HEADER SUGAR BINDING PROTEIN 02-JUN-18 5ZZK TITLE A CON ARTIST: PHENYLPHENOXYBENZAMIDE IS NOT A GLYCOSYLTRANSFERASE TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOFUNCTIONAL GLYCOSYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MGT,PEPTIDOGLYCAN TGASE; COMPND 5 EC: 2.4.1.129; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 STRAIN: MU50 / ATCC 700699; SOURCE 5 GENE: MGT, SAV1874; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSYLTRANSFERASE MEMBRANE ASSOCIATED ENZYME LIPID II KEYWDS 2 POLYMERIZATION PBP CLASS A, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.G.WYBENGA REVDAT 3 22-NOV-23 5ZZK 1 JRNL REVDAT 2 02-JAN-19 5ZZK 1 JRNL REVDAT 1 20-JUN-18 5ZZK 0 JRNL AUTH G.G.WYBENGA,W.S.WU JRNL TITL A CON ARTIST: PHENYLPHENOXYBENZAMIDE IS NOT A JRNL TITL 2 GLYCOSYLTRANSFERASE INHIBITOR JRNL REF BIORXIV 2018 JRNL REFN ISSN 2692-8205 JRNL DOI 10.1101/292912 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.6 REMARK 3 NUMBER OF REFLECTIONS : 8281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.327 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 465 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 138 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 19.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 3 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1497 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.99000 REMARK 3 B22 (A**2) : 2.30000 REMARK 3 B33 (A**2) : -0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.572 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.400 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.246 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.618 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.841 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.702 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1525 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1337 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2057 ; 2.142 ; 1.919 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3113 ; 1.238 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 179 ; 6.872 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;40.314 ;25.412 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 270 ;21.154 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ; 9.460 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 225 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1695 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 314 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 53 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): -19.5990 15.0000 -13.4800 REMARK 3 T TENSOR REMARK 3 T11: 0.4012 T22: 0.2506 REMARK 3 T33: 0.4336 T12: 0.0930 REMARK 3 T13: 0.1259 T23: 0.0791 REMARK 3 L TENSOR REMARK 3 L11: 4.4306 L22: 0.3719 REMARK 3 L33: 1.7822 L12: 0.1352 REMARK 3 L13: 0.5749 L23: 0.2918 REMARK 3 S TENSOR REMARK 3 S11: -0.0362 S12: 0.1263 S13: -0.2454 REMARK 3 S21: -0.0846 S22: 0.0396 S23: -0.3699 REMARK 3 S31: 0.2824 S32: 0.6436 S33: -0.0034 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 133 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): -21.1450 13.2580 -9.4140 REMARK 3 T TENSOR REMARK 3 T11: 0.3080 T22: 0.3519 REMARK 3 T33: 0.4690 T12: 0.2332 REMARK 3 T13: 0.1169 T23: 0.1022 REMARK 3 L TENSOR REMARK 3 L11: 5.9050 L22: 1.7346 REMARK 3 L33: 10.8503 L12: 0.7719 REMARK 3 L13: 7.8494 L23: 0.2554 REMARK 3 S TENSOR REMARK 3 S11: -0.1364 S12: 0.0662 S13: -0.1929 REMARK 3 S21: 0.1424 S22: -0.0069 S23: -0.7596 REMARK 3 S31: -0.1337 S32: 0.2211 S33: 0.1433 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 268 REMARK 3 ORIGIN FOR THE GROUP (A): -33.1540 22.9560 -12.4870 REMARK 3 T TENSOR REMARK 3 T11: 0.2103 T22: 0.0436 REMARK 3 T33: 0.0699 T12: 0.0054 REMARK 3 T13: 0.0112 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.4777 L22: 2.4628 REMARK 3 L33: 2.5651 L12: 0.5344 REMARK 3 L13: -0.1666 L23: -0.3120 REMARK 3 S TENSOR REMARK 3 S11: -0.0576 S12: 0.1625 S13: 0.0293 REMARK 3 S21: -0.0218 S22: -0.0438 S23: -0.1526 REMARK 3 S31: 0.0069 S32: 0.1151 S33: 0.1013 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5ZZK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300007295. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97622 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8774 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 51.0 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 51.