HEADER LYASE 07-MAY-18 5ZU5 TITLE CRYSTAL STRUCTURE OF A FULL LENGTH ALGINATE LYASE WITH CBM DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALGINATE LYASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO SPLENDIDUS; SOURCE 3 ORGANISM_TAXID: 29497; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALGINATE LYASE, PL7, CBM, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR W.LIU,Q.LYU,Z.LI REVDAT 2 22-NOV-23 5ZU5 1 REMARK REVDAT 1 27-JUN-18 5ZU5 0 JRNL AUTH Q.LYU,K.ZHANG,Q.ZHU,Z.LI,Y.LIU,E.FITZEK,T.YOHE,L.ZHAO,W.LI, JRNL AUTH 2 T.LIU,Y.YIN,W.LIU JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF A MULTIDOMAIN JRNL TITL 2 ALGINATE LYASE REVEALS A NOVEL ROLE OF CBM32 IN CAZYMES JRNL REF BIOCHIM. BIOPHYS. ACTA V.1862 1862 2018 JRNL REFN ISSN 0006-3002 JRNL PMID 29864445 JRNL DOI 10.1016/J.BBAGEN.2018.05.024 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 72697 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3846 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5284 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 289 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3791 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 588 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.090 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.061 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.706 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3936 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5356 ; 1.812 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 510 ; 7.250 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 194 ;33.988 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 630 ;12.728 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;18.139 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 579 ; 0.137 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3083 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1995 ; 1.327 ; 1.378 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2499 ; 1.961 ; 2.067 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1941 ; 2.044 ; 1.545 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6568 ; 4.744 ;12.760 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZU5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1300007674. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 R CDTE 300K-W REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76839 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4OZX,2JD9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NAAC, 0.1M TRIS, 25% PEG4000, PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.63600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.15150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.21050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.15150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.63600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.21050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -18 REMARK 465 PRO A -17 REMARK 465 PRO A -16 REMARK 465 ASP A -15 REMARK 465 LEU A -14 REMARK 465 GLY A -13 REMARK 465 THR A -12 REMARK 465 ASP A -11 REMARK 465 ASP A -10 REMARK 465 ASP A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ALA A -6 REMARK 465 MET A -5 REMARK 465 ALA A -4 REMARK 465 ASP A -3 REMARK 465 ILE A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 LYS A 494 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 1 CG OD1 OD2 REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 GLU A 