HEADER TRANSFERASE 16-MAY-18 5ZWP TITLE CRYSTAL STRUCTURE OF THE DELTA-CLASS GLUTATHIONE TRANSFERASE FROM TITLE 2 MUSCA DOMESTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GST CLASS-THETA; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUSCA DOMESTICA; SOURCE 3 ORGANISM_COMMON: HOUSE FLY; SOURCE 4 ORGANISM_TAXID: 7370; SOURCE 5 GENE: GST1, GST-1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ISOZYME, DETOXIFICATION, HOUSEFLY, GST, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SUE,S.YAJIMA REVDAT 3 22-NOV-23 5ZWP 1 REMARK REVDAT 2 20-JUN-18 5ZWP 1 JRNL REVDAT 1 13-JUN-18 5ZWP 0 JRNL AUTH M.SUE,S.YAJIMA JRNL TITL CRYSTAL STRUCTURE OF THE DELTA-CLASS GLUTATHIONE TRANSFERASE JRNL TITL 2 IN MUSCA DOMESTICA JRNL REF BIOCHEM. BIOPHYS. RES. V. 502 345 2018 JRNL REF 2 COMMUN. JRNL REFN ESSN 1090-2104 JRNL PMID 29803675 JRNL DOI 10.1016/J.BBRC.2018.05.161 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 80001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4217 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5571 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.1840 REMARK 3 BIN FREE R VALUE SET COUNT : 298 REMARK 3 BIN FREE R VALUE : 0.2120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3334 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 73 REMARK 3 SOLVENT ATOMS : 486 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.50000 REMARK 3 B22 (A**2) : 1.11000 REMARK 3 B33 (A**2) : -0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.056 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.056 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.033 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.585 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3524 ; 0.015 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 3228 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4751 ; 1.912 ; 1.669 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7549 ; 2.162 ; 1.653 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 412 ; 5.497 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;35.238 ;23.625 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 594 ;12.581 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;20.812 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 434 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3871 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 729 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1654 ; 0.712 ; 0.759 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1655 ; 0.712 ; 0.760 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2064 ; 1.101 ; 1.140 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2065 ; 1.101 ; 1.140 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1870 ; 1.420 ; 0.928 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1845 ; 1.415 ; 0.914 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2688 ; 2.131 ; 1.310 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4255 ; 3.479 ;10.091 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4255 ; 3.479 ;10.091 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 207 REMARK 3 RESIDUE RANGE : A 301 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): 3.6670 39.3253 28.0745 REMARK 3 T TENSOR REMARK 3 T11: 0.0248 T22: 0.0027 REMARK 3 T33: 0.0100 T12: -0.0014 REMARK 3 T13: -0.0028 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.0777 L22: 0.0408 REMARK 3 L33: 0.2637 L12: -0.0099 REMARK 3 L13: 0.0333 L23: -0.0558 REMARK 3 S TENSOR REMARK 3 S11: 0.0053 S12: 0.0042 S13: 0.0039 REMARK 3 S21: -0.0303 S22: 0.0021 S23: 0.0078 REMARK 3 S31: 0.0281 S32: -0.0199 S33: -0.0073 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 207 REMARK 3 RESIDUE RANGE : B 301 B 301 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8136 46.2212 46.0967 REMARK 3 T TENSOR REMARK 3 T11: 0.0196 T22: 0.0095 REMARK 3 T33: 0.0096 T12: -0.0024 REMARK 3 T13: 0.0003 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.1379 L22: 0.0432 REMARK 3 L33: 0.1514 L12: -0.0359 REMARK 3 L13: 0.0443 L23: 0.0035 REMARK 3 S TENSOR REMARK 3 S11: -0.0053 S12: -0.0136 S13: 0.0147 REMARK 3 S21: 0.0122 S22: -0.0008 S23: -0.0121 REMARK 3 S31: -0.0028 S32: 0.0242 S33: 0.0061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5ZWP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1300007797. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84246 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 49.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.11500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1JLV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CITRATE, PH 5.6, 1.8 M REMARK 280 AMMONIUM SULFATE, 0.1 M TARTRATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.45450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 208 REMARK 465 GLY B 208 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG2 GSH A 301 O HOH A 604 2.06 REMARK 500 SG2 GSH B 301 O HOH B 605 2.14 REMARK 500 O HOH B 479 O HOH B 578 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 521 O HOH B 550 1554 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 42 CD GLU A 42 OE1 0.169 REMARK 500 GLU A 195 CD GLU A 195 OE1 0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 29 CD - CE - NZ ANGL. DEV. = 14.0 DEGREES REMARK 500 MET B 69 CG - SD - CE ANGL. DEV. = -11.1 DEGREES REMARK 500 LYS B 88 CD - CE - NZ ANGL. DEV. = -16.4 DEGREES REMARK 500 ASP B 110 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 64 108.02 74.83 REMARK 500 PHE A 83 76.16 -157.52 REMARK 500 THR A 103 -63.35 -123.41 REMARK 500 SER A 170 22.30 80.47 REMARK 500 GLU B 64 107.38 75.88 REMARK 500 PHE B 83 75.81 -153.24 REMARK 500 THR B 103 -59.48 -124.47 REMARK 500 SER B 170 17.69 82.