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3VMQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MGCL2, 100 MM NA HEPES PH 8, REMARK 280 AND 16 % WT/VOL PEG400 (SIGMA), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 278.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 76.94000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.82000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 76.94000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 19.82000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 24 REMARK 465 SER A 25 REMARK 465 HIS A 26 REMARK 465 MET A 27 REMARK 465 GLN A 28 REMARK 465 PRO A 29 REMARK 465 VAL A 30 REMARK 465 GLY A 31 REMARK 465 LYS A 32 REMARK 465 PRO A 33 REMARK 465 PRO A 34 REMARK 465 LYS A 35 REMARK 465 LYS A 36 REMARK 465 LYS A 37 REMARK 465 LYS A 38 REMARK 465 SER A 39 REMARK 465 LYS A 40 REMARK 465 ARG A 41 REMARK 465 ILE A 42 REMARK 465 LEU A 43 REMARK 465 LEU A 44 REMARK 465 LYS A 45 REMARK 465 ILE A 46 REMARK 465 LEU A 47 REMARK 465 LEU A 48 REMARK 465 THR A 49 REMARK 465 ILE A 50 REMARK 465 LEU A 51 REMARK 465 ILE A 52 REMARK 465 GLY A 109 REMARK 465 PHE A 110 REMARK 465 ASP A 111 REMARK 465 LEU A 112 REMARK 465 LYS A 113 REMARK 465 GLY A 114 REMARK 465 THR A 115 REMARK 465 THR A 116 REMARK 465 ARG A 117 REMARK 465 ALA A 118 REMARK 465 LEU A 119 REMARK 465 PHE A 120 REMARK 465 SER A 121 REMARK 465 THR A 122 REMARK 465 ILE A 123 REMARK 465 SER A 124 REMARK 465 ASP A 125 REMARK 465 ARG A 126 REMARK 465 ASP A 127 REMARK 465 VAL A 128 REMARK 465 GLN A 129 REMARK 465 GLY A 130 REMARK 465 GLY A 131 REMARK 465 SER A 132 REMARK 465 ASP A 145 REMARK 465 ASN A 146 REMARK 465 ASP A 147 REMARK 465 ARG A 148 REMARK 465 SER A 149 REMARK 465 PHE A 150 REMARK 465 THR A 151 REMARK 465 ARG A 152 REMARK 465 LYS A 153 REMARK 465 VAL A 154 REMARK 465 ARG A 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 71 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 VAL A 228 CB - CA - C ANGL. DEV. = -14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 101 73.76 -159.57 REMARK 500 ASN A 179 74.11 -153.42 REMARK 500 ASN A 185 32.98 75.48 REMARK 500 SER A 209 132.47 -37.71 REMARK 500 ASN A 233 81.41 -158.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VMQ RELATED DB: PDB DBREF 5ZZK A 28 269 UNP Q99T05 MGT_STAAM 28 269 SEQADV 5ZZK GLY A 24 UNP Q99T05 EXPRESSION TAG SEQADV 5ZZK SER A 25 UNP Q99T05 EXPRESSION TAG SEQADV 5ZZK HIS A 26 UNP Q99T05 EXPRESSION TAG SEQADV 5ZZK MET A 27 UNP Q99T05 EXPRESSION TAG SEQRES 1 A 246 GLY SER HIS MET GLN PRO VAL GLY LYS PRO PRO LYS LYS SEQRES 2 A 246 LYS LYS SER LYS ARG ILE LEU LEU LYS ILE LEU LEU THR SEQRES 3 A 246 ILE LEU ILE ILE ILE ALA LEU PHE ILE GLY ILE MET TYR SEQRES 4 A 246 PHE LEU SER THR ARG ASP ASN VAL ASP GLU LEU ARG LYS SEQRES 5 A 246 ILE GLU ASN LYS SER SER PHE VAL SER ALA ASP ASN MET SEQRES 6 A 246 PRO GLU TYR VAL LYS GLY ALA PHE ILE SER MET GLU ASP SEQRES 7 A 246 GLU ARG PHE TYR ASN HIS HIS GLY PHE ASP LEU LYS GLY SEQRES 8 A 246 THR THR ARG ALA LEU PHE SER THR ILE SER ASP ARG ASP SEQRES 9 A 246 VAL GLN GLY GLY SER THR ILE THR GLN GLN VAL VAL LYS SEQRES 10 A 246 ASN TYR PHE TYR ASP ASN ASP ARG SER PHE THR ARG LYS SEQRES 11 A 246 VAL LYS GLU LEU PHE VAL ALA HIS ARG VAL GLU LYS GLN SEQRES 12 A 246 TYR ASN LYS ASN GLU ILE LEU SER PHE TYR LEU ASN ASN SEQRES 13 A 246 ILE TYR PHE GLY ASP ASN GLN TYR THR LEU GLU GLY ALA SEQRES 14 A 246 ALA ASN HIS TYR PHE GLY THR THR VAL ASN LYS ASN SER SEQRES 15 A 246 THR THR MET SER HIS ILE THR VAL LEU GLN SER ALA ILE SEQRES 16 A 246 LEU ALA SER LYS VAL ASN ALA PRO SER VAL TYR ASN ILE SEQRES 17 A 246 ASN ASN MET SER GLU ASN PHE THR GLN ARG VAL SER THR SEQRES 18 A 246 ASN LEU GLU LYS MET LYS GLN GLN ASN TYR ILE ASN GLU SEQRES 19 A 246 THR GLN TYR GLN GLN ALA MET SER GLN LEU ASN ARG FORMUL 2 HOH *6(H2 O) HELIX 1 AA1 ILE A 53 ASP A 68 1 16 HELIX 2 AA2 VAL A 70 GLU A 77 5 8 HELIX 3 AA3 SER A 84 MET A 88 5 5 HELIX 4 AA4 PRO A 89 ASP A 101 1 13 HELIX 5 AA5 ILE A 134 TYR A 144 1 11 HELIX 6 AA6 GLU A 156 TYR A 167 1 12 HELIX 7 AA7 ASN A 168 ASN A 178 1 11 HELIX 8 AA8 THR A 188 GLY A 198 1 11 HELIX 9 AA9 THR A 212 VAL A 223 1 12 HELIX 10 AB1 ASN A 230 MET A 234 5 5 HELIX 11 AB2 SER A 235 GLN A 252 1 18 HELIX 12 AB3 ASN A 256 ASN A 268 1 13 CRYST1 153.880 39.640 55.830 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006499 0.000000 0.000000 0.00000 SCALE2 0.000000 0.025227 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017912 0.00000