10 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 794 O HOH A 1165 1.65 REMARK 500 O HOH A 713 O HOH A 1172 1.83 REMARK 500 O HOH A 1181 O HOH A 1245 2.12 REMARK 500 O HOH A 1242 O HOH A 1286 2.13 REMARK 500 O HOH A 718 O HOH A 1098 2.16 REMARK 500 O HOH A 1077 O HOH A 1284 2.17 REMARK 500 O HOH A 939 O HOH A 1078 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 30 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 118 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 280 NE - CZ - NH1 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 280 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 293 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 2 55.28 -140.49 REMARK 500 PRO A 3 -30.44 -39.48 REMARK 500 THR A 195 -55.76 -133.79 REMARK 500 LEU A 211 134.39 -36.06 REMARK 500 ASP A 330 -179.27 59.55 REMARK 500 ASP A 361 -165.05 -100.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1288 DISTANCE = 6.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 602 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 30 O REMARK 620 2 ASP A 33 OD1 79.5 REMARK 620 3 ASP A 35 O 168.6 99.7 REMARK 620 4 THR A 38 O 100.4 151.4 85.9 REMARK 620 5 THR A 38 OG1 99.6 76.3 91.2 75.5 REMARK 620 6 THR A 133 O 80.6 117.5 89.9 90.3 165.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 602 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE DATABASE FOR THIS PROTEIN DOES NOT CURRENTLY EXIST. REMARK 999 RESIDUES(-18)-0 ARE EXPRESSION TAGS. DBREF 5ZU5 A -18 494 PDB 5ZU5 5ZU5 -18 494 SEQRES 1 A 513 GLY PRO PRO ASP LEU GLY THR ASP ASP ASP ASP LYS ALA SEQRES 2 A 513 MET ALA ASP ILE ALA SER ASP PHE PRO ASN ASN LYS GLU SEQRES 3 A 513 THR GLY GLU ALA LEU LEU THR PRO VAL ASP ALA THR ALA SEQRES 4 A 513 SER SER HIS ASP GLY ASN GLY PRO ASP ARG LEU ILE ASP SEQRES 5 A 513 GLN ASP LEU THR THR ARG TRP SER SER ALA GLY ASP GLY SEQRES 6 A 513 GLU TRP ALA MET LEU ASP TYR GLY SER VAL GLN GLU PHE SEQRES 7 A 513 ASP ALA VAL GLN ALA SER PHE SER LYS GLY ASN GLU ARG SEQRES 8 A 513 GLN SER LYS PHE ASP ILE GLN VAL SER VAL ASP GLY GLU SEQRES 9 A 513 THR TRP THR THR VAL LEU GLU ASN GLN LEU SER SER GLY SEQRES 10 A 513 LYS ALA ILE GLY LEU GLU ARG PHE GLN PHE GLU PRO ALA SEQRES 11 A 513 VAL LYS ALA ARG TYR VAL ARG TYR VAL GLY HIS GLY ASN SEQRES 12 A 513 THR LYS ASN GLY TRP ASN SER VAL THR GLY LEU ALA ALA SEQRES 13 A 513 VAL ASN CYS SER ILE ASN ALA CYS PRO ALA SER GLN ILE SEQRES 14 A 513 ILE THR SER ASP VAL VAL ALA ALA GLU ALA VAL LEU ILE SEQRES 15 A 513 ALA GLU MET LYS ALA ALA GLU LYS ALA ARG LYS ALA ALA SEQRES 16 A 513 ARG LYS ASP LEU ARG SER GLY ASN PHE GLY VAL ALA ALA SEQRES 17 A 513 VAL TYR PRO CYS GLU THR SER VAL LYS CYS ASP THR ARG SEQRES 18 A 513 SER ALA LEU PRO VAL PRO THR GLY LEU PRO ALA THR PRO SEQRES 19 A 513 VAL ALA GLY ASN ALA PRO SER GLU ASN PHE ASP MET THR SEQRES 20 A 513 HIS TRP TYR LEU SER GLN PRO PHE ASP HIS ASP LYS ASN SEQRES 21 A 513 GLY LYS PRO ASP ASP VAL SER GLU TRP ASN LEU ALA ASN SEQRES 22 A 513 GLY TYR GLN HIS PRO GLU ILE PHE TYR THR ALA ASP ASP SEQRES 23 A 513 GLY GLY LEU VAL PHE LYS SER TYR VAL LYS GLY VAL ARG SEQRES 24 A 513 THR SER LYS ASN THR LYS TYR ALA ARG THR GLU LEU ARG SEQRES 25 A 513 GLU MET MET ARG ARG GLY ASP GLN SER ILE SER THR LYS SEQRES 26 A 513 GLY VAL ASN LYS ASN ASN TRP VAL PHE SER SER ALA PRO SEQRES 27 A 513 GLU ALA ASP LEU GLU ALA ALA ALA GLY ILE ASP GLY VAL SEQRES 28 A 513 LEU GLU ALA THR LEU LYS ILE ASP HIS ALA THR THR THR SEQRES 29 A 513 GLY ASN ALA ASN GLU VAL GLY ARG PHE ILE ILE GLY GLN SEQRES 