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 643 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH B 644 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 645 DISTANCE = 6.30 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 306 DBREF 5ZWP A 1 208 UNP P28338 GSTT1_MUSDO 1 208 DBREF 5ZWP B 1 208 UNP P28338 GSTT1_MUSDO 1 208 SEQADV 5ZWP ILE A 173 UNP P28338 PHE 173 ENGINEERED MUTATION SEQADV 5ZWP ILE B 173 UNP P28338 PHE 173 ENGINEERED MUTATION SEQRES 1 A 208 MET ASP PHE TYR TYR LEU PRO GLY SER ALA PRO CYS ARG SEQRES 2 A 208 SER VAL LEU MET THR ALA LYS ALA LEU GLY ILE GLU LEU SEQRES 3 A 208 ASN LYS LYS LEU LEU ASN LEU GLN ALA GLY GLU HIS LEU SEQRES 4 A 208 LYS PRO GLU PHE LEU LYS ILE ASN PRO GLN HIS THR ILE SEQRES 5 A 208 PRO THR LEU VAL ASP GLY ASP PHE ALA LEU TRP GLU SER SEQRES 6 A 208 ARG ALA ILE MET VAL TYR LEU VAL GLU LYS TYR GLY LYS SEQRES 7 A 208 THR ASP SER LEU PHE PRO LYS CYS PRO LYS LYS ARG ALA SEQRES 8 A 208 VAL ILE ASN GLN ARG LEU TYR PHE ASP MET GLY THR LEU SEQRES 9 A 208 TYR LYS SER PHE ALA ASP TYR TYR TYR PRO GLN ILE PHE SEQRES 10 A 208 ALA LYS ALA PRO ALA ASP PRO GLU LEU PHE LYS LYS ILE SEQRES 11 A 208 GLU THR ALA PHE ASP PHE LEU ASN THR PHE LEU LYS GLY SEQRES 12 A 208 HIS GLU TYR ALA ALA GLY ASP SER LEU THR VAL ALA ASP SEQRES 13 A 208 LEU ALA LEU LEU ALA SER VAL SER THR PHE GLU VAL ALA SEQRES 14 A 208 SER PHE ASP ILE SER LYS TYR PRO ASN VAL ALA LYS TRP SEQRES 15 A 208 TYR ALA ASN LEU LYS THR VAL ALA PRO GLY TRP GLU GLU SEQRES 16 A 208 ASN TRP ALA GLY CYS LEU GLU PHE LYS LYS TYR PHE GLY SEQRES 1 B 208 MET ASP PHE TYR TYR LEU PRO GLY SER ALA PRO CYS ARG SEQRES 2 B 208 SER VAL LEU MET THR ALA LYS ALA LEU GLY ILE GLU LEU SEQRES 3 B 208 ASN LYS LYS LEU LEU ASN LEU GLN ALA GLY GLU HIS LEU SEQRES 4 B 208 LYS PRO GLU PHE LEU LYS ILE ASN PRO GLN HIS THR ILE SEQRES 5 B 208 PRO THR LEU VAL ASP GLY ASP PHE ALA LEU TRP GLU SER SEQRES 6 B 208 ARG ALA ILE MET VAL TYR LEU VAL GLU LYS TYR GLY LYS SEQRES 7 B 208 THR ASP SER LEU PHE PRO LYS CYS PRO LYS LYS ARG ALA SEQRES 8 B 208 VAL ILE ASN GLN ARG LEU TYR PHE ASP MET GLY THR LEU SEQRES 9 B 208 TYR LYS SER PHE ALA ASP TYR TYR TYR PRO GLN ILE PHE SEQRES 10 B 208 ALA LYS ALA PRO ALA ASP PRO GLU LEU PHE LYS LYS ILE SEQRES 11 B 208 GLU THR ALA PHE ASP PHE LEU ASN THR PHE LEU LYS GLY SEQRES 12 B 208 HIS GLU TYR ALA ALA GLY ASP SER LEU THR VAL ALA ASP SEQRES 13 B 208 LEU ALA LEU LEU ALA SER VAL SER THR PHE GLU VAL ALA SEQRES 14 B 208 SER PHE ASP ILE SER LYS TYR PRO ASN VAL ALA LYS TRP SEQRES 15 B 208 TYR ALA ASN LEU LYS THR VAL ALA PRO GLY TRP GLU GLU SEQRES 16 B 208 ASN TRP ALA GLY CYS LEU GLU PHE LYS LYS TYR PHE GLY HET GSH A 301 20 HET FMT A 302 3 HET FMT A 303 3 HET FMT A 304 3 HET FMT A 305 3 HET FMT A 306 3 HET FMT A 307 3 HET GSH B 301 20 HET FMT B 302 3 HET FMT B 303 3 HET FMT B 304 3 HET FMT B 305 3 HET FMT B 306 3 HETNAM GSH GLUTATHIONE HETNAM FMT FORMIC ACID FORMUL 3 GSH 2(C10 H17 