKER SEQADV 5ZRX SER A 1270 UNP Q6P549 LINKER SEQADV 5ZRX SER A 1271 UNP Q6P549 LINKER SEQADV 5ZRX GLY A 1272 UNP Q6P549 LINKER SEQADV 5ZRX GLY A 898 UNP Q6P549 LINKER SEQADV 5ZRX SER A 899 UNP Q6P549 LINKER SEQADV 5ZRX GLY B 1194 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX PRO B 1195 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX GLY B 1196 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX SER B 1197 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX GLU B 1198 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX PHE B 1199 UNP Q6P549 EXPRESSION TAG SEQADV 5ZRX SER B 1258 UNP Q6P549 LINKER SEQADV 5ZRX SER B 1259 UNP Q6P549 LINKER SEQADV 5ZRX GLY B 1260 UNP Q6P549 LINKER SEQADV 5ZRX GLU B 1261 UNP Q6P549 LINKER SEQADV 5ZRX ASN B 1262 UNP Q6P549 LINKER SEQADV 5ZRX LEU B 1263 UNP Q6P549 LINKER SEQADV 5ZRX TYR B 1264 UNP Q6P549 LINKER SEQADV 5ZRX PHE B 1265 UNP Q6P549 LINKER SEQADV 5ZRX GLN B 1266 UNP Q6P549 LINKER SEQADV 5ZRX SER B 1267 UNP Q6P549 LINKER SEQADV 5ZRX SER B 1268 UNP Q6P549 LINKER SEQADV 5ZRX GLY B 1269 UNP Q6P549 LINKER SEQADV 5ZRX SER B 1270 UNP Q6P549 LINKER SEQADV 5ZRX SER B 1271 UNP Q6P549 LINKER SEQADV 5ZRX GLY B 1272 UNP Q6P549 LINKER SEQADV 5ZRX GLY B 898 UNP Q6P549 LINKER SEQADV 5ZRX SER B 899 UNP Q6P549 LINKER SEQRES 1 A 159 GLY PRO GLY SER GLU PHE MET GLY ALA TRP LEU ARG ALA SEQRES 2 A 159 ILE GLY LEU GLU ARG TYR GLU GLU GLY LEU VAL HIS ASN SEQRES 3 A 159 GLY TRP ASP ASP LEU GLU PHE LEU SER ASP ILE THR GLU SEQRES 4 A 159 GLU ASP LEU GLU GLU ALA GLY VAL GLN ASP PRO ALA HIS SEQRES 5 A 159 LYS ARG LEU LEU LEU ASP THR LEU GLN LEU SER LYS SER SEQRES 6 A 159 SER GLY GLU ASN LEU TYR PHE GLN SER SER GLY SER SER SEQRES 7 A 159 GLY GLY SER SER GLY SER GLU GLY VAL PRO PHE ARG THR SEQRES 8 A 159 VAL SER GLU TRP LEU GLU SER ILE LYS MET GLN GLN TYR SEQRES 9 A 159 THR GLU HIS PHE MET VAL ALA GLY TYR THR ALA ILE GLU SEQRES 10 A 159 LYS VAL VAL GLN MET SER ASN GLU ASP ILE LYS ARG ILE SEQRES 11 A 159 GLY VAL ARG LEU PRO GLY HIS GLN LYS ARG ILE ALA TYR SEQRES 12 A 159 SER LEU LEU GLY LEU LYS ASP GLN VAL ASN THR VAL GLY SEQRES 13 A 159 ILE PRO ILE SEQRES 1 B 159 GLY PRO GLY SER GLU PHE MET GLY ALA TRP LEU ARG ALA SEQRES 2 B 159 ILE GLY LEU GLU ARG TYR GLU GLU GLY LEU VAL HIS ASN SEQRES 3 B 159 GLY TRP ASP ASP LEU GLU PHE LEU SER ASP ILE THR GLU SEQRES 4 B 159 GLU ASP LEU GLU GLU ALA GLY VAL GLN ASP PRO ALA HIS SEQRES 5 B 159 LYS ARG LEU LEU LEU ASP THR LEU GLN LEU SER LYS SER SEQRES 6 B 159 SER GLY GLU ASN LEU TYR PHE GLN SER SER GLY SER SER SEQRES 7 B 159 GLY GLY SER SER GLY SER GLU GLY VAL PRO PHE ARG THR SEQRES 8 B 159 VAL SER GLU TRP LEU GLU SER ILE LYS MET GLN GLN TYR SEQRES 9 B 159 THR GLU HIS PHE MET VAL ALA GLY TYR THR ALA ILE GLU SEQRES 10 B 159 LYS VAL VAL GLN MET SER ASN GLU ASP ILE LYS ARG ILE SEQRES 11 B 159 GLY VAL ARG LEU PRO GLY HIS GLN LYS ARG ILE ALA TYR SEQRES 12 B 159 SER LEU LEU GLY LEU LYS ASP GLN VAL ASN THR VAL GLY SEQRES 13 B 159 ILE PRO ILE FORMUL 3 HOH *273(H2 O) HELIX 1 AA1 GLY A 1196 ILE A 1207 1 12 HELIX 2 AA2 GLY A 1208 ARG A 1211 5 4 HELIX 3 AA3 TYR A 1212 ASN A 1219 1 8 HELIX 4 AA4 ASP A 1223 SER A 1228 1 6 HELIX 5 AA5 THR A 1231 ALA A 1238 1 8 HELIX 6 AA6 ASP A 1242 SER A 1256 1 15 HELIX 7 AA7 THR A 909 ILE A 917 1 9 HELIX 8 AA8 LYS A 918 GLN A 921 5 4 HELIX 9 AA9 TYR A 922 ALA A 929 1 8 HELIX 10 AB1 ALA A 933 VAL A 938 1 6 HELIX 11 AB2 SER A 941 ILE A 948 1 8 HELIX 12 AB3 LEU A 952 VAL A 970 1 19 HELIX 13 AB4 PHE B 1199 ILE B 1207 1 9 HELIX 14 AB5 GLY B 1208 ARG B 1211 5 4 HELIX 15 AB6 TYR B 1212 ASN B 1219 1 8 HELIX 16 AB7 ASP B 1223 ILE B 1230 5 8 HELIX 17 AB8 THR B 1231 ALA B 1238 1 8 HELIX 18 AB9 ASP B 1242 LEU B 1255 1 14 HELIX 19 AC1 THR B 909 ILE B 917 1 9 HELIX 20 AC2 LYS B 918 GLN B 921 5 4 HELIX 21 AC3 TYR B 922 ALA B 929 1 8 HELIX 22 AC4 ALA B 933 VAL B 938 1 6 HELIX 23 AC5 SER B 941 ILE B 948 1 8 HELIX 24 AC6 LEU B 952 GLN B 969 1 18 CRYST1 138.283 43.344 46.377 90.00 95.35 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007232 0.000000 0.000678 0.00000 SCALE2 0.000000 0.023071 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021657 0.00000