30 A 513 ILE HIS ASP GLN ASN ASP GLU PRO ILE ARG LEU TYR TYR SEQRES 31 A 513 ARG LYS LEU PRO ASN GLN PRO THR GLY ALA VAL TYR PHE SEQRES 32 A 513 ALA HIS GLU SER GLN ASP ALA THR LYS GLU ASP PHE TYR SEQRES 33 A 513 PRO LEU VAL GLY ASP MET THR ALA GLU VAL GLY GLU ASP SEQRES 34 A 513 GLY ILE ALA LEU GLY GLU VAL PHE SER TYR ARG ILE ASP SEQRES 35 A 513 VAL LYS GLY ASN THR MET THR VAL THR LEU MET ARG GLU SEQRES 36 A 513 GLY LYS ASP ASP VAL VAL GLN VAL VAL ASP MET SER ASN SEQRES 37 A 513 SER GLY TYR ASP VAL GLY GLY LYS TYR MET TYR PHE LYS SEQRES 38 A 513 ALA GLY VAL TYR ASN GLN ASN ILE SER GLY ASP LEU ASP SEQRES 39 A 513 ASP TYR SER GLN ALA THR PHE TYR GLN LEU ASP VAL SER SEQRES 40 A 513 HIS ASP GLN TYR LYS LYS HET GOL A 601 6 HET NA A 602 1 HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 NA NA 1+ FORMUL 4 HOH *588(H2 O) HELIX 1 AA1 GLY A 27 ILE A 32 5 6 HELIX 2 AA2 PRO A 146 ILE A 150 5 5 HELIX 3 AA3 THR A 152 ARG A 177 1 26 HELIX 4 AA4 TYR A 191 SER A 196 1 6 HELIX 5 AA5 ALA A 220 PHE A 225 1 6 HELIX 6 AA6 SER A 248 ALA A 253 1 6 HELIX 7 AA7 PRO A 319 ALA A 326 1 8 SHEET 1 AA1 4 ASP A 17 ALA A 20 0 SHEET 2 AA1 4 TRP A 48 PHE A 66 -1 O MET A 50 N THR A 19 SHEET 3 AA1 4 TRP A 129 VAL A 138 -1 O VAL A 138 N ALA A 61 SHEET 4 AA1 4 TRP A 40 ALA A 43 -1 N TRP A 40 O VAL A 132 SHEET 1 AA2 5 ASP A 17 ALA A 20 0 SHEET 2 AA2 5 TRP A 48 PHE A 66 -1 O MET A 50 N THR A 19 SHEET 3 AA2 5 GLU A 104 ASN A 124 -1 O VAL A 117 N LEU A 51 SHEET 4 AA2 5 SER A 74 SER A 81 -1 N LYS A 75 O HIS A 122 SHEET 5 AA2 5 THR A 88 LEU A 95 -1 O GLN A 94 N PHE A 76 SHEET 1 AA3 8 ASP A 245 VAL A 247 0 SHEET 2 AA3 8 TRP A 230 GLN A 234 -1 N LEU A 232 O VAL A 247 SHEET 3 AA3 8 ARG A 289 GLU A 294 -1 O GLU A 291 N SER A 233 SHEET 4 AA3 8 TYR A 460 ASN A 467 -1 O ALA A 463 N LEU A 292 SHEET 5 AA3 8 ARG A 353 HIS A 360 -1 N ILE A 355 O TYR A 466 SHEET 6 AA3 8 ILE A 367 ARG A 372 -1 O LEU A 369 N GLY A 357 SHEET 7 AA3 8 ALA A 381 SER A 388 -1 O TYR A 383 N TYR A 370 SHEET 8 AA3 8 LYS A 393 VAL A 400 -1 O TYR A 397 N PHE A 384 SHEET 1 AA4 5 PHE A 262 THR A 264 0 SHEET 2 AA4 5 LEU A 270 TYR A 275 -1 O VAL A 271 N TYR A 263 SHEET 3 AA4 5 TYR A 477 ASP A 490 -1 O ALA A 480 N PHE A 272 SHEET 4 AA4 5 GLY A 328 HIS A 341 -1 N THR A 336 O TYR A 483 SHEET 5 AA4 5 TRP A 313 VAL A 314 1 N VAL A 314 O ASP A 330 SHEET 1 AA5 7 PHE A 262 THR A 264 0 SHEET 2 AA5 7 LEU A 270 TYR A 275 -1 O VAL A 271 N TYR A 263 SHEET 3 AA5 7 TYR A 477 ASP A 490 -1 O ALA A 480 N PHE A 272 SHEET 4 AA5 7 GLY A 328 HIS A 341 -1 N THR A 336 O TYR A 483 SHEET 5 AA5 7 PHE A 418 LYS A 425 -1 O VAL A 424 N GLY A 331 SHEET 6 AA5 7 THR A 428 ARG A 435 -1 O THR A 430 N ASP A 423 SHEET 7 AA5 7 VAL A 441 ASP A 446 -1 O VAL A 445 N MET A 429 SSBOND 1 CYS A 140 CYS A 145 1555 1555 2.05 SSBOND 2 CYS A 193 CYS A 199 1555 1555 2.06 LINK O ARG A 30 NA NA A 602 1555 1555 2.33 LINK OD1 ASP A 33 NA NA A 602 1555 1555 2.57 LINK O ASP A 35 NA NA A 602 1555 1555 2.34 LINK O THR A 38 NA NA A 602 1555 1555 2.57 LINK OG1 THR A 38 NA NA A 602 1555 1555 2.38 LINK O THR A 133 NA NA A 602 1555 1555 2.44 CISPEP 1 GLU A 109 PRO A 110 0 -2.00 SITE 1 AC1 8 GLY A 25 GLY A 27 ASP A 29 ARG A 30 SITE 2 AC1 8 PRO A 375 ASN A 376 HOH A 747 HOH A 879 SITE 1 AC2 5 ARG A 30 ASP A 33 ASP A 35 THR A 38 SITE 2 AC2 5 THR A 133 CRYST1 65.272 78.421 112.303 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015321 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012752 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008904 0.00000