N3 O6 S) FORMUL 4 FMT 11(C H2 O2) FORMUL 16 HOH *486(H2 O) HELIX 1 AA1 SER A 9 LEU A 22 1 14 HELIX 2 AA2 GLY A 36 LEU A 39 5 4 HELIX 3 AA3 LYS A 40 ASN A 47 1 8 HELIX 4 AA4 GLU A 64 GLY A 77 1 14 HELIX 5 AA5 CYS A 86 THR A 103 1 18 HELIX 6 AA6 THR A 103 LYS A 119 1 17 HELIX 7 AA7 ASP A 123 LEU A 141 1 19 HELIX 8 AA8 THR A 153 ALA A 169 1 17 HELIX 9 AA9 ASP A 172 LYS A 175 5 4 HELIX 10 AB1 TYR A 176 ALA A 190 1 15 HELIX 11 AB2 GLY A 192 LYS A 205 1 14 HELIX 12 AB3 SER B 9 LEU B 22 1 14 HELIX 13 AB4 GLY B 36 LEU B 39 5 4 HELIX 14 AB5 LYS B 40 ASN B 47 1 8 HELIX 15 AB6 GLU B 64 GLY B 77 1 14 HELIX 16 AB7 CYS B 86 THR B 103 1 18 HELIX 17 AB8 THR B 103 LYS B 119 1 17 HELIX 18 AB9 ASP B 123 LEU B 141 1 19 HELIX 19 AC1 THR B 153 ALA B 169 1 17 HELIX 20 AC2 ASP B 172 LYS B 175 5 4 HELIX 21 AC3 TYR B 176 ALA B 190 1 15 HELIX 22 AC4 GLY B 192 LYS B 205 1 14 SHEET 1 AA1 4 ASN A 27 LEU A 30 0 SHEET 2 AA1 4 ASP A 2 TYR A 5 1 N PHE A 3 O LYS A 29 SHEET 3 AA1 4 THR A 54 ASP A 57 -1 O THR A 54 N TYR A 4 SHEET 4 AA1 4 PHE A 60 TRP A 63 -1 O LEU A 62 N LEU A 55 SHEET 1 AA2 4 ASN B 27 LEU B 30 0 SHEET 2 AA2 4 ASP B 2 TYR B 5 1 N PHE B 3 O LYS B 29 SHEET 3 AA2 4 THR B 54 ASP B 57 -1 O THR B 54 N TYR B 4 SHEET 4 AA2 4 PHE B 60 TRP B 63 -1 O LEU B 62 N LEU B 55 CISPEP 1 ILE A 52 PRO A 53 0 0.44 CISPEP 2 ILE B 52 PRO B 53 0 -4.53 SITE 1 AC1 18 LEU A 33 HIS A 38 HIS A 50 THR A 51 SITE 2 AC1 18 ILE A 52 PRO A 53 GLU A 64 SER A 65 SITE 3 AC1 18 ARG A 66 FMT A 302 HOH A 441 HOH A 457 SITE 4 AC1 18 HOH A 489 HOH A 496 HOH A 519 HOH A 539 SITE 5 AC1 18 HOH A 548 HOH A 604 SITE 1 AC2 8 PRO A 11 TYR A 105 TYR A 113 GSH A 301 SITE 2 AC2 8 HOH A 422 HOH A 451 HOH A 555 HOH A 570 SITE 1 AC3 5 MET A 101 GLY A 102 HOH A 418 MET B 101 SITE 2 AC3 5 GLY B 102 SITE 1 AC4 6 THR A 103 LYS A 106 SER A 107 HOH A 419 SITE 2 AC4 6 HOH A 445 HOH A 464 SITE 1 AC5 4 THR A 139 PHE A 140 LYS A 142 HOH A 402 SITE 1 AC6 6 TRP A 193 TRP A 197 HOH A 416 HOH A 429 SITE 2 AC6 6 HOH A 470 HOH A 473 SITE 1 AC7 5 LYS A 89 GLY A 149 ASP A 150 SER A 151 SITE 2 AC7 5 LYS B 119 SITE 1 AC8 17 LEU B 33 HIS B 38 HIS B 50 THR B 51 SITE 2 AC8 17 ILE B 52 PRO B 53 GLU B 64 SER B 65 SITE 3 AC8 17 ARG B 66 MET B 101 HOH B 469 HOH B 470 SITE 4 AC8 17 HOH B 480 HOH B 493 HOH B 518 HOH B 548 SITE 5 AC8 17 HOH B 605 SITE 1 AC9 5 LEU B 6 LEU B 33 GLN B 34 HOH B 407 SITE 2 AC9 5 HOH B 475 SITE 1 AD1 5 PRO A 48 ARG B 96 PHE B 140 HOH B 514 SITE 2 AD1 5 HOH B 535 SITE 1 AD2 6 LYS A 119 LYS B 89 GLY B 149 ASP B 150 SITE 2 AD2 6 SER B 151 HOH B 417 SITE 1 AD3 6 TRP B 193 TRP B 197 HOH B 420 HOH B 432 SITE 2 AD3 6 HOH B 435 HOH B 496 SITE 1 AD4 4 MET B 1 TYR B 76 HOH B 404 HOH B 447 CRYST1 51.260 90.909 51.418 90.00 107.56 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019508 0.000000 0.006173 0.00000 SCALE2 0.000000 0.011000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020399 0.00000